Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
Os04g0127500 | OGI:04002230 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:1723217-1727297 | ||||||||
Gene Symbol | WAK29, OsWAK29 | ||||||||||
DNA seq | GAAGATCTCGACAGTCAGATTGCTTTTAGGGGAATATGCAAAAAGGATTGCTCGACAGTCTCAGACCACCATGGGACCTGTGCTGCTGTGCCTAGCCATCGCCGCCGCCACCGCCGTGTGCGCAGCATCATCAGGAGCACCACCATCTCCCGATGCGGCGGCCGTCGCCGTTGGTAGCTGCCCCACGTACTCCGGATCAGGTTACTCTTCTGCATCTGACGGCGGCAACCAAGGTATATATAGACAAAGTTTTATACATACTTGAAATGATTAGATTCTGAAATCGTTGGTTGCTGTCTTGTGGATAGAAAGCAAATAAATATACTTAGGAGAAGTTCAATTTTTTTCAGATCATTATTTACGAACATATTTAACAGGGGAAATATCATGTGAAGATAAGAGTGTTTGAAAACTCGTGAAAATCATACTTAAATGTTTTCTAAATTCAAGAAAACATTACAAGAGATAGACATAAATATTAAATACACTTACCAAATCTAAAGTCCAAACTCAACTTTATTTGAGAGTAAAAAAAAACAAATTTCTGGTGAATAGTATCTTGTTCCTATTCATCCGAAAGTTGAGATTTGGTAAGAATGTATTTTATATCTACACCTATCTCTAGTAATTTTTTCATGTATTTACAAAACTTTTAGGTATGATTTTTACGAGTTTTCGATACTTAGCTCGTTGTCACCTGATATATATGTCCTCGATTTCAAATGCCATGTATGTTCAAAGTTTGGAGTTTTAGTAGTAGTGTTTTTGTTTCTTTTATTACATTACCAATTGTATATGTTGTTTCAAATAAGAAAACATACTTCAGTTCCAAACTTTAGAACAGTATGTGGCATCAAATAGACTTTCAATACTAACAAAATATCCATTTACGACGTGCGCCTTTACATGGGTGGACCTCAAGCCCTCAATCCCCATACATTCGTATGTATAGGCGAATATTTTGAACTAAAATCTGCCTATCCACTTGGATGAGCAGGGATTTTGACTAATAAGGCCTATATCAAGTACCATTAAATAATAATATAATACATAATATAAAGTTTAGGGAAATTAGTGCATCATGAAAATATATCTATTCAACAATGCAAACCAGAAAGTCTCTTGCCACATCTATGTAAAAAAATGAGCAGGGGAACCAGATAATATACATATTGGGGATCTGGAGTTAAGTTTTACTGTATCTTTCATACCGTCCATATATATATATACAACGTTCTAATGTAATTCTCTTTTATGAAAAATGTTCTAATGTAATTGATATATACTAAAATTGTTCATTGACATCTATAGTTCCATTTTGTACGACTGTAAAACCTTTTGTTTTACTTGTTCTAAAAGAAATCTTTCTTGTACCTTTTGGAACCAAGTTGTTTATCATATTTTCTTCAGCCAGGTTAATTGAAAGTCTGAATTGCTTATTAACCTTATTTAGCTATTCTTTTGCAATTTTCTATCATACATATGTCTAACATCACTTTTTATTGTTAATATTTCTTAACAGAAGAGTATGATCCCAATAAAGAAAATCCGTGTAAACGGTCATGTGGCTCTATGTCCATTCCTTTCCCATTCGCTCTTCTATCCGCATGCTCTGGCAGTAAAAGATTTCTCCTAAACTGTACATCAAATAAAACACTTATCGGAATTCCGCCAGCGCAATATCAGGTGATAAATATATCATTAGACGATGGTGTCCTATTTGTGAACAAGCCCTCAAACCTTGGAGATATCATCACAACGCCAACGGTGGCAAACGAGTTACATGACTTCGACTTCTCTGGGAGCCAAGGCATTTGGAGATGGGCTGTCGCCAATCAAACATGTCACACAGCGAGAACTGATCAGCTATCGTACGCTTGCGTGAGCAACAACAGTTTGTGTGTTCATAGATCTACTGGCTACCATTGCAAGTGCTCTTTGGGCTACGGAGGAAATGCCTATATCGAAGATGGCTGTGAGGGTATGCTGTCTCTGATAAGCTTGATCGCTATCGTATTTACTATCTGACTGTTTTAAGGTACACCAAATTGTTTTACTCTTGCCTCATAGGTGGTAAGATGACATATATTAACATTTGAAGCGTACTAATATCAGTTATTGCATTCCAATTATGAAAGAAACATTGTTTTCTTATTTTATTAATGTGTAGAAATTTGAATTATATGTAATATATAGACCAGTAAATTCTAAATTTTAAATAAAATTTCAATATCCATGTTGTAATTTTAAAATGAATTTCAAATTTATACCCTAAAATGGCTCTTTACTATTTCATCACTCCTCGGTTGTACAGATAGCAGAGGTTCATTATGACAAAAAAAAACTGTTTTTTATACTAAATCAACTAAGCAAACAAATTTTGTAGAAAAAACAAAAAGTAATTAAGAGAACCAGCATGTTATACTATCTACTTCAACTGATCACGTTTGATTACGTATGTACTCTGCAGATATTGATGAGTGTAGTCTACCCAACTTTTGTAATGGAAATTGCCAGAACTTCCTAGGGAGCTACAGGTGCTCACATTGCCCTCGTGGTTCAATTTTTGATCCTGCTAAACGTGTATGCATATATGGACATGGCCTTCATCCAGCTGGTATGTGATACCTCTCTTTTATTGACAAAATAAGTTTGCCATGAAAAGTAGTGAAATGTAACTCCAAGTATATTCATCTGTGTTACAGGTCTTCTAATTGGACTTAGCTGTGGTATTGGAGTCCTTTTTCTTGTAGTAGGTCTAATTTTATTTGTTCGAAGGTGGAGGAGACATATGCAAAGAAAAATTAGAAGGGAATACTTCCAAAAAAACAAAGGCCTCCTACTTGAACAATTGATGTCGTCTGATGAAAATGTAGCACATGATCCAAAAATATTTTCCTTGGAAGAGCTAGAGAAGGCAACAGACAACTTTCATTCAACACGTATTCTTGGCTGTGGAGGCCATGGCACTGTATACAAGGGAATTTTGTTAGATCAACGCGTGGTTGCTATTAAGAAATCCAGAATTGTGGAGCAGAACGAAATTGATCAATTTATCAATGAGGTTGCCATCTTGTCTCAAATTGTTCATCGGAATGTGGTAAAACTTTTTGGTTGTTGCCTTGTATCAAAGGTACCTTTACTTGTGTATGAGTTCATCTCCAATGGTACATTATATGATCTTCTTCATGGTGAACAGAGTACAACATTCTCATTAACGTGGGAAGATTCTATCAGAATTTCACTTGAGGTTGCAAGTGCTCTTTCTTACCTCCACTCTGCTGCATCAATACCCATATTCCATAGAGATGTGAAATCAGCCAATATACTCTTAAACGACAATTACACTTCGAAGGTTTCAGACTTTGGCGCGTCAAGATCCATCTCCATTGACGAAACTCGTGTGGTGACAATTGTACAAGGGACATTTGGGTATTTGGATCCTGAATACTTCCATACATGCCAACTAACTGAGAAAAGTGATGTTTACAGCTTTGGTGTTATACTTGTTGAGATCCTAACAAGGAAGAAGCCTATCATAGTAAATTGTTTCGGTGAAAACCAAAACCTAGGTCATTGCTTTCTTCAAACACTACAACATGGAACAATCATGGAAATAGTGGATCCCCAAATTGCTAAGGAAGCAAATGAAAGTGAAATAAACGAAATGGCATCGCTTGCAGAAATATGTTTACGAATCAGAGGAGAAGAAAGGCCTAAAATGAAAGAGGTGGAGTTAAGGCTGCAGCTCCTAAGAGCTATGATAACTGAGAGAAGCCGTCAGGAGTTACTAAGGAACAATGGAATTGGGCCATCAGTACAATCCAATTCCAGCACTACATCTGTGACCAGGAGTGTTGTGCTTCGTGCAGGTATTGGCATATCCACTGATCAGGATGCAACTCGTTGCTATACCATGGAGCAAGAGCTCGTTTCTTGGACAGATCTACCGCGCTAAACTGTACTACTCTATCTTTTATGAGACATCACAAACTATTCTCTGCCGTCTTTTTCTGGACTGTTTCCTTTTAGCGTGTGAAAAAAAAACAGATTAACTTTTTGAATGTTTGTTGGTTTAGTG
More
|
||||||||||
CDS seq | ATGGGACCTGTGCTGCTGTGCCTAGCCATCGCCGCCGCCACCGCCGTGTGCGCAGCATCATCAGGAGCACCACCATCTCCCGATGCGGCGGCCGTCGCCGTTGGTAGCTGCCCCACGTACTCCGGATCAGGTTACTCTTCTGCATCTGACGGCGGCAACCAAGAAGAGTATGATCCCAATAAAGAAAATCCGTGTAAACGGTCATGTGGCTCTATGTCCATTCCTTTCCCATTCGCTCTTCTATCCGCATGCTCTGGCAGTAAAAGATTTCTCCTAAACTGTACATCAAATAAAACACTTATCGGAATTCCGCCAGCGCAATATCAGGTGATAAATATATCATTAGACGATGGTGTCCTATTTGTGAACAAGCCCTCAAACCTTGGAGATATCATCACAACGCCAACGGTGGCAAACGAGTTACATGACTTCGACTTCTCTGGGAGCCAAGGCATTTGGAGATGGGCTGTCGCCAATCAAACATGTCACACAGCGAGAACTGATCAGCTATCGTACGCTTGCGTGAGCAACAACAGTTTGTGTGTTCATAGATCTACTGGCTACCATTGCAAGTGCTCTTTGGGCTACGGAGGAAATGCCTATATCGAAGATGGCTGTGAGGATATTGATGAGTGTAGTCTACCCAACTTTTGTAATGGAAATTGCCAGAACTTCCTAGGGAGCTACAGGTGCTCACATTGCCCTCGTGGTTCAATTTTTGATCCTGCTAAACGTGTATGCATATATGGACATGGCCTTCATCCAGCTGGTCTTCTAATTGGACTTAGCTGTGGTATTGGAGTCCTTTTTCTTGTAGTAGGTCTAATTTTATTTGTTCGAAGGTGGAGGAGACATATGCAAAGAAAAATTAGAAGGGAATACTTCCAAAAAAACAAAGGCCTCCTACTTGAACAATTGATGTCGTCTGATGAAAATGTAGCACATGATCCAAAAATATTTTCCTTGGAAGAGCTAGAGAAGGCAACAGACAACTTTCATTCAACACGTATTCTTGGCTGTGGAGGCCATGGCACTGTATACAAGGGAATTTTGTTAGATCAACGCGTGGTTGCTATTAAGAAATCCAGAATTGTGGAGCAGAACGAAATTGATCAATTTATCAATGAGGTTGCCATCTTGTCTCAAATTGTTCATCGGAATGTGGTAAAACTTTTTGGTTGTTGCCTTGTATCAAAGGTACCTTTACTTGTGTATGAGTTCATCTCCAATGGTACATTATATGATCTTCTTCATGGTGAACAGAGTACAACATTCTCATTAACGTGGGAAGATTCTATCAGAATTTCACTTGAGGTTGCAAGTGCTCTTTCTTACCTCCACTCTGCTGCATCAATACCCATATTCCATAGAGATGTGAAATCAGCCAATATACTCTTAAACGACAATTACACTTCGAAGGTTTCAGACTTTGGCGCGTCAAGATCCATCTCCATTGACGAAACTCGTGTGGTGACAATTGTACAAGGGACATTTGGGTATTTGGATCCTGAATACTTCCATACATGCCAACTAACTGAGAAAAGTGATGTTTACAGCTTTGGTGTTATACTTGTTGAGATCCTAACAAGGAAGAAGCCTATCATAGTAAATTGTTTCGGTGAAAACCAAAACCTAGGTCATTGCTTTCTTCAAACACTACAACATGGAACAATCATGGAAATAGTGGATCCCCAAATTGCTAAGGAAGCAAATGAAAGTGAAATAAACGAAATGGCATCGCTTGCAGAAATATGTTTACGAATCAGAGGAGAAGAAAGGCCTAAAATGAAAGAGGTGGAGTTAAGGCTGCAGCTCCTAAGAGCTATGATAACTGAGAGAAGCCGTCAGGAGTTACTAAGGAACAATGGAATTGGGCCATCAGTACAATCCAATTCCAGCACTACATCTGTGACCAGGAGTGTTGTGCTTCGTGCAGGTATTGGCATATCCACTGATCAGGATGCAACTCGTTGCTATACCATGGAGCAAGAGCTCGTTTCTTGGACAGATCTACCGCGCTAA
More
|
||||||||||
Protein seq | MGPVLLCLAIAAATAVCAASSGAPPSPDAAAVAVGSCPTYSGSGYSSASDGGNQEEYDPNKENPCKRSCGSMSIPFPFALLSACSGSKRFLLNCTSNKTLIGIPPAQYQVINISLDDGVLFVNKPSNLGDIITTPTVANELHDFDFSGSQGIWRWAVANQTCHTARTDQLSYACVSNNSLCVHRSTGYHCKCSLGYGGNAYIEDGCEDIDECSLPNFCNGNCQNFLGSYRCSHCPRGSIFDPAKRVCIYGHGLHPAGLLIGLSCGIGVLFLVVGLILFVRRWRRHMQRKIRREYFQKNKGLLLEQLMSSDENVAHDPKIFSLEELEKATDNFHSTRILGCGGHGTVYKGILLDQRVVAIKKSRIVEQNEIDQFINEVAILSQIVHRNVVKLFGCCLVSKVPLLVYEFISNGTLYDLLHGEQSTTFSLTWEDSIRISLEVASALSYLHSAASIPIFHRDVKSANILLNDNYTSKVSDFGASRSISIDETRVVTIVQGTFGYLDPEYFHTCQLTEKSDVYSFGVILVEILTRKKPIIVNCFGENQNLGHCFLQTLQHGTIMEIVDPQIAKEANESEINEMASLAEICLRIRGEERPKMKEVELRLQLLRAMITERSRQELLRNNGIGPSVQSNSSTTSVTRSVVLRAGIGISTDQDATRCYTMEQELVSWTDLPR |
||||||||||
Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os04g0127500 | Os04t0127500-01 | Chr04 | 1723217 | 1727297 | + | irgsp1_rep | ||
CDS seq | ATGGGACCTGTGCTGCTGTGCCTAGCCATCGCCGCCGCCACCGCCGTGTGCGCAGCATCATCAGGAGCACCACCATCTCCCGATGCGGCGGCCGTCGCCGTTGGTAGCTGCCCCACGTACTCCGGATCAGGTTACTCTTCTGCATCTGACGGCGGCAACCAAGAAGAGTATGATCCCAATAAAGAAAATCCGTGTAAACGGTCATGTGGCTCTATGTCCATTCCTTTCCCATTCGCTCTTCTATCCGCATGCTCTGGCAGTAAAAGATTTCTCCTAAACTGTACATCAAATAAAACACTTATCGGAATTCCGCCAGCGCAATATCAGGTGATAAATATATCATTAGACGATGGTGTCCTATTTGTGAACAAGCCCTCAAACCTTGGAGATATCATCACAACGCCAACGGTGGCAAACGAGTTACATGACTTCGACTTCTCTGGGAGCCAAGGCATTTGGAGATGGGCTGTCGCCAATCAAACATGTCACACAGCGAGAACTGATCAGCTATCGTACGCTTGCGTGAGCAACAACAGTTTGTGTGTTCATAGATCTACTGGCTACCATTGCAAGTGCTCTTTGGGCTACGGAGGAAATGCCTATATCGAAGATGGCTGTGAGGATATTGATGAGTGTAGTCTACCCAACTTTTGTAATGGAAATTGCCAGAACTTCCTAGGGAGCTACAGGTGCTCACATTGCCCTCGTGGTTCAATTTTTGATCCTGCTAAACGTGTATGCATATATGGACATGGCCTTCATCCAGCTGGTCTTCTAATTGGACTTAGCTGTGGTATTGGAGTCCTTTTTCTTGTAGTAGGTCTAATTTTATTTGTTCGAAGGTGGAGGAGACATATGCAAAGAAAAATTAGAAGGGAATACTTCCAAAAAAACAAAGGCCTCCTACTTGAACAATTGATGTCGTCTGATGAAAATGTAGCACATGATCCAAAAATATTTTCCTTGGAAGAGCTAGAGAAGGCAACAGACAACTTTCATTCAACACGTATTCTTGGCTGTGGAGGCCATGGCACTGTATACAAGGGAATTTTGTTAGATCAACGCGTGGTTGCTATTAAGAAATCCAGAATTGTGGAGCAGAACGAAATTGATCAATTTATCAATGAGGTTGCCATCTTGTCTCAAATTGTTCATCGGAATGTGGTAAAACTTTTTGGTTGTTGCCTTGTATCAAAGGTACCTTTACTTGTGTATGAGTTCATCTCCAATGGTACATTATATGATCTTCTTCATGGTGAACAGAGTACAACATTCTCATTAACGTGGGAAGATTCTATCAGAATTTCACTTGAGGTTGCAAGTGCTCTTTCTTACCTCCACTCTGCTGCATCAATACCCATATTCCATAGAGATGTGAAATCAGCCAATATACTCTTAAACGACAATTACACTTCGAAGGTTTCAGACTTTGGCGCGTCAAGATCCATCTCCATTGACGAAACTCGTGTGGTGACAATTGTACAAGGGACATTTGGGTATTTGGATCCTGAATACTTCCATACATGCCAACTAACTGAGAAAAGTGATGTTTACAGCTTTGGTGTTATACTTGTTGAGATCCTAACAAGGAAGAAGCCTATCATAGTAAATTGTTTCGGTGAAAACCAAAACCTAGGTCATTGCTTTCTTCAAACACTACAACATGGAACAATCATGGAAATAGTGGATCCCCAAATTGCTAAGGAAGCAAATGAAAGTGAAATAAACGAAATGGCATCGCTTGCAGAAATATGTTTACGAATCAGAGGAGAAGAAAGGCCTAAAATGAAAGAGGTGGAGTTAAGGCTGCAGCTCCTAAGAGCTATGATAACTGAGAGAAGCCGTCAGGAGTTACTAAGGAACAATGGAATTGGGCCATCAGTACAATCCAATTCCAGCACTACATCTGTGACCAGGAGTGTTGTGCTTCGTGCAGGTATTGGCATATCCACTGATCAGGATGCAACTCGTTGCTATACCATGGAGCAAGAGCTCGTTTCTTGGACAGATCTACCGCGCTAA
More
|
|||||||
Protein seq | MGPVLLCLAIAAATAVCAASSGAPPSPDAAAVAVGSCPTYSGSGYSSASDGGNQEEYDPNKENPCKRSCGSMSIPFPFALLSACSGSKRFLLNCTSNKTLIGIPPAQYQVINISLDDGVLFVNKPSNLGDIITTPTVANELHDFDFSGSQGIWRWAVANQTCHTARTDQLSYACVSNNSLCVHRSTGYHCKCSLGYGGNAYIEDGCEDIDECSLPNFCNGNCQNFLGSYRCSHCPRGSIFDPAKRVCIYGHGLHPAGLLIGLSCGIGVLFLVVGLILFVRRWRRHMQRKIRREYFQKNKGLLLEQLMSSDENVAHDPKIFSLEELEKATDNFHSTRILGCGGHGTVYKGILLDQRVVAIKKSRIVEQNEIDQFINEVAILSQIVHRNVVKLFGCCLVSKVPLLVYEFISNGTLYDLLHGEQSTTFSLTWEDSIRISLEVASALSYLHSAASIPIFHRDVKSANILLNDNYTSKVSDFGASRSISIDETRVVTIVQGTFGYLDPEYFHTCQLTEKSDVYSFGVILVEILTRKKPIIVNCFGENQNLGHCFLQTLQHGTIMEIVDPQIAKEANESEINEMASLAEICLRIRGEERPKMKEVELRLQLLRAMITERSRQELLRNNGIGPSVQSNSSTTSVTRSVVLRAGIGISTDQDATRCYTMEQELVSWTDLPR
More
|
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | None | None | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0127500 | RBH | 0.225520 | 0.888326 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g03830 | RBH | 0.221042 | 0.597474 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0125700 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001120 | RBH | 0.000000 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0001180 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0001160 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001220 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0001190 | SBH | 0.000000 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0028100 | RBH | 0.331157 | 0.0257225 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0001340 | RBH | 0.096098 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0024300 | SBH | 1.1023455 | 3.1848745 | 0.035089 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001160 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007540 | SBH | 0.0 | 0.825154 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001280 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0000610 | SBH | 0.000000 | 0.167635 | 0.390676 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0000620 | SBH | 0.000000 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001280 | RBH | 0.0 | 0.0 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001290 | RBH | 0.0 | 0.0 | 0.0 |