Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g03830 | OGI:04002230 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:1723217-1727297 | ||||||||
| Gene Symbol | WAK29, OsWAK29 | ||||||||||
| DNA seq | GAAGATCTCGACAGTCAGATTGCTTTTAGGGGAATATGCAAAAAGGATTGCTCGACAGTCTCAGACCACCATGGGACCTGTGCTGCTGTGCCTAGCCATCGCCGCCGCCACCGCCGTGTGCGCAGCATCATCAGGAGCACCACCATCTCCCGATGCGGCGGCCGTCGCCGTTGGTAGCTGCCCCACGTACTCCGGATCAGGTTACTCTTCTGCATCTGACGGCGGCAACCAAGGTATATATAGACAAAGTTTTATACATACTTGAAATGATTAGATTCTGAAATCGTTGGTTGCTGTCTTGTGGATAGAAAGCAAATAAATATACTTAGGAGAAGTTCAATTTTTTTCAGATCATTATTTACGAACATATTTAACAGGGGAAATATCATGTGAAGATAAGAGTGTTTGAAAACTCGTGAAAATCATACTTAAATGTTTTCTAAATTCAAGAAAACATTACAAGAGATAGACATAAATATTAAATACACTTACCAAATCTAAAGTCCAAACTCAACTTTATTTGAGAGTAAAAAAAAACAAATTTCTGGTGAATAGTATCTTGTTCCTATTCATCCGAAAGTTGAGATTTGGTAAGAATGTATTTTATATCTACACCTATCTCTAGTAATTTTTTCATGTATTTACAAAACTTTTAGGTATGATTTTTACGAGTTTTCGATACTTAGCTCGTTGTCACCTGATATATATGTCCTCGATTTCAAATGCCATGTATGTTCAAAGTTTGGAGTTTTAGTAGTAGTGTTTTTGTTTCTTTTATTACATTACCAATTGTATATGTTGTTTCAAATAAGAAAACATACTTCAGTTCCAAACTTTAGAACAGTATGTGGCATCAAATAGACTTTCAATACTAACAAAATATCCATTTACGACGTGCGCCTTTACATGGGTGGACCTCAAGCCCTCAATCCCCATACATTCGTATGTATAGGCGAATATTTTGAACTAAAATCTGCCTATCCACTTGGATGAGCAGGGATTTTGACTAATAAGGCCTATATCAAGTACCATTAAATAATAATATAATACATAATATAAAGTTTAGGGAAATTAGTGCATCATGAAAATATATCTATTCAACAATGCAAACCAGAAAGTCTCTTGCCACATCTATGTAAAAAAATGAGCAGGGGAACCAGATAATATACATATTGGGGATCTGGAGTTAAGTTTTACTGTATCTTTCATACCGTCCATATATATATATACAACGTTCTAATGTAATTCTCTTTTATGAAAAATGTTCTAATGTAATTGATATATACTAAAATTGTTCATTGACATCTATAGTTCCATTTTGTACGACTGTAAAACCTTTTGTTTTACTTGTTCTAAAAGAAATCTTTCTTGTACCTTTTGGAACCAAGTTGTTTATCATATTTTCTTCAGCCAGGTTAATTGAAAGTCTGAATTGCTTATTAACCTTATTTAGCTATTCTTTTGCAATTTTCTATCATACATATGTCTAACATCACTTTTTATTGTTAATATTTCTTAACAGAAGAGTATGATCCCAATAAAGAAAATCCGTGTAAACGGTCATGTGGCTCTATGTCCATTCCTTTCCCATTCGCTCTTCTATCCGCATGCTCTGGCAGTAAAAGATTTCTCCTAAACTGTACATCAAATAAAACACTTATCGGAATTCCGCCAGCGCAATATCAGGTGATAAATATATCATTAGACGATGGTGTCCTATTTGTGAACAAGCCCTCAAACCTTGGAGATATCATCACAACGCCAACGGTGGCAAACGAGTTACATGACTTCGACTTCTCTGGGAGCCAAGGCATTTGGAGATGGGCTGTCGCCAATCAAACATGTCACACAGCGAGAACTGATCAGCTATCGTACGCTTGCGTGAGCAACAACAGTTTGTGTGTTCATAGATCTACTGGCTACCATTGCAAGTGCTCTTTGGGCTACGGAGGAAATGCCTATATCGAAGATGGCTGTGAGGGTATGCTGTCTCTGATAAGCTTGATCGCTATCGTATTTACTATCTGACTGTTTTAAGGTACACCAAATTGTTTTACTCTTGCCTCATAGGTGGTAAGATGACATATATTAACATTTGAAGCGTACTAATATCAGTTATTGCATTCCAATTATGAAAGAAACATTGTTTTCTTATTTTATTAATGTGTAGAAATTTGAATTATATGTAATATATAGACCAGTAAATTCTAAATTTTAAATAAAATTTCAATATCCATGTTGTAATTTTAAAATGAATTTCAAATTTATACCCTAAAATGGCTCTTTACTATTTCATCACTCCTCGGTTGTACAGATAGCAGAGGTTCATTATGACAAAAAAAAACTGTTTTTTATACTAAATCAACTAAGCAAACAAATTTTGTAGAAAAAACAAAAAGTAATTAAGAGAACCAGCATGTTATACTATCTACTTCAACTGATCACGTTTGATTACGTATGTACTCTGCAGATATTGATGAGTGTAGTCTACCCAACTTTTGTAATGGAAATTGCCAGAACTTCCTAGGGAGCTACAGGTGCTCACATTGCCCTCGTGGTTCAATTTTTGATCCTGCTAAACGTGTATGCATATATGGACATGGCCTTCATCCAGCTGGTATGTGATACCTCTCTTTTATTGACAAAATAAGTTTGCCATGAAAAGTAGTGAAATGTAACTCCAAGTATATTCATCTGTGTTACAGGTCTTCTAATTGGACTTAGCTGTGGTATTGGAGTCCTTTTTCTTGTAGTAGGTCTAATTTTATTTGTTCGAAGGTGGAGGAGACATATGCAAAGAAAAATTAGAAGGGAATACTTCCAAAAAAACAAAGGCCTCCTACTTGAACAATTGATGTCGTCTGATGAAAATGTAGCACATGATCCAAAAATATTTTCCTTGGAAGAGCTAGAGAAGGCAACAGACAACTTTCATTCAACACGTATTCTTGGCTGTGGAGGCCATGGCACTGTATACAAGGGAATTTTGTTAGATCAACGCGTGGTTGCTATTAAGAAATCCAGAATTGTGGAGCAGAACGAAATTGATCAATTTATCAATGAGGTTGCCATCTTGTCTCAAATTGTTCATCGGAATGTGGTAAAACTTTTTGGTTGTTGCCTTGTATCAAAGGTACCTTTACTTGTGTATGAGTTCATCTCCAATGGTACATTATATGATCTTCTTCATGGTGAACAGAGTACAACATTCTCATTAACGTGGGAAGATTCTATCAGAATTTCACTTGAGGTTGCAAGTGCTCTTTCTTACCTCCACTCTGCTGCATCAATACCCATATTCCATAGAGATGTGAAATCAGCCAATATACTCTTAAACGACAATTACACTTCGAAGGTTTCAGACTTTGGCGCGTCAAGATCCATCTCCATTGACGAAACTCGTGTGGTGACAATTGTACAAGGGACATTTGGGTATTTGGATCCTGAATACTTCCATACATGCCAACTAACTGAGAAAAGTGATGTTTACAGCTTTGGTGTTATACTTGTTGAGATCCTAACAAGGAAGAAGCCTATCATAGTAAATTGTTTCGGTGAAAACCAAAACCTAGGTCATTGCTTTCTTCAAACACTACAACATGGAACAATCATGGAAATAGTGGATCCCCAAATTGCTAAGGAAGCAAATGAAAGTGAAATAAACGAAATGGCATCGCTTGCAGAAATATGTTTACGAATCAGAGGAGAAGAAAGGCCTAAAATGAAAGAGGTGGAGTTAAGGCTGCAGCTCCTAAGAGCTATGATAACTGAGAGAAGCCGTCAGGAGTTACTAAGGAACAATGGAATTGGGCCATCAGTACAATCCAATTCCAGCACTACATCTGTGACCAGGAGTGTTGTGCTTCGTGCAGGTATTGGCATATCCACTGATCAGGATGCAACTCGTTGCTATACCATGGAGCAAGAGCTCGTTTCTTGGACAGATCTACCGCGCTAAACTGTACTACTCTATCTTTTATGAGACATCACAAACTATTCTCTGCCGTCTTTTTCTGGACTGTTTCCTTTTAGCGTGTGAAAAAAAAACAGATTAACTTTTTGAATGTTTGTTGGTTTAGTG
More
|
||||||||||
| CDS seq | ATGGGACCTGTGCTGCTGTGCCTAGCCATCGCCGCCGCCACCGCCGTGTGCGCAGCATCATCAGGAGCACCACCATCTCCCGATGCGGCGGCCGTCGCCGTTGGTAGCTGCCCCACGTACTCCGGATCAGGTTACTCTTCTGCATCTGACGGCGGCAACCAAGAAGAGTATGATCCCAATAAAGAAAATCCGTGTAAACGGTCATGTGGCTCTATGTCCATTCCTTTCCCATTCGCTCTTCTATCCGCATGCTCTGGCAGTAAAAGATTTCTCCTAAACTGTACATCAAATAAAACACTTATCGGAATTCCGCCAGCGCAATATCAGGTGATAAATATATCATTAGACGATGGTGTCCTATTTGTGAACAAGCCCTCAAACCTTGGAGATATCATCACAACGCCAACGGTGGCAAACGAGTTACATGACTTCGACTTCTCTGGGAGCCAAGGCATTTGGAGATGGGCTGTCGCCAATCAAACATGTCACACAGCGAGAACTGATCAGCTATCGTACGCTTGCGTGAGCAACAACAGTTTGTGTGTTCATAGATCTACTGGCTACCATTGCAAGTGCTCTTTGGGCTACGGAGGAAATGCCTATATCGAAGATGGCTGTGAGGATATTGATGAGTGTAGTCTACCCAACTTTTGTAATGGAAATTGCCAGAACTTCCTAGGGAGCTACAGGTGCTCACATTGCCCTCGTGGTTCAATTTTTGATCCTGCTAAACGTGTATGCATATATGGACATGGCCTTCATCCAGCTGGTCTTCTAATTGGACTTAGCTGTGGTATTGGAGTCCTTTTTCTTGTAGTAGGTCTAATTTTATTTGTTCGAAGGTGGAGGAGACATATGCAAAGAAAAATTAGAAGGGAATACTTCCAAAAAAACAAAGGCCTCCTACTTGAACAATTGATGTCGTCTGATGAAAATGTAGCACATGATCCAAAAATATTTTCCTTGGAAGAGCTAGAGAAGGCAACAGACAACTTTCATTCAACACGTATTCTTGGCTGTGGAGGCCATGGCACTGTATACAAGGGAATTTTGTTAGATCAACGCGTGGTTGCTATTAAGAAATCCAGAATTGTGGAGCAGAACGAAATTGATCAATTTATCAATGAGGTTGCCATCTTGTCTCAAATTGTTCATCGGAATGTGGTAAAACTTTTTGGTTGTTGCCTTGTATCAAAGGTACCTTTACTTGTGTATGAGTTCATCTCCAATGGTACATTATATGATCTTCTTCATGGTGAACAGAGTACAACATTCTCATTAACGTGGGAAGATTCTATCAGAATTTCACTTGAGGTTGCAAGTGCTCTTTCTTACCTCCACTCTGCTGCATCAATACCCATATTCCATAGAGATGTGAAATCAGCCAATATACTCTTAAACGACAATTACACTTCGAAGGTTTCAGACTTTGGCGCGTCAAGATCCATCTCCATTGACGAAACTCGTGTGGTGACAATTGTACAAGGGACATTTGGGTATTTGGATCCTGAATACTTCCATACATGCCAACTAACTGAGAAAAGTGATGTTTACAGCTTTGGTGTTATACTTGTTGAGATCCTAACAAGGAAGAAGCCTATCATAGTAAATTGTTTCGGTGAAAACCAAAACCTAGGTCATTGCTTTCTTCAAACACTACAACATGGAACAATCATGGAAATAGTGGATCCCCAAATTGCTAAGGAAGCAAATGAAAGTGAAATAAACGAAATGGCATCGCTTGCAGAAATATGTTTACGAATCAGAGGAGAAGAAAGGCCTAAAATGAAAGAGGTGGAGTTAAGGCTGCAGCTCCTAAGAGCTATGATAACTGAGAGAAGCCGTCAGGAGTTACTAAGGAACAATGGAATTGGGCCATCAGTACAATCCAATTCCAGCACTACATCTGTGACCAGGAGTGTTGTGCTTCGTGCAGGTATTGGCATATCCACTGATCAGGATGCAACTCGTTGCTATACCATGGAGCAAGAGCTCGTTTCTTGGACAGATCTACCGCGCTAA
More
|
||||||||||
| Protein seq | MGPVLLCLAIAAATAVCAASSGAPPSPDAAAVAVGSCPTYSGSGYSSASDGGNQEEYDPNKENPCKRSCGSMSIPFPFALLSACSGSKRFLLNCTSNKTLIGIPPAQYQVINISLDDGVLFVNKPSNLGDIITTPTVANELHDFDFSGSQGIWRWAVANQTCHTARTDQLSYACVSNNSLCVHRSTGYHCKCSLGYGGNAYIEDGCEDIDECSLPNFCNGNCQNFLGSYRCSHCPRGSIFDPAKRVCIYGHGLHPAGLLIGLSCGIGVLFLVVGLILFVRRWRRHMQRKIRREYFQKNKGLLLEQLMSSDENVAHDPKIFSLEELEKATDNFHSTRILGCGGHGTVYKGILLDQRVVAIKKSRIVEQNEIDQFINEVAILSQIVHRNVVKLFGCCLVSKVPLLVYEFISNGTLYDLLHGEQSTTFSLTWEDSIRISLEVASALSYLHSAASIPIFHRDVKSANILLNDNYTSKVSDFGASRSISIDETRVVTIVQGTFGYLDPEYFHTCQLTEKSDVYSFGVILVEILTRKKPIIVNCFGENQNLGHCFLQTLQHGTIMEIVDPQIAKEANESEINEMASLAEICLRIRGEERPKMKEVELRLQLLRAMITERSRQELLRNNGIGPSVQSNSSTTSVTRSVVLRAGIGISTDQDATRCYTMEQELVSWTDLPR |
||||||||||
| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g03830 | LOC_Os04g03830.1 | Chr04 | 1723217 | 1727297 | + | MSU_osa1r7 | ||
| CDS seq | ATGGGACCTGTGCTGCTGTGCCTAGCCATCGCCGCCGCCACCGCCGTGTGCGCAGCATCATCAGGAGCACCACCATCTCCCGATGCGGCGGCCGTCGCCGTTGGTAGCTGCCCCACGTACTCCGGATCAGGTTACTCTTCTGCATCTGACGGCGGCAACCAAGAAGAGTATGATCCCAATAAAGAAAATCCGTGTAAACGGTCATGTGGCTCTATGTCCATTCCTTTCCCATTCGCTCTTCTATCCGCATGCTCTGGCAGTAAAAGATTTCTCCTAAACTGTACATCAAATAAAACACTTATCGGAATTCCGCCAGCGCAATATCAGGTGATAAATATATCATTAGACGATGGTGTCCTATTTGTGAACAAGCCCTCAAACCTTGGAGATATCATCACAACGCCAACGGTGGCAAACGAGTTACATGACTTCGACTTCTCTGGGAGCCAAGGCATTTGGAGATGGGCTGTCGCCAATCAAACATGTCACACAGCGAGAACTGATCAGCTATCGTACGCTTGCGTGAGCAACAACAGTTTGTGTGTTCATAGATCTACTGGCTACCATTGCAAGTGCTCTTTGGGCTACGGAGGAAATGCCTATATCGAAGATGGCTGTGAGGATATTGATGAGTGTAGTCTACCCAACTTTTGTAATGGAAATTGCCAGAACTTCCTAGGGAGCTACAGGTGCTCACATTGCCCTCGTGGTTCAATTTTTGATCCTGCTAAACGTGTATGCATATATGGACATGGCCTTCATCCAGCTGGTCTTCTAATTGGACTTAGCTGTGGTATTGGAGTCCTTTTTCTTGTAGTAGGTCTAATTTTATTTGTTCGAAGGTGGAGGAGACATATGCAAAGAAAAATTAGAAGGGAATACTTCCAAAAAAACAAAGGCCTCCTACTTGAACAATTGATGTCGTCTGATGAAAATGTAGCACATGATCCAAAAATATTTTCCTTGGAAGAGCTAGAGAAGGCAACAGACAACTTTCATTCAACACGTATTCTTGGCTGTGGAGGCCATGGCACTGTATACAAGGGAATTTTGTTAGATCAACGCGTGGTTGCTATTAAGAAATCCAGAATTGTGGAGCAGAACGAAATTGATCAATTTATCAATGAGGTTGCCATCTTGTCTCAAATTGTTCATCGGAATGTGGTAAAACTTTTTGGTTGTTGCCTTGTATCAAAGGTACCTTTACTTGTGTATGAGTTCATCTCCAATGGTACATTATATGATCTTCTTCATGGTGAACAGAGTACAACATTCTCATTAACGTGGGAAGATTCTATCAGAATTTCACTTGAGGTTGCAAGTGCTCTTTCTTACCTCCACTCTGCTGCATCAATACCCATATTCCATAGAGATGTGAAATCAGCCAATATACTCTTAAACGACAATTACACTTCGAAGGTTTCAGACTTTGGCGCGTCAAGATCCATCTCCATTGACGAAACTCGTGTGGTGACAATTGTACAAGGGACATTTGGGTATTTGGATCCTGAATACTTCCATACATGCCAACTAACTGAGAAAAGTGATGTTTACAGCTTTGGTGTTATACTTGTTGAGATCCTAACAAGGAAGAAGCCTATCATAGTAAATTGTTTCGGTGAAAACCAAAACCTAGGTCATTGCTTTCTTCAAACACTACAACATGGAACAATCATGGAAATAGTGGATCCCCAAATTGCTAAGGAAGCAAATGAAAGTGAAATAAACGAAATGGCATCGCTTGCAGAAATATGTTTACGAATCAGAGGAGAAGAAAGGCCTAAAATGAAAGAGGTGGAGTTAAGGCTGCAGCTCCTAAGAGCTATGATAACTGAGAGAAGCCGTCAGGAGTTACTAAGGAACAATGGAATTGGGCCATCAGTACAATCCAATTCCAGCACTACATCTGTGACCAGGAGTGTTGTGCTTCGTGCAGGTATTGGCATATCCACTGATCAGGATGCAACTCGTTGCTATACCATGGAGCAAGAGCTCGTTTCTTGGACAGATCTACCGCGCTAA
More
|
|||||||
| Protein seq | MGPVLLCLAIAAATAVCAASSGAPPSPDAAAVAVGSCPTYSGSGYSSASDGGNQEEYDPNKENPCKRSCGSMSIPFPFALLSACSGSKRFLLNCTSNKTLIGIPPAQYQVINISLDDGVLFVNKPSNLGDIITTPTVANELHDFDFSGSQGIWRWAVANQTCHTARTDQLSYACVSNNSLCVHRSTGYHCKCSLGYGGNAYIEDGCEDIDECSLPNFCNGNCQNFLGSYRCSHCPRGSIFDPAKRVCIYGHGLHPAGLLIGLSCGIGVLFLVVGLILFVRRWRRHMQRKIRREYFQKNKGLLLEQLMSSDENVAHDPKIFSLEELEKATDNFHSTRILGCGGHGTVYKGILLDQRVVAIKKSRIVEQNEIDQFINEVAILSQIVHRNVVKLFGCCLVSKVPLLVYEFISNGTLYDLLHGEQSTTFSLTWEDSIRISLEVASALSYLHSAASIPIFHRDVKSANILLNDNYTSKVSDFGASRSISIDETRVVTIVQGTFGYLDPEYFHTCQLTEKSDVYSFGVILVEILTRKKPIIVNCFGENQNLGHCFLQTLQHGTIMEIVDPQIAKEANESEINEMASLAEICLRIRGEERPKMKEVELRLQLLRAMITERSRQELLRNNGIGPSVQSNSSTTSVTRSVVLRAGIGISTDQDATRCYTMEQELVSWTDLPR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.221042 | 0.597474 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0127500 | RBH | 0.225520 | 0.888326 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g09220 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0127500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001120 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0001180 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0001160 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001220 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0001190 | SBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0028100 | RBH | 0.331157 | 0.0257225 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0001340 | RBH | 0.096098 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001160 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0000650 | RBH | 0.000000 | 4.086154 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001280 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001280 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001290 | RBH | 0.0 | 0.0 | 0.0 |
