Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os03g0448600 OGI:03051990 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr03:19184047-19191279
Gene Symbol OsWD40-76
DNA seq

AGATGCTGACCATCCCTTCAACATAAACAAGGAATTTCGTCAACAGATGTGGTTGACATGAACTTAAGAGAACTAGGGAAATGGAGTGTCCGACATAAATACTTTTTTTCTTGCGAGGATACAAAAATACTAATTTGAATGACGCTTTACTCTCACCATACACATCAAACCACACGATTACCCCTGTCGTGAGACAACTAAAACACTTCTAAGGTGCTGCCAGTGCCTTAGGCTTCGGCTTTACTTCCACTTCATTCACTGACCGGATAAATATTGCATCAGGTTCATGGCTGAACAGGAAAACCACATAGTATGTCAAGATTCCACTATTGTTGTTCTTTTAGATAATGGACAATGTCCTCCTAATGACAGGAAGAAAACAAAGTAAAATCTTACGATTTTTCTCCCTCTTCATAAGTGTAGCTGGATGCCACAGCGAGCAGGTGCCCATCCTTACTAAATGACAAAGCAGCTATGCTTGACGCATACTTTGAATACTGCAATAAAAGAAGAACATTAATGGCAACTATTTTAGCCCTTGTCTTCATTGAGATAGTATCACTTGTACCTGATATAGTCTTTTCTTGTTAATGCCATCCCATACATTCACAAATCCGTCACACCCACCAGTGGCAAATGTACCATATCTGCAGAGGATACAAAAGACCCAAGTTAAAGACAACGAGCAATTCTATAAATCAAAAGCTGACAAAAGGCATGTCAAGCCTTTACATTGGATGGAATGCAATTGCATTGACAGGATAAACGGTGTCCCGGCCAGCTTCTGATTTCCGATGACACTTGAAAGCATACCTGCATAGGATTATCAGATGAGCCAACAAGTAATTTTTCACAGGATATCACCTACGATAGATCAGAGGGAAGGTACACTGATATTATATTCTGAGTTGACTGCATTATCTTCTACAGCTGCCTTAATAAAGTTAAAATATGACATAGATGTTCGTTCAATGATGCAGTGCTGTGTAATACAGAAAGTCAACTTCTGTGTATAATACAAGTACTGAAAATTCTGCATTTCATAATACTTTTCGTTACTAGTATCAACTGAGCACCCTACTTTTCATTACCCCCACCCGTAAAGCAACCCAAAAGCAATTTGGTTGGGCCTTGATGGCCAAATGGGATTTAGTAAGATAATTTGGATGTTCCTACTTGGTTTTCTGGAAAAAGAAATCTGACAGTGAAATTTTAAATATGATTCCGCTCTGCTCATTCATAGCAACAATCTATATGACACCTAAGTCAACAGTGATAGGCAGACAAAAGATGCAGGCTCGTAACCTGCTCAAGCTAAAAATTAGCCAATCTCAATTTTAGGCTCAAGCTCATGCAACTTGATACGTGGGTGTCGAGGTTTTACCTGAGCTCTCTGCACACAAATTTCAAACTCCTAAGCAAGCAGCATGGCCTAACTACCCCTATTCTTCAAGAAATAAAAATAAATGGAAGCTAGCTAGCACCAATGTCATCATCTCTTCAATCCCTAGTCAGCAGTCAAGGTCAATTCCATCTCCACCTCAATGAGTATTTAATTGTGTTGATTATAGACAGCTTTGAGATGCCTTTTGTGTTTTGTGTTTGAAGAACCAAAATGGGAAAACTGGTTACAGCACATGAAATTAAGCAAGTTGGTGTTTGTTATTCATAAGCAAGATGGCCGGCTTCTTAGAATCTTAAGCTCCCCCAAACAGAGCCTTTTAGCTACATGAGCAAGGTTCGATGAAAGAAATCTAACTTGCCAATCCAATATGACTTTCAAAGGAACATGGAGCAGCAGCTAGTGATATTCATTCTTGCCCACTGAGAACCATATTCTACACCTTCTCTATGTTGATGACATGCTCAGACATGATCAAGTGCTCTTGTTCTACTCCCTCCAGTCATAAAATAAAGTCATTTTGGGATGTGTGCCGCCAACATAAGTCAACACTGACCATAAATACTGTTTAAAATGGTGATGCCAAGTCCGTCCTAAGTCCTAACAAAAGCATTCCTAAGATTATACTTGTCTGACTTAAGTTTTTTTTTTTTTGCAAAAGAATCAAGTACTGATTTGAAAGTTATGTTTGTCAACTTTGAAAAGCCCAAAACAACTTCCTTCCATGTTCTACAAGTGTCTATGCATCTTGCATATTGACAAAACTTAGCTCAACACATGCCTTGTTCAATTTATGCCTTGTCTATAGCAGTAACCAATTTGAATTTTGAATTCAAAAACATGGATTCAGACTTTTGTCCGGTCAAGAACTGGAAAGTGATAAACGCTGCTAAAACAAGCGGCTAACTGTTTCATGGAGTGACCAGTATTTTTTCCCAAAACCCATATTTACAACCTTGGTTTACTAGTTGGTCAACTAGTTGATCAGGACTGCAAGTCACCCCTTTTGTAACACCTTTAGAACTGAGAACAGCGCAAGTTTCTAACCACAAAAACCATTTCCTTTGACCTAGAAATCTCCAATGCAGCCACATAGTAGTGATCAGACGACTACTTTTTGGTCATCAAACCATGGATACAAATGGTTACACTTAGATCACCAAAACGTCCCAAGTTCAGAAATAAAATTATCAAGAAATTTTGAAATGATAGATAAAGTAACTCATAATTTATGGTCTAATGTTGAGTTTTTGCACAACCCAAAGTGAGGTACGCATGATTGCAACTAGGAACTAGCTACCAGTTTAAACTGGATGTCTTTATGTATGTTAGATATTTCATGTTTTTATAATAACTAGAAAAAATACCCGTGCATTGCAACGGGTTACAGGAATTTTAGTCTTACATATTACTTAAGTTCAAGATATCCTACTCTAAGCTCAAGGTTGATCAAAAGGAGCTGGCCATTATTTGCTCGATGAAAATGGGAGCCCTGCTATGGTTTTTGCATCCATGCACAACCTATAACATCCAGTTAGATAGTTAAGTCTTCCTTGTTATGAAAATAGATGCATAACGGATACACGAATTTTATATGAAAAATCCTTATGGGAAAAAACTATGGGCGACGATCGGCAATGATCAGTATAGAGGAGTTGAATACAAACGTAGATGACACATAGTGTTGTCGCATCCTTCCCATGCGGCATACAAGAGATATATAAAAGGAGAAATCTATGAGTCCTAATATGTAATACAAAGTCCTATTAGGTAACTAACCCGAATATATTGTATGCTAAAATTTAGTTAACATATTTCACAATCTCTACCTTGAGACAAATTTCGTCTTGTAGCATAAAAATCTTTAATCTCCAAACAAACTCATGATGTGACAAAATCATTGTGTGCGAAATAGTCACTTGGACAATAAAACCATAACACCCTTAATCTATAAGAGGTATACCATACTTCAAACTCGCCATTGGGAATAAATTCTGAATTTATTGGTATAAACTTGCGTAAACCTAGCAGAAACGCGATGCACTTTGGGTGAAAAAAGAAGTATTTTGATCTTCATAAAAACCTCATAGTAATCTGGCATATGAGCTTAGCAAAAACTGAACCTAAATTTGATTTACCCAAACAGAACGAAAGCAATGCAGATGAATTAATTCCCTGTACATGCACGAAGCGACAATCTATAAATCTTCTGGTGCACAAGCTTGGGTGGACGTAGCAATTCACCAGAAAATCACCCACTGTAGAGTGACAGGGGCAGCGAATTAACTTTGCTTGGCCTTCTCGTGAGCCGTGCGGTAGATGGATTGGCTGGCCCATCGCTGTCTCTTGCCTCCTGACAGAAACGGATTCGGTCGGCGTGGTCAACACGGAAAAAGGGCAGAGGCAATGCAAATCTTCAACGAACGTGTGGCGTCGCGTGTTATACACAGGAATCGGACGCGAACTGCTTCGCGCGCGGAGACAATATCAGACGCAATCGGACGCAGGCGACGTACGAAAACTACGGCAAAAACATCTTCAATTTTTATAATAGGTAGAGAAGAAGCAATGGAGGACAGGAAACTAAAAATTGTTCTGTAAAAACAGAAAAGCTGTTTGGATGGAAGATTCTTAGTCCATTATATTAAGTCTTAATTAACATGCTCCAAGAAACAAATGTTTTAAAACGCAAGCTAAGATGCAGAAAACATACTTTTTAGATTGAGCAGACTCAGATAGATCAAAGAATTCCATAGAAACTCGTCCTTCAACAGAACTTAGGGCATATCCTGAAGCATTGACAAGAAAGATCAAGGTCAGTCAACAAAATATATTTCACTGTAGTAGGAAAAATAATAATGAACAATGCAATCCACAGAATAAAAGCAAGGTGACTGTATTGATTCCAAAACTTACACACAAAAAAAAACCATGTATAAGATCAACAGCCACTCTAAAGGAACTTATACCATAAGGCTCAAATCAAAATAGATGGAAAGAAGCTTAGATTATCTAATGCTATTCATCTTGTCTGTGCACACGCACAGACAAAATAGACATATTATCTAGCATCAAGACAGAAGGAAATTCATCTATACCCCCCCCCCCACATTACATTAAATGTAGTGGTGATGGTGGTAGTGAATCTAACACCCTATTAGCTCCCACTACATCTTGTACAGATTGCTACCAAATTTTTTTCTAATATTACGTAATATATCATTTATATGTTATTCTATCTTTATTTGTATTTTTCTAAAATCATAATTTAACAAGTCCCAGGAAAACTCTAAAATGTTAAAAATGTCTTAGTTTATATGTAATGCATGAGTTAACTTCATAGGTAATACATGTAAACACCATCAAATGCTCTTGTAACAAAAAAGGAAATCAAGGACATGTTTGGTGCAAAATCAAATTGTCCATCACAAGCATAAGGGCATTTAGCTAGTGTTTGAAACATGGGAGACAACTGGAAATGTACTGTCCTGCAGCATAAGTAATCAAAAGAGAGCATATTACCTGTTCCATTGGGGAAACATCGAACACAACGTGTTTGATATTTCAAAGAAGAGTCCCTTTTTTGCTCATGTTGAGACATATTACGCAGATCATAAATATTGACATGTCTTCCTGCTGTTGCAACAACCAACCTATTCCCCACTAACGACAGAGAATATACACGCTCAGGTTGAGCATATGTCCCAACAAGCGTACGCTCTGGTCCACTTACACCTCTTGGATCCCAACACTTGATAGTCTTATCCCAGCTGCCAGTGATGACTTGACCTGCATAGATAAAAATCCATAAATGAACAGGTAATTTCAATATCCACAAATGAATAGTTAATTTCTGTATTGTTTTTAGGATGTAACAAATTATACATGACAACCAGATCGTAGTACATGCTAATATATGCAATGCCACAGAATCAAGTTTTGCACAATTTCCAGAAATTTACCAACTAGAAGTTTGGTTACTTTAGCCAATCTGTATAGCATATTCACTAAAACAAGCAGAACCGAGGACAGGAAGAAATTCATTCATGAATCATCTGCTGACTGGTGTTTGCCCTTAAATTAAAAGAAATGGATGCTACCCTAACTTGCTACTCCCACCAGTAATGCAGGTCATTCTCTCTAAAAGATTTCAAATAGACATCGATACTCAAAAGATTTGAAAGTTCGATAATCATGTCTGCAAGATGTGTCACGAGAAATTAAGTCAGCACTCAGCACTAAAGCAGGTAAGAACACCAACATCACTACCAGATAGAGAATTAGTATGAAACATAAACAACAAACTGACATGGGCATTCGCCGAATCCTCTATCCAAAGAGTTAAGCACTATGATCGATTTTTTCATGCTCAAGTACAAACTAATAGTACAATATAGAATTCAAATAACAATTCAGCCAGAAAATGTGCATGACATCCAAAATAATGAGAACTTGATTACTCCAGTAAACAGCCAGTTAAACTCCTAAGGTTGAAGATTTTAATGCAGGAATGTGTGTTCAGTAAAATCGAAGTACCTGCAGCATAAGAGTACTCCACGCAGCGAACAGGAGCATCATGCCGTCCTAAAAGATCCTCTTTTGCTGAACCAAATACTAACCTGGAAGTCACGTGCCCCATTGCTTGTTAGTCTTACCAAGTCTTCACGTTATGGTAGAATATAATAAGGATGAGCTAATGATGATATCAATAAGAAAAAATATAAGCCTATTTACAAGCAACAAAGTGTTGAGTTTAGACAACTGAATTTACAAGAAACATTTAGTTCACTCATGTGTTCATGGTTGCTTAATGACGCTAGTAGCTGATTATATGTATTTGAATATATACATATATGTGCATACATGTTAATTGTTATACGGGGAAATACATCCATGGCATTGTAACATGGTCCATTGAGCATAAAATCTACTCCATTTCTCCAGCCTCTAACTAGGATCCCGAATTAACAACCCTTAACATTTTCTATCATCTGTGTCAATTGCATCCCAATTTGTTTTTCTGGCCGTTGGACGGTAACACAGCTTATGAAAGACAACTTTAAGCACTATTTTATATAACAATACAATTTGGAAACTAAATAAAATTATAGTGTCATGAGATTGAGAAAAAAAATCTACTCAAATCTGGTTACGATAGTACTGATGCTCCAAGTTGACTCGAGGGAGTACTATCCCAAACCATCATGAGCAAGCATATAAAGGAGCAATTGTTGAAAATGACAGTATCCAGAACAAACCTCCTGAACCGTCAAATCAACCGCGTGCAAAGAGTTGAATGAGGCAGGAGAACGGGGTTAACTCAAAATGGCTGACCTACGCACGGTGTGGTCGGCGCCGGCGCTAAACCCGGAGGAGTCGTCGTGGAAGCAGCAGTCGAGCACGGCCCCGGCGTGTACGAACTCACCCTTGAGCACGTTCGCGTCGGCGTCGTAGAGGCGCACCGTCTAAAAGAGATCGCAAGGAACCAAACCCCGGTCAGATCTTCCAAATCAAAGGGGGGCTAGGGTTTACTTACGGGCCACCAAGACCGCAAGGAACGGAGAGGGACGCGCATCGTCGCTGACCTTGTCCCAGGAGGAGACGAGGAGGTGGTCACTGTGGTTGGAGAACCGGAGGTTGGAGATCCCGTCCGTCGGCGGGTTGGCGAGCTCCTTGCCGCTGCCGACGGCGGCTGCTGGGGCGGCGGCGGCGCTCATGGTGGGAGGCCCAAAGGGAGGAGGAATTGGATCGTTAGGGTTTCGGCTCGGCAGGAGGAGGGGAGCGTGTGGGGAGGAAGGGGAATCCAAATTTGAATTTGCAACGGGCAGAGT

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CDS seq

ATGAGCGCCGCCGCCGCCCCAGCAGCCGCCGTCGGCAGCGGCAAGGAGCTCGCCAACCCGCCGACGGACGGGATCTCCAACCTCCGGTTCTCCAACCACAGTGACCACCTCCTCGTCTCCTCCTGGGACAAGACGGTGCGCCTCTACGACGCCGACGCGAACGTGCTCAAGGGTGAGTTCGTACACGCCGGGGCCGTGCTCGACTGCTGCTTCCACGACGACTCCTCCGGGTTTAGCGCCGGCGCCGACCACACCGTGCGTAGGTTAGTATTTGGTTCAGCAAAAGAGGATCTTTTAGGACGGCATGATGCTCCTGTTCGCTGCGTGGAGTACTCTTATGCTGCAGGTCAAGTCATCACTGGCAGCTGGGATAAGACTATCAAGTGTTGGGATCCAAGAGGTGTAAGTGGACCAGAGCGTACGCTTGTTGGGACATATGCTCAACCTGAGCGTGTATATTCTCTGTCGTTAGTGGGGAATAGGTTGGTTGTTGCAACAGCAGGAAGACATGTCAATATTTATGATCTGCGTAATATGTCTCAACATGAGCAAAAAAGGGACTCTTCTTTGAAATATCAAACACGTTGTGTTCGATGTTTCCCCAATGGAACAGGATATGCCCTAAGTTCTGTTGAAGGACGAGTTTCTATGGAATTCTTTGATCTATCTGAGTCTGCTCAATCTAAAAAGTATGCTTTCAAGTGTCATCGGAAATCAGAAGCTGGCCGGGACACCGTTTATCCTGTCAATGCAATTGCATTCCATCCAATATATGGTACATTTGCCACTGGTGGGTGTGACGGATTTGTGAATGTATGGGATGGCATTAACAAGAAAAGACTATATCAGTATTCAAAGTATGCGTCAAGCATAGCTGCTTTGTCATTTAGTAAGGATGGGCACCTGCTCGCTGTGGCATCCAGCTACACTTATGAAGAGGGAGAAAAATCCCATGAACCTGATGCAATATTTATCCGGTCAGTGAATGAAGTGGAAGTAAAGCCGAAGCCTAAGGCACTGGCAGCACCTTAG

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Protein seq

MSAAAAPAAAVGSGKELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHAGAVLDCCFHDDSSGFSAGADHTVRRLVFGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWDPRGVSGPERTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLKYQTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVASSYTYEEGEKSHEPDAIFIRSVNEVEVKPKPKALAAP

Function Mitotic checkpoint protein BUB3.1 [UniProtKB/Swiss-Prot:Q9LJN8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os03g0448600 Os03t0448600-01 Chr03 19184047 19191279 - irgsp1_rep
CDS seq

ATGAGCGCCGCCGCCGCCCCAGCAGCCGCCGTCGGCAGCGGCAAGGAGCTCGCCAACCCGCCGACGGACGGGATCTCCAACCTCCGGTTCTCCAACCACAGTGACCACCTCCTCGTCTCCTCCTGGGACAAGACGGTGCGCCTCTACGACGCCGACGCGAACGTGCTCAAGGGTGAGTTCGTACACGCCGGGGCCGTGCTCGACTGCTGCTTCCACGACGACTCCTCCGGGTTTAGCGCCGGCGCCGACCACACCGTGCGTAGGTTAGTATTTGGTTCAGCAAAAGAGGATCTTTTAGGACGGCATGATGCTCCTGTTCGCTGCGTGGAGTACTCTTATGCTGCAGGTCAAGTCATCACTGGCAGCTGGGATAAGACTATCAAGTGTTGGGATCCAAGAGGTGTAAGTGGACCAGAGCGTACGCTTGTTGGGACATATGCTCAACCTGAGCGTGTATATTCTCTGTCGTTAGTGGGGAATAGGTTGGTTGTTGCAACAGCAGGAAGACATGTCAATATTTATGATCTGCGTAATATGTCTCAACATGAGCAAAAAAGGGACTCTTCTTTGAAATATCAAACACGTTGTGTTCGATGTTTCCCCAATGGAACAGGATATGCCCTAAGTTCTGTTGAAGGACGAGTTTCTATGGAATTCTTTGATCTATCTGAGTCTGCTCAATCTAAAAAGTATGCTTTCAAGTGTCATCGGAAATCAGAAGCTGGCCGGGACACCGTTTATCCTGTCAATGCAATTGCATTCCATCCAATATATGGTACATTTGCCACTGGTGGGTGTGACGGATTTGTGAATGTATGGGATGGCATTAACAAGAAAAGACTATATCAGTATTCAAAGTATGCGTCAAGCATAGCTGCTTTGTCATTTAGTAAGGATGGGCACCTGCTCGCTGTGGCATCCAGCTACACTTATGAAGAGGGAGAAAAATCCCATGAACCTGATGCAATATTTATCCGGTCAGTGAATGAAGTGGAAGTAAAGCCGAAGCCTAAGGCACTGGCAGCACCTTAG

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Protein seq

MSAAAAPAAAVGSGKELANPPTDGISNLRFSNHSDHLLVSSWDKTVRLYDADANVLKGEFVHAGAVLDCCFHDDSSGFSAGADHTVRRLVFGSAKEDLLGRHDAPVRCVEYSYAAGQVITGSWDKTIKCWDPRGVSGPERTLVGTYAQPERVYSLSLVGNRLVVATAGRHVNIYDLRNMSQHEQKRDSSLKYQTRCVRCFPNGTGYALSSVEGRVSMEFFDLSESAQSKKYAFKCHRKSEAGRDTVYPVNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVASSYTYEEGEKSHEPDAIFIRSVNEVEVKPKPKALAAP

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0448600 RBH 1.967152 1.293184 5.901382
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g33580 RBH 1.293582 0.722943 1.322102
Nipponbare | IRGSP 1.0 | RAP-db Os07g0588500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0023160 RBH 1.040359 13.851074 3.308849
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0023000 RBH 0.078910 4.571487 1.800730
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0023050 RBH 1.898196 13.612857 7.865892
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0023060 RBH 0.131268 0.651585 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0022850 RBH 2.064017 27.015800 12.115891
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0317100 RBH 1.680472 2.4881785 32.6523525
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0022620 RBH 0.226001 0.940017 1.414852
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0318700 RBH 2.928748 6.843036 12.435234
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0022910 RBH 0.138721 0.769098 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0022920 RBH 0.113858 32.520535 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0022990 RBH 0.972753 10.531077 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0022830 RBH 0.0 1.503787 1.547278
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0022700 RBH 0.148885 7.531422 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G022680 RBH 0.000000 13.158223 2.471966
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0022610 RBH 0.629256 10.582121 8.374249
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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