Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0777400 | OGI:02092810 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:32882405-32889742 | ||||||||
| Gene Symbol | OsCLVATA, CLVATA, RLCK85, OsRLCK85, OsER2, ER2 | ||||||||||
| DNA seq | ATGGACGTGCCCCCTGTTCGTCACCCACAAGACACACCACCACCACCATCACCTTCACGCCAAAGCCTCCCTCTCCCATCTCTCCCTCTCTCTCCCTCCCCTGCGCCCATAGCTCGCAGCTTTGCAGCAGCCAAGCCAAGAAGCCAACTCAACCCATCAGAACGGCAGAAACCCCAGCCGCGGCGTTGGTTAAACCACAGCAAAGCGTCGTTGATGCCCCCGCGCGGACGCCTCGCCTCGGCGCCATGACGACGACCACCACCACTCGCCTCCTCCTCGCTGCCATTCTCCTCGCGGTGGCCGCCGCCGACGATGACGGTGGGTGGCCGCGTGCCGTTCCCTTTTGCTCTGCTCGCCTGCGTGCGTTGGCGAGGGAGGGAGGGAGAGGGAAGGATGATGGATTATAGTGGGGAGGGAGGGGGTTGGGTTTGGGTGGCTTCGTGTTTTGGTGTTTTTTTAGTGCTGCGAGTGCGCGCCTTTTGGTCTTTGTTTATGTCTTGCTCCCTATTGGCCGGCGCCGCCTAAGAATGGCCTAATACTAGATTAATCCCAGCCTCCTGTTCGTAGCATCTCTTCTTCTGTTCTTCTTCCCTATCCAGGGGACAGTTGCTGTACTTTTTTTTTGTTTTGTTTTTTAAATGCGGCTTTATTTTTGAACTATTTTTTTTTCTGTTTTGTTTCGTTCATGGATAAGGTTTCTATATTGTTCTTGGAGATCAAATGCTCATTTCTGAAATGCCGCCGCTGTTTGTGGAAGTTTAGGGAGTGTTTTTTTTTTGTGTGGGGTTTTTGGTTATCGAGTTTTGGATCCGGAAATGGTTTTAAATTATTTTGGAAGTTATTCTCCGATTCCTCCTCCGAAACCAGATTCCTGTTTCCTCGCGATGTTTGGTACTTCGATTCTGCTGTTTATCAATCTGGTTTGCTCTTGCGTGTTTTCCAGGACAAACGCTACTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTGCTGTACGATTGGGCCGGCGATGGCGCGCCGCGGCGCTACTGCTCGTGGCGCGGCGTGCTCTGCGACAACGTCACCTTCGCCGTCGCGGCGCTGTGAGTTTCCTGCCAACCTATTGCTTGGCTTGCCTGGCTGCAGTGCCCGTGGTTACTGACGTGTTTTCTTGCGGTGGAATGCAGCAACCTCTCGGGGCTCAATCTTGGGGGCGAAATCTCCCCGGCCATCGGGAATCTGAAAAGCGTCGAGTCGATGTACGGTGGCACGTTGTCTCCTGGAATGAAATGTTTCTTTCATTCAGCTGCTTAATTAGTGTGCTCAACTCGTTCTCCCTGTTTGTTTGATTACATATATGCAGCGACTTGAAGTCGAATGAACTTTCTGGGCAGATCCCTGATGAGATTGGCGATTGCACGTCGCTTAAAACTCTGTAAGTGAGATTCAGTTTTGGTTCGCAGTGTTGTTTTGAGGATGTAGAACAGTAGAAGTAATGCGTGCCGCAACCCTCCCCTGTTCTTTTATTCAAGGGACCTGTCCTCTAACAATCTAGGAGGAGATATACCATTTTCCATATCTAAGCTGAAGCACCTTGAGAACTTGTAAGATTTACCCTGCTGAAACTTGGTGGAGGAGAAGTATTTTGCAGCATTTCTTTCATCGTAAGCACTGCTGTTACTTGAATATATAGGATCTTGAAGAACAACCAGCTGGTGGGGATGATCCCGTCGACACTCTCTCAGCTACCAAATTTGAAGATTTTGTAAGTTGCGGCTGAACTGTTCTGAGGGCTTAATTTGGATCAATTCTAATGTGATATATGCCCCAGGGACTTGGCTCAAAACAAGCTAAATGGTGAGATTCCGAGGTTAATCTACTGGAATGAGGTTCTTCAGTACTTGTGAGTACTAAGTAGTCGATGATTCTGTTCCCTACTTTAAAAAACTTCTTTTTTTTGTTTCAGTACTTAAACTGCAGACAATATGTAGGAGCTATTAGTGCTAATCAGATTTAGTTTGTGTAAATTATAGGCGGTTGAACATATGTAATGTAGGGCAAATAGTTCGGTAAGATCATATTGTCATATCCAATTGTGCTAATCTGATTTTCATATGACAGGGGATTACGGAGCAATAATTTAGAAGGAAGCCTCTCTCCTGAGATGTGCCAGTTGACTGGCCTGTGGTACTTGTGAGTGTATTGCTTCCTTTTGTTTATTATTAGCTCTACATGTTTGTTTTCTTTGTTCCTTTCACAAACTTGATTTTGTTTGACTTAGTGATGTGAAGAACAATAGCTTAACGGGTATAATACCAGATACTATTGGGAACTGTACGAGCTTTCAGGTCTTGTATGTACATACCTTCTACTCCTTCTGAATTATGTGTCCCCCTTTCTTTGACATGTCAATCATTCCTGACCTTATGGTATTTTTAGGGATCTGTCTTACAACCGGCTCACGGGAGAAATCCCATTCAACATTGGCTTCCTACAAGTGGCTACATTGTATGTGGTAGTCATTTTACTAACAAAAAGAGTATCCAACCTGTCGTAATTAATGAAACCAACTACTTGAACTGCTATGCACTATTTTGTACCAGGTCTTTGCAAGGGAACAATTTCTCTGGCCCTATTCCATCAGTAATTGGCCTTATGCAGGCGCTCGCAGTGCTGTAAGTCCAATGATAATTGATGTGCTTGTCTTAATTTATGGGCTGAGAGTGAGAGGTATTACCATAGCCCTTGAATGCAAGTTTTCACCTGTACCTTCTATTTGTTGATACAGTGATCTGAGTTTCAACCAATTGTCTGGGCCAATACCATCAATACTTGGCAACTTAACATACACTGAGAAACTGTAAGCCTGCCCTTGTGTGTGTGTTTTCCTAGCCTTTGAGAAATATAATATTCTTAATTATGTCAAGAAGTTAACATCATAGTATCTTGTTTTCTTAGGTACCTCCAAGGCAATAGGCTAACTGGATCAATACCACCCGAGCTTGGTAATATGTCGACACTTCATTACTTGTAAGCCTCTACCTTTAAAATTTTGTTGCTTCTTGATTGTTAATTGATTAGCGCACTACCCTCTTTTGAGACAATATCTGGTTTCAGAGAACTGAATGACAATCAGCTGACCGGGTTCATTCCGCCTGAGCTTGGAAAGTTGACGGGCTTATTTGATCTGTATAACTCTACTCATCCTTTATCAATTGATGCTTACCTGGAATGCTAAATCAGTCAGTGGACCATATCATTTGTTTTTCACAGGAACCTGGCAAACAACAACCTTGAAGGACCAATCCCTGATAATATAAGCTCATGCATGAATCTCATTAGCTTGTAAGTTTCATTTGTTCTCCTGAAGTTCTATATCCTCTCCGATGGCAGGGCACTTAACTTTAGCTTTGTAACAGCAATGCTTATGGCAATAAATTAAATGGGACCGTTCCACGTTCATTGCACAAACTTGAGAGTATAACTTATTTGTAAGTGTTATTGGTTTTAGGTGATTTTTCTTCAAGCCTGCTATAAATTTAGTTCTGTTCATAGTGTCTAATGATTTTTGTTTTCATCCTAACTTCTAGGAATCTATCATCAAACTATCTTAGTGGAGCCATTCCCATTGAACTAGCAAAAATGAAAAACTTGGACACATTGTAAGTACCAGAAGTTAATCTGCAATTGCTTTTGAATAAGTGATTCTCATGATATGACGTGTTTGCTGGATATATTTGAAGGGACTTATCCTGTAACATGGTTGCTGGTCCAATTCCCTCGGCAATTGGGAGCTTAGAGCATCTTTTGAGACTGTAAGTTCTATAATATTACTCCTTGTTATAAAAAAATAAAATAAAATACTTGTATCATGTCATGACAGCATTCTCTTATTCCTAAAGAAATTTTAGCAATAATAATTTGGTTGGATACATCCCTGCTGAGTTTGGAAACTTGAGGAGTATCATGGAGATGTAAGTACCTTCTCACCTAAATGCGTTGTCTGCTCTGTACCTTTGGGAGTAATGCAGATTCCTCTTCCTCTGTTTTAGTGATTTGTCTAGTAATCACCTTGGTGGTTTGATTCCACAAGAGGTTGGCATGCTGCAAAACCTGATATTGCTGTAAGTCTATGTTTTACCCTCTATCCTATAAAGTAGTATTGCATGGTTTCAAAAGGCTGTTTGCATTGGACTGCATATTAATTTGAGTATTCTGTTTCTCATTACTGCATATTGATTTACGTGAATTTTTTTTTGTCTTTTTTCAGAAAACTGGAAAGTAATAATATAACTGGGGATGTTTCTTCACTTATTAACTGCTTCAGTCTCAATGTCTTGTAAGTTATACACTTGAAAAGCAATATGAAATGATTTCACACAATTTTTTTTGGCCATGAACCTGTAAGCTTCATACTGATAGTGTGTTACTGCAGAAACGTATCATACAACAACCTGGCTGGCATTGTACCAACAGACAATAATTTTTCACGATTTTCACCGGACAGGTATTTTCCTTGGGGATTAATCGATCGCTTGAAAAAGAACTCGTAATACTTAGGCATCTCAGGCCTCATCAATAATCTGATCTTTAATTCAGCTTCTTGGGTAATCCTGGACTCTGTGGCTATTGGCTTGGTTCTTCGTGCTACTCCACCAGTCATGTGCAGAGATGTCAGTAAAATGTTACAGCTGTTGCGTTGCTCCGAAGTGTAACTTCACACTGATAAACTTTCTAATTTTATATCCTGGATTTTTATGCAGCCTCTGTCTCAAGGTCTGCAATTCTTGGGATTGCTGTAGCTGGGCTTGTTATCCTGCTGATGATCCTAGCTGCTGCTTGCTGGCCACACTGGGCACAAGTTCCCAAAGATGTGTCTTTATGTAAACCAGGTGATGCATCTGCAGAGGTCCCAGTCCATTGATTTTACCCATCAATTTCGGTAGCTGTTTGGCAAGTGTCCTCTCGTCACACTCAACCTTGCAAATGATCTATTACATGTCTCAGACTATTGCATATGTTCGCCCTCTACTTGATAGATGCATTTGGTTGTTAACAGAGTGATATTATTATTTTCCTGTGATAGATATCCATGCACTACCATCAAGTAATGTTCCTCCAAAGCTTGTAATCCTTCACATGAACATGGCATTCCTTGTGTACGAAGATATAATGAGGATGACTGAAAATTTGAGCGAGAAGTACATTATCGGGTATGGGGCATCAAGCACAGTGTACAAATGTGTACTGAAGAACTGCAAGCCGGTTGCAATAAAAAAATTGTATGCTCACTACCCACAGAGCCTGAAGGAATTCGAGACTGAGCTTGAGACTGTTGGAAGTATCAAGCACCGGAATCTTGTCAGCCTTCAAGGGTATTCCCTATCACCTGCTGGGAATCTTCTCTTCTACGACTACTTGGAAAATGGCAGTCTCTGGGATGTTTTACATGGTAAGTGAATTTTACATGGCAAACAAATACATAGGAACTGTAAGCAGAATAGTTGGTATTTAGAACGATTGTTCTTCTGGTTTGTATAGCCGTTGCCTGTTCATCTGTCAACAAGCACCACCTGATCACTTTCATATCAACTTGTTTGATGGTTTAATATTATTTGGATTAGGATATTTTCATGGAACATAAACAGCTGATAAGATTTCTGCAACTATAGCCTAATTAGCAATTTCTTTATTATTTTAGCAGGCTCATCCAAGAAGCAAAAACTAGATTGGGAGGCTAGGCTCCGGATTGCTCTTGGTGCGGCACAAGGTCTGGCTTATCTTCATCATGACTGCAACCCACGGATAATTCATAGGGATGTGAAGTCGAAGAATATCCTTCTAGACAAGGACTATGAAGCACATCTTGCCGACTTTGGTATTGCCAAGAGCTTGTGCACCTCAAAGACACACACATCAACCTATGTGATGGGTACTATAGGCTACATTGACCCTGAGTACGCATGCACATCCCGCCTCAACGAGAAATCGGATGTCTACAGCTATGGCATTGTCCTCCTGGAGCTACTTACAGGCAAAAAGCCAGTCGATAATGAGTGCAATCTCCATCACTTGGTAACTATTTTTCCATTCGCTTGCTACTGTTTATTTGAAAACTTGTTCCTTTCCTTCACCATATACTCTTGCATTTGAGGTTCAATAAGTGCACAATCATGGGCATTATCAGGTCTGTGTTCCTTCAAGGGGACCACGCATGAATCCTACCATGTGAGTAGATCTATATACACTGTGGCGGACCTGGTAGTGTGTGATTCATTGTATGGCTGGTGAAAGCTCTATCATAACTTGCCAGTGTCCCATAAAGCCTGCCATATTTGTCCCCCGCCTTCAATCATGTGGGTGAACATTTACAGGCAACACACACCTGTCAAAAACTGTAGCTAACTATGACTGTACTAGTTATTTTGATCACTGACATGCTGGTAACTTATCGGAAGAATTTACCCTGTCAATCCTGAACATCTCTTTTTGAAAGAAAACGGCAAAAGGTGAATTAAAATTTGTATTTCTACCAGCCCACAGGTCCAGTACGGAATAGTGCAACTGTAAACAGTCGATTTTAGCGATGAACTTCCTGGTTTGCATGAATGCTGTTTATGCTCATTGGTTGCTTCTCTGCAGATCCTATCCAAAGCCGCAGACAACACGGTCATGGAGATGGTCGACCCAGACATCGCCGATACGTGCAAAGATCTTGGCGAGGTCAAGAAGGTGTTCCAGTTGGCGCTCCTTTGCAGCAAGAGGCAGCCTTCTGATCGACCGACGATGCACGAGGTCGTGCGTGTCCTGGACTGCCTCGTCTACCCCGACCCGCCCTCAAAGCCGGCACTGCCACCGGCATTGCCACAGTCGTCCACGGTTCCGAGCTATGTCAACGAGTACGTGAGCCTACGAGGCGGCAGCACGCTCTCCTGTGAAAATTCGTCGAGCGCGTCAGATGCGGAGCTCTTCCTGAAGTTCGGCGAGGTGATATCACAGAACACAGAGTAGAGTGACTATCTGAATATCCTGATGGCTTTGTGCTTTGTGGCGTTGGCGTTCTAGCTAAGTTACCAGCTTTTGTGTCCTTCCTGGAATAAGAAGGGACACCGACGAAGGGCTGGCTATTCGCTGCTGTAAATATGCTGTCTTCTGGTTTGTTAGGCCTTCGGAAAGCTATTTGGCCTTCCTGTTTTGATCAGTTTTTCTTCTTATCATTATTAGTTAGTGGGGTTTGGATGAGGTGAACTGTATTAAGGCCTCCTGGGAGTATGAATTTTGTAAGCACGGGTCAGTTAAAAATATCGCAGTGATCGGGAAAAATCCGCCTCTTATAAAATTGGTTTTGTTGGATAA
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| CDS seq | ATGACGACGACCACCACCACTCGCCTCCTCCTCGCTGCCATTCTCCTCGCGGTGGCCGCCGCCGACGATGACGGACAAACGCTACTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTGCTGTACGATTGGGCCGGCGATGGCGCGCCGCGGCGCTACTGCTCGTGGCGCGGCGTGCTCTGCGACAACGTCACCTTCGCCGTCGCGGCGCTCAACCTCTCGGGGCTCAATCTTGGGGGCGAAATCTCCCCGGCCATCGGGAATCTGAAAAGCGTCGAGTCGATCGACTTGAAGTCGAATGAACTTTCTGGGCAGATCCCTGATGAGATTGGCGATTGCACGTCGCTTAAAACTCTGGACCTGTCCTCTAACAATCTAGGAGGAGATATACCATTTTCCATATCTAAGCTGAAGCACCTTGAGAACTTGATCTTGAAGAACAACCAGCTGGTGGGGATGATCCCGTCGACACTCTCTCAGCTACCAAATTTGAAGATTTTGGACTTGGCTCAAAACAAGCTAAATGGTGAGATTCCGAGGTTAATCTACTGGAATGAGGTTCTTCAGTACTTGGGATTACGGAGCAATAATTTAGAAGGAAGCCTCTCTCCTGAGATGTGCCAGTTGACTGGCCTGTGGTACTTTGATGTGAAGAACAATAGCTTAACGGGTATAATACCAGATACTATTGGGAACTGTACGAGCTTTCAGGTCTTGGATCTGTCTTACAACCGGCTCACGGGAGAAATCCCATTCAACATTGGCTTCCTACAAGTGGCTACATTGTCTTTGCAAGGGAACAATTTCTCTGGCCCTATTCCATCAGTAATTGGCCTTATGCAGGCGCTCGCAGTGCTTGATCTGAGTTTCAACCAATTGTCTGGGCCAATACCATCAATACTTGGCAACTTAACATACACTGAGAAACTGTACCTCCAAGGCAATAGGCTAACTGGATCAATACCACCCGAGCTTGGTAATATGTCGACACTTCATTACTTAGAACTGAATGACAATCAGCTGACCGGGTTCATTCCGCCTGAGCTTGGAAAGTTGACGGGCTTATTTGATCTGAACCTGGCAAACAACAACCTTGAAGGACCAATCCCTGATAATATAAGCTCATGCATGAATCTCATTAGCTTCAATGCTTATGGCAATAAATTAAATGGGACCGTTCCACGTTCATTGCACAAACTTGAGAGTATAACTTATTTGAATCTATCATCAAACTATCTTAGTGGAGCCATTCCCATTGAACTAGCAAAAATGAAAAACTTGGACACATTGGACTTATCCTGTAACATGGTTGCTGGTCCAATTCCCTCGGCAATTGGGAGCTTAGAGCATCTTTTGAGACTAAATTTTAGCAATAATAATTTGGTTGGATACATCCCTGCTGAGTTTGGAAACTTGAGGAGTATCATGGAGATTGATTTGTCTAGTAATCACCTTGGTGGTTTGATTCCACAAGAGGTTGGCATGCTGCAAAACCTGATATTGCTAAAACTGGAAAGTAATAATATAACTGGGGATGTTTCTTCACTTATTAACTGCTTCAGTCTCAATGTCTTAAACGTATCATACAACAACCTGGCTGGCATTGTACCAACAGACAATAATTTTTCACGATTTTCACCGGACAGCTTCTTGGGTAATCCTGGACTCTGTGGCTATTGGCTTGGTTCTTCGTGCTACTCCACCAGTCATGTGCAGAGATCCTCTGTCTCAAGGTCTGCAATTCTTGGGATTGCTGTAGCTGGGCTTGTTATCCTGCTGATGATCCTAGCTGCTGCTTGCTGGCCACACTGGGCACAAGTTCCCAAAGATGTGTCTTTATGTAAACCAGATATCCATGCACTACCATCAAGTAATGTTCCTCCAAAGCTTGTAATCCTTCACATGAACATGGCATTCCTTGTGTACGAAGATATAATGAGGATGACTGAAAATTTGAGCGAGAAGTACATTATCGGGTATGGGGCATCAAGCACAGTGTACAAATGTGTACTGAAGAACTGCAAGCCGGTTGCAATAAAAAAATTGTATGCTCACTACCCACAGAGCCTGAAGGAATTCGAGACTGAGCTTGAGACTGTTGGAAGTATCAAGCACCGGAATCTTGTCAGCCTTCAAGGGTATTCCCTATCACCTGCTGGGAATCTTCTCTTCTACGACTACTTGGAAAATGGCAGTCTCTGGGATGTTTTACATGCAGGCTCATCCAAGAAGCAAAAACTAGATTGGGAGGCTAGGCTCCGGATTGCTCTTGGTGCGGCACAAGGTCTGGCTTATCTTCATCATGACTGCAACCCACGGATAATTCATAGGGATGTGAAGTCGAAGAATATCCTTCTAGACAAGGACTATGAAGCACATCTTGCCGACTTTGGTATTGCCAAGAGCTTGTGCACCTCAAAGACACACACATCAACCTATGTGATGGGTACTATAGGCTACATTGACCCTGAGTACGCATGCACATCCCGCCTCAACGAGAAATCGGATGTCTACAGCTATGGCATTGTCCTCCTGGAGCTACTTACAGGCAAAAAGCCAGTCGATAATGAGTGCAATCTCCATCACTTGATCCTATCCAAAGCCGCAGACAACACGGTCATGGAGATGGTCGACCCAGACATCGCCGATACGTGCAAAGATCTTGGCGAGGTCAAGAAGGTGTTCCAGTTGGCGCTCCTTTGCAGCAAGAGGCAGCCTTCTGATCGACCGACGATGCACGAGGTCGTGCGTGTCCTGGACTGCCTCGTCTACCCCGACCCGCCCTCAAAGCCGGCACTGCCACCGGCATTGCCACAGTCGTCCACGGTTCCGAGCTATGTCAACGAGTACGTGAGCCTACGAGGCGGCAGCACGCTCTCCTGTGAAAATTCGTCGAGCGCGTCAGATGCGGAGCTCTTCCTGAAGTTCGGCGAGGTGATATCACAGAACACAGAGTAG
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| Protein seq | MTTTTTTRLLLAAILLAVAAADDDGQTLLEIKKSFRNVDNVLYDWAGDGAPRRYCSWRGVLCDNVTFAVAALNLSGLNLGGEISPAIGNLKSVESIDLKSNELSGQIPDEIGDCTSLKTLDLSSNNLGGDIPFSISKLKHLENLILKNNQLVGMIPSTLSQLPNLKILDLAQNKLNGEIPRLIYWNEVLQYLGLRSNNLEGSLSPEMCQLTGLWYFDVKNNSLTGIIPDTIGNCTSFQVLDLSYNRLTGEIPFNIGFLQVATLSLQGNNFSGPIPSVIGLMQALAVLDLSFNQLSGPIPSILGNLTYTEKLYLQGNRLTGSIPPELGNMSTLHYLELNDNQLTGFIPPELGKLTGLFDLNLANNNLEGPIPDNISSCMNLISFNAYGNKLNGTVPRSLHKLESITYLNLSSNYLSGAIPIELAKMKNLDTLDLSCNMVAGPIPSAIGSLEHLLRLNFSNNNLVGYIPAEFGNLRSIMEIDLSSNHLGGLIPQEVGMLQNLILLKLESNNITGDVSSLINCFSLNVLNVSYNNLAGIVPTDNNFSRFSPDSFLGNPGLCGYWLGSSCYSTSHVQRSSVSRSAILGIAVAGLVILLMILAAACWPHWAQVPKDVSLCKPDIHALPSSNVPPKLVILHMNMAFLVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYAHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPAGNLLFYDYLENGSLWDVLHAGSSKKQKLDWEARLRIALGAAQGLAYLHHDCNPRIIHRDVKSKNILLDKDYEAHLADFGIAKSLCTSKTHTSTYVMGTIGYIDPEYACTSRLNEKSDVYSYGIVLLELLTGKKPVDNECNLHHLILSKAADNTVMEMVDPDIADTCKDLGEVKKVFQLALLCSKRQPSDRPTMHEVVRVLDCLVYPDPPSKPALPPALPQSSTVPSYVNEYVSLRGGSTLSCENSSSASDAELFLKFGEVISQNTE |
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| Function | LRR receptor-like serine/threonine-protein kinase ER2 [UniProtKB/Swiss-Prot:I1Z695] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0777400 | Os02t0777400-01 | Chr02 | 32882405 | 32889742 | + | irgsp1_rep | ||
| CDS seq | ATGACGACGACCACCACCACTCGCCTCCTCCTCGCTGCCATTCTCCTCGCGGTGGCCGCCGCCGACGATGACGGACAAACGCTACTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTGCTGTACGATTGGGCCGGCGATGGCGCGCCGCGGCGCTACTGCTCGTGGCGCGGCGTGCTCTGCGACAACGTCACCTTCGCCGTCGCGGCGCTCAACCTCTCGGGGCTCAATCTTGGGGGCGAAATCTCCCCGGCCATCGGGAATCTGAAAAGCGTCGAGTCGATCGACTTGAAGTCGAATGAACTTTCTGGGCAGATCCCTGATGAGATTGGCGATTGCACGTCGCTTAAAACTCTGGACCTGTCCTCTAACAATCTAGGAGGAGATATACCATTTTCCATATCTAAGCTGAAGCACCTTGAGAACTTGATCTTGAAGAACAACCAGCTGGTGGGGATGATCCCGTCGACACTCTCTCAGCTACCAAATTTGAAGATTTTGGACTTGGCTCAAAACAAGCTAAATGGTGAGATTCCGAGGTTAATCTACTGGAATGAGGTTCTTCAGTACTTGGGATTACGGAGCAATAATTTAGAAGGAAGCCTCTCTCCTGAGATGTGCCAGTTGACTGGCCTGTGGTACTTTGATGTGAAGAACAATAGCTTAACGGGTATAATACCAGATACTATTGGGAACTGTACGAGCTTTCAGGTCTTGGATCTGTCTTACAACCGGCTCACGGGAGAAATCCCATTCAACATTGGCTTCCTACAAGTGGCTACATTGTCTTTGCAAGGGAACAATTTCTCTGGCCCTATTCCATCAGTAATTGGCCTTATGCAGGCGCTCGCAGTGCTTGATCTGAGTTTCAACCAATTGTCTGGGCCAATACCATCAATACTTGGCAACTTAACATACACTGAGAAACTGTACCTCCAAGGCAATAGGCTAACTGGATCAATACCACCCGAGCTTGGTAATATGTCGACACTTCATTACTTAGAACTGAATGACAATCAGCTGACCGGGTTCATTCCGCCTGAGCTTGGAAAGTTGACGGGCTTATTTGATCTGAACCTGGCAAACAACAACCTTGAAGGACCAATCCCTGATAATATAAGCTCATGCATGAATCTCATTAGCTTCAATGCTTATGGCAATAAATTAAATGGGACCGTTCCACGTTCATTGCACAAACTTGAGAGTATAACTTATTTGAATCTATCATCAAACTATCTTAGTGGAGCCATTCCCATTGAACTAGCAAAAATGAAAAACTTGGACACATTGGACTTATCCTGTAACATGGTTGCTGGTCCAATTCCCTCGGCAATTGGGAGCTTAGAGCATCTTTTGAGACTAAATTTTAGCAATAATAATTTGGTTGGATACATCCCTGCTGAGTTTGGAAACTTGAGGAGTATCATGGAGATTGATTTGTCTAGTAATCACCTTGGTGGTTTGATTCCACAAGAGGTTGGCATGCTGCAAAACCTGATATTGCTAAAACTGGAAAGTAATAATATAACTGGGGATGTTTCTTCACTTATTAACTGCTTCAGTCTCAATGTCTTAAACGTATCATACAACAACCTGGCTGGCATTGTACCAACAGACAATAATTTTTCACGATTTTCACCGGACAGCTTCTTGGGTAATCCTGGACTCTGTGGCTATTGGCTTGGTTCTTCGTGCTACTCCACCAGTCATGTGCAGAGATCCTCTGTCTCAAGGTCTGCAATTCTTGGGATTGCTGTAGCTGGGCTTGTTATCCTGCTGATGATCCTAGCTGCTGCTTGCTGGCCACACTGGGCACAAGTTCCCAAAGATGTGTCTTTATGTAAACCAGATATCCATGCACTACCATCAAGTAATGTTCCTCCAAAGCTTGTAATCCTTCACATGAACATGGCATTCCTTGTGTACGAAGATATAATGAGGATGACTGAAAATTTGAGCGAGAAGTACATTATCGGGTATGGGGCATCAAGCACAGTGTACAAATGTGTACTGAAGAACTGCAAGCCGGTTGCAATAAAAAAATTGTATGCTCACTACCCACAGAGCCTGAAGGAATTCGAGACTGAGCTTGAGACTGTTGGAAGTATCAAGCACCGGAATCTTGTCAGCCTTCAAGGGTATTCCCTATCACCTGCTGGGAATCTTCTCTTCTACGACTACTTGGAAAATGGCAGTCTCTGGGATGTTTTACATGCAGGCTCATCCAAGAAGCAAAAACTAGATTGGGAGGCTAGGCTCCGGATTGCTCTTGGTGCGGCACAAGGTCTGGCTTATCTTCATCATGACTGCAACCCACGGATAATTCATAGGGATGTGAAGTCGAAGAATATCCTTCTAGACAAGGACTATGAAGCACATCTTGCCGACTTTGGTATTGCCAAGAGCTTGTGCACCTCAAAGACACACACATCAACCTATGTGATGGGTACTATAGGCTACATTGACCCTGAGTACGCATGCACATCCCGCCTCAACGAGAAATCGGATGTCTACAGCTATGGCATTGTCCTCCTGGAGCTACTTACAGGCAAAAAGCCAGTCGATAATGAGTGCAATCTCCATCACTTGATCCTATCCAAAGCCGCAGACAACACGGTCATGGAGATGGTCGACCCAGACATCGCCGATACGTGCAAAGATCTTGGCGAGGTCAAGAAGGTGTTCCAGTTGGCGCTCCTTTGCAGCAAGAGGCAGCCTTCTGATCGACCGACGATGCACGAGGTCGTGCGTGTCCTGGACTGCCTCGTCTACCCCGACCCGCCCTCAAAGCCGGCACTGCCACCGGCATTGCCACAGTCGTCCACGGTTCCGAGCTATGTCAACGAGTACGTGAGCCTACGAGGCGGCAGCACGCTCTCCTGTGAAAATTCGTCGAGCGCGTCAGATGCGGAGCTCTTCCTGAAGTTCGGCGAGGTGATATCACAGAACACAGAGTAG
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| Protein seq | MTTTTTTRLLLAAILLAVAAADDDGQTLLEIKKSFRNVDNVLYDWAGDGAPRRYCSWRGVLCDNVTFAVAALNLSGLNLGGEISPAIGNLKSVESIDLKSNELSGQIPDEIGDCTSLKTLDLSSNNLGGDIPFSISKLKHLENLILKNNQLVGMIPSTLSQLPNLKILDLAQNKLNGEIPRLIYWNEVLQYLGLRSNNLEGSLSPEMCQLTGLWYFDVKNNSLTGIIPDTIGNCTSFQVLDLSYNRLTGEIPFNIGFLQVATLSLQGNNFSGPIPSVIGLMQALAVLDLSFNQLSGPIPSILGNLTYTEKLYLQGNRLTGSIPPELGNMSTLHYLELNDNQLTGFIPPELGKLTGLFDLNLANNNLEGPIPDNISSCMNLISFNAYGNKLNGTVPRSLHKLESITYLNLSSNYLSGAIPIELAKMKNLDTLDLSCNMVAGPIPSAIGSLEHLLRLNFSNNNLVGYIPAEFGNLRSIMEIDLSSNHLGGLIPQEVGMLQNLILLKLESNNITGDVSSLINCFSLNVLNVSYNNLAGIVPTDNNFSRFSPDSFLGNPGLCGYWLGSSCYSTSHVQRSSVSRSAILGIAVAGLVILLMILAAACWPHWAQVPKDVSLCKPDIHALPSSNVPPKLVILHMNMAFLVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYAHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPAGNLLFYDYLENGSLWDVLHAGSSKKQKLDWEARLRIALGAAQGLAYLHHDCNPRIIHRDVKSKNILLDKDYEAHLADFGIAKSLCTSKTHTSTYVMGTIGYIDPEYACTSRLNEKSDVYSYGIVLLELLTGKKPVDNECNLHHLILSKAADNTVMEMVDPDIADTCKDLGEVKKVFQLALLCSKRQPSDRPTMHEVVRVLDCLVYPDPPSKPALPPALPQSSTVPSYVNEYVSLRGGSTLSCENSSSASDAELFLKFGEVISQNTE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0777400 | RBH | 0.0 | 0.0 | 5.005215 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g53720 | RBH | 0.0 | 0.0 | 1.033815 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0203800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0035660 | RBH | 0.026422 | 0.0 | 11.536481 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0035760 | RBH | 0.000000 | 0.0 | 4.930929 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0035640 | RBH | 0.081022 | 0.0 | 17.592972 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035200 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0035320 | RBH | 0.0 | 0.0 | 20.848778 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0537900 | RBH | 7.994918 | 0.128745 | 38.89032 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035160 | RBH | 0.0 | 0.0 | 2.117641 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0568300 | RBH | 8.568282 | 0.031409 | 81.16082 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0035410 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0035240 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0035490 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0035450 | RBH | 0.0 | 0.0 | 1.661330 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035030 | RBH | 0.068999 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G035700 | RBH | 0.0 | 0.0 | 8.810646 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0035410 | RBH | 0.0 | 0.0 | 6.637568 |
