Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0607500 | OGI:02067830 | 14/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:23821241-23826110 | ||||||||
| Gene Symbol | OsPP2C22, PP2C22, OsPP33 | ||||||||||
| DNA seq | CTAAGGCTGGCCAAACAGCAGCGCCAGTGCTTCTCCGTCAAGCGCGTCATCGAGGTCGAGTTGCTGCTCGCCACCGCCCTCTGGGTTGTGCTGATGTTGCTCAGCCACGGCGGCGCCGCCGGCGACTTCGTCGGAGCCCTCCTGGATGTCGGGCAGAACAGGGATCGGCTGGCCGGTGCCGCCGGCGACTTCGTCGGAGACCTGCTGGATGTTGGGCAGGACAGGGATCGGCTGGTCGGCGCCGCCGGCGACTTCGTCGGAGCCCTCCTGGATGTTGGGCAGGGCAGGGATCGGCTGGTCGGCGCCTGGCTTGAACTGGACCAGTATGGCCGTCGCGTTGTTCCTCGATTCCAGGCAATTCTCGACGAGCTTCTCGCAAGTGGTGTGTAGAGTTTCCTCCCCCTGTGCGATTACAATTTACAGGCATATGTCAGATGCAACGGGAATAACAGTTCTACCAACAGATGAATGAACTTCGTTACTCCTGTAGCTGTTGATCATATATAGCTCGGTAATTGGTAATTGAATGTTAGATTGCCTTCAGCTCCATCAAATCAAAAGGAGAAAGGAAAGTAAAATAATTGCAGCTTTAACATAAACTTCATAGACGATATGGAATGAAAGGATCAATAAAAGAATTTTCCAAGGAGAAAGCAAAAATGTGGGCGAACATAGCTACTTAGTCGTCCAAGACTTAAACCAAACCTTTTCGCCGGAAGACTTAAAACCAAACTTGAATAGCACTGTTTCTTACCAGTGTTGTTGTATTTGGAGCTATGTTCTTGTTTGTGGCTAATTGGCTATCCTCTGTAAAGCATTCTCTTTTCTTTCCCTGATTTATCAAACTTTGACAGAGCTCTTGCCTTCGCTAAAAGAACAAAAGAAAAAAAAAGAAAAAGAATGCACTGCAAACATCCTATGATCTTCATATGTAGACTTTAGATTTCAATTGCCTGTCATCCAAGCAGATCGCATGCACATATGTGTTTAAAATCAGAGTAAACATTTCTTGATTTAAGAACACATATATGTAGGTAACTACTAGAACTTGATTCATTAGAAAAAAAATGCATAGCTGTCATAACATGTAGAGAAAATGAGGACTCACCGAGTTTAATTTCTCATGTACGAAATCAACCACATCCTGACTTGACATGTGATCCCTGAAAGGGAAAAATGTGTTTAAGTCTACTATGAGAATTTGAATGGAACTGTAAAAAAATAACAGGAGAGAAAATAAATTTGCCAATGAGAAATGTGCATCAGATCGTGAAAATATGTGGCAGATTGCAATCCTTTATCAATAGTACTAGCACTGATACAAGATATATCCTGCAACTTAGCAGAATTCCTACCAGCGTAAATGTTCCATGAAGTGAGATGGTTCTTGAAGAATGCTCTGGCAGTATAAATAAGGGGACCGGTAGCCATTTCCAACATACTAAGCCTATCAGACACTGAGCCATCAAGTAAAATAACTATCTGAATATTATGAAACACAGCTAGTGTAGGGATCGGCAGGTCTTCCTCTTTTCAGTAGATTCAACCTCTCCAGGGATAGCATTTAACTCAGAAAAAGAACGCAATATTCTTGGCCACGAAAAAACATACGTAACTACACATGGTGGTGAAATAGATTAGATACCAGTCCAGGCTACATCCAATTTAAATTAAACCAAAATGTACAAACTCTTGTGAAAAAAATAATACTGTCCTAGAAGAAAGAAGCAAGCTAGTAAGTCAACTGTCACTGACTGGATATACTCTGCATGAAGACCTACCAGATGCCGTCACTTGCTATGACAAGAAATTCAGTATCACCAGTTATTTTCGCCTAACAAAAAATCCCATCAGATCAGACCCAGCAAAACAAATTTATAGTCCTCTAAAAGAACTTGGTTTACACTTACAACACGAATGTCAGGAAAATGTGTCACCATTTGATATTGAGGACGATAAACTATGTTCTTATATGCAAAATCACCTGAAATGGTAGTGAGGAAAATGCCAGCTACAATACAATAGATTTTAGTAAGAACTACCAAAAGGAAATAAGATTAAATTATACCAAGTGCTCTGGACGTGGATAGCTTTCCTTCAATACAATATGGACCCCACTGTTCCCTGATTTCCCCTCCTGAGTCTTTTGCAGGAAATTTTTCCCTCCATACTTGTCCTCCTACTCTTAGAATTCTCTGACGTTCAAGTGGAACGTTTGGTTTGTGATCAGTGGATAAATCAATTGCCTTTTAATGCAATGAAAAATACAGAAAACAGAATAATTAGGCACAGATTTAATGCATTAGCCATTAGGTATGACAGAATGAAGAAATGAGGCATTTGACAAGGAAAAAGTTACTACACCTGACCATTCTTTGAAAGCACGCAACGGGAATCGCCAACATTTCCAACAGTGATCTGATTTCCTCTAATGATTACCACACATGCTGTGCTTCCTTCATATGACGGCAGCTTGTAAGAAACTGCCTGGGGGGACAAAAATACCAACTGAAGTGTAATACAAAGAATTCAACAGATCCTTGAAATAAAAAGACTATAAAAAGCTGTGAAATGACTCTAGCAAAAAAAATGACATTCATAAAAGAAGGAATGCACAAAAGACATGATGAGCCCAGTATAGTGACATATAAAAAAAAACATAATTCGGGTAGTAGTATAAGTGGATAACAACCACAGTGCAGCAATAACTTAACAAGCTTTTGGATTCTGACTCTGTAAAACAGGCACTTGACATAATGACTGGGTATCTTGAAACAGATAAATACAGACTTCATACGCACACTATATGACTAGAAATAAATCTTTGATTAACTTCTGTGCAGTAGGATGTGTAAAGAACAATCATAAGTTGATATATCACCTCTGAGGAACGCCACACGTTAGCACAACTGCCAGTACTGAGGAACTGGAAACAGTCACTAGACTCGCTACTCGACTCACTACTACGATGGGGATAAAGTGACGCCCTCCATACATTTGGTGCTTCCAATTCATCATCAAGTCTGCAGTTAAGAAGGAACACTGATTACATAATTCATTGTTTGCTTGTCCAACAAACGAAACTAGATTTTTCAAGACATTGCAACTATGAAGACAATGGGTACAACGATGTCCCACTCTTTTTTCCACAAAGGAAAAGGGAGTGAACTTATGTAGCGCAATATGCAGAGTACATGGAACAAATATCTATAAAAAAAACCTGGAGCACACAGATGTAATTGCATAGGACAGATTGTTGAGAAAGCTTTCTTCCTCGCGAAGCATAACATGAAATCGTTTTGCACAGTACATTGCTACTTCAGCTCCTGAATAGAAAAGGTAAAAAAACTCAGTTTGGTCATCTTATAAGATAGAGAGTGAAGCATAAATAAAATAAAATCCTGTGGTCCTAAAATCTTTAATAGGAAACAGACCTTATAGATATCAGTCGACATATTGCTATTGTGTACACAAATGCACACTATCTTTACATTTTAGAGTATTGTGAATTCTATGATATTTTAACCAATGCATGAAGGTATGTTATGCTAACAGATGAATTGTTTGACATTTGTTAGAAAAGATGAGAATGAAGATCAAACCTCCATGGCCATCGTACACACCAAAGAACGATGTGCTCTTTAACGCATCTAGATCTAGTTCAACTGCAAGCTAGATAATAAGAAAGGTACAAATCAAGCTAGTGTTTGACCACAATCACTTGCAATGACACCTTTTTTTTTCTGTAGGGCTATGAGCGCAGTAAAATTGATAAAAGGAGTGTTTGATTACTCACAGCATCTTGCATGCTCATACGCAATCCTTGCATAGCTGATGAGGCATACTTAACTCTGTCATTCTCTCCTTCATTAGTAACCTTCGATGTTAATGGACGTTTGGTACTGGTCGATGCACCCATGGCAGAACTTGCTTTCCTAGCAAAGACCAAAGAGTACTGTGAACAACAGTGTACATATGTTTAACCAAACATTGTTCAATACTGATCCAGGTCGATCACTACGTCTTGAAAAGAATGGATTATCAAAATGGCAAGCTTCTCAACATTTGAGAACCCAAAACACATCTAAAAGTTTGTGTCAAGAACAAATGCAGCAGTCTGCAGTGCACATGATCATTAGAAGGGGAGAAATATTAAATTCACAGGCTAAGATCCCCCTCTCAAATTTCAATAATATCTGCTACGGGGTTTCACACCATACACAGGGGAAGTGAAACATCAATAAATGTTACACCCAACAGCAAGAAAACGGACGTACAGGTAGCGCCATTGAGTAAGAGATCAATGGGTTTCCCCCGTGCGCAGCAGCATCGTCAAGAATTTTCCGCATGCACAGCATCACAAAAATTAACGAGAACAAGAGCAATCAAAAGAGCGTCAAAACCCACAGTTGTAGAAAAAAGGGAAGAACACCCACATGCAGAAAGAATCTGGAACAGCAACATACCAAAAGAAGTAAGCAGAGATACACGAGACGAGCAGAGATATCACATCATCGAGCTGCCATGTGTACATCAATAACGCCAGGAAAAGCAGCACGAAAAAGGCATTGATAGAACCGGGATGATGAACTCACGAACTGATGAACACTATCCAGTTGCAAGAAGGGGCGCAAATACAGATCACCATGGGGGTCGTAGTGCTCGTTAGGATCTCCTCGAACAGAGCACAGACCAACTGAAACAGAAACAAACAACTAAAGCAATCTCCAAGCAAAGGAGACAACATAGATCACCATAGGTCTTGGTGCTCGTCACCTCCAAGCAATCTGCCACCAACGTCGAAATCAGCAGGAACAGCAACAACAAGCGCAAGCAAGACAGAAGAAAAGAGGGGGACAGAGATCACCAT
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| CDS seq | ATGGTGATCTCTGTCCCCCTCTTTTCTTCTGTCTTGCTTGCGCTTGTTGTTGCTGTTCCTGCTGATTTCGACGTTGGTGGCAGATTGCTTGGAGTTGGTCTGTGCTCTGTTCGAGGAGATCCTAACGAGCACTACGACCCCCATGGTGATCTGTATTTGCGCCCCTTCTTGCAACTGGATAGTGTTCATCAGTTCTACTCTTTGGTCTTTGCTAGGAAAGCAAGTTCTGCCATGGGTGCATCGACCAGTACCAAACGTCCATTAACATCGAAGGTTACTAATGAAGGAGAGAATGACAGAGTTAAGTATGCCTCATCAGCTATGCAAGGATTGCGTATGAGCATGCAAGATGCTCTTGCAGTTGAACTAGATCTAGATGCGTTAAAGAGCACATCGTTCTTTGGTGTGTACGATGGCCATGGAGGAGCTGAAGTAGCAATGTACTGTGCAAAACGATTTCATGTTATGCTTCGCGAGGAAGAAAGCTTTCTCAACAATCTGTCCTATGCAATTACATCTGTGTGCTCCAGACTTGATGATGAATTGGAAGCACCAAATGTATGGAGGGCGTCACTTTATCCCCATCGTAGTAGTGAGTCGAGTAGCGAGTCTAGTGACTGTTTCCAGTTCCTCAGTACTGGCAGTTGTGCTAACGTGTGGCGTTCCTCAGAGGCAGTTTCTTACAAGCTGCCGTCATATGAAGGAAGCACAGCATGTGTGGTAATCATTAGAGGAAATCAGATCACTGTTGGAAATGTTGGCGATTCCCGTTGCGTGCTTTCAAAGAATGGTCAGGCAATTGATTTATCCACTGATCACAAACCAAACGTTCCACTTGAACGTCAGAGAATTCTAAGAGTAGGAGGACAAGTATGGAGGGAAAAATTTCCTGCAAAAGACTCAGGAGGGGAAATCAGGGAACAGTGGGGTCCATATTGTATTGAAGGAAAGCTATCCACGTCCAGAGCACTTGCTGGCATTTTCCTCACTACCATTTCAGGTGATTTTGCATATAAGAACATAGTTTATCGTCCTCAATATCAAATGGTGACACATTTTCCTGACATTCGTGTTGCGAAAATAACTGGTGATACTGAATTTCTTGTCATAGCAAGTGACGGCATCTGTTCCATTCAAATTCTCATAGTAGACTTAAACACATTTTTCCCTTTCAGGGATCACATGTCAAGTCAGGATGTGGTTGATTTCGTACATGAGAAATTAAACTCGCGAAGGCAAGAGCTCTGTCAAAGTTTGATAAATCAGGGAAAGAAAAGAGAATGCTTTACAGAGGATAGCCAATTAGCCACAAACAAGAACATAGCTCCAAATACAACAACACTGGGGGAGGAAACTCTACACACCACTTGCGAGAAGCTCGTCGAGAATTGCCTGGAATCGAGGAACAACGCGACGGCCATACTGGTCCAGTTCAAGCCAGGCGCCGACCAGCCGATCCCTGCCCTGCCCAACATCCAGGAGGGCTCCGACGAAGTCGCCGGCGGCGCCGACCAGCCGATCCCTGTCCTGCCCAACATCCAGCAGGTCTCCGACGAAGTCGCCGGCGGCACCGGCCAGCCGATCCCTGTTCTGCCCGACATCCAGGAGGGCTCCGACGAAGTCGCCGGCGGCGCCGCCGTGGCTGAGCAACATCAGCACAACCCAGAGGGCGGTGGCGAGCAGCAACTCGACCTCGATGACGCGCTTGACGGAGAAGCACTGGCGCTGCTGTTTGGCCAGCCTTAG
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| Protein seq | MVISVPLFSSVLLALVVAVPADFDVGGRLLGVGLCSVRGDPNEHYDPHGDLYLRPFLQLDSVHQFYSLVFARKASSAMGASTSTKRPLTSKVTNEGENDRVKYASSAMQGLRMSMQDALAVELDLDALKSTSFFGVYDGHGGAEVAMYCAKRFHVMLREEESFLNNLSYAITSVCSRLDDELEAPNVWRASLYPHRSSESSSESSDCFQFLSTGSCANVWRSSEAVSYKLPSYEGSTACVVIIRGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRILRVGGQVWREKFPAKDSGGEIREQWGPYCIEGKLSTSRALAGIFLTTISGDFAYKNIVYRPQYQMVTHFPDIRVAKITGDTEFLVIASDGICSIQILIVDLNTFFPFRDHMSSQDVVDFVHEKLNSRRQELCQSLINQGKKRECFTEDSQLATNKNIAPNTTTLGEETLHTTCEKLVENCLESRNNATAILVQFKPGADQPIPALPNIQEGSDEVAGGADQPIPVLPNIQQVSDEVAGGTGQPIPVLPDIQEGSDEVAGGAAVAEQHQHNPEGGGEQQLDLDDALDGEALALLFGQP |
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| Function | Putative protein phosphatase 2C 22 [UniProtKB/Swiss-Prot:A3A8W6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0607500 | Os02t0607500-00 | Chr02 | 23821241 | 23826110 | - | irgsp1_rep | ||
| CDS seq | ATGGTGATCTCTGTCCCCCTCTTTTCTTCTGTCTTGCTTGCGCTTGTTGTTGCTGTTCCTGCTGATTTCGACGTTGGTGGCAGATTGCTTGGAGTTGGTCTGTGCTCTGTTCGAGGAGATCCTAACGAGCACTACGACCCCCATGGTGATCTGTATTTGCGCCCCTTCTTGCAACTGGATAGTGTTCATCAGTTCTACTCTTTGGTCTTTGCTAGGAAAGCAAGTTCTGCCATGGGTGCATCGACCAGTACCAAACGTCCATTAACATCGAAGGTTACTAATGAAGGAGAGAATGACAGAGTTAAGTATGCCTCATCAGCTATGCAAGGATTGCGTATGAGCATGCAAGATGCTCTTGCAGTTGAACTAGATCTAGATGCGTTAAAGAGCACATCGTTCTTTGGTGTGTACGATGGCCATGGAGGAGCTGAAGTAGCAATGTACTGTGCAAAACGATTTCATGTTATGCTTCGCGAGGAAGAAAGCTTTCTCAACAATCTGTCCTATGCAATTACATCTGTGTGCTCCAGACTTGATGATGAATTGGAAGCACCAAATGTATGGAGGGCGTCACTTTATCCCCATCGTAGTAGTGAGTCGAGTAGCGAGTCTAGTGACTGTTTCCAGTTCCTCAGTACTGGCAGTTGTGCTAACGTGTGGCGTTCCTCAGAGGCAGTTTCTTACAAGCTGCCGTCATATGAAGGAAGCACAGCATGTGTGGTAATCATTAGAGGAAATCAGATCACTGTTGGAAATGTTGGCGATTCCCGTTGCGTGCTTTCAAAGAATGGTCAGGCAATTGATTTATCCACTGATCACAAACCAAACGTTCCACTTGAACGTCAGAGAATTCTAAGAGTAGGAGGACAAGTATGGAGGGAAAAATTTCCTGCAAAAGACTCAGGAGGGGAAATCAGGGAACAGTGGGGTCCATATTGTATTGAAGGAAAGCTATCCACGTCCAGAGCACTTGCTGGCATTTTCCTCACTACCATTTCAGGTGATTTTGCATATAAGAACATAGTTTATCGTCCTCAATATCAAATGGTGACACATTTTCCTGACATTCGTGTTGCGAAAATAACTGGTGATACTGAATTTCTTGTCATAGCAAGTGACGGCATCTGTTCCATTCAAATTCTCATAGTAGACTTAAACACATTTTTCCCTTTCAGGGATCACATGTCAAGTCAGGATGTGGTTGATTTCGTACATGAGAAATTAAACTCGCGAAGGCAAGAGCTCTGTCAAAGTTTGATAAATCAGGGAAAGAAAAGAGAATGCTTTACAGAGGATAGCCAATTAGCCACAAACAAGAACATAGCTCCAAATACAACAACACTGGGGGAGGAAACTCTACACACCACTTGCGAGAAGCTCGTCGAGAATTGCCTGGAATCGAGGAACAACGCGACGGCCATACTGGTCCAGTTCAAGCCAGGCGCCGACCAGCCGATCCCTGCCCTGCCCAACATCCAGGAGGGCTCCGACGAAGTCGCCGGCGGCGCCGACCAGCCGATCCCTGTCCTGCCCAACATCCAGCAGGTCTCCGACGAAGTCGCCGGCGGCACCGGCCAGCCGATCCCTGTTCTGCCCGACATCCAGGAGGGCTCCGACGAAGTCGCCGGCGGCGCCGCCGTGGCTGAGCAACATCAGCACAACCCAGAGGGCGGTGGCGAGCAGCAACTCGACCTCGATGACGCGCTTGACGGAGAAGCACTGGCGCTGCTGTTTGGCCAGCCTTAG
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| Protein seq | MVISVPLFSSVLLALVVAVPADFDVGGRLLGVGLCSVRGDPNEHYDPHGDLYLRPFLQLDSVHQFYSLVFARKASSAMGASTSTKRPLTSKVTNEGENDRVKYASSAMQGLRMSMQDALAVELDLDALKSTSFFGVYDGHGGAEVAMYCAKRFHVMLREEESFLNNLSYAITSVCSRLDDELEAPNVWRASLYPHRSSESSSESSDCFQFLSTGSCANVWRSSEAVSYKLPSYEGSTACVVIIRGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRILRVGGQVWREKFPAKDSGGEIREQWGPYCIEGKLSTSRALAGIFLTTISGDFAYKNIVYRPQYQMVTHFPDIRVAKITGDTEFLVIASDGICSIQILIVDLNTFFPFRDHMSSQDVVDFVHEKLNSRRQELCQSLINQGKKRECFTEDSQLATNKNIAPNTTTLGEETLHTTCEKLVENCLESRNNATAILVQFKPGADQPIPALPNIQEGSDEVAGGADQPIPVLPNIQQVSDEVAGGTGQPIPVLPDIQEGSDEVAGGAAVAEQHQHNPEGGGEQQLDLDDALDGEALALLFGQP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0607500 | RBH | 0.0 | 0.173614 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39480 | RBH | 0.0 | 0.116770 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0500900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024320 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0024460 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0024460 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0024100 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023980 | SBH | 0.0 | 0.000000 | 5.154609 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0389400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0023860 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0417200 | RBH | 0.0022325 | 0.0037525 | 0.028303 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024090 | SBH | 0.063482 | 0.093110 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0024080 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0024390 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024120 | SBH | 0.0 | 0.148118 | 0.118819 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0023840 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024270 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024100 | SBH | 0.118850 | 0.0 | 1.244394 |
