Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os01g0743732 | OGI:01040660 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:31082446-31083122 | ||||||||
| Gene Symbol | PTR, - | ||||||||||
| DNA seq | TTGGATTGAGGCGGCAGCTCGTCAGTGGGGGAAGCTCAGGCTGCCGAAGCAATGCCACCTAGTCCCGGGTTCTCCTTCGGCCAAATATGGCGAGGCGGCCGGCGGGTGGTGGAACGGAGGAGTCCTGGGCCAGTTTTCAGGGGTGGTGGTTCGTTGAAGTCGACCGACGGAGGGGTGTCGGTGCGGTGTGGTGGATGCCACGTGCTGCCATTTGTCCGTGTGGTGGTTCTGAGTTGGTGGACGGCGATCTGCAGTCAAGGTCGTAGGGTCCCAGGCGAAAGCTTAGTCCGGTGGTTCACCGGGCCGGCAGCGGCTACGTCTTCGGGCGTCGTAATCTCCTTGGAGCGTTGTCGAGGGTTACCCTCTCCCTTTCTTGGCGAGCTTCTCTAGGTAAAAACCACATCTTTTTAGATGGGCGATGGCGGCATCCTGGATGTCGTGACCACCATGGTGGCATCGTTTTTCGAAGCCTCGTCTCTGTGGTGTTGCCGTAGGCCTAGCGGCGTTCGGCCACGCTCAGCGAGGGTCGTTTGGTGCTAGGTTTCACCCTCAGCGGTTTGTGCTTGGGTGGTAGCGCGTGGTGTGTGGCAATGCACCTTGGTGCATTTTGATGTTTTTTCTCTTGTAACTTTTATTTCTTGTTAATATATTCGGTTGGCCTCCTTCGGCCTTCCCGG
More
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| CDS seq | TGGATTGAGGCGGCAGCTCGTCAGTGGGGGAAGCTCAGGCTGCCGAAGCAATGCCACCTAGTCCCGGGTTCTCCTTCGGCCAAATATGGCGAGGCGGCCGGCGGGTGGTGGAACGGAGGAGTCCTGGGCCAGTTTTCAGGGGTGGTGGTTCGTTGA |
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| Protein seq | WIEAAARQWGKLRLPKQCHLVPGSPSAKYGEAAGGWWNGGVLGQFSGVVVR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0743732 | Os01t0743732-00 | Chr01 | 31082446 | 31083122 | + | irgsp1_rep | ||
| CDS seq | TGGATTGAGGCGGCAGCTCGTCAGTGGGGGAAGCTCAGGCTGCCGAAGCAATGCCACCTAGTCCCGGGTTCTCCTTCGGCCAAATATGGCGAGGCGGCCGGCGGGTGGTGGAACGGAGGAGTCCTGGGCCAGTTTTCAGGGGTGGTGGTTCGTTGA |
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| Protein seq | WIEAAARQWGKLRLPKQCHLVPGSPSAKYGEAAGGWWNGGVLGQFSGVVVR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0743732 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g07923 | RBH | 0.760647 | 0.935082 | 0.308962 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0264700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024320 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023910 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011520 | RBH | 0.997189 | 0.000000 | 1.567714 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0011840 | RBH | 0.056285 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0040900 | SBH | 2.478813 | 1.457984 | 8.832377 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0325800 | RBH | 0 | 0 | 0.00657 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0040540 | SBH | 0.195627 | 0.119247 | 0.359309 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0040880 | SBH | 0.115829 | 0.066542 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040850 | SBH | 0.256550 | 2.458865 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0041070 | SBH | 2.037489 | 1.673819 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0041050 | SBH | 0.693163 | 0.375836 | 1.153008 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0040900 | SBH | 0.487130 | 2.958617 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G041330 | SBH | 0.174183 | 0.372829 | 0.174223 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017490 | RBH | 0.0 | 0.0 | 0.0 |
