Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os01g0718700 OGI:01090370 | 9/16 Nipponbare | IRGSP 1.0 | RAP-db Chr01:29944091-29948109
Gene Symbol -
DNA seq

GTGGTCCACTCCAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGCTGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCCGTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGGTATACGTGATGCTGATCCGTCACTGCATGTCCATTTTTTTTTCCTTTTTGCTGCTCTCTCTATTTTAGGTTGTAAGACGTTTTTACTTTAATCAAAGTTAAACTGCTTTAAGTTGATTAAATTTGTAGGAAAAAGTAGGAATATTTTTAACCCAAGACAAATTTATTATAAAAATATATTCAATTATTAATTTGATGAAACTAATTTAGTATTATATATATTACTATATTTGTCTATAAACTTAGTTAAACTAGTTTGATTTTAACCAAAGTTAAAACATTTTATAACCTGAAAACCTGAAATGGAGGGAGTATCTCCGTCAGAGAGTTCAATATTTATCGATGGACTTGCATTTTTAGGCACCTGGCACGACCATGCTTGGCGCTGGATGTCGCCTCAACGATTCCTTTACAGATGATCTACCGGATAGTGAGCGGCAAAAGACAAGCATTGTATGGGTTGCTCAATCTTCTCCGGCTCTGGCGATTACGGCGCGTCAGCAAGCTCTTTGCAAGGTAAATACTCCACATCCAATGGACGATCTCGGTCAAATAGATTGTGTGTGAGTTCATAACTTCATATACGCACGAATGATTAGTACGTGAGTGTGCAGTACTTTGTGTGAGTGTGTATTGCAGACTTGTAGAGTTGTGATCAAGTACGTATGGCTTTTTGTACGCAGCATGATTTAATTAGCTCCTTTGAAATATAGGATTCTCAAAACATAGGAATAGGAAAAAATATAAGATTTGAATATCATGCTCTTGTAAAACCTATAGGATTTCAAAACACAGGAATACCAGAACTAGTGCCTTCGAATAATTCACATGAAATAAAATATAGGAATTCTAGAGGAAATTTATTTGAGTGAGAGAGAGAGAGAGAGTAGAGAGAGAAAGGAAGAGAGTGCTTATTTTCCTTTGAAATGAGGCATAGGAAATTAAATCTATAGGATTTTCAAAGTTGTAGTATTCTTTCAATCGAAAGGACACTATAGGAATAGAATCCTAAGGATTTGGATCCTTTGCAAATCCAAAAAGAAACCCTCCAAATCCAAAGGAGGCCTTAGCACTACTGGCCTGACTTATAAGGTAATTTATTATCATAGTACTCCCACCATTTTCAAATATAAACATTTCTTGGATTTAAATTTTGTACATAATATATGCATTTATAAGCATTTGTATATACTAACTAAAGGTTGTGTTCGCCAATTCGAGTTGAGAACTCTTCCACCATTGGACACAAAACGAAACGACGGTTTAGTGCGTGATTAATTAAGTATGAGCAAAAAACTTGAAAATGAATTAATATGATTTTTTAAAACAATTTTTCTATAGAATTTTTTTTTAAAAAAATGCAGCGTTTAACATTTTGGGAAGCGTGCGCGTGAAAAACAAGGAAGATGAAGTTGGGACAATAGATTAAAGAATATAGCCTAATTGTGCCATCGTTCACGTCATTCAAATTCCTTTCTATTTTAATACCCCCTCCCACTCTCGCACTCCTATCAATCTCTCATTTAATGACGAGCAATATATATTTTCTTAATCTTAATATCTGCTAAATAACCTAGAAATTCTTATGTCTTTGGAAGAACGGAGAGTACCTTCTTTCATGATATCAACCTTGTAAGTGAGTGGACCAAGAGACTTTTCTTTCTTTGTCTTTATCTTCAGTGCGAGTGTGGGGGAAAAGAGCTCGTTTAAGTGGCTTGGTTTATAATTGCTGTAGCTCCGAGCCTCCGATTGATCAGTTTTTTTAAGCTAAAATTATTCAAAAATTTGTCAGTTCCCTAGCTCTTAACAAAAAATTGTCTTAAATAATTCAGAAAAATACAATAAATAAATTTCTAGAAAGCTTGGCCGCCTCAATTTCCATCCCTGTAGTACAGTAGTAGTGCAGATACACTACGTGACTTTGAGTTGGTAGCATGATTCACCAATGGGTGGCATGTAATGCTATATGAATAACTACAGTATGCATATGTGATCATCATTCATCAATGACCGATATGAAATTCTGAATCTTGCAGGTTGGAGAAGGACATTAGATTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTAAGGCCACGCCGTTCCACCCGGAGTACTATATTTCGGCAGAGTTCATACAAATAACTTGCTACGAAATCTTGTGTGCTCATGATTGCAATGCAGGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATCTACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAGCGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCGCCAACACGGGCGAGATGTTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATCACCAACCTCGTCGTCCACGAAACCACCAACACCTTCAAGATGGTAAATATTGGCAAAACCTGATCATGGTTTTCTTTTCTTTTGACACGGATTGGTGATCATGGCATTGTGTGCAGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAACGAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGCAGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGAGGGGCGGTCCAGAGCTGCTACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTAATTGAACACGCAGTAGCAAACGCCTTGGTCGGAATAGCTCTGCGTTTACCGGTTGGGTGACTGACTAAATAACGTGGTAAATTCAGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGCGGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGTAAGAACATGCCTCGTGTGACGTTTGTTCTCTTCGCTGTTCATGCTCTGACAACCTGCATTTCTCTTAATCTTTTATTTTGTATCAGGAGGTATTGACAACCCTTGAGGATGGTACAGAGAAGGTAAAGCACACGAGAACCCAGTTGACGCACTTAGTATATCAGTTATACCATTTCAAGCTTAGGGTGTGTTTAGATTCTAAAATTTTTTGGTAAAAAAAGTCACATCAAATGTTTGGACACATGCATGGAGCATTAAATGTGGGCGAAAAAAACCAATTGCACAGTTTACATGTAAATTGCGAGACGAATCTTTTGAGTCTAATTGCGCCATGATTTGACAATATGATGCTACAGTAAACATTTGATAATAACAGATTAATTAGACTTAATAAATTCATCTTGCAGTTTACAGACGGAATCTGTAATTTATTTTATTATTAGTCTACGTTTAATACTTCAAGTGTATCCGTATATTTAAAAAAAATTTGGCCAAAGAACGAAACACGGCCTTACTCTTCTCAGTATACTGAACTTTTTCCGGCATTTGCATACTGACCTGAAAAGGTTCTGATCAAAATTGTGACATTTCAGCAAGTGATGAGAATAGGGCCACGGGGAATGGCAGGGGAAATTGGGGTGATGTTCAACATCCCACAGCCGTTCACCATCCGGAGCAGAAAGCTCACGCAGCTCGTCCGTATAAGCCACAGCCATATGGTCTCGACCATCCGGCCTAACACTGCAGATGGGGTCGTTGTATTCTCCAATTTTGTTC

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CDS seq

GTGGTCCACTCCAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGCTGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCCGTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGGCACCTGGCACGACCATGCTTGGCGCTGGATGTCGCCTCAACGATTCCTTTACAGATGATCTACCGGATAGTGAGCGGCAAAAGACAAGCATTGTATGGGTTGCTCAATCTTCTCCGGCTCTGGCGATTACGGCGCGTCAGCAAGCTCTTTGCAAGGTTGGAGAAGGACATTAGATTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATCTACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAGCGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCGCCAACACGGGCGAGATGTTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATCACCAACCTCGTCGTCCACGAAACCACCAACACCTTCAAGATGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAACGAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGCAGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGAGGGGCGGTCCAGAGCTGCTACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGCGGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGTAAGAACATGCCTCGTGTGA

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Protein seq

VVHSRWWQKFLIVLVLYTAWASPFELAMEKSASAALAVTELVVDAFFAVDIAVSFFVAYRDASTGLLVTDRKKIATRHLARPCLALDVASTIPLQMIYRIVSGKRQALYGLLNLLRLWRLRRVSKLFARLEKDIRFSYLWTRLIKLLYVTLFAVHFASCIYLWMAFHHKAKELTWIGSQFHGFEDRSVWFCYTCAVYWSITTLATVGYGDLHAANTGEMLFSIAFMLFNMGLTSYIIGNITNLVVHETTNTFKMRDMVQRTSVFGRTNRLPVAMREQMMESLQLRFRAEEQLQQEMLSELPKAVRSGIAQHMFRGAVQSCYLFQGVSDKLVLPLVAEMKAESFPPKADIILENEASTDCYIIVSGEVVRTCLV

Function Potassium channel KAT6 [UniProtKB/Swiss-Prot:A2ZX97]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os01g0718700 Os01t0718700-00 Chr01 29944091 29948109 + irgsp1_rep
CDS seq

GTGGTCCACTCCAGGTGGTGGCAGAAGTTCCTGATCGTGCTGGTGCTGTACACGGCGTGGGCGTCGCCGTTCGAGCTGGCCATGGAGAAGTCGGCCTCGGCCGCGCTCGCCGTCACGGAGCTGGTGGTCGACGCCTTCTTCGCCGTCGACATTGCCGTCTCCTTCTTCGTGGCGTACCGCGACGCCTCCACCGGCCTCCTCGTAACCGACCGCAAGAAGATCGCCACCAGGCACCTGGCACGACCATGCTTGGCGCTGGATGTCGCCTCAACGATTCCTTTACAGATGATCTACCGGATAGTGAGCGGCAAAAGACAAGCATTGTATGGGTTGCTCAATCTTCTCCGGCTCTGGCGATTACGGCGCGTCAGCAAGCTCTTTGCAAGGTTGGAGAAGGACATTAGATTCAGTTACTTGTGGACCAGGCTTATCAAGCTCCTCTACGTGACGCTGTTCGCAGTGCACTTCGCCTCGTGCATCTACCTGTGGATGGCGTTCCACCACAAGGCGAAGGAGCTGACGTGGATCGGCAGCCAGTTCCACGGCTTCGAGGACCGCAGCGTGTGGTTCTGCTACACCTGCGCCGTGTACTGGTCCATCACCACGCTCGCCACCGTCGGCTACGGCGACCTGCACGCCGCCAACACGGGCGAGATGTTGTTCAGCATCGCCTTCATGCTCTTCAACATGGGCCTCACCTCCTACATCATCGGCAACATCACCAACCTCGTCGTCCACGAAACCACCAACACCTTCAAGATGAGGGACATGGTGCAGAGGACGTCGGTGTTCGGGAGAACGAACCGGCTGCCGGTGGCGATGAGGGAGCAGATGATGGAAAGCCTGCAGCTCAGGTTCAGGGCGGAGGAGCAGCTGCAGCAGGAGATGCTGTCCGAGCTGCCCAAGGCCGTGCGGTCAGGCATCGCGCAGCACATGTTCAGAGGGGCGGTCCAGAGCTGCTACCTGTTCCAGGGCGTCTCCGACAAGCTCGTCCTGCCGCTGGTCGCGGAGATGAAGGCAGAGTCATTTCCCCCCAAGGCGGATATCATCCTGGAGAACGAGGCTTCGACGGACTGCTACATCATCGTGTCTGGTGAAGTGGTAAGAACATGCCTCGTGTGA

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Protein seq

VVHSRWWQKFLIVLVLYTAWASPFELAMEKSASAALAVTELVVDAFFAVDIAVSFFVAYRDASTGLLVTDRKKIATRHLARPCLALDVASTIPLQMIYRIVSGKRQALYGLLNLLRLWRLRRVSKLFARLEKDIRFSYLWTRLIKLLYVTLFAVHFASCIYLWMAFHHKAKELTWIGSQFHGFEDRSVWFCYTCAVYWSITTLATVGYGDLHAANTGEMLFSIAFMLFNMGLTSYIIGNITNLVVHETTNTFKMRDMVQRTSVFGRTNRLPVAMREQMMESLQLRFRAEEQLQQEMLSELPKAVRSGIAQHMFRGAVQSCYLFQGVSDKLVLPLVAEMKAESFPPKADIILENEASTDCYIIVSGEVVRTCLV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0718700 RBH 0.061189 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g52070 RBH 0.030442 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0254200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0031670 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0031240 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0031690 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0030900 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0030580 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0496800 RBH 0.0232745 0.0167005 0.0446325
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0030310 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0489700 RBH 0.210983 0.0095515 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0030550 RBH 0.000000 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0030490 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0030790 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0030960 RBH 0.0 0.0 0.174725
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0030710 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G031180 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0030840 RBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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