Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
Os01g0589900		OGI:01071440 \| 16/16			Nipponbare \| IRGSP 1.0 \| RAP-db			Chr01:23005565-23008941		Homologues MicroCollinearity RGI-JBrowse RAP-DB Ricevarmap2
Gene Symbol		PPR
DNA seq		TTACTCGGAGAAAGGGAAATGAACTATTAGTACCCAACGGTTAAGGGATGATAGGTACCTGGTGAGAAGTGATATTCACCTCAAATATGAAAAGTCCAGGAAAACCATGTACCTAGTAATCAAGTACCCAAACCTCAAATTTGTGTAGTTAGGAAAAGCCTGTTCCTGGTACCAGCAGTATAAACAAGTTACCAGTAGTCCCCACAAGAACATTTCCCATCCTTGAAATGATGAAATCGGATTGAATCCCTTAAAATGATTTGCCGACCAACAATCTGAGAAATGTATCTGAAAGCTGTATGGCAATCTCCGCAAACCCGAAGGTTCTTCATGATCCTTATGGGGCCACCTGAGGAGGAACGAGTCAGAACAAAAGCAACCGCAAGCTTTTCACTGTGATATCTTAGCAGTTCTTCTTTGTTCTCTTCTTCAAGATCATGTAAAACATATTCTGTCAGTGGAACATAACCTGCATTCCTTATCTTCTGAATCAAAAAGTTGAGCTTCTCATAGATTTCTTTGGTGTTTGGATGTGACCTGTCACCAGCAATGAAGGTATGAACTCCATCAGTTAAGGTTACCCAACTGCGACCGGCCTCTTTTTTCACTGCTGCTCCCTTCATTGCAGCCCGGGCTTTGGCTGTGTCTTCCCACCTTCCTATTGCTGCATGAAACTTAGATGAAAGAACATAATTTACAGGATTTTGAGGTTCTAATTCCAAAAGCATCCTTGAAGCTTCTGTCCCCAGATCTATCTTAGCCCTGTGTTTTGATTGTTGACAAGCAACTAATACCGTCCTCCATATGAGAGTATTTGGTTTCATTGGCATTCTTTTCATGTACTCCTGTATCTTATCAAGCTCCCCAGCTCGACCAAGAAGGTCTATAACACAAGAATAATGCTCAATCCGAGGTAATATACCATAATCCTCCATCAATTCAAAGTAGTCAAGGCCTCTTTCAACTAAACCAGCGTGACTACAGGCAGACAAAACACTCACAAACGTGACATGGTCTGGACTTTCTCCGCTCTCTTGCATTTCCTCAAATATCTCCAAAGCTTTCCTTCCGAGACCATGTCTCGCATAACCAGAAATCATGGAGTTCCATGAGAACTCATTTTTCTGACTCATGGAATGAAATACCTTTGAAGCATAGTCTATCCTTCCACACTTGGAGTACATATCAACAAGAGCACTCTCGACCACAACATCTGATTCCAAGTGTGACCTTAAACCAAAAGCATGCATCTCCATTCCACGCTCCAATGCTGCCACAGAAGCACATGCATTCAGTACAATGGAGAAGGTGCAGTGATCCATCATTTGTTCACTATGCATCATAAGACAAACACAGTCCATAGCTTCCTGCAGATGTCCATTGTAGATGTACCCTGAAATCATTGAATTCCATGAGATAGCATCCCGTCTGCCAGACATTCTAGAAAACAGCCGCTCACAGGAATCCACATCTCCTGACTTTGCATAGCATGACATGAGTGCATTATCTACTGCATTATCTTCTGTAACTCCATGCTTCAGCATGACAGAATGAATCTGCTTTCCAAGTTCAAGAACAGATAATGGAGTCAAAGCAGCTAGAAAGTTAACAAACGTCACTTTGTTTGGGACCAAACCACTCTTCATCATATTGGAGAAAACTTGTACAGATTCAGTAATAGGTGCTTGTGAACTCGCCATAACACCCATGATAGAATTCCAAGAAACTACATCATGTGCAGACATAGAGTTGAAAATTTCCCAGCATTCTGACATCCGCCCACATTCTCCATACATTTTAACAAGAGCATTTGAAACAGAGGTATCTAAATATAGTCCCCATTTTACAGCATCACAGTGCAATTGTTGGCCTGCAGCTAAAAGTCCCAAACCAGCACAGGAACTTAAGCCACTAATTGCTGCAAAGTTTGATGGACCTATACTATTTTGTCTCATTAAACAGTAATTCATCATTGCTGCTTCACAGTATCCATTTTGATCAAGAGCAGTGATAATGGTATTCCATGAAATCCGATCCCTTGCTTCCATCAGCTGAAAAACTCTACATGCTTTATCAATGGCACCACACTTGGCATACATATTAACTAGACCATTACTAACTGCAATTTTCCTATAAATATGTCCAGCTCTGAGCACATGTGCATGGACTTCCCTACCTTTCCTCAACCCTTGTTCTGCTGTAGAAAACTCAGCTATTGCACTAAGCAACACAACATATGTATCCACGTTGACAGCAGCGGAATCCCTTGCTCCCATGAAAATCTCTGCTGCCGCTTCACCATGTTGCTGCTTGACCAAACCAGCTATCAGACCATTCAAAGTAACTGCATTTCTCTCTTTCAGACCGAGATAAATGTCCTTTGCTTCATCAAGCATGCCATGTCTCGCAAATGCACTTACTAAAGCACTGCCCACATACAGGTCACTTGAGCAGCCAGATTTGAGCACCCTCACAAACAATTGATCAAGCAGGCCCAAGCTGCATGAGGAAAGATATGTCGCGGTGATTAAGCTCCCAAAAGTATGCTCTGTCGGCCTCAACTCGATCCCCGAATCATCATACTGCATAGCCCTGAACAGAGTAAACGTACAAATTGCATCCCCTCTCTTTGCATACACAGACATCAAGGCGTTCCATGTGATCAAGTCCCTGACTGGAGTGGTATCAAACACACGCTGTGCCAGGATCGGCGGACCAACGGAGCAACTGCCATACATAGAGATCAGGGCATTGCACACCGTGGTGTTTGAAGTGAACTCTGTCTTAGAGACCAACCCATGGACCTGCACGGCGAAGCCCAGCCGGTCCGGCCCGGAATCCTGGCACGCCCGGAGCACGCTGCCAAAGGTGAACGACGTAGGCCTGCACCCCGGCCCCTCCCGCAGCATGGCGCGGAACAGCGGGAAGGCATCCTCGGGGAGCCCGGACAGCACGTGCCCGGAGATGAGGCAGGTCCAAGAAACGGCGTTCCGGCCCGGCATTCCGTCGAACACCCTGCGCGCGGCGTCCAGGCGCGCGCCCTTGGCGTACGAGTTGACGAGGTGGTTGGCGAGGAAGAGGTCATGGGTGAGGCCCCTCTTGACGACCTCGAGGTGGAGGCTCTCCGGCGAGGCGTCGCAGCCCGGGCGTCGGCCGCGGAGGAGGACGTCGGCGTGAGGATGCGGCCGCGAGAGGGGAGGCCGGTCCGGCGTGGGCGTGGGCGGGAGGCGGTGGGCGAGGAGGTCACGGAGCGGAACCGGAGGAGGGAGACGGCGAGGTGGCGGCGGTGGAGGAGAGGCCGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGCGGCGGAGTGTGAGGGGAGGTAATGGCGGGAGCTTGCGGTGCAT More
CDS seq		ATGCACCGCAAGCTCCCGCCATTACCTCCCCTCACACTCCGCCGCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCGGCCTCTCCTCCACCGCCGCCACCTCGCCGTCTCCCTCCTCCGGTTCCGCTCCGTGACCTCCTCGCCCACCGCCTCCCGCCCACGCCCACGCCGGACCGGCCTCCCCTCTCGCGGCCGCATCCTCACGCCGACGTCCTCCTCCGCGGCCGACGCCCGGGCTGCGACGCCTCGCCGGAGAGCCTCCACCTCGAGGTCGTCAAGAGGGGCCTCACCCATGACCTCTTCCTCGCCAACCACCTCGTCAACTCGTACGCCAAGGGCGCGCGCCTGGACGCCGCGCGCAGGGTGTTCGACGGAATGCCGGGCCGGAACGCCGTTTCTTGGACCTGCCTCATCTCCGGGCACGTGCTGTCCGGGCTCCCCGAGGATGCCTTCCCGCTGTTCCGCGCCATGCTGCGGGAGGGGCCGGGGTGCAGGCCTACGTCGTTCACCTTTGGCAGCGTGCTCCGGGCGTGCCAGGATTCCGGGCCGGACCGGCTGGGCTTCGCCGTGCAGGTCCATGGGTTGGTCTCTAAGACAGAGTTCACTTCAAACACCACGGTGTGCAATGCCCTGATCTCTATGTATGGCAGTTGCTCCGTTGGTCCGCCGATCCTGGCACAGCGTGTGTTTGATACCACTCCAGTCAGGGACTTGATCACATGGAACGCCTTGATGTCTGTGTATGCAAAGAGAGGGGATGCAATTTGTACGTTTACTCTGTTCAGGGCTATGCAGTATGATGATTCGGGGATCGAGTTGAGGCCGACAGAGCATACTTTTGGGAGCTTAATCACCGCGACATATCTTTCCTCATGCAGCTTGGGCCTGCTTGATCAATTGTTTGTGAGGGTGCTCAAATCTGGCTGCTCAAGTGACCTGTATGTGGGCAGTGCTTTAGTAAGTGCATTTGCGAGACATGGCATGCTTGATGAAGCAAAGGACATTTATCTCGGTCTGAAAGAGAGAAATGCAGTTACTTTGAATGGTCTGATAGCTGGTTTGGTCAAGCAGCAACATGGTGAAGCGGCAGCAGAGATTTTCATGGGAGCAAGGGATTCCGCTGCTGTCAACGTGGATACATATGTTGTGTTGCTTAGTGCAATAGCTGAGTTTTCTACAGCAGAACAAGGGTTGAGGAAAGGTAGGGAAGTCCATGCACATGTGCTCAGAGCTGGACATATTTATAGGAAAATTGCAGTTAGTAATGGTCTAGTTAATATGTATGCCAAGTGTGGTGCCATTGATAAAGCATGTAGAGTTTTTCAGCTGATGGAAGCAAGGGATCGGATTTCATGGAATACCATTATCACTGCTCTTGATCAAAATGGATACTGTGAAGCAGCAATGATGAATTACTGTTTAATGAGACAAAATAGTATAGGTCCATCAAACTTTGCAGCAATTAGTGGCTTAAGTTCCTGTGCTGGTTTGGGACTTTTAGCTGCAGGCCAACAATTGCACTGTGATGCTGTAAAATGGGGACTATATTTAGATACCTCTGTTTCAAATGCTCTTGTTAAAATGTATGGAGAATGTGGGCGGATGTCAGAATGCTGGGAAATTTTCAACTCTATGTCTGCACATGATGTAGTTTCTTGGAATTCTATCATGGGTGTTATGGCGAGTTCACAAGCACCTATTACTGAATCTGTACAAGTTTTCTCCAATATGATGAAGAGTGGTTTGGTCCCAAACAAAGTGACGTTTGTTAACTTTCTAGCTGCTTTGACTCCATTATCTGTTCTTGAACTTGGAAAGCAGATTCATTCTGTCATGCTGAAGCATGGAGTTACAGAAGATAATGCAGTAGATAATGCACTCATGTCATGCTATGCAAAGTCAGGAGATGTGGATTCCTGTGAGCGGCTGTTTTCTAGAATGTCTGGCAGACGGGATGCTATCTCATGGAATTCAATGATTTCAGGGTACATCTACAATGGACATCTGCAGGAAGCTATGGACTGTGTTTGTCTTATGATGCATAGTGAACAAATGATGGATCACTGCACCTTCTCCATTGTACTGAATGCATGTGCTTCTGTGGCAGCATTGGAGCGTGGAATGGAGATGCATGCTTTTGGTTTAAGGTCACACTTGGAATCAGATGTTGTGGTCGAGAGTGCTCTTGTTGATATGTACTCCAAGTGTGGAAGGATAGACTATGCTTCAAAGGTATTTCATTCCATGAGTCAGAAAAATGAGTTCTCATGGAACTCCATGATTTCTGGTTATGCGAGACATGGTCTCGGAAGGAAAGCTTTGGAGATATTTGAGGAAATGCAAGAGAGCGGAGAAAGTCCAGACCATGTCACGTTTGTGAGTGTTTTGTCTGCCTGTAGTCACGCTGGTTTAGTTGAAAGAGGCCTTGACTACTTTGAATTGATGGAGGATTATGGTATATTACCTCGGATTGAGCATTATTCTTGTGTTATAGACCTTCTTGGTCGAGCTGGGGAGCTTGATAAGATACAGGAGTACATGAAAAGAATGCCAATGAAACCAAATACTCTCATATGGAGGACGGTATTAGTTGCTTGTCAACAATCAAAACACAGGGCTAAGATAGATCTGGGGACAGAAGCTTCAAGGATGCTTTTGGAATTAGAACCTCAAAATCCTGTAAATTATGTTCTTTCATCTAAGTTTCATGCAGCAATAGGAAGGTGGGAAGACACAGCCAAAGCCCGGGCTGCAATGAAGGGAGCAGCAGTGAAAAAAGAGGCCGGTCGCAGTTGGGTAACCTTAACTGATGGAGTTCATACCTTCATTGCTGGTGACAGGTCACATCCAAACACCAAAGAAATCTATGAGAAGCTCAACTTTTTGATTCAGAAGATAAGGAATGCAGGTTATGTTCCACTGACAGAATATGTTTTACATGATCTTGAAGAAGAGAACAAAGAAGAACTGCTAAGATATCACAGTGAAAAGCTTGCGGTTGCTTTTGTTCTGACTCGTTCCTCCTCAGGTGGCCCCATAAGGATCATGAAGAACCTTCGGGTTTGCGGAGATTGCCATACAGCTTTCAGATACATTTCTCAGATTGTTGGTCGGCAAATCATTTTAAGGGATTCAATCCGATTTCATCATTTCAAGGATGGGAAATGTTCTTGTGGGGACTACTGGTACCTATCATCCCTTAACCGTTGGGTACTAATAGTTCATTTCCCTTTCTCCGAGTAA More
Protein seq		MHRKLPPLPPLTLRRSSSSSSSAAAAASPPPPPPRRLPPPVPLRDLLAHRLPPTPTPDRPPLSRPHPHADVLLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYWYLSSLNRWVLIVHFPFSE
Function		Putative pentatricopeptide repeat-containing protein At5g09950 [UniProtKB/Swiss-Prot:Q9FIB2]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os01g0589900	Os01t0589900-00	Chr01	23005565	23008941	-	irgsp1_rep
CDS seq	ATGCACCGCAAGCTCCCGCCATTACCTCCCCTCACACTCCGCCGCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCGGCCTCTCCTCCACCGCCGCCACCTCGCCGTCTCCCTCCTCCGGTTCCGCTCCGTGACCTCCTCGCCCACCGCCTCCCGCCCACGCCCACGCCGGACCGGCCTCCCCTCTCGCGGCCGCATCCTCACGCCGACGTCCTCCTCCGCGGCCGACGCCCGGGCTGCGACGCCTCGCCGGAGAGCCTCCACCTCGAGGTCGTCAAGAGGGGCCTCACCCATGACCTCTTCCTCGCCAACCACCTCGTCAACTCGTACGCCAAGGGCGCGCGCCTGGACGCCGCGCGCAGGGTGTTCGACGGAATGCCGGGCCGGAACGCCGTTTCTTGGACCTGCCTCATCTCCGGGCACGTGCTGTCCGGGCTCCCCGAGGATGCCTTCCCGCTGTTCCGCGCCATGCTGCGGGAGGGGCCGGGGTGCAGGCCTACGTCGTTCACCTTTGGCAGCGTGCTCCGGGCGTGCCAGGATTCCGGGCCGGACCGGCTGGGCTTCGCCGTGCAGGTCCATGGGTTGGTCTCTAAGACAGAGTTCACTTCAAACACCACGGTGTGCAATGCCCTGATCTCTATGTATGGCAGTTGCTCCGTTGGTCCGCCGATCCTGGCACAGCGTGTGTTTGATACCACTCCAGTCAGGGACTTGATCACATGGAACGCCTTGATGTCTGTGTATGCAAAGAGAGGGGATGCAATTTGTACGTTTACTCTGTTCAGGGCTATGCAGTATGATGATTCGGGGATCGAGTTGAGGCCGACAGAGCATACTTTTGGGAGCTTAATCACCGCGACATATCTTTCCTCATGCAGCTTGGGCCTGCTTGATCAATTGTTTGTGAGGGTGCTCAAATCTGGCTGCTCAAGTGACCTGTATGTGGGCAGTGCTTTAGTAAGTGCATTTGCGAGACATGGCATGCTTGATGAAGCAAAGGACATTTATCTCGGTCTGAAAGAGAGAAATGCAGTTACTTTGAATGGTCTGATAGCTGGTTTGGTCAAGCAGCAACATGGTGAAGCGGCAGCAGAGATTTTCATGGGAGCAAGGGATTCCGCTGCTGTCAACGTGGATACATATGTTGTGTTGCTTAGTGCAATAGCTGAGTTTTCTACAGCAGAACAAGGGTTGAGGAAAGGTAGGGAAGTCCATGCACATGTGCTCAGAGCTGGACATATTTATAGGAAAATTGCAGTTAGTAATGGTCTAGTTAATATGTATGCCAAGTGTGGTGCCATTGATAAAGCATGTAGAGTTTTTCAGCTGATGGAAGCAAGGGATCGGATTTCATGGAATACCATTATCACTGCTCTTGATCAAAATGGATACTGTGAAGCAGCAATGATGAATTACTGTTTAATGAGACAAAATAGTATAGGTCCATCAAACTTTGCAGCAATTAGTGGCTTAAGTTCCTGTGCTGGTTTGGGACTTTTAGCTGCAGGCCAACAATTGCACTGTGATGCTGTAAAATGGGGACTATATTTAGATACCTCTGTTTCAAATGCTCTTGTTAAAATGTATGGAGAATGTGGGCGGATGTCAGAATGCTGGGAAATTTTCAACTCTATGTCTGCACATGATGTAGTTTCTTGGAATTCTATCATGGGTGTTATGGCGAGTTCACAAGCACCTATTACTGAATCTGTACAAGTTTTCTCCAATATGATGAAGAGTGGTTTGGTCCCAAACAAAGTGACGTTTGTTAACTTTCTAGCTGCTTTGACTCCATTATCTGTTCTTGAACTTGGAAAGCAGATTCATTCTGTCATGCTGAAGCATGGAGTTACAGAAGATAATGCAGTAGATAATGCACTCATGTCATGCTATGCAAAGTCAGGAGATGTGGATTCCTGTGAGCGGCTGTTTTCTAGAATGTCTGGCAGACGGGATGCTATCTCATGGAATTCAATGATTTCAGGGTACATCTACAATGGACATCTGCAGGAAGCTATGGACTGTGTTTGTCTTATGATGCATAGTGAACAAATGATGGATCACTGCACCTTCTCCATTGTACTGAATGCATGTGCTTCTGTGGCAGCATTGGAGCGTGGAATGGAGATGCATGCTTTTGGTTTAAGGTCACACTTGGAATCAGATGTTGTGGTCGAGAGTGCTCTTGTTGATATGTACTCCAAGTGTGGAAGGATAGACTATGCTTCAAAGGTATTTCATTCCATGAGTCAGAAAAATGAGTTCTCATGGAACTCCATGATTTCTGGTTATGCGAGACATGGTCTCGGAAGGAAAGCTTTGGAGATATTTGAGGAAATGCAAGAGAGCGGAGAAAGTCCAGACCATGTCACGTTTGTGAGTGTTTTGTCTGCCTGTAGTCACGCTGGTTTAGTTGAAAGAGGCCTTGACTACTTTGAATTGATGGAGGATTATGGTATATTACCTCGGATTGAGCATTATTCTTGTGTTATAGACCTTCTTGGTCGAGCTGGGGAGCTTGATAAGATACAGGAGTACATGAAAAGAATGCCAATGAAACCAAATACTCTCATATGGAGGACGGTATTAGTTGCTTGTCAACAATCAAAACACAGGGCTAAGATAGATCTGGGGACAGAAGCTTCAAGGATGCTTTTGGAATTAGAACCTCAAAATCCTGTAAATTATGTTCTTTCATCTAAGTTTCATGCAGCAATAGGAAGGTGGGAAGACACAGCCAAAGCCCGGGCTGCAATGAAGGGAGCAGCAGTGAAAAAAGAGGCCGGTCGCAGTTGGGTAACCTTAACTGATGGAGTTCATACCTTCATTGCTGGTGACAGGTCACATCCAAACACCAAAGAAATCTATGAGAAGCTCAACTTTTTGATTCAGAAGATAAGGAATGCAGGTTATGTTCCACTGACAGAATATGTTTTACATGATCTTGAAGAAGAGAACAAAGAAGAACTGCTAAGATATCACAGTGAAAAGCTTGCGGTTGCTTTTGTTCTGACTCGTTCCTCCTCAGGTGGCCCCATAAGGATCATGAAGAACCTTCGGGTTTGCGGAGATTGCCATACAGCTTTCAGATACATTTCTCAGATTGTTGGTCGGCAAATCATTTTAAGGGATTCAATCCGATTTCATCATTTCAAGGATGGGAAATGTTCTTGTGGGGACTACTGGTACCTATCATCCCTTAACCGTTGGGTACTAATAGTTCATTTCCCTTTCTCCGAGTAA More
Protein seq	MHRKLPPLPPLTLRRSSSSSSSAAAAASPPPPPPRRLPPPVPLRDLLAHRLPPTPTPDRPPLSRPHPHADVLLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYWYLSSLNRWVLIVHFPFSE More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	None	None	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0589900	RBH	0.872093	0.722683	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g40720	RBH	0.577727	0.492914	0.0
Nipponbare \| IRGSP 1.0 \| RAP-db	Os05g0534900	SBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0023550	RBH	0.0	0.943593	0.455344
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0023120	RBH	0.0	1.147287	0.114722
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0023450	RBH	0.191323	0.0	0.784586
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0022860	RBH	0.000000	0.021536	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0022550	RBH	1.524990	3.908299	0.616416
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0384000	RBH	2.04928	1.7185095	1.0415875
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0022490	RBH	0.105741	0.058560	0.089992
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0373200	RBH	2.025719	1.8292855	3.3753005
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0022480	RBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0022430	RBH	0.0	2.204708	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0022710	RBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0022730	RBH	0.067296	0.260898	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0022540	RBH	0.0	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G022870	RBH	0.171534	0.649453	0.163013
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0022540	RBH	0.158528	0.0	0.429855

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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