Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os01g0511800 | OGI:01058130 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:18026557-18030344 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CACATCAAATAAAGAATAAATAAACTTATATTCAAGCCATGTTTCATTGAAATACAAAAGCATAAGATAAAATAATACAAGGTCCTCCTTGTATGAATTAAGGATTAGACAGAAAAAAAAACCTCAGGGTTCAAGAGAATGTGGAAAACGGAGATAAAAGACACTTTGATCATCCGATGCTACTGGTCATAAAAAAATTGTGCTTACATTTGTATAAGAAATGGTCACTTATATGTGAATGTGTGATCCTCAACTTCTCCTAGAAGTTTTAAATAAAGTAGAGTTGCAGATATATATTATGATCCTTTGAACCTGACAAAACAGCATAGCATGGTCAATCAGCTTTGTTAGAAAATACAAAAACCCTGCAATATTTCTAGAAAAAGAACAGCTAACTTGTAACTCCAAGTAGCATATATTGCAACCTGCTCTTAGAATAGCTTTCTTTTTTTAAAAAAAAACTTACACTTAATGATACTTAGCCAATGTAATCCCAAGCTTACTGGCAGTGAATCGCTAGGCCAATATCTGATTGAACATAGAGAGATTTTAACGAACAATTCCGCAGAATATGAAGAATGAGAAGAATTGAAGATACAACTAACTCGTTTGTTTTGAAACAAACCATTCCCTCAAGCTAGCTAGCAACATTGAAAAACTAACACAACTTGCACTGTACTTATGAAGTGCATGCATCGTATCGATCACCAGATTATGCTAAAGAGATCCATCAAGCAAGGATGCATTTAGAAAACATTCAGATTAAAATCAGTTATGATCTGTAGTTCAACTGCTAAAACTTTTATTGAGGTCAACAGGTTACAGGTAGCGAATAACTCAGAACCAATCCAATGGGCCAATCCGTGATAAAAGAAAAGGTGGCAACAGTAGATCTTTATATTAGATGAGGTCTTATACTTGTGTGATACTGGAATATCAATTCAAGCTATTTTCTGCTAGCTATGTCATAATAAGGTGTGAGATTTGGGTACCTGCTACACTTTTTTTTAATAGTAGCCCAAAATCTTTATATCATCAGCAGATTGATCCTTGTACACATAAGGACCACTTAGGTACCACGAACCTGCAGCACAATGATAATATTCTTCAACACATCATTGATTTGCTTGATCAGGGATGTAAGAAAAATTCAAGGGGGACAACATAAGAGCAATCAGACAACAATATCAAGAAAAACAGTAGTTACCTTTTTGTATTTGTGAAATTTAAAGAACTACTACTATGCCGGACCATGCCAATCAAGGTTGAAAATAACAAGCCAATATGAAGGCAAAATTAATTAGATTCATGGAATGCAATTCGGTTGCACGCTCCTAGCACGGAGGTCGGGAACACAACACACCTTGTGCTTCAATAAAATGTCTCTAAAGAAAGATGCATCATTTCTTTTAATATATCTGTCTTTGGATCCACTCAAACCAAATTTTAAGAGATTGGTCCTTGGGCAGGTTCATTGTGAGGCAATCTAAGCCTTGGTAATGAAAAGATAAACACTCAAATTCCTGGACCAGAGAAATGGATCAATTTTCATAGTCAGAATTAGAATTGTTCCATGCCAAGTTTAGTTCATCTAATAGGTACTACTCAAATATAGGTCTTTGCCCTTGCTTGACCAGTGAACCGTTATCTTATAAAATAGTAAAAACTAAAAGTAAAGAAATAATTGCACGTATGGATATTACCTTCATGTTGTGCTTACGGAGTATATGAAATTAGATACATCAACTAGAGACCAATCAATGCTAAATAAAAGAACAAAATCTCCTCGACCAACATCCTGGATAGATATGGAGACATGTTGATCATCTATATTAAGGAGTTCATGTGGTCCTGCTCCTCTGCCTCTGTCTGAAGTTTGGGTAGCCTGAAACAATGGAATTGTTAAAACTAAACACTAGACAGTCTAATTAGTTGACTAACAGTTGTCGTACTGATTAGTTCGCCAATTCCCCTTGACCTTTGTCAAATGCACCTTCATATGCACAACAATTTACTCACATAGAAATTCCATTGAATATCTTGCAAATGAATGAAATTGTGAATCTAACACTACAGCTAATGATTTCTAGAGGAAAAGCATACTCACTGAATAAACGAACCCTTTTTTTTCTTGAGAGCAAGCATAATGTACCTTGTTTGTGTGGATATGTTGTTTAACCAAAAGGAGCTCCAAGACACCATTGTCTAGAGCCTCCATATTATCTAGAGCACTATAAACAAAATATGCTAGCTGTGTACTGTTTAGCAGTCCCAAGTCACATAAACCAAGCTACTAGGAATAAATCATAATTGAGCTTAATCATTGATTTTCTACTTTTGTGGAGTATGGAACAAAACTACAAATAAATAACAAAACCATTCCTTGATATGTCTATATGTACATATCACGAAACATAATGTATATACATGAATATTCACCAAATGAAGTCATATCCACGCTGTTTTGTGTAGTGAGCTTAATCAAGTAGCTCTTGGGGATTAGCACCGGATCAATAGGGCATGTTGAACTGTTAGTCGATACAGTAGTTAGATGCACACAAACCACCACATGACCACTCACGGGTGAAACATAATAAAGAACCTTAGGATTATACCTGACCGTTTAGGTTCCTATTCTTCTTGACCTGGCGAAGAAATATTTCAGCTCCTGCACTTTTCTATTGCAGCATGTACGGAGATAAATCAAATTGATTGCTGCATATAATTTATTATAGAATTTGTCATGTTAATTCAGAGTGCAAGGGAAACAATACCTTAGAGGTAAGCACTGTCACCGTCTGAAGTAGCTAGAAGGCTCTCAGAATACATGATCGTGTTGTAGTGTCTAGAGATTATTTCGGGTAAACACTCTACATAATCTTTCTACAAGCCTTTGCATTAGCATTGGACATGTATCTTTTTCTAATTACTCTGATTTCTAATCCTTTAACCAAAGTCTCCCATGTGTATAGCATAGTTCAGTTAATCAGTTGGTGCAAATAACATGGAGCCATCACAATTTCGTCATCAGTTGGTTGCAAACTGTAATGCCTGAAAAAAGATTGACCAAGAACATTAACAACAATATTTAGCTTCTGACAAAGTTTTCTCTCCACACAGCAAGTGTAACAACAGCAGGAAAAAAGTAATTTTCTTAATAAAACTCGCAGGAATATCAAGCGACGGAGGGTGCGCAGGTGTTGGCGGACAGGACGACACAACCGGCGTTGGGGCAGTGGAGGAGGATCTGACGACGACGGCTGCATGGCAGCGACGGTGGCCGTCGCGAGATTGATGGCAGCGCGGAGAGAGGATATCGGCGAGGCGAAGGACGACGCGGTGGGTGATGGGGAGGCGGACGCGGCGGCGGTGGACAGGACGGCGCGACATGTGTTAGGGATCGAGAGCTGGACCACCGTTGCCGAGTTCACCCCGTCGGCGGATCTGACGACGACTGTTGAGCCGGCGAAGGGGACTCGGGGATGGTGACCGCCGCGGGATTGATGGTGGCGCTGAGAGAGGAGATCGGCGAGGCAATGGCGGGCAATGGCGGGTGATGGGGAGGAGGAGGACGCGACGGCGGTGGGTGAGGAGGAGGACAACGCGGAGGCGGTGTGGAGGAGGCAATGCAGCAGCGGTGAGTGTGAAGGAGGACGACGCGGAGGCGATGGGGAGGAGGCGATGCAGTGGCGGTGGGTGGGGAGGAGGAGGACACGGCGACGGTGGCAGGTCAGGGAGATTCGGCGGCGCGGGGGTGTGGCAGGAAGGGGTTCGAGAGCGGTAGTAGC
More
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| CDS seq | TGTTTAGTTTTAACAATTCCATTGTTTCAGGCTACCCAAACTTCAGACAGAGGCAGAGGAGCAGGACCACATGAACTCCTTAATATAGATGATCAACATGTCTCCATATCTATCCAGGATGTTGGTCGAGGAGATTTTGTTCTTTTATTTAGCATTGATTGGTCTCTAGTTGATGTATCTAATTTCATATACTCCGTAAGCACAACATGA |
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| Protein seq | CLVLTIPLFQATQTSDRGRGAGPHELLNIDDQHVSISIQDVGRGDFVLLFSIDWSLVDVSNFIYSVSTT |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0511800 | Os01t0511800-01 | Chr01 | 18026557 | 18030344 | - | irgsp1_rep | ||
| CDS seq | TGTTTAGTTTTAACAATTCCATTGTTTCAGGCTACCCAAACTTCAGACAGAGGCAGAGGAGCAGGACCACATGAACTCCTTAATATAGATGATCAACATGTCTCCATATCTATCCAGGATGTTGGTCGAGGAGATTTTGTTCTTTTATTTAGCATTGATTGGTCTCTAGTTGATGTATCTAATTTCATATACTCCGTAAGCACAACATGA
More
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| Protein seq | CLVLTIPLFQATQTSDRGRGAGPHELLNIDDQHVSISIQDVGRGDFVLLFSIDWSLVDVSNFIYSVSTT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0511800 | RBH | 0.0 | 0.162899 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0019180 | RBH | 0.0 | 0.792940 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0018800 | RBH | 0.0 | 0.0 | 0.654129 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0019080 | RBH | 0.0 | 1.170622 | 2.766334 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0018480 | RBH | 0.0 | 0.107886 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0018410 | RBH | 0.000000 | 3.599773 | 3.592408 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0018420 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0008090 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0008070 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0008120 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G018780 | RBH | 0.0 | 0.816989 | 1.231907 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0018480 | RBH | 0.280121 | 0.000000 | 1.377304 |
