Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
Os01g0263400		OGI:01027800 \| 16/16			Nipponbare \| IRGSP 1.0 \| RAP-db			Chr01:8921590-8924862		Homologues MicroCollinearity RGI-JBrowse RAP-DB Ricevarmap2
Gene Symbol		-
DNA seq		TCAACTAGAATTCTGAATCATTGCTTCAATTGCTTTGTTGGCCTTAATCAGTTCCCCTTTTAAGCAAAGTGAAGCGATTGCTGGATAATATGTGTCAAAGTCATCATGGAAAGAATTCCGTAGCAAATTATCATAGTAAATATCAGTATCATCACTTGGTGTGCATAAATTCTCAGCTCCATCTATTGTGGGTTGAACTGTGCCTTCAGAAATTCCATGAAGACAGTTGCTAGAAACACCATAAGTAGTTGAACATAAAACTTGTCCAGGATTATCCATATTACGATCATAAGCCACAGGTGTCTCTACGTTCTTCAGGTGACTAAGCGTGCTACAATTATTAGAATCTGAAGAGGATACAGACATGAGCGCCACTTCATTTAGGATAGTCACGACCTCATCAATCCTCCCTTGCTCACAGGCAGAAAATAGAAGGCCAACAAAAGATTCTGCTTGGATCTTATCCCCAACACTGTTTATGAACTCTGCAACTTCTTTGCACTGAAACATCTCTCTCAAGATGCTCCTAGATTCTTCCATTCTTCCTTTTGCATAGAGTCCTTTGACCAGGCTCATGAAGCCAACAAAATCTGGAACCATCTCCTTATGATAGTATTCACTAAAGAAGCCTAATGCTGATTCAATGTCACCTTTTAGGCAGTGTCCATTAATTATTGCACCAATTGTAATAGCGTCTGGGAATAGAAATATTTCCTCAAAATGTGATATAAGCTCCAGTGCTTTCTCAGTTAACCCGTAGTTACAATAACCACTTATTAGCAAGTTGTAAACACGTGTAGTGGGTTTGATACCCTTGGTGGACATTTTCTGAAACAACTCATGAGCGTCATCCAAAAAACCTTCTCTGCACAAAGCAGCTATAAGTATAGAGTAAGTTACCAGTGTCGGAAGCACTTCACTGCTTTCTAGGTAGTCAAATAGCCGGAATGCTTCAGTAAGGCATCCCTGCTGGCACAAACCATTCAGAACAGAGTTATGGATGACAATGTTTGGCTGAATCCCTTCTTCTTTCATGCTTTCGCATAGGTCTAATGCCTTCTCAAGATAACCACTTTTACAAAGGCCTTCCACTAATATGGAGTACATGGCAAGATCCACTGAATAACCATTTTGTTCAGCTTCCTTCAAAAAGTTGCATGCATCCAGAATTCTACCTTCCCTCTTTAGTGTGTATACAGCTTCTCTTAGAACACTGACAGGAACACGGCCATTGTTCATGTAATTGGAAAACCCAATAGCTTCACCAACACTGTTCTTGCTGAGGTGGCAAGATAGCATATTAATCATTCTAGGTTCATCCAGGCCATGAATTTTAATGAACTGACTTAATAATGGCTGGATGGTCTGTTCATGACCATTTCGGAGCAAGCATTTGAGTAGCCTGTAGCATGTTTTGCTAGTTACAGTAAATGATTTCATTCTTAGAAGCTTGTAAACATCCAATGCTCCTTGGTAGCAATCTCTTGTGCTTAAGAAAGCGGAAGCATAATTACATAGAGATGAAAATAAGTCAATTTCAGATCCATCCACCTTAAGAATGAAATTCAGCACGCCATGTTCACCGCCTTCTTTAAAGTGTGTATGGATCAACTTCTTGTAAGTACAGGAATCAGGCCTTAAATTTCTTTGGATAAGATCATTAAAAATCTGCTCAGCCATGTTTACCTTTCCTCCATTACACAATGCTATAATCAGGCAATTGTGTACTATTGTAGAGGAGAACAAGATGTCTTCTTTGTAATCATCAAACAACTGCAGTGCCCTGTCAGTTTCTCCAAGTTTACACATCATGTCAATAACTGTATGATATGTGACAATATTAGGCCTTAATCTCATCTCGGGCATTCTAAGAAACAAGCTGCAGGCATCATCCACCTTCTTAATCATAAATAATGCTTTGATAAGTACATTGCATGTGACAACATCAATTGTAACACCGCTGCTCTCAAGCCTACCTTTTATTGCCATTACACCAGTTGCATCTTCTACCTTAATGTGACCATGTAACAGCGTGCTATATGTGAAGTTATCAGCAGCAATACCTTCATATATTTCAACAGCCTTCTTGGTGTGACCAACCTTACATAGACCATTTATTACTGAATTGTATGTTACGATTCCAATCTTTATCCCCTTTTTATCCATCTCTTCAAGCAAAGAGAAAGCCCTATCCAAATATCCCTTTTTGCACAAATTGTCAATCAAAATTGAGTAAACATATTCATCCACCACCACTCCTGTCTGTTCCAGTTTCCTCACTATAGAAAAAGCATCATCCAACCTGTTTCTCTTGCAGAAACCACCAATCAATGATGTATAAGTGATCAAATTCGGCTTAGCATCCCTTCGGTTCATCTCATCCAAGAATCCCATCACTTTTTCCACACTACGTTCTCTGCAAAGTCCATCAATAACAGTAGTATAACTAACTACATCAGCTGCAATGCCCTTATCTAACATCACCCGATGCTCACGGAGCCCTTTCATCAATAACCCGCTACTCATGTATCCATGAACCAAGCTGCCATATAAAACAGCATCACCAACCAACCCCTTCCCTTCCATCTCCCTTACCAATTGTGCTGCCTCAGTAGTTCTCCCTACACGGCCAAGCACATCGACAAAAGCGGTTAATGTGATCAAGCCTGGCTCAAATCCATTGAACTCTCTCCTCACCCTCCTATAGAATTCCAGCCCATCCCCAGCCTTCCCGACCTTGGAGAAGCCTGAAATGATCACGCTGCAAACACGATCATCCACCTGACACCCCGCTGCAGCCATTACGTCGAACACCTTGAGCGCGGTCTCCATGTCACCGCGGGCACACAGCATCGTCAGGGCCACACGATACGTGGACGGAGAAAACACGAGCCCGCACTCCTCTACGCCGGCGGAGAGCACCTCCAGCGCGCGGCGAGCATCGCCGCGCACCGCGCAGGCCCGGCGGAGCAGCGCGTCCCAGAGGCGGCGCGCGGAGGAGGTTGCCGGGCCGGCGAGCGCGAGGCGCGCTGCCGCGTCGCGCGGACGGGAAGAATCTAGAAGCGCCGAGGCGACCAGGAGGTGGGTGCGCGCGGTGGGGCGCACGGAGTTGGCGACCGCCTGCGAGGCGAGCGCGCCGACGAGGCGGTGCCTCCGCCGGCGGAGGAGCGCCGCCAGTAGGATGTCCACGCGGCGCGGCGTGACGGCCCTTCCGAGCTTGACCAGCGACGGGAGCGGCGGTGGTGGTCGGGGCTCGCCGCCGGCGAGCGGCAT More
CDS seq		ATGCCGCTCGCCGGCGGCGAGCCCCGACCACCACCGCCGCTCCCGTCGCTGGTCAAGCTCGGAAGGGCCGTCACGCCGCGCCGCGTGGACATCCTACTGGCGGCGCTCCTCCGCCGGCGGAGGCACCGCCTCGTCGGCGCGCTCGCCTCGCAGGCGGTCGCCAACTCCGTGCGCCCCACCGCGCGCACCCACCTCCTGGTCGCCTCGGCGCTTCTAGATTCTTCCCGTCCGCGCGACGCGGCAGCGCGCCTCGCGCTCGCCGGCCCGGCAACCTCCTCCGCGCGCCGCCTCTGGGACGCGCTGCTCCGCCGGGCCTGCGCGGTGCGCGGCGATGCTCGCCGCGCGCTGGAGGTGCTCTCCGCCGGCGTAGAGGAGTGCGGGCTCGTGTTTTCTCCGTCCACGTATCGTGTGGCCCTGACGATGCTGTGTGCCCGCGGTGACATGGAGACCGCGCTCAAGGTGTTCGACGTAATGGCTGCAGCGGGGTGTCAGGTGGATGATCGTGTTTGCAGCGTGATCATTTCAGGCTTCTCCAAGGTCGGGAAGGCTGGGGATGGGCTGGAATTCTATAGGAGGGTGAGGAGAGAGTTCAATGGATTTGAGCCAGGCTTGATCACATTAACCGCTTTTGTCGATGTGCTTGGCCGTGTAGGGAGAACTACTGAGGCAGCACAATTGGTAAGGGAGATGGAAGGGAAGGGGTTGGTTGGTGATGCTGTTTTATATGGCAGCTTGGTTCATGGATACATGAGTAGCGGGTTATTGATGAAAGGGCTCCGTGAGCATCGGGTGATGTTAGATAAGGGCATTGCAGCTGATGTAGTTAGTTATACTACTGTTATTGATGGACTTTGCAGAGAACGTAGTGTGGAAAAAGTGATGGGATTCTTGGATGAGATGAACCGAAGGGATGCTAAGCCGAATTTGATCACTTATACATCATTGATTGGTGGTTTCTGCAAGAGAAACAGGTTGGATGATGCTTTTTCTATAGTGAGGAAACTGGAACAGACAGGAGTGGTGGTGGATGAATATGTTTACTCAATTTTGATTGACAATTTGTGCAAAAAGGGATATTTGGATAGGGCTTTCTCTTTGCTTGAAGAGATGGATAAAAAGGGGATAAAGATTGGAATCGTAACATACAATTCAGTAATAAATGGTCTATGTAAGGTTGGTCACACCAAGAAGGCTGTTGAAATATATGAAGGTATTGCTGCTGATAACTTCACATATAGCACGCTGTTACATGGTCACATTAAGGTAGAAGATGCAACTGGTGTAATGGCAATAAAAGGTAGGCTTGAGAGCAGCGGTGTTACAATTGATGTTGTCACATGCAATGTACTTATCAAAGCATTATTTATGATTAAGAAGGTGGATGATGCCTGCAGCTTGTTTCTTAGAATGCCCGAGATGAGATTAAGGCCTAATATTGTCACATATCATACAGTTATTGACATGATGTGTAAACTTGGAGAAACTGACAGGGCACTGCAGTTGTTTGATGATTACAAAGAAGACATCTTGTTCTCCTCTACAATAGTACACAATTGCCTGATTATAGCATTGTGTAATGGAGGAAAGGTAAACATGGCTGAGCAGATTTTTAATGATCTTATCCAAAGAAATTTAAGGCCTGATTCCTGTACTTACAAGAAGTTGATCCATACACACTTTAAAGAAGGCGGTGAACATGGCGTGCTGAATTTCATTCTTAAGGTGGATGGATCTGAAATTGACTTATTTTCATCTCTATGTAATTATGCTTCCGCTTTCTTAAGCACAAGAGATTGCTACCAAGGAGCATTGGATGTTTACAAGCTTCTAAGAATGAAATCATTTACTGTAACTAGCAAAACATGCTACAGGCTACTCAAATGCTTGCTCCGAAATGGTCATGAACAGACCATCCAGCCATTATTAAGTCAGTTCATTAAAATTCATGGCCTGGATGAACCTAGAATGATTAATATGCTATCTTGCCACCTCAGCAAGAACAGTGTTGGTGAAGCTATTGGGTTTTCCAATTACATGAACAATGGCCGTGTTCCTGTCAGTGTTCTAAGAGAAGCTGTATACACACTAAAGAGGGAAGGTAGAATTCTGGATGCATGCAACTTTTTGAAGGAAGCTGAACAAAATGGTTATTCAGTGGATCTTGCCATGTACTCCATATTAGTGGAAGGCCTTTGTAAAAGTGGTTATCTTGAGAAGGCATTAGACCTATGCGAAAGCATGAAAGAAGAAGGGATTCAGCCAAACATTGTCATCCATAACTCTGTTCTGAATGGTTTGTGCCAGCAGGGATGCCTTACTGAAGCATTCCGGCTATTTGACTACCTAGAAAGCAGTGAAGTGCTTCCGACACTGGTAACTTACTCTATACTTATAGCTGCTTTGTGCAGAGAAGGTTTTTTGGATGACGCTCATGAGTTGTTTCAGAAAATGTCCACCAAGGGTATCAAACCCACTACACGTGTTTACAACTTGCTAATAAGTGGTTATTGTAACTACGGGTTAACTGAGAAAGCACTGGAGCTTATATCACATTTTGAGGAAATATTTCTATTCCCAGACGCTATTACAATTGGTGCAATAATTAATGGACACTGCCTAAAAGGTGACATTGAATCAGCATTAGGCTTCTTTAGTGAATACTATCATAAGGAGATGGTTCCAGATTTTGTTGGCTTCATGAGCCTGGTCAAAGGACTCTATGCAAAAGGAAGAATGGAAGAATCTAGGAGCATCTTGAGAGAGATGTTTCAGTGCAAAGAAGTTGCAGAGTTCATAAACAGTGTTGGGGATAAGATCCAAGCAGAATCTTTTGTTGGCCTTCTATTTTCTGCCTGTGAGCAAGGGAGGATTGATGAGGTCGTGACTATCCTAAATGAAGTGGCGCTCATGTCTGTATCCTCTTCAGATTCTAATAATTGTAGCACGCTTAGTCACCTGAAGAACGTAGAGACACCTGTGGCTTATGATCGTAATATGGATAATCCTGGACAAGTTTTATGTTCAACTACTTATGGTGTTTCTAGCAACTGTCTTCATGGAATTTCTGAAGGCACAGTTCAACCCACAATAGATGGAGCTGAGAATTTATGCACACCAAGTGATGATACTGATATTTACTATGATAATTTGCTACGGAATTCTTTCCATGATGACTTTGACACATATTATCCAGCAATCGCTTCACTTTGCTTAAAAGGGGAACTGATTAAGGCCAACAAAGCAATTGAAGCAATGATTCAGAATTCTAGTTGA More
Protein seq		MPLAGGEPRPPPPLPSLVKLGRAVTPRRVDILLAALLRRRRHRLVGALASQAVANSVRPTARTHLLVASALLDSSRPRDAAARLALAGPATSSARRLWDALLRRACAVRGDARRALEVLSAGVEECGLVFSPSTYRVALTMLCARGDMETALKVFDVMAAAGCQVDDRVCSVIISGFSKVGKAGDGLEFYRRVRREFNGFEPGLITLTAFVDVLGRVGRTTEAAQLVREMEGKGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTVIDGLCRERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDAFSIVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRLESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPDSCTYKKLIHTHFKEGGEHGVLNFILKVDGSEIDLFSSLCNYASAFLSTRDCYQGALDVYKLLRMKSFTVTSKTCYRLLKCLLRNGHEQTIQPLLSQFIKIHGLDEPRMINMLSCHLSKNSVGEAIGFSNYMNNGRVPVSVLREAVYTLKREGRILDACNFLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGCLTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEYYHKEMVPDFVGFMSLVKGLYAKGRMEESRSILREMFQCKEVAEFINSVGDKIQAESFVGLLFSACEQGRIDEVVTILNEVALMSVSSSDSNNCSTLSHLKNVETPVAYDRNMDNPGQVLCSTTYGVSSNCLHGISEGTVQPTIDGAENLCTPSDDTDIYYDNLLRNSFHDDFDTYYPAIASLCLKGELIKANKAIEAMIQNSS
Function		Pentatricopeptide repeat-containing protein At5g57250, mitochondrial [UniProtKB/Swiss-Prot:Q9LVD3]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os01g0263400	Os01t0263400-00	Chr01	8921590	8924862	-	irgsp1_rep
CDS seq	ATGCCGCTCGCCGGCGGCGAGCCCCGACCACCACCGCCGCTCCCGTCGCTGGTCAAGCTCGGAAGGGCCGTCACGCCGCGCCGCGTGGACATCCTACTGGCGGCGCTCCTCCGCCGGCGGAGGCACCGCCTCGTCGGCGCGCTCGCCTCGCAGGCGGTCGCCAACTCCGTGCGCCCCACCGCGCGCACCCACCTCCTGGTCGCCTCGGCGCTTCTAGATTCTTCCCGTCCGCGCGACGCGGCAGCGCGCCTCGCGCTCGCCGGCCCGGCAACCTCCTCCGCGCGCCGCCTCTGGGACGCGCTGCTCCGCCGGGCCTGCGCGGTGCGCGGCGATGCTCGCCGCGCGCTGGAGGTGCTCTCCGCCGGCGTAGAGGAGTGCGGGCTCGTGTTTTCTCCGTCCACGTATCGTGTGGCCCTGACGATGCTGTGTGCCCGCGGTGACATGGAGACCGCGCTCAAGGTGTTCGACGTAATGGCTGCAGCGGGGTGTCAGGTGGATGATCGTGTTTGCAGCGTGATCATTTCAGGCTTCTCCAAGGTCGGGAAGGCTGGGGATGGGCTGGAATTCTATAGGAGGGTGAGGAGAGAGTTCAATGGATTTGAGCCAGGCTTGATCACATTAACCGCTTTTGTCGATGTGCTTGGCCGTGTAGGGAGAACTACTGAGGCAGCACAATTGGTAAGGGAGATGGAAGGGAAGGGGTTGGTTGGTGATGCTGTTTTATATGGCAGCTTGGTTCATGGATACATGAGTAGCGGGTTATTGATGAAAGGGCTCCGTGAGCATCGGGTGATGTTAGATAAGGGCATTGCAGCTGATGTAGTTAGTTATACTACTGTTATTGATGGACTTTGCAGAGAACGTAGTGTGGAAAAAGTGATGGGATTCTTGGATGAGATGAACCGAAGGGATGCTAAGCCGAATTTGATCACTTATACATCATTGATTGGTGGTTTCTGCAAGAGAAACAGGTTGGATGATGCTTTTTCTATAGTGAGGAAACTGGAACAGACAGGAGTGGTGGTGGATGAATATGTTTACTCAATTTTGATTGACAATTTGTGCAAAAAGGGATATTTGGATAGGGCTTTCTCTTTGCTTGAAGAGATGGATAAAAAGGGGATAAAGATTGGAATCGTAACATACAATTCAGTAATAAATGGTCTATGTAAGGTTGGTCACACCAAGAAGGCTGTTGAAATATATGAAGGTATTGCTGCTGATAACTTCACATATAGCACGCTGTTACATGGTCACATTAAGGTAGAAGATGCAACTGGTGTAATGGCAATAAAAGGTAGGCTTGAGAGCAGCGGTGTTACAATTGATGTTGTCACATGCAATGTACTTATCAAAGCATTATTTATGATTAAGAAGGTGGATGATGCCTGCAGCTTGTTTCTTAGAATGCCCGAGATGAGATTAAGGCCTAATATTGTCACATATCATACAGTTATTGACATGATGTGTAAACTTGGAGAAACTGACAGGGCACTGCAGTTGTTTGATGATTACAAAGAAGACATCTTGTTCTCCTCTACAATAGTACACAATTGCCTGATTATAGCATTGTGTAATGGAGGAAAGGTAAACATGGCTGAGCAGATTTTTAATGATCTTATCCAAAGAAATTTAAGGCCTGATTCCTGTACTTACAAGAAGTTGATCCATACACACTTTAAAGAAGGCGGTGAACATGGCGTGCTGAATTTCATTCTTAAGGTGGATGGATCTGAAATTGACTTATTTTCATCTCTATGTAATTATGCTTCCGCTTTCTTAAGCACAAGAGATTGCTACCAAGGAGCATTGGATGTTTACAAGCTTCTAAGAATGAAATCATTTACTGTAACTAGCAAAACATGCTACAGGCTACTCAAATGCTTGCTCCGAAATGGTCATGAACAGACCATCCAGCCATTATTAAGTCAGTTCATTAAAATTCATGGCCTGGATGAACCTAGAATGATTAATATGCTATCTTGCCACCTCAGCAAGAACAGTGTTGGTGAAGCTATTGGGTTTTCCAATTACATGAACAATGGCCGTGTTCCTGTCAGTGTTCTAAGAGAAGCTGTATACACACTAAAGAGGGAAGGTAGAATTCTGGATGCATGCAACTTTTTGAAGGAAGCTGAACAAAATGGTTATTCAGTGGATCTTGCCATGTACTCCATATTAGTGGAAGGCCTTTGTAAAAGTGGTTATCTTGAGAAGGCATTAGACCTATGCGAAAGCATGAAAGAAGAAGGGATTCAGCCAAACATTGTCATCCATAACTCTGTTCTGAATGGTTTGTGCCAGCAGGGATGCCTTACTGAAGCATTCCGGCTATTTGACTACCTAGAAAGCAGTGAAGTGCTTCCGACACTGGTAACTTACTCTATACTTATAGCTGCTTTGTGCAGAGAAGGTTTTTTGGATGACGCTCATGAGTTGTTTCAGAAAATGTCCACCAAGGGTATCAAACCCACTACACGTGTTTACAACTTGCTAATAAGTGGTTATTGTAACTACGGGTTAACTGAGAAAGCACTGGAGCTTATATCACATTTTGAGGAAATATTTCTATTCCCAGACGCTATTACAATTGGTGCAATAATTAATGGACACTGCCTAAAAGGTGACATTGAATCAGCATTAGGCTTCTTTAGTGAATACTATCATAAGGAGATGGTTCCAGATTTTGTTGGCTTCATGAGCCTGGTCAAAGGACTCTATGCAAAAGGAAGAATGGAAGAATCTAGGAGCATCTTGAGAGAGATGTTTCAGTGCAAAGAAGTTGCAGAGTTCATAAACAGTGTTGGGGATAAGATCCAAGCAGAATCTTTTGTTGGCCTTCTATTTTCTGCCTGTGAGCAAGGGAGGATTGATGAGGTCGTGACTATCCTAAATGAAGTGGCGCTCATGTCTGTATCCTCTTCAGATTCTAATAATTGTAGCACGCTTAGTCACCTGAAGAACGTAGAGACACCTGTGGCTTATGATCGTAATATGGATAATCCTGGACAAGTTTTATGTTCAACTACTTATGGTGTTTCTAGCAACTGTCTTCATGGAATTTCTGAAGGCACAGTTCAACCCACAATAGATGGAGCTGAGAATTTATGCACACCAAGTGATGATACTGATATTTACTATGATAATTTGCTACGGAATTCTTTCCATGATGACTTTGACACATATTATCCAGCAATCGCTTCACTTTGCTTAAAAGGGGAACTGATTAAGGCCAACAAAGCAATTGAAGCAATGATTCAGAATTCTAGTTGA More
Protein seq	MPLAGGEPRPPPPLPSLVKLGRAVTPRRVDILLAALLRRRRHRLVGALASQAVANSVRPTARTHLLVASALLDSSRPRDAAARLALAGPATSSARRLWDALLRRACAVRGDARRALEVLSAGVEECGLVFSPSTYRVALTMLCARGDMETALKVFDVMAAAGCQVDDRVCSVIISGFSKVGKAGDGLEFYRRVRREFNGFEPGLITLTAFVDVLGRVGRTTEAAQLVREMEGKGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTVIDGLCRERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDAFSIVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRLESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPDSCTYKKLIHTHFKEGGEHGVLNFILKVDGSEIDLFSSLCNYASAFLSTRDCYQGALDVYKLLRMKSFTVTSKTCYRLLKCLLRNGHEQTIQPLLSQFIKIHGLDEPRMINMLSCHLSKNSVGEAIGFSNYMNNGRVPVSVLREAVYTLKREGRILDACNFLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGCLTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEYYHKEMVPDFVGFMSLVKGLYAKGRMEESRSILREMFQCKEVAEFINSVGDKIQAESFVGLLFSACEQGRIDEVVTILNEVALMSVSSSDSNNCSTLSHLKNVETPVAYDRNMDNPGQVLCSTTYGVSSNCLHGISEGTVQPTIDGAENLCTPSDDTDIYYDNLLRNSFHDDFDTYYPAIASLCLKGELIKANKAIEAMIQNSS More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	None	None	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0263400	RBH	0.672479	0.229492	1.093891
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g15840	RBH	0.393457	0.133543	0.243627
Nipponbare \| IRGSP 1.0 \| RAP-db	NA	NA	NA	NA	NA
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0011480	RBH	0.150654	0.000000	0.335294
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0011130	RBH	0.067917	0.286158	0.758182
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0011470	RBH	0.000000	0.000000	1.400155
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0010980	RBH	0.056428	0.031185	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0011030	RBH	0.690887	0.912795	0.845249
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0149400	RBH	0.647968	8.119924	5.3946275
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0011010	RBH	0.058491	0.042501	0.097969
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0147200	RBH	0.685068	2.093769	3.7672715
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0011020	RBH	0.055946	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0011050	RBH	0.096022	1.600970	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0010990	RBH	0.000000	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0011140	RBH	0.048841	0.126302	0.121997
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0010980	RBH	0.062415	0.644309	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G011130	RBH	0.219921	0.470192	0.187896
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0010990	RBH	0.502473	1.046616	0.621379

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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