Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
Os01g0158600		OGI:01010510 \| 5/16			Nipponbare \| IRGSP 1.0 \| RAP-db			Chr01:3067950-3071237		Homologues MicroCollinearity RGI-JBrowse RAP-DB Ricevarmap2
Gene Symbol		-
DNA seq		GGACGCAATATTTTTTAATATCAGCTTGCGACAACAATAGCATGTTACATAGTTTAGATTACATATGTACTGCATGTCTGCAAGTGACCTTGGTACAGAAAAGTTTACTTCGATACATAATTCAGAGGGCTCTCTGCCTTACTCGAGACCGCTTTCTGATGGGAATTCCCCATATAACCACAATTGAAAGGGCAAATCCAAAGCCGAATCCCAATCCAGCAAAAAGGAATAGCAAAACGTCAAGTGAATTCTTCTTGGAAGGGATCACATTCAGAGATGTAATGTTGATGCATCCTTTCGACAGTGGACGACCGCACAAACCATCGTTCCCCAGAAATGAACTATTGGAGAATGTCAAGAAATGAGGCGATTCTGGTATTTCCCCCTCCAGCTTGTTGTAGGACAGGTTCAACACTGTGAGGAAGTCCAAGGATGCCAACTGCTGTGGGATTTCTCCTGAAAGCTCATTTGATGAGATGTCCAACGACTCAAGCTGGGTTAAACGACCAAGCTGAGGTGGAATCGGCCCCGTCAGTGAGTTGTGTGATATGTTGAGCACGTTTAGCAGAACAAGTTCACCTATAGCTTCAGGTAGGCTGCCATGGAATGCGTTATCTGATAAATCAATGAATACAAGGGTCCTCAAGATCTTAGTAAATGTGATGTCCATCCCTTTGTATGTGAGTGCAACAGTAAAATCATATTTCTCCATTCGTGGGAGATCATGGTCCATGACCAATGTCAAATTTGAATCTTTGATCATCATTGACTTTAACTTGTTAAACCACTCTTGCGGCAAGATGCCAGAGAACTTGTTGGATGCTAGATCAACAATTCTTGCGCTCTGAAATTCACATGTACCTTTTTCTTCCCCCAGAGACTGTGCTACATGCCCAAAAAACTTGTTTGATTTCAGCACAAGAACTTGAAGTTTACGAAGTGTGCCCATCCAACATGGAAAGGAATCATTAATCTGATTGCTTCCAATATTAAGGACCTCCAAGTTTTTGCAAACGGCCAGAGATCTTGGCAGTTTCCCTTCAATCAAATTGCCACTGAAATCCAGTGCCTCAAATGAGCAACTTTCCTTGATATTGTCCGGAAATTCCCCACGAAGCTTATTTTCTTTTAGATTTAATACTTCCAGTTTGTCAACATCCTCTATTAAACAAGAAGGAATTGAACCATCAAAGCTATTGTATGAGAGATCAAGGAGCTGTAAACTCATTGCACTACAAAAGGATGGAGGAATTCTTCCAGAGAAATTGTTTCTACCGGCCTTGAAAAACGAGACATCACTGAGATAATTGGTAAACTTAAATGGTATAGATGAGAACCTGTTTCCTGAGTAGTCAAGCACAGTTGCATATCCTCGAGGTATAGGTATGGGCCCCTCAAACATGTTCTCACTAAGATCAAGTGCTTTCATATCACTTAAAGGAAGAAAAGGGTCATGCCCAACACTTGTAAACTTATTGTTCTTCAAGGATAGTATGTCCATTTTGACCCAATTCTCCCATGCCCATTGGGGTATGGCTCCATCGATATGGTTATATGAAAGATCAAGATATTCGATTTCATCTTGGAACCTCAAGAAATTAGGGAATTTCGAAACATTGCAACCTGATAAACGTAACGCTCCTAGTTTGGGGATGGATGCCGTTGAAGAATTACCCTTTCCATCTACAACGACCAGATTATTATCTGAAAGATCCAAGACAAACAGGTCTAGTAGTTTCCACATCGAGGTAAGCTCTACTGTGCCAATGAAGTTGTTTGAATGAAGCGAGAGTATTTCTAGCTGTGTTAAGTTCAAGATTTGTGAAGGTATCTTTCCTGAAAAGCTGCAATTATACAATAGTAGTTTTCCCAAATTCCTAAGGTTACCGACAGAGGATGGTATTGATCCAGATAAGCCACAATTTGTGAACTGAAGCACAGTCAAAGAGGATAGGTTCGCAACCCATGATGGTATGGACCCTACTAGTCCAAAACCGGAAATCTCTAATGACTTCAAGGATCTGAGGTTTCCAATTGATGAGGGCAGTTCTCCAGAAAAGCCAGTTGCTCCTAGGCCTAGATTCTTCAAAGATTTGAGTTCAGCGATGGAACTTGGTATTATACCATTGAATTCAGTTCCACCAACATATATATTTTCCAAATGACTATCAGATGAAAAGTTTGGCAAAGTACCATATATTCCTGGATTATGGTAAAGATCAATAGTTACTAGTTTCTTGTGCTTAAAGATCAATGGAGAGACAAATCCTTCAAGGTCATTACGTCTAAGTTGGAGGGCAGTCAAATTAGGAAAGTTGGAGAAATCTGGAATTAGCCCGGGCAAACTATTAAACGATAGGTCAATAACAGAAAGTGAGTGCAAACGGGGAAGTGTTGCACATATTGGGCCAGAGAGAGCACAGCAAGACAAACGAAGAACCTGAAGTTTTGGGCAGGAATCGACTAGAGCGTTGCACCATCTGGCGCCATTTTCAGATAAGTTTACTAAGCCAAGGTTGAGCTCCCTTAAATTGCTAAGGTTTGCGACTAAGCTTTCCAGGTTTGGCACAGCGAGCTGTTGGGCATCGAGACTCGAATTCATTTTAAAAACATAGACATCATCAAATGTGTCGATTATCTCAAAGTCTGTGGAGAGATCAAGGGATACCAAATTCACCAAACGGCCGATTCCGGCTGGTACCACGCCTGTAATGTTGGTGCTGCGAAGGCTGAGATGGGTGAGCTCTGTGAGACGCTCAAAGCCGCTGGAAGGGAGAGGAGACCCGTTGAAGTCATTGTCGGCGAGGCTAAGATACTCGAGGGATGTGAGATGGAAGATTGCTGGGTCGAGGCCTCCTCTGCTCTCCAGCTGACGGCCGCCCAGGTCGAGGGAGGTCACGCGGCCGTCGCCGTGGCCACAGCGGACGCCGTCCCAGCGGCAGCAGTCCGTGCCGGGTCGCCATGACCGGAAAGCCGCCGTGGACATGTCGGTGGCGGAGAAGGAGCTCTTCAGCCGGAGCAGCGGTGACTCCTGGTCCGGACGGCATGGGAGAGCGGCCGGCGGTGGTGCTGATGCCGGCGGGAGAAGCGAGAGCGCGGCGACGAGCTGGATTTGTAGCAGGACAAGGAGCAGCATCCGCACTATCGGTGCAGATGCTGCTGCTGCTGGGTCGTGATGGGTGGTCATACTGCGGCGCAGCGGCAGTTTAATTAGCTTGGGATCGATGTGAGTTGCGTTTCTCTCTACTTGGAGGGAGATTTCAAGTTTATAGCAATAAAGCTTCCATT More
CDS seq		ATGACCACCCATCACGACCCAGCAGCAGCAGCATCTGCACCGATAGTGCGGATGCTGCTCCTTGTCCTGCTACAAATCCAGCTCGTCGCCGCGCTCTCGCTTCTCCCGCCGGCATCAGCACCACCGCCGGCCGCTCTCCCATGCCGTCCGGACCAGGAGTCACCGCTGCTCCGGCTGAAGAGCTCCTTCTCCGCCACCGACATGTCCACGGCGGCTTTCCGGTCATGGCGACCCGGCACGGACTGCTGCCGCTGGGACGGCGTCCGCTGTGGCCACGGCGACGGCCGCGTGACCTCCCTCGACCTGGGCGGCCGTCAGCTGGAGAGCAGAGGAGGCCTCGACCCAGCAATCTTCCATCTCACATCCCTCGAGTATCTTAGCCTCGCCGACAATGACTTCAACGGGTCTCCTCTCCCTTCCAGCGGCTTTGAGCGTCTCACAGAGCTCACCCATCTCAGCCTTCGCAGCACCAACATTACAGGCGTGGTACCAGCCGGAATCGGCCGTTTGGTGAATTTGGTATCCCTTGATCTCTCCACAGACTTTGAGATAATCGACACATTTGATGATGTCTATGTTTTTAAAATGAATTCGAGTCTCGATGCCCAACAGCTCGCTGTGCCAAACCTGGAAAGCTTAGTCGCAAACCTTAGCAATTTAAGGGAGCTCAACCTTGGCTTAGTAAACTTATCTGAAAATGGCGCCAGATGGTGCAACGCTCTAGTCGATTCCTGCCCAAAACTTCAGGTTCTTCGTTTGTCTTGCTGTGCTCTCTCTGGCCCAATATGTGCAACACTTCCCCGTTTGCACTCACTTTCTGTTATTGACCTATCGTTTAATAGTTTGCCCGGGCTAATTCCAGATTTCTCCAACTTTCCTAATTTGACTGCCCTCCAACTTAGACGTAATGACCTTGAAGGATTTGTCTCTCCATTGATCTTTAAGCACAAGAAACTAGTAACTATTGATCTTTACCATAATCCAGGAATATATGGTACTTTGCCAAACTTTTCATCTGATAGTCATTTGGAAAATATATATGTTGGTGGAACTGAATTCAATGGTATAATACCAAGTTCCATCGCTGAACTCAAATCTTTGAAGAATCTAGGCCTAGGAGCAACTGGCTTTTCTGGAGAACTGCCCTCATCAATTGGAAACCTCAGATCCTTGAAGTCATTAGAGATTTCCGGTTTTGGACTAGTAGGGTCCATACCATCATGGGTTGCGAACCTATCCTCTTTGACTGTGCTTCAGTTCACAAATTGTGGCTTATCTGGATCAATACCATCCTCTGTCGGTAACCTTAGGAATTTGGGAAAACTACTATTGTATAATTGCAGCTTTTCAGGAAAGATACCTTCACAAATCTTGAACTTAACACAGCTAGAAATACTCTCGCTTCATTCAAACAACTTCATTGGCACAGTAGAGCTTACCTCGATGTGGAAACTACTAGACCTGTTTGTCTTGGATCTTTCAGATAATAATCTGGTCGTTGTAGATGGAAAGGGTAATTCTTCAACGGCATCCATCCCCAAACTAGGAGCGTTACGTTTATCAGGTTGCAATGTTTCGAAATTCCCTAATTTCTTGAGGTTCCAAGATGAAATCGAATATCTTGATCTTTCATATAACCATATCGATGGAGCCATACCCCAATGGGCATGGGAGAATTGGGTCAAAATGGACATACTATCCTTGAAGAACAATAAGTTTACAAGTGTTGGGCATGACCCTTTTCTTCCTTTAAGTGATATGAAAGCACTTGATCTTAGTGAGAACATGTTTGAGGGGCCCATACCTATACCTCGAGGATATGCAACTGTGCTTGACTACTCAGGAAACAGGTTCTCATCTATACCATTTAAGTTTACCAATTATCTCAGTGATGTCTCGTTTTTCAAGGCCGGTAGAAACAATTTCTCTGGAAGAATTCCTCCATCCTTTTGTAGTGCAATGAGTTTACAGCTCCTTGATCTCTCATACAATAGCTTTGATGGTTCAATTCCTTCTTGTTTAATAGAGGATGTTGACAAACTGGAAGTATTAAATCTAAAAGAAAATAAGCTTCGTGGGGAATTTCCGGACAATATCAAGGAAAGTTGCTCATTTGAGGCACTGGATTTCAGTGGCAATTTGATTGAAGGGAAACTGCCAAGATCTCTGGCCGTTTGCAAAAACTTGGAGGTCCTTAATATTGGAAGCAATCAGATTAATGATTCCTTTCCATGTTGGATGGGCACACTTCGTAAACTTCAAGTTCTTGTGCTGAAATCAAACAAGTTTTTTGGGCATGTAGCACAGTCTCTGGGGGAAGAAAAAGGTACATGTGAATTTCAGAGCGCAAGAATTGTTGATCTAGCATCCAACAAGTTCTCTGGCATCTTGCCGCAAGAGTGGTTTAACAAGTTAAAGTCAATGATGATCAAAGATTCAAATTTGACATTGGTCATGGACCATGATCTCCCACGAATGGAGAAATATGATTTTACTGTTGCACTCACATACAAAGGGATGGACATCACATTTACTAAGATCTTGAGGACCCTTGTATTCATTGATTTATCAGATAACGCATTCCATGGCAGCCTACCTGAAGCTATAGGTGAACTTGTTCTGCTAAACGTGCTCAACATATCACACAACTCACTGACGGGGCCGATTCCACCTCAGCTTGGTCGTTTAACCCAGCTTGAGTCGTTGGACATCTCATCAAATGAGCTTTCAGGAGAAATCCCACAGCAGTTGGCATCCTTGGACTTCCTCACAGTGTTGAACCTGTCCTACAACAAGCTGGAGGGGGAAATACCAGAATCGCCTCATTTCTTGACATTCTCCAATAGTTCATTTCTGGGGAACGATGGTTTGTGCGGTCGTCCACTGTCGAAAGGATGCATCAACATTACATCTCTGAATGTGATCCCTTCCAAGAAGAATTCACTTGACGTTTTGCTATTCCTTTTTGCTGGATTGGGATTCGGCTTTGGATTTGCCCTTTCAATTGTGGTTATATGGGGAATTCCCATCAGAAAGCGGTCTCGAGTAAGGCAGAGAGCCCTCTGA More
Protein seq		MTTHHDPAAAASAPIVRMLLLVLLQIQLVAALSLLPPASAPPPAALPCRPDQESPLLRLKSSFSATDMSTAAFRSWRPGTDCCRWDGVRCGHGDGRVTSLDLGGRQLESRGGLDPAIFHLTSLEYLSLADNDFNGSPLPSSGFERLTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLSTDFEIIDTFDDVYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNLGLVNLSENGARWCNALVDSCPKLQVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNPGIYGTLPNFSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEILSLHSNNFIGTVELTSMWKLLDLFVLDLSDNNLVVVDGKGNSSTASIPKLGALRLSGCNVSKFPNFLRFQDEIEYLDLSYNHIDGAIPQWAWENWVKMDILSLKNNKFTSVGHDPFLPLSDMKALDLSENMFEGPIPIPRGYATVLDYSGNRFSSIPFKFTNYLSDVSFFKAGRNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEDVDKLEVLNLKENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKFFGHVAQSLGEEKGTCEFQSARIVDLASNKFSGILPQEWFNKLKSMMIKDSNLTLVMDHDLPRMEKYDFTVALTYKGMDITFTKILRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLNLSYNKLEGEIPESPHFLTFSNSSFLGNDGLCGRPLSKGCINITSLNVIPSKKNSLDVLLFLFAGLGFGFGFALSIVVIWGIPIRKRSRVRQRAL
Function		Receptor-like protein 7 [UniProtKB/Swiss-Prot:Q9C699]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os01g0158600	Os01t0158600-01	Chr01	3067950	3071237	-	irgsp1_rep
CDS seq	ATGACCACCCATCACGACCCAGCAGCAGCAGCATCTGCACCGATAGTGCGGATGCTGCTCCTTGTCCTGCTACAAATCCAGCTCGTCGCCGCGCTCTCGCTTCTCCCGCCGGCATCAGCACCACCGCCGGCCGCTCTCCCATGCCGTCCGGACCAGGAGTCACCGCTGCTCCGGCTGAAGAGCTCCTTCTCCGCCACCGACATGTCCACGGCGGCTTTCCGGTCATGGCGACCCGGCACGGACTGCTGCCGCTGGGACGGCGTCCGCTGTGGCCACGGCGACGGCCGCGTGACCTCCCTCGACCTGGGCGGCCGTCAGCTGGAGAGCAGAGGAGGCCTCGACCCAGCAATCTTCCATCTCACATCCCTCGAGTATCTTAGCCTCGCCGACAATGACTTCAACGGGTCTCCTCTCCCTTCCAGCGGCTTTGAGCGTCTCACAGAGCTCACCCATCTCAGCCTTCGCAGCACCAACATTACAGGCGTGGTACCAGCCGGAATCGGCCGTTTGGTGAATTTGGTATCCCTTGATCTCTCCACAGACTTTGAGATAATCGACACATTTGATGATGTCTATGTTTTTAAAATGAATTCGAGTCTCGATGCCCAACAGCTCGCTGTGCCAAACCTGGAAAGCTTAGTCGCAAACCTTAGCAATTTAAGGGAGCTCAACCTTGGCTTAGTAAACTTATCTGAAAATGGCGCCAGATGGTGCAACGCTCTAGTCGATTCCTGCCCAAAACTTCAGGTTCTTCGTTTGTCTTGCTGTGCTCTCTCTGGCCCAATATGTGCAACACTTCCCCGTTTGCACTCACTTTCTGTTATTGACCTATCGTTTAATAGTTTGCCCGGGCTAATTCCAGATTTCTCCAACTTTCCTAATTTGACTGCCCTCCAACTTAGACGTAATGACCTTGAAGGATTTGTCTCTCCATTGATCTTTAAGCACAAGAAACTAGTAACTATTGATCTTTACCATAATCCAGGAATATATGGTACTTTGCCAAACTTTTCATCTGATAGTCATTTGGAAAATATATATGTTGGTGGAACTGAATTCAATGGTATAATACCAAGTTCCATCGCTGAACTCAAATCTTTGAAGAATCTAGGCCTAGGAGCAACTGGCTTTTCTGGAGAACTGCCCTCATCAATTGGAAACCTCAGATCCTTGAAGTCATTAGAGATTTCCGGTTTTGGACTAGTAGGGTCCATACCATCATGGGTTGCGAACCTATCCTCTTTGACTGTGCTTCAGTTCACAAATTGTGGCTTATCTGGATCAATACCATCCTCTGTCGGTAACCTTAGGAATTTGGGAAAACTACTATTGTATAATTGCAGCTTTTCAGGAAAGATACCTTCACAAATCTTGAACTTAACACAGCTAGAAATACTCTCGCTTCATTCAAACAACTTCATTGGCACAGTAGAGCTTACCTCGATGTGGAAACTACTAGACCTGTTTGTCTTGGATCTTTCAGATAATAATCTGGTCGTTGTAGATGGAAAGGGTAATTCTTCAACGGCATCCATCCCCAAACTAGGAGCGTTACGTTTATCAGGTTGCAATGTTTCGAAATTCCCTAATTTCTTGAGGTTCCAAGATGAAATCGAATATCTTGATCTTTCATATAACCATATCGATGGAGCCATACCCCAATGGGCATGGGAGAATTGGGTCAAAATGGACATACTATCCTTGAAGAACAATAAGTTTACAAGTGTTGGGCATGACCCTTTTCTTCCTTTAAGTGATATGAAAGCACTTGATCTTAGTGAGAACATGTTTGAGGGGCCCATACCTATACCTCGAGGATATGCAACTGTGCTTGACTACTCAGGAAACAGGTTCTCATCTATACCATTTAAGTTTACCAATTATCTCAGTGATGTCTCGTTTTTCAAGGCCGGTAGAAACAATTTCTCTGGAAGAATTCCTCCATCCTTTTGTAGTGCAATGAGTTTACAGCTCCTTGATCTCTCATACAATAGCTTTGATGGTTCAATTCCTTCTTGTTTAATAGAGGATGTTGACAAACTGGAAGTATTAAATCTAAAAGAAAATAAGCTTCGTGGGGAATTTCCGGACAATATCAAGGAAAGTTGCTCATTTGAGGCACTGGATTTCAGTGGCAATTTGATTGAAGGGAAACTGCCAAGATCTCTGGCCGTTTGCAAAAACTTGGAGGTCCTTAATATTGGAAGCAATCAGATTAATGATTCCTTTCCATGTTGGATGGGCACACTTCGTAAACTTCAAGTTCTTGTGCTGAAATCAAACAAGTTTTTTGGGCATGTAGCACAGTCTCTGGGGGAAGAAAAAGGTACATGTGAATTTCAGAGCGCAAGAATTGTTGATCTAGCATCCAACAAGTTCTCTGGCATCTTGCCGCAAGAGTGGTTTAACAAGTTAAAGTCAATGATGATCAAAGATTCAAATTTGACATTGGTCATGGACCATGATCTCCCACGAATGGAGAAATATGATTTTACTGTTGCACTCACATACAAAGGGATGGACATCACATTTACTAAGATCTTGAGGACCCTTGTATTCATTGATTTATCAGATAACGCATTCCATGGCAGCCTACCTGAAGCTATAGGTGAACTTGTTCTGCTAAACGTGCTCAACATATCACACAACTCACTGACGGGGCCGATTCCACCTCAGCTTGGTCGTTTAACCCAGCTTGAGTCGTTGGACATCTCATCAAATGAGCTTTCAGGAGAAATCCCACAGCAGTTGGCATCCTTGGACTTCCTCACAGTGTTGAACCTGTCCTACAACAAGCTGGAGGGGGAAATACCAGAATCGCCTCATTTCTTGACATTCTCCAATAGTTCATTTCTGGGGAACGATGGTTTGTGCGGTCGTCCACTGTCGAAAGGATGCATCAACATTACATCTCTGAATGTGATCCCTTCCAAGAAGAATTCACTTGACGTTTTGCTATTCCTTTTTGCTGGATTGGGATTCGGCTTTGGATTTGCCCTTTCAATTGTGGTTATATGGGGAATTCCCATCAGAAAGCGGTCTCGAGTAAGGCAGAGAGCCCTCTGA More
Protein seq	MTTHHDPAAAASAPIVRMLLLVLLQIQLVAALSLLPPASAPPPAALPCRPDQESPLLRLKSSFSATDMSTAAFRSWRPGTDCCRWDGVRCGHGDGRVTSLDLGGRQLESRGGLDPAIFHLTSLEYLSLADNDFNGSPLPSSGFERLTELTHLSLRSTNITGVVPAGIGRLVNLVSLDLSTDFEIIDTFDDVYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNLGLVNLSENGARWCNALVDSCPKLQVLRLSCCALSGPICATLPRLHSLSVIDLSFNSLPGLIPDFSNFPNLTALQLRRNDLEGFVSPLIFKHKKLVTIDLYHNPGIYGTLPNFSSDSHLENIYVGGTEFNGIIPSSIAELKSLKNLGLGATGFSGELPSSIGNLRSLKSLEISGFGLVGSIPSWVANLSSLTVLQFTNCGLSGSIPSSVGNLRNLGKLLLYNCSFSGKIPSQILNLTQLEILSLHSNNFIGTVELTSMWKLLDLFVLDLSDNNLVVVDGKGNSSTASIPKLGALRLSGCNVSKFPNFLRFQDEIEYLDLSYNHIDGAIPQWAWENWVKMDILSLKNNKFTSVGHDPFLPLSDMKALDLSENMFEGPIPIPRGYATVLDYSGNRFSSIPFKFTNYLSDVSFFKAGRNNFSGRIPPSFCSAMSLQLLDLSYNSFDGSIPSCLIEDVDKLEVLNLKENKLRGEFPDNIKESCSFEALDFSGNLIEGKLPRSLAVCKNLEVLNIGSNQINDSFPCWMGTLRKLQVLVLKSNKFFGHVAQSLGEEKGTCEFQSARIVDLASNKFSGILPQEWFNKLKSMMIKDSNLTLVMDHDLPRMEKYDFTVALTYKGMDITFTKILRTLVFIDLSDNAFHGSLPEAIGELVLLNVLNISHNSLTGPIPPQLGRLTQLESLDISSNELSGEIPQQLASLDFLTVLNLSYNKLEGEIPESPHFLTFSNSSFLGNDGLCGRPLSKGCINITSLNVIPSKKNSLDVLLFLFAGLGFGFGFALSIVVIWGIPIRKRSRVRQRAL More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	None	None	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0158600	RBH	0.817029	0.989171	2.511921
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g06520	RBH	0.547116	0.600843	0.587500
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0163000	SBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0004490	SBH	0.0	0.0	0.220171
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0004200	SBH	0.0	0.0	0.0
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0004480	SBH	0.0	0.0	0.0
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0003900	RBH	0.090938	0.029988	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0004680	RBH	0.968978	0.923680	1.727262
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0056800	SBH	0.10463	0.270119	0.10602
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0004600	RBH	0.028458	0.0	0.194113
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0058900	SBH	0	0	0
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0004450	RBH	0.000000	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0004060	RBH	0.057143	0.946445	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0004670	RBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0004280	SBH	0.0	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0004210	SBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G004140	RBH	0.292217	0.129017	0.793193
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0004010	RBH	0.203341	4.979234	5.900910

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.