Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g32710 | OGI:12052810 | 11/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:19754146-19757913 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AGTTAAAATGATGGCTTTATAATATTAATGTAATATCAAATCTTTGATAGGGCGCACAGCATGCATCAAAAGTTCTGAAATTCGAGAACGCCCTCATTCGTGGATTGTTTTCCTCTTCATGGCTAGGATTTTTCCCTAACCCCAGCCTGCCAAATAAGGCCACTAGAGTTAGGAACCATCTTCTCTTCTAGGGGTGAGATGGAATATTCTCTTGCCTATCAAAACAAGGAGAGAAAAAAAAGGTTATTATTGTAATGGAAACCTAACTAGAAATGAGCAAGGAGACCGGACATATCAGGGAAGATAACTGTTGAAACGGAAATATTCATACCTAATAACATGTTAGTTTATATCAACTTTATGGATTGGCAAAATCTTCTCCCATTCAGAACCATTGGTTTTACACCCCACCTTTAAACGAGTGCAACAACCACTTATTTGAAGAGCCCACAGATTGGGGGGCATAGCAGGAAGTGTCTCGAGGAGGGGAGCATTACACAGAACCAGACTCCTCAGGGAGTGCAAAGTGTCCATAGTTGAAGGCAGTGATCTGAGCAGATTTGCATTGTTTATTTCTATATGCTCCAACTGAGAACTATTCTGCAATAACCATTCCTGAGGCAACTCAAGCATTTCAGATCCATTAGATACAAGTCTTCTAGTGAGGCAGAAGTTTCTAAATGGATTCTGAAGAAGCAAAAGATGGTCATCAATTTCAAGGGTGTCAAGCACAAGAGAAGACCGCATAGCTGGTGCTACCGGAATCCCTGAAGATGTAGCAGTTAGATGAGTGCACTGCTGTATTTTCAGTATTTTCAAGGAAGCAAGTGCTCCTAGGCCACCCAAGGTCGACAAACTCTGACATTGAAGAATTTCAATACTCTCCATTGTGGATATTCTTCTAAAATGTTCTTCACTTGGGAGCTTCTCGAGCATGCTGCAGCCGATGACTTTCAAGCTAGTAAGAGCTTTGTAGTGTTGCTCTTCTACAATACATGATCCGAAGGACAACAAATTAGGACAAGAATCTACATGGAGACTGCACAGCTGTGGATCCACTGTAGACACGTTTTGTAATGCCATCTGACTACTGGTTGGCAGACAAGATATTCCAACTTTATTTATCCCCAGATGCTTTAGACTATAAGGTAGATGAGGTAAATTCAACAGTTCTAGGCATTCTTTTACAACTAAGGTAACCAAGAAAGGAGGCAATCCATCACCATCAGGTCCCCCAATGCATTTCAGATTTGGTAGGTCCTCCAGTAAGACATGCTTCAGACTAGATAGACTCGCGAAGGAAGGGAGATCATCCCATTTAGGACATCCAACAATCTTCAAGCGTACCAATTTGGTAAGGACTTTCCTTCGAATCCACAGTGGAGGCAAAACACCCTTATAACCAGAAATTCTTAAATGCCTAATACGTTTGTAAGGAACAACTGTATCAAGAATTCGCTCATTAATCCTATTATGTTGATTTGACCACTCCAAAGATAACAGTTCCATATCATTCTTATTGCTCAATTCAGCCAAGGAAGCTTCACTACAGTTGCTTACATTCTCAACATCAAACACAAAGACTTTCCGGAGGTTCTTTAAGTCCTTCAGCTCAGATATTTTGTGTCCTTCTTCTTTCTTCACGCTCAACCCATTCAACTCACGAAGATTAGTTAGTCTTCCAATATGAGGGACTCTGGATAATGCAGGTTTTGGAAGATACAGTTTCTGCAAGTTAGCTAGATTGCATAAATCACTGACGCTCGCCTGTTCTTCTCCTTCTATCTTCAGTAGCTTAAGGACCTCCAGGTGGAAGAGTTTAAACAATTTATTCAGATTGCTTTTGTTAGTAGCAGACATACAGATGTACCTTAAGTGCTTTAGTTCCGCAATAGCATCATTTATGTCAAACCATCCATGTCCATCAAACTTTAAGAGCCGCAAGCTTGTTATGCCCTTCATTGCTTTCTTAAGATTATCAGCCAGTCCTGCCTTAAGTGGCCATTCCTCATTCGCTATAATAAGAGTACGGAGGTACTTGGACTTGGATATAACATTGATAGCTTCAGAATTTATCCCTTCAATGTATAGGTGACGTACTCTTTCAGATACATCAGCAGTATTGCATTTGGTGACTTTAAATGTTGAGAATTCCTCGCTAGAAACAAGGCATGACAATTCATAAATCAAATCATGCATGACATAGTAATCTGTAGAAGGATCGGGATGTAATTCTCTGGGTATCAGTGAAAAGAATGATTTTTTCAACAGAATATTGAAGTGTTCCCGAGCAATTTTCTCCTGGCCACTGTTCCCCTTTGTGCTTTGCAGTATCAATCCTGAACTCACCCACATCTCGGTAAGCTCTTCCATCCTGAATTTGTAATGGGATGGAAATATGCTGCAGTACTGAAAGCAAAGCTGCACCTCTGAGGTTAGATCTTCATAGCTCAACCTGAGCATCTCCATAACCCTAGGTGCAATATCGTCTAAATGACATACTTTTTTATTTAAGAAGTCATTCCAATTGCTATGATCAGTGTTGTCTCTGAGGTACTGACCAATCACTTTTGCTACAAAAGGACATCCTTCGAGGTTGTGTACAATCCATTCAGCTACACTTCGAAGTTCCAAATCTTCATTAGGAGGCACATGATGGTTCAAGATCTGCATAATATCTCTGTGATCTAAACCCCCCAGTACAACACATTTATATTCATTTGATGGCATTTGGCGTTTAACAGCATCAGCCACTGACCCCATTCGGGTCGTGAGCAAGATTCTACCTCCCATTGGTGCAATAATGTTCCTCAGGGGAGATAAAAATTGCCCCCATAGCTCATTTTCCCCATCCTCCCATGCATCATCCAGAACCAGTAAAAATCTCTTAGTAACCAACTCTTTAGTGAGATCTAATTGCAGTATGTCCAAAGAAGATGCAGTAACTCTGTTCCTGTTAATGGATTCCAACATTCTTGCCACCAACACTACAGGTTCAAAGCGCTTGGGAACATGCACCCAGATAATCATGTCGCCGAAATGATCCTGAACCTTCTTATCTTGACAGACAAGCTGAGCAAGAGATGTTTTCCCCATACCACCCCCACCCACTATTGCACACACTGAGAGTTTGCTATCTCTCCCTGGAGCCTCAACACCCAGCCATTCAATTATCTCATCTTTTTCCTTCTGCCTTCCAAATACAGGTGTTGCTAACACTCTCGTTGTCTCATTTCGGTTGGTCGTATCTTGTATGCGCCCTTCATTACGTTGAGGGGAAGTGTGAAGTCCATGCCCAGTTACCACTCGGAAATTTGCAGCATCATCAAAGACAGATTCTAACCTCATCAGAGCATTCTTGAGATTCTTTCTACTGCTGTTGGAGTTATTAGAACTTACAGACAGCTGCAATCTCATGAATTTAGGGACCAAGGATGATGAAGATTCTGCCTTCCGATTGCACACCTTCTCCAAGTCAAAGAAGTCAAGCTCATCAAGTGCATCCTCGGCCTCCTGTATGGCATCGCGGAACTGCCAAAGCCATTCAACCAACCCTTGGTTGTCCTGGATCTCCTGCAGAGTAATGCCATATAACATTGCTTGAGTTTTGGAGAGCTTACTCTTCAACTTAGTCTTCAAATCCTCATTCTCCAGCGGAAGGCGATCAAGGGCTTTGTTCACAACATAACTGATCACTGTCTCTGCAACTTTCTTCCCAACAAAAATGGCTGAGCTCTTGGCAAAAGCAATAGCAGCAGCTTCCACCAT
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| CDS seq | ATGGTGGAAGCTGCTGCTATTGCTTTTGCCAAGAGCTCAGCCATTTTTGTTGGGAAGAAAGTTGCAGAGACAGTGATCAGTTATGTTGTGAACAAAGCCCTTGATCGCCTTCCGCTGGAGAATGAGGATTTGAAGACTAAGTTGAAGAGTAAGCTCTCCAAAACTCAAGCAATGTTATATGGCATTACTCTGCAGGAGATCCAGGACAACCAAGGGTTGGTTGAATGGCTTTGGCAGTTCCGCGATGCCATACAGGAGGCCGAGGATGCACTTGATGAGCTTGACTTCTTTGACTTGGAGAAGGTGTGCAATCGGAAGGCAGAATCTTCATCATCCTTGGTCCCTAAATTCATGAGATTGCAGCTGTCTGTAAGTTCTAATAACTCCAACAGCAGTAGAAAGAATCTCAAGAATGCTCTGATGAGGTTAGAATCTGTCTTTGATGATGCTGCAAATTTCCGAGTGGTAACTGGGCATGGACTTCACACTTCCCCTCAACGTAATGAAGGGCGCATACAAGATACGACCAACCGAAATGAGACAACGAGAGTGTTAGCAACACCTGTATTTGGAAGGCAGAAGGAAAAAGATGAGATAATTGAATGGCTGGGTGTTGAGGCTCCAGGGAGAGATAGCAAACTCTCAGTGTGTGCAATAGTGGGTGGGGGTGGTATGGGGAAAACATCTCTTGCTCAGCTTGTCTGTCAAGATAAGAAGGTTCAGGATCATTTCGGCGACATGATTATCTGGGTGCATGTTCCCAAGCGCTTTGAACCTGTAGTGTTGGTGGCAAGAATGTTGGAATCCATTAACAGGAACAGAGTTACTGCATCTTCTTTGGACATACTGCAATTAGATCTCACTAAAGAGTTGGTTACTAAGAGATTTTTACTGGTTCTGGATGATGCATGGGAGGATGGGGAAAATGAGCTATGGGGGCAATTTTTATCTCCCCTGAGGAACATTATTGCACCAATGGGAGGTAGAATCTTGCTCACGACCCGAATGGGGTCAGTGGCTGATGCTGTTAAACGCCAAATGCCATCAAATGAATATAAATGTGTTGTACTGGGGGGTTTAGATCACAGAGATATTATGCAGATCTTGAACCATCATGTGCCTCCTAATGAAGATTTGGAACTTCGAAGTGTAGCTGAATGGATTGTACACAACCTCGAAGGATGTCCTTTTGTAGCAAAAGTGATTGGTCAGTACCTCAGAGACAACACTGATCATAGCAATTGGAATGACTTCTTAAATAAAAAAGTATGTCATTTAGACGATATTGCACCTAGGGTTATGGAGATGCTCAGGTTGAGCTATGAAGATCTAACCTCAGAGGTGCAGCTTTGCTTTCAGTACTGCAGCATATTTCCATCCCATTACAAATTCAGGATGGAAGAGCTTACCGAGATGTGGGTGAGTTCAGGATTGATACTGCAAAGCACAAAGGGGAACAGTGGCCAGGAGAAAATTGCTCGGGAACACTTCAATATTCTGTTGAAAAAATCATTCTTTTCACTGATACCCAGAGAATTACATCCCGATCCTTCTACAGATTACTATGTCATGCATGATTTGATTTATGAATTGTCATGCCTTGTTTCTAGCGAGGAATTCTCAACATTTAAAGTCACCAAATGCAATACTGCTGATGTATCTGAAAGAGTACGTCACCTATACATTGAAGGGATAAATTCTGAAGCTATCAATGTTATATCCAAGTCCAAGTACCTCCGTACTCTTATTATAGCGAATGAGGAATGGCCACTTAAGGCAGGACTGGCTGATAATCTTAAGAAAGCAATGAAGGGCATAACAAGCTTGCGGCTCTTAAAGTTTGATGGACATGGATGGTTTGACATAAATGATGCTATTGCGGAACTAAAGCACTTAAGGTACATCTGTATGTCTGCTACTAACAAAAGCAATCTGAATAAATTGTTTAAACTCTTCCACCTGGAGGTCCTTAAGCTACTGAAGATAGAAGGAGAAGAACAGGCGAGCGTCAGTGATTTATGCAATCTAGCTAACTTGCAGAAACTGTATCTTCCAAAACCTGCATTATCCAGAGTCCCTCATATTGGAAGACTAACTAATCTTCGTGAGTTGAATGGGTTGAGCGTGAAGAAAGAAGAAGGACACAAAATATCTGAGCTGAAGGACTTAAAGAACCTCCGGAAAGTCTTTGTGTTTGATGTTGAGAATGTAAGCAACTGTAGTGAAGCTTCCTTGGCTGAATTGAGCAATAAGAATGATATGGAACTGTTATCTTTGGAGTGGTCAAATCAACATAATAGGATTAATGAGCGAATTCTTGATACAGTTGTTCCTTACAAACGTATTAGGCATTTAAGAATTTCTGGTTATAAGGGTGTTTTGCCTCCACTGTGGATTCGAAGGAAAGTCCTTACCAAATTGGTACGCTTGAAGATTGTTGGATGTCCTAAATGGGATGATCTCCCTTCCTTCGCGAGTCTATCTAGTCTGAAGCATGTCTTACTGGAGGACCTACCAAATCTGAAATGCATTGGGGGACCTGATGGTGATGGATTGCCTCCTTTCTTGGTTACCTTAGTTGTAAAAGAATGCCTAGAACTGTTGAATTTACCTCATCTACCTTATAGTCTAAAGCATCTGGGGATAAATAAAGTTGGAATATCTTGTCTGCCAACCAGTAGTCAGATGGCATTACAAAACGTGTCTACAGTGGATCCACAGCTGTGCAGTCTCCATGTAGATTCTTGTCCTAATTTGTTGTCCTTCGGATCATGTATTGTAGAAGAGCAACACTACAAAGCTCTTACTAGCTTGAAAGTCATCGGCTGCAGCATGCTCGAGAAGCTCCCAAGTGAAGAACATTTTAGAAGAATATCCACAATGGAGAGTATTGAAATTCTTCAATGTCAGAGTTTGTCGACCTTGGGTGGCCTAGGAGCACTTGCTTCCTTGAAAATACTGAAAATACAGCAGTGCACTCATCTAACTGCTACATCTTCAGGGATTCCGGTAGCACCAGCTATGCGGTCTTCTCTTGTGCTTGACACCCTTGAAATTGATGACCATCTTTTGCTTCTTCAGAATCCATTTAGAAACTTCTGCCTCACTAGAAGACTTGTATCTAATGGATCTGAAATGCTTGAGTTGCCTCAGGAATGGTTATTGCAGAATAGTTCTCAGTTGGAGCATATAGAAATAAACAATGCAAATCTGCTCAGATCACTGCCTTCAACTATGGACACTTTGCACTCCCTGAGGAGTCTGGTTCTGTGTAATGCTCCCCTCCTCGAGACACTTCCTGCTATGCCCCCCAATCTGTGGGCTCTTCAAATAAGTGGTTGTTGCACTCGTTTAAAGGTGGGGTGTAAAACCAATGGTTCTGAATGGGAGAAGATTTTGCCAATCCATAAAGTTGATATAAACTAA
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| Protein seq | MVEAAAIAFAKSSAIFVGKKVAETVISYVVNKALDRLPLENEDLKTKLKSKLSKTQAMLYGITLQEIQDNQGLVEWLWQFRDAIQEAEDALDELDFFDLEKVCNRKAESSSSLVPKFMRLQLSVSSNNSNSSRKNLKNALMRLESVFDDAANFRVVTGHGLHTSPQRNEGRIQDTTNRNETTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSKLSVCAIVGGGGMGKTSLAQLVCQDKKVQDHFGDMIIWVHVPKRFEPVVLVARMLESINRNRVTASSLDILQLDLTKELVTKRFLLVLDDAWEDGENELWGQFLSPLRNIIAPMGGRILLTTRMGSVADAVKRQMPSNEYKCVVLGGLDHRDIMQILNHHVPPNEDLELRSVAEWIVHNLEGCPFVAKVIGQYLRDNTDHSNWNDFLNKKVCHLDDIAPRVMEMLRLSYEDLTSEVQLCFQYCSIFPSHYKFRMEELTEMWVSSGLILQSTKGNSGQEKIAREHFNILLKKSFFSLIPRELHPDPSTDYYVMHDLIYELSCLVSSEEFSTFKVTKCNTADVSERVRHLYIEGINSEAINVISKSKYLRTLIIANEEWPLKAGLADNLKKAMKGITSLRLLKFDGHGWFDINDAIAELKHLRYICMSATNKSNLNKLFKLFHLEVLKLLKIEGEEQASVSDLCNLANLQKLYLPKPALSRVPHIGRLTNLRELNGLSVKKEEGHKISELKDLKNLRKVFVFDVENVSNCSEASLAELSNKNDMELLSLEWSNQHNRINERILDTVVPYKRIRHLRISGYKGVLPPLWIRRKVLTKLVRLKIVGCPKWDDLPSFASLSSLKHVLLEDLPNLKCIGGPDGDGLPPFLVTLVVKECLELLNLPHLPYSLKHLGINKVGISCLPTSSQMALQNVSTVDPQLCSLHVDSCPNLLSFGSCIVEEQHYKALTSLKVIGCSMLEKLPSEEHFRRISTMESIEILQCQSLSTLGGLGALASLKILKIQQCTHLTATSSGIPVAPAMRSSLVLDTLEIDDHLLLLQNPFRNFCLTRRLVSNGSEMLELPQEWLLQNSSQLEHIEINNANLLRSLPSTMDTLHSLRSLVLCNAPLLETLPAMPPNLWALQISGCCTRLKVGCKTNGSEWEKILPIHKVDIN |
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| Function | Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g32710 | LOC_Os12g32710.1 | Chr12 | 19754146 | 19757913 | - | MSU_osa1r7 | ||
| CDS seq | ATGGTGGAAGCTGCTGCTATTGCTTTTGCCAAGAGCTCAGCCATTTTTGTTGGGAAGAAAGTTGCAGAGACAGTGATCAGTTATGTTGTGAACAAAGCCCTTGATCGCCTTCCGCTGGAGAATGAGGATTTGAAGACTAAGTTGAAGAGTAAGCTCTCCAAAACTCAAGCAATGTTATATGGCATTACTCTGCAGGAGATCCAGGACAACCAAGGGTTGGTTGAATGGCTTTGGCAGTTCCGCGATGCCATACAGGAGGCCGAGGATGCACTTGATGAGCTTGACTTCTTTGACTTGGAGAAGGTGTGCAATCGGAAGGCAGAATCTTCATCATCCTTGGTCCCTAAATTCATGAGATTGCAGCTGTCTGTAAGTTCTAATAACTCCAACAGCAGTAGAAAGAATCTCAAGAATGCTCTGATGAGGTTAGAATCTGTCTTTGATGATGCTGCAAATTTCCGAGTGGTAACTGGGCATGGACTTCACACTTCCCCTCAACGTAATGAAGGGCGCATACAAGATACGACCAACCGAAATGAGACAACGAGAGTGTTAGCAACACCTGTATTTGGAAGGCAGAAGGAAAAAGATGAGATAATTGAATGGCTGGGTGTTGAGGCTCCAGGGAGAGATAGCAAACTCTCAGTGTGTGCAATAGTGGGTGGGGGTGGTATGGGGAAAACATCTCTTGCTCAGCTTGTCTGTCAAGATAAGAAGGTTCAGGATCATTTCGGCGACATGATTATCTGGGTGCATGTTCCCAAGCGCTTTGAACCTGTAGTGTTGGTGGCAAGAATGTTGGAATCCATTAACAGGAACAGAGTTACTGCATCTTCTTTGGACATACTGCAATTAGATCTCACTAAAGAGTTGGTTACTAAGAGATTTTTACTGGTTCTGGATGATGCATGGGAGGATGGGGAAAATGAGCTATGGGGGCAATTTTTATCTCCCCTGAGGAACATTATTGCACCAATGGGAGGTAGAATCTTGCTCACGACCCGAATGGGGTCAGTGGCTGATGCTGTTAAACGCCAAATGCCATCAAATGAATATAAATGTGTTGTACTGGGGGGTTTAGATCACAGAGATATTATGCAGATCTTGAACCATCATGTGCCTCCTAATGAAGATTTGGAACTTCGAAGTGTAGCTGAATGGATTGTACACAACCTCGAAGGATGTCCTTTTGTAGCAAAAGTGATTGGTCAGTACCTCAGAGACAACACTGATCATAGCAATTGGAATGACTTCTTAAATAAAAAAGTATGTCATTTAGACGATATTGCACCTAGGGTTATGGAGATGCTCAGGTTGAGCTATGAAGATCTAACCTCAGAGGTGCAGCTTTGCTTTCAGTACTGCAGCATATTTCCATCCCATTACAAATTCAGGATGGAAGAGCTTACCGAGATGTGGGTGAGTTCAGGATTGATACTGCAAAGCACAAAGGGGAACAGTGGCCAGGAGAAAATTGCTCGGGAACACTTCAATATTCTGTTGAAAAAATCATTCTTTTCACTGATACCCAGAGAATTACATCCCGATCCTTCTACAGATTACTATGTCATGCATGATTTGATTTATGAATTGTCATGCCTTGTTTCTAGCGAGGAATTCTCAACATTTAAAGTCACCAAATGCAATACTGCTGATGTATCTGAAAGAGTACGTCACCTATACATTGAAGGGATAAATTCTGAAGCTATCAATGTTATATCCAAGTCCAAGTACCTCCGTACTCTTATTATAGCGAATGAGGAATGGCCACTTAAGGCAGGACTGGCTGATAATCTTAAGAAAGCAATGAAGGGCATAACAAGCTTGCGGCTCTTAAAGTTTGATGGACATGGATGGTTTGACATAAATGATGCTATTGCGGAACTAAAGCACTTAAGGTACATCTGTATGTCTGCTACTAACAAAAGCAATCTGAATAAATTGTTTAAACTCTTCCACCTGGAGGTCCTTAAGCTACTGAAGATAGAAGGAGAAGAACAGGCGAGCGTCAGTGATTTATGCAATCTAGCTAACTTGCAGAAACTGTATCTTCCAAAACCTGCATTATCCAGAGTCCCTCATATTGGAAGACTAACTAATCTTCGTGAGTTGAATGGGTTGAGCGTGAAGAAAGAAGAAGGACACAAAATATCTGAGCTGAAGGACTTAAAGAACCTCCGGAAAGTCTTTGTGTTTGATGTTGAGAATGTAAGCAACTGTAGTGAAGCTTCCTTGGCTGAATTGAGCAATAAGAATGATATGGAACTGTTATCTTTGGAGTGGTCAAATCAACATAATAGGATTAATGAGCGAATTCTTGATACAGTTGTTCCTTACAAACGTATTAGGCATTTAAGAATTTCTGGTTATAAGGGTGTTTTGCCTCCACTGTGGATTCGAAGGAAAGTCCTTACCAAATTGGTACGCTTGAAGATTGTTGGATGTCCTAAATGGGATGATCTCCCTTCCTTCGCGAGTCTATCTAGTCTGAAGCATGTCTTACTGGAGGACCTACCAAATCTGAAATGCATTGGGGGACCTGATGGTGATGGATTGCCTCCTTTCTTGGTTACCTTAGTTGTAAAAGAATGCCTAGAACTGTTGAATTTACCTCATCTACCTTATAGTCTAAAGCATCTGGGGATAAATAAAGTTGGAATATCTTGTCTGCCAACCAGTAGTCAGATGGCATTACAAAACGTGTCTACAGTGGATCCACAGCTGTGCAGTCTCCATGTAGATTCTTGTCCTAATTTGTTGTCCTTCGGATCATGTATTGTAGAAGAGCAACACTACAAAGCTCTTACTAGCTTGAAAGTCATCGGCTGCAGCATGCTCGAGAAGCTCCCAAGTGAAGAACATTTTAGAAGAATATCCACAATGGAGAGTATTGAAATTCTTCAATGTCAGAGTTTGTCGACCTTGGGTGGCCTAGGAGCACTTGCTTCCTTGAAAATACTGAAAATACAGCAGTGCACTCATCTAACTGCTACATCTTCAGGGATTCCGGTAGCACCAGCTATGCGGTCTTCTCTTGTGCTTGACACCCTTGAAATTGATGACCATCTTTTGCTTCTTCAGAATCCATTTAGAAACTTCTGCCTCACTAGAAGACTTGTATCTAATGGATCTGAAATGCTTGAGTTGCCTCAGGAATGGTTATTGCAGAATAGTTCTCAGTTGGAGCATATAGAAATAAACAATGCAAATCTGCTCAGATCACTGCCTTCAACTATGGACACTTTGCACTCCCTGAGGAGTCTGGTTCTGTGTAATGCTCCCCTCCTCGAGACACTTCCTGCTATGCCCCCCAATCTGTGGGCTCTTCAAATAAGTGGTTGTTGCACTCGTTTAAAGGTGGGGTGTAAAACCAATGGTTCTGAATGGGAGAAGATTTTGCCAATCCATAAAGTTGATATAAACTAA
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| Protein seq | MVEAAAIAFAKSSAIFVGKKVAETVISYVVNKALDRLPLENEDLKTKLKSKLSKTQAMLYGITLQEIQDNQGLVEWLWQFRDAIQEAEDALDELDFFDLEKVCNRKAESSSSLVPKFMRLQLSVSSNNSNSSRKNLKNALMRLESVFDDAANFRVVTGHGLHTSPQRNEGRIQDTTNRNETTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSKLSVCAIVGGGGMGKTSLAQLVCQDKKVQDHFGDMIIWVHVPKRFEPVVLVARMLESINRNRVTASSLDILQLDLTKELVTKRFLLVLDDAWEDGENELWGQFLSPLRNIIAPMGGRILLTTRMGSVADAVKRQMPSNEYKCVVLGGLDHRDIMQILNHHVPPNEDLELRSVAEWIVHNLEGCPFVAKVIGQYLRDNTDHSNWNDFLNKKVCHLDDIAPRVMEMLRLSYEDLTSEVQLCFQYCSIFPSHYKFRMEELTEMWVSSGLILQSTKGNSGQEKIAREHFNILLKKSFFSLIPRELHPDPSTDYYVMHDLIYELSCLVSSEEFSTFKVTKCNTADVSERVRHLYIEGINSEAINVISKSKYLRTLIIANEEWPLKAGLADNLKKAMKGITSLRLLKFDGHGWFDINDAIAELKHLRYICMSATNKSNLNKLFKLFHLEVLKLLKIEGEEQASVSDLCNLANLQKLYLPKPALSRVPHIGRLTNLRELNGLSVKKEEGHKISELKDLKNLRKVFVFDVENVSNCSEASLAELSNKNDMELLSLEWSNQHNRINERILDTVVPYKRIRHLRISGYKGVLPPLWIRRKVLTKLVRLKIVGCPKWDDLPSFASLSSLKHVLLEDLPNLKCIGGPDGDGLPPFLVTLVVKECLELLNLPHLPYSLKHLGINKVGISCLPTSSQMALQNVSTVDPQLCSLHVDSCPNLLSFGSCIVEEQHYKALTSLKVIGCSMLEKLPSEEHFRRISTMESIEILQCQSLSTLGGLGALASLKILKIQQCTHLTATSSGIPVAPAMRSSLVLDTLEIDDHLLLLQNPFRNFCLTRRLVSNGSEMLELPQEWLLQNSSQLEHIEINNANLLRSLPSTMDTLHSLRSLVLCNAPLLETLPAMPPNLWALQISGCCTRLKVGCKTNGSEWEKILPIHKVDIN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.293558 | 0.069014 | 0.041922 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0511900 | RBH | 0.391469 | 0.109379 | 0.173597 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g32790 | RBH | 0.000000 | 0.000000 | 0.042610 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0511900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0014960 | RBH | 0.0 | 5.793593 | 0.262648 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0015130 | SBH | 0.071465 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0015000 | RBH | 0.174027 | 6.763737 | 0.274198 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0014840 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0014330 | SBH | 1.816516 | 3.163459 | 3.415550 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0265000 | RBH | 0.7852 | 15.0217285 | 0.987307 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0014540 | SBH | 0.075205 | 0.238336 | 0.238006 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0294700 | RBH | 0.738621 | 13.4305935 | 3.6193225 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0014710 | RBH | 0.0 | 0.133747 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0014900 | RBH | 0.150412 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0014860 | RBH | 0.648247 | 5.926068 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0014750 | SBH | 0.111274 | 0.0 | 0.175978 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0014920 | RBH | 0.000000 | 3.252288 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G014820 | RBH | 0.0 | 0.000000 | 0.439404 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0014600 | RBH | 0.000000 | 1.087796 | 0.067310 |
