Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g47240 | OGI:11082600 | 4/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:28407554-28411173 | ||||||||
| Gene Symbol | EXS, OsEXS | ||||||||||
| DNA seq | GGTACCGCCTCCACCTGCTGGACGGTAAAAATTCTCTTCATTTATATGTCGATACAGTACTTTAGGCTCGAATGAGTCTTACTTGAGAATAATTGTGGCTAGTAGCTAGTGAGATAGTGTCCACATATAATAGATAAACAAAATGCACTCAAATGCTAATTTTATATTGCTCCTGTAAAAGAGAAATAATCCTTCCTGATGCTCTTGAGCTTCACGACCACATCACTTATTCCCATCCGTTCTGCAGGTGAGCTACTGCAACACATCAAGCCAAGCTCGAAAATTGGCAAAAGAAGGCCTTCATTTGGCCAGGTAGCAGAACGCGGCAAGGAGGTAGCATTGTTCTGACGAACACCTTGTTCTATTAATGTTTCAGCCTGTAGAAGCCTACCATCCACAATATCTGCGAGCCTGGCTGGAAATGCTTCAGAAACCCACTTCCTAAGGCTCATGTCACCAACAAACATGGCATCCGTAGGCCTCTTCCCGGTGAAGACTTCGAGCAACATGATCCCATAGCTGAACACATCGCTCTTTCGTGATGCTTTTCCCATAAATGCATATTCTGTTCAATGAATGATTTTTAAAAGAAAGAAAGAGATAAACTAAATTAAGTCTCTTACATAACTCAAATGGTAAAGCAAAATTCTCATGAATAGTAAGTGCAAGTACCTGGAGCCATGTATCCTATTGTCCCGGGCATGCTGGCTGAAACTGCAGAGTTGTCATCACCTAACAGTAATTTTGCAATGCCAAAGTCCGCCACATGTGCCGTGATTTCCTCATCAAACAGCACATTGCTAGGCTTGAGGTCACAGTGCAAAACAACTTCAGAATGATGATAGTGAAGGTGCTCCATTGCCATTGATACGTCCAGCATAATGTCAAGTCTCTTTAGGAATCCTAGTGGAGGGTGCCCTTGCTTGTGCAGGTATGTCTCCAAGCTGCCATTGGGCATGTACTGAAGCAGCAGTGCTCTGAAGTCTGTGTTGGAGCATATGTTTAGTATCCTTATCAAGTTGCGATGCTGAACCATGCGTAGAACCTGGCACTCAACATCAAAGCTTCTCATAGCTTGTTCTACCTGCATGTTTAGAACTTTAACCGCAACCACCATTCCATCATCCAAATGACCCTTGTAAACCTTGCCAAAACTTCCAGCTCCCAACATATTATCCTCATTGAAACTTTCCGTGGCACGAACAATCTCTTGATATGATACTAACCTATAAGAAGTAGGTGTAGTAGTATCTAGCTTCCTTTTAATCTTCTTTCTAGTCATTTGGTACAAACAAAGAGCAAGTGCGCCAACTGCTATTGTGATGGCAGGGAGTATAAACTTCAGGTAGTGGCTACCATTAGTTGAGTGTGACTTGTCTAGGCATGGTAAAAATCCTAGACGAGGAAGACCACACAAGGCAGCATTGCCCATCAAAGATATCAAGGTTATATTTGAGAAAACACCACCATTTGGTATTTCGCCTTTTAGGTTGTTAGAAGAGAGGTTCAGAGTAGTGAGGTAGGTAAAGTTTGCTAAGTACTTAGGTATAGTGCCTGAAAGATTGTTATAAGAAAGGTCCAATACTTCTAAGCTGGTCAGATGGCTAATAGAGTTCGGGATTGAATCTGTGAATGAGTTGTGAGACAGGTTTAGGTAGGCTAACATCTGATGGTATCCAAATGAATTTGGGAGCTGACCAACTAATAAATTGTCTGAAGTATCTAGGGCAAACATATCTTGGATGTGGCTGAGATCAGATGGTAATGTACCATTGAGGTTATTATTGGAGAGAAAGAGCTGCACGATACCAAGATAAAATAAACTTGTTGGGATAGTCGATGACAACTTGTTATCAGATAGAGAAATGTATTGTAGCATGGTGAGATTACCAATGCTATCAGGTATGGAACCTGAGAGCTTATTATCGGTCAGGTACAACCATACAAATCTTGCCGTACCAATCTCTTCAGTGATAGGACCAGATATTCCATTCGAGGTAAGATCAAGTCCCTGCAAATTCTCCAACTTCATGAGGGAAGCTGGTATGGAATCACTGAGTTGGTTGTATGACAAATTTAGCGCTCGCAGATTAGTAAGGTTTGACAGTGTAGCTGGAAGGCCACCAGTTAAGTGGTTGTCGTCTCCTTCGAATCCTAAGAGTTCAGTTGAGAGGTTTCCAACATAGTTTGGGAGAGACCCGGTGAAAGAGTTATGTGATATCAAGAGGTACTGAAGTTGGCGACAGTTACAAAGGCTAGACAGGAAGCTGAGATCCCCTTGGAGGTGATTGCCTCCAATTTTAATTTCAACGAGAGGCCTGATGTTTCCAAACGTTGATGGTACAGGCCCTGTCAGCTGGTTATATCCCAATCCCAAGAATGTCAATTCAGAGAAGTTTCCAACAAAAGCTGGAAAGGCGCCGTTGAGCTGGTTAAATGAAAGATCGAGATACGTAAGTTTTGTCAGTGTTCCCAGCTCCACCGGAATGTGGCCGCTTAGGTTGGAGTCTGAGAGGTCAAGCTCACTGAGCATGGGGAGATTTCCCAACAGACTCGGGATTGTACCAACGAGCTCATTGCCATCCAAAAAGAGTAAAGTGAGACGTGACATCTTAGCCAGCCATGGCGGCACGACACCTGAAAAAAGATTTTCTGACAGAGAAATTGTCTCAAGATTCTGGCATGAAGCAAGCCCTGACGGGATTAGTCCTGTGAATTTATTCGTGTCTAGTTCTATGTCTTGCAACATAGGGAGATTAAAGCTCCGGTTAGTAGGTATAGGGCCAGTCAGATTGTTCTTCCATATAAGTATGGCTTCAAGGCTAGACATGTTGAAAATGGCAGGAGGCACTGGACCAGAGAGCTGATTGTCTGGCAACGCAAGAACACGAAGCATGGGCAAGGAGCCAACACAGTCTGGTATGGAACCTGACAAACTATTCAGCCCGAGGTGTATCTCGGTTACCCAAGGTGTGTGGCGTTGAATAGATACTCTGGTACCGGACCACTCAGGTAATTGCTCGTGAGAACCATTTGCCTAAGGCTATGTAGATTTTGCAGCTCGGCTGGTATGTGCCCTGAGATGTGGTTGCCATAGAGATTTAGAATCTCAAGCTTTGTAAGGTTCCCTAGTGCAGAGGGAATAGTATCTGACATAGTATTGTGGGCAAGACGGAGAATCCTAAGACGATGCAGCCTCCCAAGATCAGCTGGGATGGGGCCAGTGAGGTTTATGCCACCGAGGTTGAGGACACGGAGGAAAGAGAGGTTACCGAGGTGAGGCGTGAGCTCTCCTTGCAGAGGAACGTCCCACAGCTTCAACCCGACGACCCGCGGCCGCCGCCGGCTGCACGACACGCCGACCCAGCGGCACATGGACACCTTGGTTGTCCAGTTGCCGGCAAGGACTCCGAGAGGATCGGACAGCCGCGCTTTGAAAGCCAGCAGCGCGGACAGGTCGTCGCCGGTGCCATTGCTGCTGCTACCACCGTCACGCGGGATGGAACCAGAAGCATATGGTATGGTAAGTGGCAGTACAAGCATGAGAAGACGAATGCTGTTGAATGGTGGAAGAAGTAGCCAGGCCATGTTAGGCACTACATACAGTGTGTTCGTGATGT
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| CDS seq | ATGGCCTGGCTACTTCTTCCACCATTCAACAGCATTCGTCTTCTCATGCTTGTACTGCCACTTACCATACCATATGCTTCTGGTTCCATCCCGCGTGACGGTGGTAGCAGCAGCAATGGCACCGGCGACGACCTGTCCGCGCTGCTGGCTTTCAAAGCGCGGCTGTCCGATCCTCTCGGAGTCCTTGCCGGCAACTGGACAACCAAGGTGTCCATGTGCCGCTGGGTCGGCGTGTCGTGCAGCCGGCGGCGGCCGCGGGTCGTCGGGTTGAAGCTGTGGGACGTTCCTCTGCAAGGAGAGCTCACGCCTCACCTCGGTAACCTCTCTTTCCTCCGTGTCCTCAACCTCGGTGGCATAAACCTCACTGGCCCCATCCCAGCTGATCTTGGGAGGCTGCATCGTCTTAGGATTCTCCGTCTTGCCCACAATACTATGTCAGATACTATTCCCTCTGCACTAGGGAACCTTACAAAGCTTGAGATTCTAAATCTCTATGGCAACCACATCTCAGGGCACATACCAGCCGAGCTGCAAAATCTACATAGCCTTAGGCAAATGGTTCTCACGAGCAATTACCTGAGTGACAATCAGCTCTCTGGTCCAGTGCCTCCTGCCATTTTCAACATGTCTAGCCTTGAAGCCATACTTATATGGAAGAACAATCTGACTGGCCCTATACCTACTAACCGGAGCTTTAATCTCCCTATGTTGCAAGACATAGAACTAGACACGAATAAATTCACAGGACTAATCCCGTCAGGGCTTGCTTCATGCCAGAATCTTGAGACAATTTCTCTGTCAGAAAATCTTTTTTCAGGTGTCGTGCCGCCATGGCTGGCTAAGATGTCACGTCTCACTTTACTCTTTTTGGATGGCAATGAGCTCGTTGGTACAATCCCGAGTCTGTTGGGAAATCTCCCCATGCTCAGTGAGCTTGACCTCTCAGACTCCAACCTAAGCGGCCACATTCCGGTGGAGCTGGGAACACTGACAAAACTTACGTATCTCGATCTTTCATTTAACCAGCTCAACGGCGCCTTTCCAGCTTTTGTTGGAAACTTCTCTGAATTGACATTCTTGGGATTGGGATATAACCAGCTGACAGGGCCTGTACCATCAACGTTTGGAAACATCAGGCCTCTCGTTGAAATTAAAATTGGAGGCAATCACCTCCAAGGGGATCTCAGCTTCCTGTCTAGCCTTTGTAACTGTCGCCAACTTCAGTACCTCTTGATATCACATAACTCTTTCACCGGGTCTCTCCCAAACTATGTTGGAAACCTCTCAACTGAACTCTTAGGATTCGAAGGAGACGACAACCACTTAACTGGTGGCCTTCCAGCTACACTGTCAAACCTTACTAATCTGCGAGCGCTAAATTTGTCATACAACCAACTCAGTGATTCCATACCAGCTTCCCTCATGAAGTTGGAGAATTTGCAGGGACTTGATCTTACCTCGAATGGAATATCTGGTCCTATCACTGAAGAGATTGGTACGGCAAGATTTGTATGGTTGTACCTGACCGATAATAAGCTCTCAGGTTCCATACCTGATAGCATTGGTAATCTCACCATGCTACAATACATTTCTCTATCTGATAACAAGTTGTCATCGACTATCCCAACAAGTTTATTTTATCTTGGTATCGTGCAGCTCTTTCTCTCCAATAATAACCTCAATGGTACATTACCATCTGATCTCAGCCACATCCAAGATATGTTTGCCCTAGATACTTCAGACAATTTATTAGTTGGTCAGCTCCCAAATTCATTTGGATACCATCAGATGTTAGCCTACCTAAACCTGTCTCACAACTCATTCACAGATTCAATCCCGAACTCTATTAGCCATCTGACCAGCTTAGAAGTATTGGACCTTTCTTATAACAATCTTTCAGGCACTATACCTAAGTACTTAGCAAACTTTACCTACCTCACTACTCTGAACCTCTCTTCTAACAACCTAAAAGGCGAAATACCAAATGGTGGTGTTTTCTCAAATATAACCTTGATATCTTTGATGGGCAATGCTGCCTTGTGTGGTCTTCCTCGTCTAGGATTTTTACCATGCCTAGACAAGTCACACTCAACTAATGGTAGCCACTACCTGAAGTTTATACTCCCTGCCATCACAATAGCAGTTGGCGCACTTGCTCTTTGTTTGTACCAAATGACTAGAAAGAAGATTAAAAGGAAGCTAGATACTACTACACCTACTTCTTATAGGTTAGTATCATATCAAGAGATTGTTCGTGCCACGGAAAGTTTCAATGAGGATAATATGTTGGGAGCTGGAAGTTTTGGCAAGGTTTACAAGGGTCATTTGGATGATGGAATGGTGGTTGCGGTTAAAGTTCTAAACATGCAGGTAGAACAAGCTATGAGAAGCTTTGATGTTGAGTGCCAGGTTCTACGCATGGTTCAGCATCGCAACTTGATAAGGATACTAAACATATGCTCCAACACAGACTTCAGAGCACTGCTGCTTCAGTACATGCCCAATGGCAGCTTGGAGACATACCTGCACAAGCAAGGGCACCCTCCACTAGGATTCCTAAAGAGACTTGACATTATGCTGGACGTATCAATGGCAATGGAGCACCTTCACTATCATCATTCTGAAGTTGTTTTGCACTGTGACCTCAAGCCTAGCAATGTGCTGTTTGATGAGGAAATCACGGCACATGTGGCGGACTTTGGCATTGCAAAATTACTGTTAGGTGATGACAACTCTGCAGTTTCAGCCAGCATGCCCGGGACAATAGGATACATGGCTCCAGAATATGCATTTATGGGAAAAGCATCACGAAAGAGCGATGTGTTCAGCTATGGGATCATGTTGCTCGAAGTCTTCACCGGGAAGAGGCCTACGGATGCCATGTTTGTTGGTGACATGAGCCTTAGGAAGTGGGTTTCTGAAGCATTTCCAGCCAGGCTCGCAGATATTGTGGATGGTAGGCTTCTACAGGCTGAAACATTAATAGAACAAGGTGTTCGTCAGAACAATGCTACCTCCTTGCCGCGTTCTGCTACCTGGCCAAATGAAGGCCTTCTTTTGCCAATTTTCGAGCTTGGCTTGATGTGTTGCAGTAGCTCACCTGCAGAACGGATGGGAATAAGTGATGTGGTCGTGAAGCTCAAGAGCATCAGGAAGGATTATTTCTCTTTTACAGGAGCAATATAA
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| Protein seq | MAWLLLPPFNSIRLLMLVLPLTIPYASGSIPRDGGSSSNGTGDDLSALLAFKARLSDPLGVLAGNWTTKVSMCRWVGVSCSRRRPRVVGLKLWDVPLQGELTPHLGNLSFLRVLNLGGINLTGPIPADLGRLHRLRILRLAHNTMSDTIPSALGNLTKLEILNLYGNHISGHIPAELQNLHSLRQMVLTSNYLSDNQLSGPVPPAIFNMSSLEAILIWKNNLTGPIPTNRSFNLPMLQDIELDTNKFTGLIPSGLASCQNLETISLSENLFSGVVPPWLAKMSRLTLLFLDGNELVGTIPSLLGNLPMLSELDLSDSNLSGHIPVELGTLTKLTYLDLSFNQLNGAFPAFVGNFSELTFLGLGYNQLTGPVPSTFGNIRPLVEIKIGGNHLQGDLSFLSSLCNCRQLQYLLISHNSFTGSLPNYVGNLSTELLGFEGDDNHLTGGLPATLSNLTNLRALNLSYNQLSDSIPASLMKLENLQGLDLTSNGISGPITEEIGTARFVWLYLTDNKLSGSIPDSIGNLTMLQYISLSDNKLSSTIPTSLFYLGIVQLFLSNNNLNGTLPSDLSHIQDMFALDTSDNLLVGQLPNSFGYHQMLAYLNLSHNSFTDSIPNSISHLTSLEVLDLSYNNLSGTIPKYLANFTYLTTLNLSSNNLKGEIPNGGVFSNITLISLMGNAALCGLPRLGFLPCLDKSHSTNGSHYLKFILPAITIAVGALALCLYQMTRKKIKRKLDTTTPTSYRLVSYQEIVRATESFNEDNMLGAGSFGKVYKGHLDDGMVVAVKVLNMQVEQAMRSFDVECQVLRMVQHRNLIRILNICSNTDFRALLLQYMPNGSLETYLHKQGHPPLGFLKRLDIMLDVSMAMEHLHYHHSEVVLHCDLKPSNVLFDEEITAHVADFGIAKLLLGDDNSAVSASMPGTIGYMAPEYAFMGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGDMSLRKWVSEAFPARLADIVDGRLLQAETLIEQGVRQNNATSLPRSATWPNEGLLLPIFELGLMCCSSSPAERMGISDVVVKLKSIRKDYFSFTGAI |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g47240 | LOC_Os11g47240.1 | Chr11 | 28407554 | 28411141 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCCTGGCTACTTCTTCCACCATTCAACAGCATTCGTCTTCTCATGCTTGTACTGCCACTTACCATACCATATGCTTCTGGTTCCATCCCGCGTGACGGTGGTAGCAGCAGCAATGGCACCGGCGACGACCTGTCCGCGCTGCTGGCTTTCAAAGCGCGGCTGTCCGATCCTCTCGGAGTCCTTGCCGGCAACTGGACAACCAAGGTGTCCATGTGCCGCTGGGTCGGCGTGTCGTGCAGCCGGCGGCGGCCGCGGGTCGTCGGGTTGAAGCTGTGGGACGTTCCTCTGCAAGGAGAGCTCACGCCTCACCTCGGTAACCTCTCTTTCCTCCGTGTCCTCAACCTCGGTGGCATAAACCTCACTGGCCCCATCCCAGCTGATCTTGGGAGGCTGCATCGTCTTAGGATTCTCCGTCTTGCCCACAATACTATGTCAGATACTATTCCCTCTGCACTAGGGAACCTTACAAAGCTTGAGATTCTAAATCTCTATGGCAACCACATCTCAGGGCACATACCAGCCGAGCTGCAAAATCTACATAGCCTTAGGCAAATGGTTCTCACGAGCAATTACCTGAGTGACAATCAGCTCTCTGGTCCAGTGCCTCCTGCCATTTTCAACATGTCTAGCCTTGAAGCCATACTTATATGGAAGAACAATCTGACTGGCCCTATACCTACTAACCGGAGCTTTAATCTCCCTATGTTGCAAGACATAGAACTAGACACGAATAAATTCACAGGACTAATCCCGTCAGGGCTTGCTTCATGCCAGAATCTTGAGACAATTTCTCTGTCAGAAAATCTTTTTTCAGGTGTCGTGCCGCCATGGCTGGCTAAGATGTCACGTCTCACTTTACTCTTTTTGGATGGCAATGAGCTCGTTGGTACAATCCCGAGTCTGTTGGGAAATCTCCCCATGCTCAGTGAGCTTGACCTCTCAGACTCCAACCTAAGCGGCCACATTCCGGTGGAGCTGGGAACACTGACAAAACTTACGTATCTCGATCTTTCATTTAACCAGCTCAACGGCGCCTTTCCAGCTTTTGTTGGAAACTTCTCTGAATTGACATTCTTGGGATTGGGATATAACCAGCTGACAGGGCCTGTACCATCAACGTTTGGAAACATCAGGCCTCTCGTTGAAATTAAAATTGGAGGCAATCACCTCCAAGGGGATCTCAGCTTCCTGTCTAGCCTTTGTAACTGTCGCCAACTTCAGTACCTCTTGATATCACATAACTCTTTCACCGGGTCTCTCCCAAACTATGTTGGAAACCTCTCAACTGAACTCTTAGGATTCGAAGGAGACGACAACCACTTAACTGGTGGCCTTCCAGCTACACTGTCAAACCTTACTAATCTGCGAGCGCTAAATTTGTCATACAACCAACTCAGTGATTCCATACCAGCTTCCCTCATGAAGTTGGAGAATTTGCAGGGACTTGATCTTACCTCGAATGGAATATCTGGTCCTATCACTGAAGAGATTGGTACGGCAAGATTTGTATGGTTGTACCTGACCGATAATAAGCTCTCAGGTTCCATACCTGATAGCATTGGTAATCTCACCATGCTACAATACATTTCTCTATCTGATAACAAGTTGTCATCGACTATCCCAACAAGTTTATTTTATCTTGGTATCGTGCAGCTCTTTCTCTCCAATAATAACCTCAATGGTACATTACCATCTGATCTCAGCCACATCCAAGATATGTTTGCCCTAGATACTTCAGACAATTTATTAGTTGGTCAGCTCCCAAATTCATTTGGATACCATCAGATGTTAGCCTACCTAAACCTGTCTCACAACTCATTCACAGATTCAATCCCGAACTCTATTAGCCATCTGACCAGCTTAGAAGTATTGGACCTTTCTTATAACAATCTTTCAGGCACTATACCTAAGTACTTAGCAAACTTTACCTACCTCACTACTCTGAACCTCTCTTCTAACAACCTAAAAGGCGAAATACCAAATGGTGGTGTTTTCTCAAATATAACCTTGATATCTTTGATGGGCAATGCTGCCTTGTGTGGTCTTCCTCGTCTAGGATTTTTACCATGCCTAGACAAGTCACACTCAACTAATGGTAGCCACTACCTGAAGTTTATACTCCCTGCCATCACAATAGCAGTTGGCGCACTTGCTCTTTGTTTGTACCAAATGACTAGAAAGAAGATTAAAAGGAAGCTAGATACTACTACACCTACTTCTTATAGGTTAGTATCATATCAAGAGATTGTTCGTGCCACGGAAAGTTTCAATGAGGATAATATGTTGGGAGCTGGAAGTTTTGGCAAGGTTTACAAGGGTCATTTGGATGATGGAATGGTGGTTGCGGTTAAAGTTCTAAACATGCAGGTAGAACAAGCTATGAGAAGCTTTGATGTTGAGTGCCAGGTTCTACGCATGGTTCAGCATCGCAACTTGATAAGGATACTAAACATATGCTCCAACACAGACTTCAGAGCACTGCTGCTTCAGTACATGCCCAATGGCAGCTTGGAGACATACCTGCACAAGCAAGGGCACCCTCCACTAGGATTCCTAAAGAGACTTGACATTATGCTGGACGTATCAATGGCAATGGAGCACCTTCACTATCATCATTCTGAAGTTGTTTTGCACTGTGACCTCAAGCCTAGCAATGTGCTGTTTGATGAGGAAATCACGGCACATGTGGCGGACTTTGGCATTGCAAAATTACTGTTAGGTGATGACAACTCTGCAGTTTCAGCCAGCATGCCCGGGACAATAGGATACATGGCTCCAGAATATGCATTTATGGGAAAAGCATCACGAAAGAGCGATGTGTTCAGCTATGGGATCATGTTGCTCGAAGTCTTCACCGGGAAGAGGCCTACGGATGCCATGTTTGTTGGTGACATGAGCCTTAGGAAGTGGGTTTCTGAAGCATTTCCAGCCAGGCTCGCAGATATTGTGGATGGTAGGCTTCTACAGGCTGAAACATTAATAGAACAAGGTGTTCGTCAGAACAATGCTACCTCCTTGCCGCGTTCTGCTACCTGGCCAAATGAAGGCCTTCTTTTGCCAATTTTCGAGCTTGGCTTGATGTGTTGCAGTAGCTCACCTGCAGAACGGATGGGAATAAGTGATGTGGTCGTGAAGCTCAAGAGCATCAGGAAGGATTATTTCTCTTTTACAGGAGCAATATAA
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| Protein seq | MAWLLLPPFNSIRLLMLVLPLTIPYASGSIPRDGGSSSNGTGDDLSALLAFKARLSDPLGVLAGNWTTKVSMCRWVGVSCSRRRPRVVGLKLWDVPLQGELTPHLGNLSFLRVLNLGGINLTGPIPADLGRLHRLRILRLAHNTMSDTIPSALGNLTKLEILNLYGNHISGHIPAELQNLHSLRQMVLTSNYLSDNQLSGPVPPAIFNMSSLEAILIWKNNLTGPIPTNRSFNLPMLQDIELDTNKFTGLIPSGLASCQNLETISLSENLFSGVVPPWLAKMSRLTLLFLDGNELVGTIPSLLGNLPMLSELDLSDSNLSGHIPVELGTLTKLTYLDLSFNQLNGAFPAFVGNFSELTFLGLGYNQLTGPVPSTFGNIRPLVEIKIGGNHLQGDLSFLSSLCNCRQLQYLLISHNSFTGSLPNYVGNLSTELLGFEGDDNHLTGGLPATLSNLTNLRALNLSYNQLSDSIPASLMKLENLQGLDLTSNGISGPITEEIGTARFVWLYLTDNKLSGSIPDSIGNLTMLQYISLSDNKLSSTIPTSLFYLGIVQLFLSNNNLNGTLPSDLSHIQDMFALDTSDNLLVGQLPNSFGYHQMLAYLNLSHNSFTDSIPNSISHLTSLEVLDLSYNNLSGTIPKYLANFTYLTTLNLSSNNLKGEIPNGGVFSNITLISLMGNAALCGLPRLGFLPCLDKSHSTNGSHYLKFILPAITIAVGALALCLYQMTRKKIKRKLDTTTPTSYRLVSYQEIVRATESFNEDNMLGAGSFGKVYKGHLDDGMVVAVKVLNMQVEQAMRSFDVECQVLRMVQHRNLIRILNICSNTDFRALLLQYMPNGSLETYLHKQGHPPLGFLKRLDIMLDVSMAMEHLHYHHSEVVLHCDLKPSNVLFDEEITAHVADFGIAKLLLGDDNSAVSASMPGTIGYMAPEYAFMGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGDMSLRKWVSEAFPARLADIVDGRLLQAETLIEQGVRQNNATSLPRSATWPNEGLLLPIFELGLMCCSSSPAERMGISDVVVKLKSIRKDYFSFTGAI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g47240 | LOC_Os11g47240.2 | Chr11 | 28407554 | 28411173 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCCTGGCTACTTCTTCCACCATTCAACAGCATTCGTCTTCTCATGCTTGTACTGCCACTTACCATACCATATGCTTCTGGTTCCATCCCGCGTGACGGTGGTAGCAGCAGCAATGGCACCGGCGACGACCTGTCCGCGCTGCTGGCTTTCAAAGCGCGGCTGTCCGATCCTCTCGGAGTCCTTGCCGGCAACTGGACAACCAAGGTGTCCATGTGCCGCTGGGTCGGCGTGTCGTGCAGCCGGCGGCGGCCGCGGGTCGTCGGGTTGAAGCTGTGGGACGTTCCTCTGCAAGGAGAGCTCACGCCTCACCTCGACTTCAGAGCACTGCTGCTTCAGTACATGCCCAATGGCAGCTTGGAGACATACCTGCACAAGCAAGGGCACCCTCCACTAGGATTCCTAAAGAGACTTGACATTATGCTGGACGTATCAATGGCAATGGAGCACCTTCACTATCATCATTCTGAAGTTGTTTTGCACTGTGACCTCAAGCCTAGCAATGTGCTGTTTGATGAGGAAATCACGGCACATGTGGCGGACTTTGGCATTGCAAAATTACTGTTAGGTGATGACAACTCTGCAGTTTCAGCCAGCATGCCCGGGACAATAGGATACATGGCTCCAGAATATGCATTTATGGGAAAAGCATCACGAAAGAGCGATGTGTTCAGCTATGGGATCATGTTGCTCGAAGTCTTCACCGGGAAGAGGCCTACGGATGCCATGTTTGTTGGTGACATGAGCCTTAGGAAGTGGGTTTCTGAAGCATTTCCAGCCAGGCTCGCAGATATTGTGGATGGTAGGCTTCTACAGGCTGAAACATTAATAGAACAAGGTGTTCGTCAGAACAATGCTACCTCCTTGCCGCGTTCTGCTACCTGGCCAAATGAAGGCCTTCTTTTGCCAATTTTCGAGCTTGGCTTGATGTGTTGCAGTAGCTCACCTGCAGAACGGATGGGAATAAGTGATGTGGTCGTGAAGCTCAAGAGCATCAGGAAGGATTATTTCTCTTTTACAGGAGCAATATAA
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| Protein seq | MAWLLLPPFNSIRLLMLVLPLTIPYASGSIPRDGGSSSNGTGDDLSALLAFKARLSDPLGVLAGNWTTKVSMCRWVGVSCSRRRPRVVGLKLWDVPLQGELTPHLDFRALLLQYMPNGSLETYLHKQGHPPLGFLKRLDIMLDVSMAMEHLHYHHSEVVLHCDLKPSNVLFDEEITAHVADFGIAKLLLGDDNSAVSASMPGTIGYMAPEYAFMGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGDMSLRKWVSEAFPARLADIVDGRLLQAETLIEQGVRQNNATSLPRSATWPNEGLLLPIFELGLMCCSSSPAERMGISDVVVKLKSIRKDYFSFTGAI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.891019 | 2.061177 | 0.204926 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0695000 | SBH | 2.569778 | 3.126565 | 0.351838 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g47030 | RBH | 0.223026 | 0.303292 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0692500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024590 | SBH | 0.0 | 5.368335 | 1.046873 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024610 | SBH | 0.0 | 1.959447 | 0.097477 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024070 | SBH | 1.097748 | 1.267132 | 6.301254 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0024080 | RBH | 0.395625 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024390 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0444200 | SBH | 0.024749 | 0.065174 | 0.025844 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024800 | SBH | 0.009890 | 0.000000 | 0.012598 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0442600 | RBH | 5.837476 | 0 | 0.020078 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024700 | RBH | 1.691817 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024760 | SBH | 0.027641 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024090 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023910 | SBH | 0.018860 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024350 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024300 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024500 | SBH | 0.0 | 0.0 | 0.0 |
