Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os11g46970		OGI:11010520 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr11:28228913-28232303		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		RLCK354, OsRLCK354, EXS, OsEXS
DNA seq		ATGGCGCTTGGATTGCTGGTATGGATATACATTGTGCTGTTGATTGCTCTGTCCACTGTGAGTGCTGCTTCTCCACCAGGTCCGAGCAAGAGCAACGGCAGCGAAACCGACCTTGCTGCACTGCTGGCTTTCAAAGCGCAGCTGAGTGATCCTCTCAGCATCCTTGGCAGCAATTGGACAGTCGGCACGCCATTCTGCCGATGGGTGGGTGTTTCTTGCAGCCACCACCGGCAGTGCGTCACTGCCCTAGATTTGCGGGACACTCCTTTGCTAGGAGAGCTCAGCCCTCAACTCGGTAACCTCTCTTTCCTCTCTATCCTCAACCTCACCAACACCGGCCTCACGGGGTCACTCCCGGATGATATAGGAAGGCTTCATCGCCTCGAGATACTTGAGCTTGGCTATAACACTCTGTCAGGTAGAATCCCAGCTACCATAGGGAACCTCACGAGGCTTCAAGTTCTTGATCTCCAGTTTAACAGTCTATCTGGTCCAATCCCAGCAGATCTGCAGAACCTGCAGAACCTTAGTAGTATTAATCTCCGTAGGAACTACCTCATTGGCTTGATACCAAACAATCTATTCAACAATACACATTTGCTAACTTATCTCAACATTGGTAACAACAGCCTGTCCGGACCAATACCTGGTTGCATTGGCTCCTTGCCAATACTACAGACTCTCGTCCTGCAAGTCAATAATCTCACAGGCCCAGTTCCACCAGCCATCTTTAACATGTCTACGCTGCGTGCTTTAGCTCTTGGCTTGAACGGCTTAACTGGTCCTCTCCCTGGCAACGCAAGTTTCAACCTCCCAGCTCTGCAATGGTTCTCCATCACTAGAAATGATTTCACTGGTCCAATTCCAGTAGGGCTTGCAGCATGCCAGTACCTCCAAGTTCTTGGCCTGCCTAATAATTTATTCCAAGGTGCTTTCCCACCATGGCTGGGCAAACTGACGAATCTCAATATCGTCTCCTTGGGAGGGAATAAACTTGATGCTGGTCCGATCCCTGCTGCACTTGGCAACCTCACCATGCTGAGTGTCCTAGATCTCGCATCATGCAACCTAACAGGACCCATACCGTTGGACATTCGACACCTAGGCCAACTTTCAGAGTTGCATCTTTCAATGAATCAACTAACAGGACCCATTCCTGCTTCTATTGGCAACCTTTCTGCATTATCATACCTGCTATTGATGGGAAACATGTTGGATGGATTAGTACCAGCAACAGTTGGTAACATGAACTCGCTAAGGGGATTAAATATTGCGGAAAACCACCTACAGGGGGATCTTGAATTCCTTTCTACTGTTTCCAACTGTAGAAAGCTCTCTTTCCTTCGAGTTGACTCTAATTATTTCACTGGAAACCTCCCAGACTATGTAGGTAACCTGTCAAGCACACTGCAGTCATTTGTTGTAGCTGGAAACAAGTTAGGTGGTGAAATTCCGTCTACCATTTCGAATTTAACTGGCCTCATGGTGCTAGCACTTTCGGATAATCAATTCCACAGTACAATACCAGAATCAATCATGGAAATGGTGAATCTCCGGTGGCTTGATCTCAGTGGAAATAGCCTGGCTGGCTCTGTCCCATCAAATGCCGGAATGCTAAAGAATGCTGAAAAGCTATTCCTTCAAAGCAACAAATTATCTGGCTCCATACCAAAGGACATGGGCAACCTCACCAAGTTAGAGCACCTAGTACTATCAAATAACCAATTATCATCAACTGTACCACCGAGCATATTTCATCTTTCTAGCCTTATCCAGTTAGACCTATCTCATAACTTTTTCAGTGATGTGTTGCCGGTTGATATAGGCAATATGAAGCAAATTAACAACATAGATCTCTCTACCAATCGCTTTACTGGTAGCATCCCAAATTCGATTGGGCAACTTCAAATGATATCCTACTTGAACCTATCTGTTAATTCATTCGATGATTCAATTCCAGATTCTTTTGGTGAGCTAACTAGCTTGCAGACTTTGGATCTATTCCATAATAATATTTCTGGTACCATCCCCAAGTATCTAGCCAATTTTACCATACTTATTAGCTTGAACTTGTCTTTCAACAATCTCCATGGTCAGATACCAAAAGGGGGTGTATTCTCAAATATCACATTGCAATCCTTGGTGGGGAATTCAGGGTTATGTGGTGTTGCACGTTTAGGACTTCCATCATGCCAAACAACCTCTTCCAAAAGAAATGGCCGCATGCTAAAATATCTGCTCCCTGCTATAACCATAGTAGTTGGAGCTTTTGCTTTCAGCCTATATGTAGTCATCCGAATGAAAGTTAAGAAGCATCAAAAGATTTCTTCTAGTATGGTTGACATGATCAGCAACAGATTACTCTCCTACCAAGAGCTCGTCCGTGCTACTGATAATTTCAGTTATGATAACATGTTGGGGGCTGGAAGCTTTGGAAAAGTTTATAAGGGTCAGCTGAGTAGCGGTTTGGTGGTTGCCATAAAAGTTATACACCAACATCTGGAACATGCCATGAGAAGCTTTGATACGGAGTGTCATGTGCTTCGAATGGCTAGACATCGGAACTTGATAAAGATATTGAACACTTGTAGCAACCTAGACTTCAGAGCACTTGTTCTTGAGTACATGCCCAATGGTAGCCTAGAGGCACTCCTGCACTCTGAAGGAAGAATGCAATTAGGTTTCCTTGAGAGGGTGGACATTATGCTAGATGTTTCAATGGCAATGGAATACCTGCATCATGAGCACCATGAAGTGGCCCTACACTGTGATTTGAAGCCTAGCAACGTGCTACTTGACGATGATGACTGCACATGTATCGGACTTTGGCATTGCAAGGTTATTGTTAGGTGATGACAGCTCCATGATCTCTGCGAGTATGCCGGGAACAGTTGGGTACATGGCACCAGGTACTAGCAGCTTCTGTACTCTTGCTCAAAGTAGTGGTATTTTCATAATTATCGTATGGTGCAATCAATAAGCATTGACCAATTTTATTCCTGCAGAATATGGTGCTCTTGGAAAAGCGTCACGAAAGAGCGATGTGTTCAGCTACGGGATCATGCTACTCGAAGTGTTCACTGGGAAAAGACCCACAGATGCTATGTTTGTGGGGGAACTGAACATAAGGCAGTGGGTTTACCAGGCGTTTCTGGTAGAGCTTGTCCATGTACTGGACACCCGACTTTTACAAGATTGCTCTTCTCCCAGTAGCTTGCATGGCTTCCTTGTGCCAGTGTTTGACCTGGGCTTGCTTTGCTCAGCTGACTCCCCGGAGCAAAGGATGGCGATGAATGATGTGGTTGTGACACTGAAGAAGATTAGGAAGGACTATGTCAAATCGATATCAACGACAGGAAGCGTGGCCTTGCCTGCATATACGAAAGAATGA More
CDS seq		ATGGCGCTTGGATTGCTGGTATGGATATACATTGTGCTGTTGATTGCTCTGTCCACTGTGAGTGCTGCTTCTCCACCAGGTCCGAGCAAGAGCAACGGCAGCGAAACCGACCTTGCTGCACTGCTGGCTTTCAAAGCGCAGCTGAGTGATCCTCTCAGCATCCTTGGCAGCAATTGGACAGTCGGCACGCCATTCTGCCGATGGGTGGGTGTTTCTTGCAGCCACCACCGGCAGTGCGTCACTGCCCTAGATTTGCGGGACACTCCTTTGCTAGGAGAGCTCAGCCCTCAACTCGGTAACCTCTCTTTCCTCTCTATCCTCAACCTCACCAACACCGGCCTCACGGGGTCACTCCCGGATGATATAGGAAGGCTTCATCGCCTCGAGATACTTGAGCTTGGCTATAACACTCTGTCAGGTAGAATCCCAGCTACCATAGGGAACCTCACGAGGCTTCAAGTTCTTGATCTCCAGTTTAACAGTCTATCTGGTCCAATCCCAGCAGATCTGCAGAACCTGCAGAACCTTAGTAGTATTAATCTCCGTAGGAACTACCTCATTGGCTTGATACCAAACAATCTATTCAACAATACACATTTGCTAACTTATCTCAACATTGGTAACAACAGCCTGTCCGGACCAATACCTGGTTGCATTGGCTCCTTGCCAATACTACAGACTCTCGTCCTGCAAGTCAATAATCTCACAGGCCCAGTTCCACCAGCCATCTTTAACATGTCTACGCTGCGTGCTTTAGCTCTTGGCTTGAACGGCTTAACTGGTCCTCTCCCTGGCAACGCAAGTTTCAACCTCCCAGCTCTGCAATGGTTCTCCATCACTAGAAATGATTTCACTGGTCCAATTCCAGTAGGGCTTGCAGCATGCCAGTACCTCCAAGTTCTTGGCCTGCCTAATAATTTATTCCAAGGTGCTTTCCCACCATGGCTGGGCAAACTGACGAATCTCAATATCGTCTCCTTGGGAGGGAATAAACTTGATGCTGGTCCGATCCCTGCTGCACTTGGCAACCTCACCATGCTGAGTGTCCTAGATCTCGCATCATGCAACCTAACAGGACCCATACCGTTGGACATTCGACACCTAGGCCAACTTTCAGAGTTGCATCTTTCAATGAATCAACTAACAGGACCCATTCCTGCTTCTATTGGCAACCTTTCTGCATTATCATACCTGCTATTGATGGGAAACATGTTGGATGGATTAGTACCAGCAACAGTTGGTAACATGAACTCGCTAAGGGGATTAAATATTGCGGAAAACCACCTACAGGGGGATCTTGAATTCCTTTCTACTGTTTCCAACTGTAGAAAGCTCTCTTTCCTTCGAGTTGACTCTAATTATTTCACTGGAAACCTCCCAGACTATGTAGGTAACCTGTCAAGCACACTGCAGTCATTTGTTGTAGCTGGAAACAAGTTAGGTGGTGAAATTCCGTCTACCATTTCGAATTTAACTGGCCTCATGGTGCTAGCACTTTCGGATAATCAATTCCACAGTACAATACCAGAATCAATCATGGAAATGGTGAATCTCCGGTGGCTTGATCTCAGTGGAAATAGCCTGGCTGGCTCTGTCCCATCAAATGCCGGAATGCTAAAGAATGCTGAAAAGCTATTCCTTCAAAGCAACAAATTATCTGGCTCCATACCAAAGGACATGGGCAACCTCACCAAGTTAGAGCACCTAGTACTATCAAATAACCAATTATCATCAACTGTACCACCGAGCATATTTCATCTTTCTAGCCTTATCCAGTTAGACCTATCTCATAACTTTTTCAGTGATGTGTTGCCGGTTGATATAGGCAATATGAAGCAAATTAACAACATAGATCTCTCTACCAATCGCTTTACTGGTAGCATCCCAAATTCGATTGGGCAACTTCAAATGATATCCTACTTGAACCTATCTGTTAATTCATTCGATGATTCAATTCCAGATTCTTTTGGTGAGCTAACTAGCTTGCAGACTTTGGATCTATTCCATAATAATATTTCTGGTACCATCCCCAAGTATCTAGCCAATTTTACCATACTTATTAGCTTGAACTTGTCTTTCAACAATCTCCATGGTCAGATACCAAAAGGGGGTGTATTCTCAAATATCACATTGCAATCCTTGGTGGGGAATTCAGGGTTATGTGGTGTTGCACGTTTAGGACTTCCATCATGCCAAACAACCTCTTCCAAAAGAAATGGCCGCATGCTAAAATATCTGCTCCCTGCTATAACCATAGTAGTTGGAGCTTTTGCTTTCAGCCTATATGTAGTCATCCGAATGAAAGTTAAGAAGCATCAAAAGATTTCTTCTAGTATGGTTGACATGATCAGCAACAGATTACTCTCCTACCAAGAGCTCGTCCGTGCTACTGATAATTTCAGTTATGATAACATGTTGGGGGCTGGAAGCTTTGGAAAAGTTTATAAGGGTCAGCTGAGTAGCGGTTTGGTGGTTGCCATAAAAGTTATACACCAACATCTGGAACATGCCATGAGAAGCTTTGATACGGAGTGTCATGTGCTTCGAATGGCTAGACATCGGAACTTGATAAAGATATTGAACACTTGTAGCAACCTAGACTTCAGAGCACTTGTTCTTGAGTACATGCCCAATGGTAGCCTAGAGGCACTCCTGCACTCTGAAGGAAGAATGCAATTAGGTTTCCTTGAGAGGGTGGACATTATGCTAGATGTTTCAATGGCAATGGAATACCTGCATCATGAGCACCATGAAGTGGCCCTACACTGTGATTTGAAGCCTAGCAACGTGCTACTTGACGATGATGACTGCACATGTGATGACAGCTCCATGATCTCTGCGAGTATGCCGGGAACAGTTGGGTACATGGCACCAGAATATGGTGCTCTTGGAAAAGCGTCACGAAAGAGCGATGTGTTCAGCTACGGGATCATGCTACTCGAAGTGTTCACTGGGAAAAGACCCACAGATGCTATGTTTGTGGGGGAACTGAACATAAGGCAGTGGGTTTACCAGGCGTTTCTGGTAGAGCTTGTCCATGTACTGGACACCCGACTTTTACAAGATTGCTCTTCTCCCAGTAGCTTGCATGGCTTCCTTGTGCCAGTGTTTGACCTGGGCTTGCTTTGCTCAGCTGACTCCCCGGAGCAAAGGATGGCGATGAATGATGTGGTTGTGACACTGAAGAAGATTAGGAAGGACTATGTCAAATCGATATCAACGACAGGAAGCGTGGCCTTGCCTGCATATACGAAAGAATGA More
Protein seq		MALGLLVWIYIVLLIALSTVSAASPPGPSKSNGSETDLAALLAFKAQLSDPLSILGSNWTVGTPFCRWVGVSCSHHRQCVTALDLRDTPLLGELSPQLGNLSFLSILNLTNTGLTGSLPDDIGRLHRLEILELGYNTLSGRIPATIGNLTRLQVLDLQFNSLSGPIPADLQNLQNLSSINLRRNYLIGLIPNNLFNNTHLLTYLNIGNNSLSGPIPGCIGSLPILQTLVLQVNNLTGPVPPAIFNMSTLRALALGLNGLTGPLPGNASFNLPALQWFSITRNDFTGPIPVGLAACQYLQVLGLPNNLFQGAFPPWLGKLTNLNIVSLGGNKLDAGPIPAALGNLTMLSVLDLASCNLTGPIPLDIRHLGQLSELHLSMNQLTGPIPASIGNLSALSYLLLMGNMLDGLVPATVGNMNSLRGLNIAENHLQGDLEFLSTVSNCRKLSFLRVDSNYFTGNLPDYVGNLSSTLQSFVVAGNKLGGEIPSTISNLTGLMVLALSDNQFHSTIPESIMEMVNLRWLDLSGNSLAGSVPSNAGMLKNAEKLFLQSNKLSGSIPKDMGNLTKLEHLVLSNNQLSSTVPPSIFHLSSLIQLDLSHNFFSDVLPVDIGNMKQINNIDLSTNRFTGSIPNSIGQLQMISYLNLSVNSFDDSIPDSFGELTSLQTLDLFHNNISGTIPKYLANFTILISLNLSFNNLHGQIPKGGVFSNITLQSLVGNSGLCGVARLGLPSCQTTSSKRNGRMLKYLLPAITIVVGAFAFSLYVVIRMKVKKHQKISSSMVDMISNRLLSYQELVRATDNFSYDNMLGAGSFGKVYKGQLSSGLVVAIKVIHQHLEHAMRSFDTECHVLRMARHRNLIKILNTCSNLDFRALVLEYMPNGSLEALLHSEGRMQLGFLERVDIMLDVSMAMEYLHHEHHEVALHCDLKPSNVLLDDDDCTCDDSSMISASMPGTVGYMAPEYGALGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGELNIRQWVYQAFLVELVHVLDTRLLQDCSSPSSLHGFLVPVFDLGLLCSADSPEQRMAMNDVVVTLKKIRKDYVKSISTTGSVALPAYTKE
Function		LRR receptor-like serine/threonine-protein kinase FLS2 [UniProtKB/Swiss-Prot:Q9FL28]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os11g46970	LOC_Os11g46970.1	Chr11	28228913	28232303	+	MSU_osa1r7
CDS seq	ATGGCGCTTGGATTGCTGGTATGGATATACATTGTGCTGTTGATTGCTCTGTCCACTGTGAGTGCTGCTTCTCCACCAGGTCCGAGCAAGAGCAACGGCAGCGAAACCGACCTTGCTGCACTGCTGGCTTTCAAAGCGCAGCTGAGTGATCCTCTCAGCATCCTTGGCAGCAATTGGACAGTCGGCACGCCATTCTGCCGATGGGTGGGTGTTTCTTGCAGCCACCACCGGCAGTGCGTCACTGCCCTAGATTTGCGGGACACTCCTTTGCTAGGAGAGCTCAGCCCTCAACTCGGTAACCTCTCTTTCCTCTCTATCCTCAACCTCACCAACACCGGCCTCACGGGGTCACTCCCGGATGATATAGGAAGGCTTCATCGCCTCGAGATACTTGAGCTTGGCTATAACACTCTGTCAGGTAGAATCCCAGCTACCATAGGGAACCTCACGAGGCTTCAAGTTCTTGATCTCCAGTTTAACAGTCTATCTGGTCCAATCCCAGCAGATCTGCAGAACCTGCAGAACCTTAGTAGTATTAATCTCCGTAGGAACTACCTCATTGGCTTGATACCAAACAATCTATTCAACAATACACATTTGCTAACTTATCTCAACATTGGTAACAACAGCCTGTCCGGACCAATACCTGGTTGCATTGGCTCCTTGCCAATACTACAGACTCTCGTCCTGCAAGTCAATAATCTCACAGGCCCAGTTCCACCAGCCATCTTTAACATGTCTACGCTGCGTGCTTTAGCTCTTGGCTTGAACGGCTTAACTGGTCCTCTCCCTGGCAACGCAAGTTTCAACCTCCCAGCTCTGCAATGGTTCTCCATCACTAGAAATGATTTCACTGGTCCAATTCCAGTAGGGCTTGCAGCATGCCAGTACCTCCAAGTTCTTGGCCTGCCTAATAATTTATTCCAAGGTGCTTTCCCACCATGGCTGGGCAAACTGACGAATCTCAATATCGTCTCCTTGGGAGGGAATAAACTTGATGCTGGTCCGATCCCTGCTGCACTTGGCAACCTCACCATGCTGAGTGTCCTAGATCTCGCATCATGCAACCTAACAGGACCCATACCGTTGGACATTCGACACCTAGGCCAACTTTCAGAGTTGCATCTTTCAATGAATCAACTAACAGGACCCATTCCTGCTTCTATTGGCAACCTTTCTGCATTATCATACCTGCTATTGATGGGAAACATGTTGGATGGATTAGTACCAGCAACAGTTGGTAACATGAACTCGCTAAGGGGATTAAATATTGCGGAAAACCACCTACAGGGGGATCTTGAATTCCTTTCTACTGTTTCCAACTGTAGAAAGCTCTCTTTCCTTCGAGTTGACTCTAATTATTTCACTGGAAACCTCCCAGACTATGTAGGTAACCTGTCAAGCACACTGCAGTCATTTGTTGTAGCTGGAAACAAGTTAGGTGGTGAAATTCCGTCTACCATTTCGAATTTAACTGGCCTCATGGTGCTAGCACTTTCGGATAATCAATTCCACAGTACAATACCAGAATCAATCATGGAAATGGTGAATCTCCGGTGGCTTGATCTCAGTGGAAATAGCCTGGCTGGCTCTGTCCCATCAAATGCCGGAATGCTAAAGAATGCTGAAAAGCTATTCCTTCAAAGCAACAAATTATCTGGCTCCATACCAAAGGACATGGGCAACCTCACCAAGTTAGAGCACCTAGTACTATCAAATAACCAATTATCATCAACTGTACCACCGAGCATATTTCATCTTTCTAGCCTTATCCAGTTAGACCTATCTCATAACTTTTTCAGTGATGTGTTGCCGGTTGATATAGGCAATATGAAGCAAATTAACAACATAGATCTCTCTACCAATCGCTTTACTGGTAGCATCCCAAATTCGATTGGGCAACTTCAAATGATATCCTACTTGAACCTATCTGTTAATTCATTCGATGATTCAATTCCAGATTCTTTTGGTGAGCTAACTAGCTTGCAGACTTTGGATCTATTCCATAATAATATTTCTGGTACCATCCCCAAGTATCTAGCCAATTTTACCATACTTATTAGCTTGAACTTGTCTTTCAACAATCTCCATGGTCAGATACCAAAAGGGGGTGTATTCTCAAATATCACATTGCAATCCTTGGTGGGGAATTCAGGGTTATGTGGTGTTGCACGTTTAGGACTTCCATCATGCCAAACAACCTCTTCCAAAAGAAATGGCCGCATGCTAAAATATCTGCTCCCTGCTATAACCATAGTAGTTGGAGCTTTTGCTTTCAGCCTATATGTAGTCATCCGAATGAAAGTTAAGAAGCATCAAAAGATTTCTTCTAGTATGGTTGACATGATCAGCAACAGATTACTCTCCTACCAAGAGCTCGTCCGTGCTACTGATAATTTCAGTTATGATAACATGTTGGGGGCTGGAAGCTTTGGAAAAGTTTATAAGGGTCAGCTGAGTAGCGGTTTGGTGGTTGCCATAAAAGTTATACACCAACATCTGGAACATGCCATGAGAAGCTTTGATACGGAGTGTCATGTGCTTCGAATGGCTAGACATCGGAACTTGATAAAGATATTGAACACTTGTAGCAACCTAGACTTCAGAGCACTTGTTCTTGAGTACATGCCCAATGGTAGCCTAGAGGCACTCCTGCACTCTGAAGGAAGAATGCAATTAGGTTTCCTTGAGAGGGTGGACATTATGCTAGATGTTTCAATGGCAATGGAATACCTGCATCATGAGCACCATGAAGTGGCCCTACACTGTGATTTGAAGCCTAGCAACGTGCTACTTGACGATGATGACTGCACATGTGATGACAGCTCCATGATCTCTGCGAGTATGCCGGGAACAGTTGGGTACATGGCACCAGAATATGGTGCTCTTGGAAAAGCGTCACGAAAGAGCGATGTGTTCAGCTACGGGATCATGCTACTCGAAGTGTTCACTGGGAAAAGACCCACAGATGCTATGTTTGTGGGGGAACTGAACATAAGGCAGTGGGTTTACCAGGCGTTTCTGGTAGAGCTTGTCCATGTACTGGACACCCGACTTTTACAAGATTGCTCTTCTCCCAGTAGCTTGCATGGCTTCCTTGTGCCAGTGTTTGACCTGGGCTTGCTTTGCTCAGCTGACTCCCCGGAGCAAAGGATGGCGATGAATGATGTGGTTGTGACACTGAAGAAGATTAGGAAGGACTATGTCAAATCGATATCAACGACAGGAAGCGTGGCCTTGCCTGCATATACGAAAGAATGA More
Protein seq	MALGLLVWIYIVLLIALSTVSAASPPGPSKSNGSETDLAALLAFKAQLSDPLSILGSNWTVGTPFCRWVGVSCSHHRQCVTALDLRDTPLLGELSPQLGNLSFLSILNLTNTGLTGSLPDDIGRLHRLEILELGYNTLSGRIPATIGNLTRLQVLDLQFNSLSGPIPADLQNLQNLSSINLRRNYLIGLIPNNLFNNTHLLTYLNIGNNSLSGPIPGCIGSLPILQTLVLQVNNLTGPVPPAIFNMSTLRALALGLNGLTGPLPGNASFNLPALQWFSITRNDFTGPIPVGLAACQYLQVLGLPNNLFQGAFPPWLGKLTNLNIVSLGGNKLDAGPIPAALGNLTMLSVLDLASCNLTGPIPLDIRHLGQLSELHLSMNQLTGPIPASIGNLSALSYLLLMGNMLDGLVPATVGNMNSLRGLNIAENHLQGDLEFLSTVSNCRKLSFLRVDSNYFTGNLPDYVGNLSSTLQSFVVAGNKLGGEIPSTISNLTGLMVLALSDNQFHSTIPESIMEMVNLRWLDLSGNSLAGSVPSNAGMLKNAEKLFLQSNKLSGSIPKDMGNLTKLEHLVLSNNQLSSTVPPSIFHLSSLIQLDLSHNFFSDVLPVDIGNMKQINNIDLSTNRFTGSIPNSIGQLQMISYLNLSVNSFDDSIPDSFGELTSLQTLDLFHNNISGTIPKYLANFTILISLNLSFNNLHGQIPKGGVFSNITLQSLVGNSGLCGVARLGLPSCQTTSSKRNGRMLKYLLPAITIVVGAFAFSLYVVIRMKVKKHQKISSSMVDMISNRLLSYQELVRATDNFSYDNMLGAGSFGKVYKGQLSSGLVVAIKVIHQHLEHAMRSFDTECHVLRMARHRNLIKILNTCSNLDFRALVLEYMPNGSLEALLHSEGRMQLGFLERVDIMLDVSMAMEYLHHEHHEVALHCDLKPSNVLLDDDDCTCDDSSMISASMPGTVGYMAPEYGALGKASRKSDVFSYGIMLLEVFTGKRPTDAMFVGELNIRQWVYQAFLVELVHVLDTRLLQDCSSPSSLHGFLVPVFDLGLLCSADSPEQRMAMNDVVVTLKKIRKDYVKSISTTGSVALPAYTKE More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.600322	0.124483	0.188417

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_11g0691800	SBH	0.156598	0.000000	0.927697
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os11g47180	SBH	0.099790	0.118828	0.139263
Nipponbare \| IRGSP 1.0 \| RAP-db	Os11g0691800	SBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_11g0024590	SBH	0.0	5.368335	1.046873
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_11g0024560	RBH	0.0	0.0	0.000000
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_11g0024170	SBH	0.0	0.667104	0.0
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_11g0023850	RBH	0.0	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_11g0024390	SBH	0.0	0.0	0.0
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_11G0444200	SBH	0.024749	0.065174	0.025844
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_11g0024800	SBH	0.009890	0.000000	0.012598
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_11G0442400	SBH	0.3193365	0	0.811963
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_11g0024650	SBH	0.008922	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_11g0024760	SBH	0.027641	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_11g0024040	SBH	0.000000	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_11g0023910	RBH	0.018860	0.0	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_11g0024300	SBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_11G024320	SBH	0.088229	0.0	0.0
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_11g0024500	SBH	0.0	0.0	0.0

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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