Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g46860 | OGI:11010520 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:28119286-28122173 | ||||||||
| Gene Symbol | OsiWAK1, WAK1 | ||||||||||
| DNA seq | ATGGTGCTTGACTGGGCCATCAGGGAAAACGGGTCATGCTCGGGGTCGGTAGCTCCTGCCTGCGTCAGCGACCACAGCCACTGCAACAATAGGAATAACGGAGAGGGGTATATCTGCAAGTGCTCCGAGGGATACGACGGCAATCCCTATCTCAAAGGCAATGGCGGATGCATAGGTTAGTTGTTAATTAATTATATACTGCAGATTACTGACTAGCTAACTGTATTCTTCTCTAAGTTGGCATGCATGAAGATATATCCTATCTAGTATGTGCACAAGTGGATAACTGATCTTTTTTCATGGTACCTAAAATCACAATTATCCATGTTAGGTTAAAGAACCGGTATTAAAGATACTCCAAGTCCCTCAAAACATTTTTAGTCCGGGTTGGTATAAACCAACCGTGACTAAACATTGATCTTTAGTCCCAATTGGTAACACCAACCTGGACTAAAGATTGAGGATCTTTAGTTCTGGTTGGTGTTACTATCTGGGACTAAAGATATCTATTCAAGTAAGATGTATGTAGTAGGTGGAAAGGTTATGCATATGGAGGCTAAGGTGAGAGATCTTAAGTTCGAATCTCACATCCCACTTATATTTCTCATTTGCTATGCAATTTTAGTACCGGTTCTCAAGTGGGACTAAAGATCTCCACTAAAGATAATACCAGGACTAAAGATCTCCCGATTTGCTCGACTCAGTTGTTATAACCGGGGGACTAAAGATCTCCTGATTTACTCATCTCGGTTGTTATAACGGGAGTAAAAATGGTTGTAAAGGTTGTTATAACCGGGAGTAAAAACCGTTTCTCCATCTTCCGATTTGCTCGCGCCGGTTGTTATAACCGGGAGTAAAAATGGTTGTAAACCGGAAGTAAAAACCGTTTCTCCCGCAATGGAGTAAAAATGGTTGTAAACCGGAAGTAAAAACAGTTTCTCCAGCTGCGGTGGTACGTGATTTGCTCGTCCCGGTTGCTATAACCACGAATAAAAATGGTTATAAATCGGGAGTAAAAACCGCTTCTCCAGTAGTGGTGTGGTACGTCGTCGATAGCTAGCGAGTATGGTATAGCTTAATGTTTGAAGTTGCTCGCGTACGTAAGCGCGACCGGATTGGTAGCTTAATTATTTGGATTGTTTATCACCACTATATATATGTGTGCAGATATTGACGAGTGCCATCTCAGGACAAAGTCTTCTATATACGGCCAACTCTATCCATGTTACAATGGTAGCAGATGCCAGAACACAGATGGCGGTTACAAGTGCATATGCCGATTTCCCCATAGAGGAGACGGTACTGGCAAGGGATGCAAGCCCATAATTCCCTTACGTATAGTCGCCACACTAGGTGAGCCGATCGACGCCGTTGATTCTTGATTAATTATTACTACTAGTACTACCTAGTAGCTAGTATACTTAATTGTGGCCGCCCATATGTACATGAATTTTGATTAATTGCTAATTTTACATATGGATTATTCAAGCAGTATCTATTTATGGGTCCAATAGATGAACCCACAGAATCCTTAATTAATTATATACATATATTGATCATGCAGCAACGGTATGCGCCATGGTTGCTCTTTTGGGCCTTGCGTGGTTCATTCGTTGTGAGCACAAGGCATGGGAGCAGAGGGGGTTCTTCGAAAGTAACGGTGGCCAACTACTGAAGGATATGGGCGTTACCACCTTCACGCAGGAGCAGCTTGACACGATAACAAACAAGAAGAGAACCAAGATCGGGAAGGGCACCTTCGGTGAGGTCTATAAGGGACTCCACGATGACCAGGAGGTCGCCGTCAAATACTCCACCGCGAAGAGCAGTATTAGACGAGGCAAATACGAGTTCGTGAAAGAGATGGCCTTTAGAAAATCCATTAGTTCCAATGGCGATGGTACGCTCGGCCAAAAAGCGTCCGTGAATGAGATCATTGTCCAGTCACAGATGCGGCACGACAACGTGGTCCGTCTCATCGGGTGCTGCATGGAGACGGAGGTCCCCATGCTGGTCTTCGAGTTCATCCCCAATGGGAGCCTCGAGACCGTGCTTCATGGACCTGACCTGTGGGCTCTCTCGCTGCCAGAACGCCTCGACATTGCCATCGGCTCCGCGGCTGCTCTTGCCTACATGCATTCTCTTGGTCTCCAAAGCATTATTCATGGAGATGTCAAGCCAGCCAACATCCTTCTTGGTAAGGATCTCGTGCCTAAGGTCTCTGACTTTGGGTCCTCCAAGTTAGGCCTTGCAACCAAGGAAGTATGTGCCGACAAGAACTACATCGATCCTGTGTGCATGAAAACTAACATTGTCACACAGAAAAGCGATGTTTACAGCTTTGGGATCGTACTCATAGAACTCATTACTCGGAAAAAGGCCAAGTATGACGGGAGAAACGTTCAGTCAGATTTTGTCAACTGTCACACGGACAACAATGCAAGGAGGGAGATGTATGACCAGGACATGCTGCATACTGATGCCCACAGCCTTCAGCCTGATCAGTGCATTGAATGCCTCGACACGATGGCGGCCATCGCAGTCCGGTGTCTCAAAGATGACGTGGATGAGAGGCCCACCATGGCAGAGGTGCTGGAGGAGCTTAAGCAATTGAGAGCAAGCAACGAACTGATGGTGTAGAAGATGAACCAAGCCTGGTCTCTTCAGACTCGGTTGGTAGTCCATCGATATATGGATTCGTCCTTCTCGCTATTGTTTTCTCCGTCGATCTTGCAGATGTGACGTTTGTTGCTTCCGCCGGGTTGTCCTGTTATGCTTGTAGAGCTGCAGCATTGTGCTATTGTCGTTTAGTTTCCTCTTGTAACAAGTATCGATAACGATCTTTTAGTTCTGGTATATCATGAATAAATCACAACGTAACTGAGAAA
More
|
||||||||||
| CDS seq | ATGGTGCTTGACTGGGCCATCAGGGAAAACGGGTCATGCTCGGGGTCGGTAGCTCCTGCCTGCGTCAGCGACCACAGCCACTGCAACAATAGGAATAACGGAGAGGGGTATATCTGCAAGTGCTCCGAGGGATACGACGGCAATCCCTATCTCAAAGGCAATGGCGGATGCATAGATATTGACGAGTGCCATCTCAGGACAAAGTCTTCTATATACGGCCAACTCTATCCATGTTACAATGGTAGCAGATGCCAGAACACAGATGGCGGTTACAAGTGCATATGCCGATTTCCCCATAGAGGAGACGGTACTGGCAAGGGATGCAAGCCCATAATTCCCTTACGTATAGTCGCCACACTAGCAACGGTATGCGCCATGGTTGCTCTTTTGGGCCTTGCGTGGTTCATTCGTTGTGAGCACAAGGCATGGGAGCAGAGGGGGTTCTTCGAAAGTAACGGTGGCCAACTACTGAAGGATATGGGCGTTACCACCTTCACGCAGGAGCAGCTTGACACGATAACAAACAAGAAGAGAACCAAGATCGGGAAGGGCACCTTCGGTGAGGTCTATAAGGGACTCCACGATGACCAGGAGGTCGCCGTCAAATACTCCACCGCGAAGAGCAGTATTAGACGAGGCAAATACGAGTTCGTGAAAGAGATGGCCTTTAGAAAATCCATTAGTTCCAATGGCGATGGTACGCTCGGCCAAAAAGCGTCCGTGAATGAGATCATTGTCCAGTCACAGATGCGGCACGACAACGTGGTCCGTCTCATCGGGTGCTGCATGGAGACGGAGGTCCCCATGCTGGTCTTCGAGTTCATCCCCAATGGGAGCCTCGAGACCGTGCTTCATGGACCTGACCTGTGGGCTCTCTCGCTGCCAGAACGCCTCGACATTGCCATCGGCTCCGCGGCTGCTCTTGCCTACATGCATTCTCTTGGTCTCCAAAGCATTATTCATGGAGATGTCAAGCCAGCCAACATCCTTCTTGGTAAGGATCTCGTGCCTAAGGTCTCTGACTTTGGGTCCTCCAAGTTAGGCCTTGCAACCAAGGAAGTATGTGCCGACAAGAACTACATCGATCCTGTGTGCATGAAAACTAACATTGTCACACAGAAAAGCGATGTTTACAGCTTTGGGATCGTACTCATAGAACTCATTACTCGGAAAAAGGCCAAGTATGACGGGAGAAACGTTCAGTCAGATTTTGTCAACTGTCACACGGACAACAATGCAAGGAGGGAGATGTATGACCAGGACATGCTGCATACTGATGCCCACAGCCTTCAGCCTGATCAGTGCATTGAATGCCTCGACACGATGGCGGCCATCGCAGTCCGGTGTCTCAAAGATGACGTGGATGAGAGGCCCACCATGGCAGAGGTGCTGGAGGAGCTTAAGCAATTGAGAGCAAGCAACGAACTGATGGTGTAG
More
|
||||||||||
| Protein seq | MVLDWAIRENGSCSGSVAPACVSDHSHCNNRNNGEGYICKCSEGYDGNPYLKGNGGCIDIDECHLRTKSSIYGQLYPCYNGSRCQNTDGGYKCICRFPHRGDGTGKGCKPIIPLRIVATLATVCAMVALLGLAWFIRCEHKAWEQRGFFESNGGQLLKDMGVTTFTQEQLDTITNKKRTKIGKGTFGEVYKGLHDDQEVAVKYSTAKSSIRRGKYEFVKEMAFRKSISSNGDGTLGQKASVNEIIVQSQMRHDNVVRLIGCCMETEVPMLVFEFIPNGSLETVLHGPDLWALSLPERLDIAIGSAAALAYMHSLGLQSIIHGDVKPANILLGKDLVPKVSDFGSSKLGLATKEVCADKNYIDPVCMKTNIVTQKSDVYSFGIVLIELITRKKAKYDGRNVQSDFVNCHTDNNARREMYDQDMLHTDAHSLQPDQCIECLDTMAAIAVRCLKDDVDERPTMAEVLEELKQLRASNELMV |
||||||||||
| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g46860 | LOC_Os11g46860.1 | Chr11 | 28119286 | 28122173 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTGCTTGACTGGGCCATCAGGGAAAACGGGTCATGCTCGGGGTCGGTAGCTCCTGCCTGCGTCAGCGACCACAGCCACTGCAACAATAGGAATAACGGAGAGGGGTATATCTGCAAGTGCTCCGAGGGATACGACGGCAATCCCTATCTCAAAGGCAATGGCGGATGCATAGATATTGACGAGTGCCATCTCAGGACAAAGTCTTCTATATACGGCCAACTCTATCCATGTTACAATGGTAGCAGATGCCAGAACACAGATGGCGGTTACAAGTGCATATGCCGATTTCCCCATAGAGGAGACGGTACTGGCAAGGGATGCAAGCCCATAATTCCCTTACGTATAGTCGCCACACTAGCAACGGTATGCGCCATGGTTGCTCTTTTGGGCCTTGCGTGGTTCATTCGTTGTGAGCACAAGGCATGGGAGCAGAGGGGGTTCTTCGAAAGTAACGGTGGCCAACTACTGAAGGATATGGGCGTTACCACCTTCACGCAGGAGCAGCTTGACACGATAACAAACAAGAAGAGAACCAAGATCGGGAAGGGCACCTTCGGTGAGGTCTATAAGGGACTCCACGATGACCAGGAGGTCGCCGTCAAATACTCCACCGCGAAGAGCAGTATTAGACGAGGCAAATACGAGTTCGTGAAAGAGATGGCCTTTAGAAAATCCATTAGTTCCAATGGCGATGGTACGCTCGGCCAAAAAGCGTCCGTGAATGAGATCATTGTCCAGTCACAGATGCGGCACGACAACGTGGTCCGTCTCATCGGGTGCTGCATGGAGACGGAGGTCCCCATGCTGGTCTTCGAGTTCATCCCCAATGGGAGCCTCGAGACCGTGCTTCATGGACCTGACCTGTGGGCTCTCTCGCTGCCAGAACGCCTCGACATTGCCATCGGCTCCGCGGCTGCTCTTGCCTACATGCATTCTCTTGGTCTCCAAAGCATTATTCATGGAGATGTCAAGCCAGCCAACATCCTTCTTGGTAAGGATCTCGTGCCTAAGGTCTCTGACTTTGGGTCCTCCAAGTTAGGCCTTGCAACCAAGGAAGTATGTGCCGACAAGAACTACATCGATCCTGTGTGCATGAAAACTAACATTGTCACACAGAAAAGCGATGTTTACAGCTTTGGGATCGTACTCATAGAACTCATTACTCGGAAAAAGGCCAAGTATGACGGGAGAAACGTTCAGTCAGATTTTGTCAACTGTCACACGGACAACAATGCAAGGAGGGAGATGTATGACCAGGACATGCTGCATACTGATGCCCACAGCCTTCAGCCTGATCAGTGCATTGAATGCCTCGACACGATGGCGGCCATCGCAGTCCGGTGTCTCAAAGATGACGTGGATGAGAGGCCCACCATGGCAGAGGTGCTGGAGGAGCTTAAGCAATTGAGAGCAAGCAACGAACTGATGGTGTAG
More
|
|||||||
| Protein seq | MVLDWAIRENGSCSGSVAPACVSDHSHCNNRNNGEGYICKCSEGYDGNPYLKGNGGCIDIDECHLRTKSSIYGQLYPCYNGSRCQNTDGGYKCICRFPHRGDGTGKGCKPIIPLRIVATLATVCAMVALLGLAWFIRCEHKAWEQRGFFESNGGQLLKDMGVTTFTQEQLDTITNKKRTKIGKGTFGEVYKGLHDDQEVAVKYSTAKSSIRRGKYEFVKEMAFRKSISSNGDGTLGQKASVNEIIVQSQMRHDNVVRLIGCCMETEVPMLVFEFIPNGSLETVLHGPDLWALSLPERLDIAIGSAAALAYMHSLGLQSIIHGDVKPANILLGKDLVPKVSDFGSSKLGLATKEVCADKNYIDPVCMKTNIVTQKSDVYSFGIVLIELITRKKAKYDGRNVQSDFVNCHTDNNARREMYDQDMLHTDAHSLQPDQCIECLDTMAAIAVRCLKDDVDERPTMAEVLEELKQLRASNELMV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0691100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g46950 | RBH | 0.064594 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0691100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024580 | RBH | 0.0 | 24.940462 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024490 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024150 | RBH | 0.0 | 93.442383 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023930 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024380 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0443700 | RBH | 0.0665605 | 0.0833025 | 0.0615995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0025060 | RBH | 0.037942 | 27.278511 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0441100 | RBH | 0.3551555 | 3.569955 | 0.232309 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024620 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024740 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024340 | RBH | 0.0 | 411.712585 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023810 | SBH | 2.759746 | 0.0 | 0.221914 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024240 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024250 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024470 | SBH | 0.0 | 1.171621 | 0.0 |
