Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g30020 | OGI:11051680 | 1/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:17456515-17464115 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATACTCCTAGGTCTTTAGTAAGCTTCCTAGAAGATTCACCCAAAATCTTCATAGACTGCGACCAACAGTCAAGCTCACAAAGGTTAGTTCTTTCAAGAATGCTCTGCAGGACAACATCTTCGCTAATTAAAGCCAACAGAACTCATTAAGGCATAGCCAACCTGCCTTGCAGCTCACGAGAGTACATGCATCTTCACTTGGAGAGGGTATATATATTGATACTCTCCTCTAGTTTACTAATGGTTTGTTCTTCCCAGGATCTAATTCACGGGATCTCCGATCACATAGACTGGGTTACCACCATAGTATAACTCACATGGGTCTCAAACCCATCTCCTTCGATGCATTGTTTATCACATTTCGTGATAGTCCCTTCGTGAAGGGATCTGCCAGGTTTCTCGCTGTTTGGATGTAATCCAACGTTATAACTCTGGAGTTTCTTAATTTCCTGACAGACTTCAATCGTCTTTTCACATGTCTAGACGATTTCATATTATCCTTAGAACTATTCACTTTGACAATTACCGTTTGATTGTCACAGTTCATAAGGATAGCCGGCACCGGTTTTTCAACAACAGGCAGATCCATTAATAGATCACGCAGCCATTCTGCCTCAACAGTAGCAGTATCCAGTGCCGTTAGCTCTGCTTCCATGGTTGACCTCGTCAAAATGGTCTGTTTGCAAGACCTCCATGAAACAGCACCACCACCCAGTGTGAAAACATATCCACTAGTGGCTTTGATCTCATCCACATCAGAGATCCAGTTAGAATCACTATAACCCTCCAGTACCGCAGGATACCCAGTATAGTGAAGCCCTAATTCCACAGTACCTTTCAGATAGCGCATTACTCGCTCAAGCGCACGCCAGTGATCATCTCCCGGATTAGAGGTAAATCGGCTCAACTTGCTCACAGCAAAGGAGATATCAGGCCTAGTTGCACTAGCCAGGTACATCAACGAGCCAATGATTTGGGAGTATTCTAGTTGATTCCTAGCAATTCTCTTGTTCTTGCGAAGCAACAAGCTAGGATCATAAGATGTTGGAGAAGGCTTACTATCAATGTAGCCAAAGCGATTCAAGATCTTCTCCACATAATGGGACTGCAAGAGTGTAATCCCATTCTCACCTCTAATTAGCTTAATGTTTAAGATAACATCAGCTACTCCCAAATCTTTCATATCAAAATTTTGAGACAAGAATGATTTAACCTCATTTATCACCTCAAGGTTTGTCCCAAATATCAGTATGTCGTCAACATACAAGCACAAAATAACTCCCTCACCCCCACCATGGCGATAGTACATACATTTATCTGCCTCATTGACTGCAAAGCCTGCAGATGTCAATGTTTTGTCAAATTTCTCATGCCATTGCTTAGGAGCTTGTTTCAGACCATACAAAGACTTCAACAATTTACACACTTTGCCTTCTTGACCTTCAACTACAAACCCATCAGGTTGATCCATATAGATCTCCTCATCCAGCTCTCCATTAAGAAAAGCTGTCTTAACGTCCATTTGATGAACGAGAAGACCATGTGAGGCTGCAAGGGAAAGTAGCACACGAATTGTGGTCAATCTAGCAACAGGTGAGTAAGTGTCAAAGAAATCTTCGCCTTCTTTCTGAGTATAGCCCTTAGCAACAAGCCGAGCCTTATACTTTTCAATAGTACCGTCAGGCCTAAGCTTCTTCTTGAACACCCACTTGCACCCCACAGGTTTACACCCATAGGGTCGCTCTGTCACCTCCCAAGTCCCGTTAGCGATAATGGAATCCATTTCACTACGGACAGCCTCCTTCCAGTAGTCTGCATCAGGAGATGCATATGCTTCTGAAATTGACTTAGGAAGTGTCATCCACGAGGTACACAGTGAAATCATCACCAAAAGACTTAACCGTCCTTTGTCTCTTACTCCTTCGAGGAGCTTCACTGACATCCTCCTCAGAGACAAGTTCATGTGTATGTTCAGTTTGTTCTGGTGGTGTGATTGAACTGGGAATTATTTCAGAGGGTTGGTTCGAACCACTATGTGTATCCTTCATTGGGAAAAAGCTCTCAAAGAAGGTAGCATCACGAGACTCCATAATTGTACCAACATGCATGTCCGGTACCTCGGATTTAACTATTAAAAATCTATAGGCAATGCTATGATGAGCATATCCCAGAAAAACACAGTCCACAGTCTTAGGTCCAAGTTTGCGCTTCTTCGTTATTGGTACATTGACTTTCGCCAAGCACCCCCATGTGCGCAAATAAGAAAGTGATGGTTTTCTACCAATCCATATCTCATATGGTGTTTTGTCTTTATTTCTGTTAGGAACTCTGTTTAACACATGATTTGAGGTCAACAATGCCTCCCCCCACCATGCCTTAGGCAGTCCCGCGGTGTCCAACATGGCATTCACCAAGTCAGTCAGTGTGCGGTTCTTCCTTTCAGCAATCCCATTAGACTCGGGAGAATAGGGAGGCGTCCTCTCATGTATGATGCCATGTTCCTCACAGAATAAGTCAAACTCGTTCGAGAAAAACTCTCCACCACGATCAGACCTAAGCCTTTTTATCTTTCTGTCAAGTTGATTTTCAACTTCTGCCTTATAAATTTTAAAATAGTCTAGAGCCTCGTCTTTCGTTTTCAACAAGTACACATAGCAAAATCTAGTAGCATCATCAATCAATGTCATGAAATATCGTTTTCCACCCTTCGTCAACACCCCATTCATTTCACAAAGATCTGAATGTAGGAGTTCTAGTGGTGCCAAGTTTCTCTCCTCGGCAGCCTTGTGAGGCTTGCGAGGTTGCTTCAATTGCACACAACTATGGCACTTAGAACCTTTGACAATGGAAAACTTAGGAATTAAACACATGCTGGAAAGCCGAGACATCAAGCCAAAATTAATATGACATAAACGTGAATGCCAAACATTAGCCTCATCATCCACACTGCCACAAATATGGTTCACGGACTTATTGCAGAAATCAGAAAGGGAAAAGCGGAACAGGCCTCCGCACTCATAACCTTTACCAATAAAATATCCATGTTTAGACACGACTACTTTATTAGACTCAAAAACCAACTTAAATCCGTCTCTAGTCAAACGGGAGCCACTAACAAGATTCCTGTCGATAGAAGGGACATGCTGCACGTTCTTCAGCTGCACGATCTTTCCCGAAGTAAACTTCAGATCTACCGTGCCAACACCATGAACAGAAGCATGTGACCCATTCCCCATTAGGACGGTGGAACCCCGTGCGACCTGATAAGAAGAAAACAATGAGATGTCAGCACAAACATGTACATTGGCCCCAGTATCAACCCACAAATTAGTAGATTGATTAACTGAAAAAACAGTAGGTAAATTACCATACCCGCTTCCATCTCCAGTGTTGCCAATGGTCACATTAGCAGACTTAGAAGTCTGCCCTGCAGGTGCCTTCATCCCCTTGCGCTGTGGACACTTCCTAGCCAGATGACGAACTTGGCCACACACAAAGCAAGTCCTCTCATCCTGATTAGGATTGTTGTTGTTCTTCTTCTGCTTCTTGAAGTTGGTGGTCTGCTGAGCTTTGTATTTCCCCTTGCTCTTGTTCTGGGCCTTGTGCACAACATTGGCACTGGACTGCCCACCATCGCCCTTAGACGCGGCATCTTTTTCCCGAGCTTTCTCCTCAACATCAAGAGACGCAATCAACCCCTCAACGGAGTATTCCTGTCTCTTGTATTTGAATGCAGTACCGAAACTCCTCCAAGATGGAGGTAGTTTTGCAATAATGCACCCGGCCACAAATTTGTCGGGTAAGACACACTTAAGGAGTTCGAGTTCCTTAGCCATGGTTTGTATCTCATGAGCCTGTTCGACTACAGAACGGTTGTCAGCCATTTTGTAGTCATGAAACTGCTCCATGATATACAGATCATTGCTAGCATCAGTAGCACCGAATTTAGTATTCAGTGCATCCCACAACTCCTTAGCGTCGGTCATATGCATATACACCTCGACCAGACGATCGCCAAGAACGCTAAGAATGCATCCCACAAAGAGAGTAGTGGCTTCCTCGAATTGCTTCTGCTGTTCAGCAGTAAGAACTCCTACAGGTTTGCCAGTACTCACCCAGAAGCATTTCATAGCTGTCAGCCACAGAGTGACCCTGATCTGCCATCTCTTAAAATGCACACCGGTGAATTTATCCGGCCTCAGTGCATCAGCAAAACCAGCCATAGTAAAATCACAGTGCCTATAATAAGGTTTTTGGATTGTTGAGATTATAGACATATAATGATTTAATCTATTCCATAAATAAATCATGACATTACAGATGAAAACTAGCATGAACGCATCATTAGATCTACACATGTAAACTACACAGTATAACATGAACAGATCAAATATGCGCAACATATTGAACACGTACCGAGGTGACGAAAAGACCGGCTGCTTGGTCGAAACATTTCGCAGGTGTCTACGAAGGCACGAAACACGCGAGCGAAGAGGAAGGCGAGCCGTCACGAACGAACAGGGAGCAGTCGCGCGAAGCGCTTCCCAAAAACCTTATTGCCGCCTTCTCCCGGTGCAGGACGTCAAAGGCTGAGGTTCCGGAGACCTGCTCTCCCGATCGCTGGTGCACGCCGGCGAGCGGGATGGAGTAGTCTACGAGCGACGGCGCAGTACAAAGTAGGAGGCAAACCCTAGATTGATTTTGCGTATATACTGCGTGAAGACGGCGGGTCGGTTTATATAGAGAAGGGTCGCTTGATCAGGGCGCCCGCACGATCTCTACTGCGCGTAACCGAACCGGATAAGTCGCGCGTAACTTATCCGGACTCCACGCCGTTTGCACGCACCGGATTTTTCGGAACGTTTCCAAAACAAAAACGAATCCGAATTTGCAGCAAAACAAAACTGCAAAAGGAGGCTGCATCTGCGCAAGGGTGAGGAGCCAATTTTTCGGACTATTCGACGTCGTACGTCGTGCACGCGCGCCGCACGCCCTGCCAGGCGAGGCGAGCGAGCGCGCGCGTGTTTCCCCTCTTCTCTCCACCACACATGCTTCAAGTGGCTAGGAGGACATCCTCCCTTTTAAGGAGGTCCCCCTCTCCTAGAATAAGCAAGGTGGTACTAAACTCCACATGCATGCCATCCCATGAGGTGGGCTTTTGTGATTTTCCAAAGAATTAATCTTCGAGTGGGCTAAGGCCCATTCATTAATTCCAACAAACATATCATGCATAAACATGGTCCAAACATCATATATAAATATCTGATAGAATTTTTGTTGGCATAGATTATGCAGTGATGAAAATTTTACCTCTTCGCGCCTGCGCTTGCCGCTGCGATTAGCCCTTGCAGATTGCTCAAATGCCTCCACTTTATGGCGTGTCATCTCGTACCCGTACTCATCCACCACGTCCTCCGCGTCGTAGGCCACCTTCTTCAGTTCCTTGAGCCGCAGCTTGGCTGTTTCCTCCCTGATGTTCCACTGTTCCTCTGCATCGTGCAGTGTCGCATGGATCCTGTGCATTGTTCTCTCAAGCCTCTTCAGAACCTCAAGGTCCTCGCTTTCAGCTGGCGCTGCGGAAGACGATGACGATGCAGGTGTTGATACCAGACATGCTGGCAGCAAGGAATAGAGCTTGTCGATCGCCCATTCGATAGCCATGGAGGCGAATACTCCAGCCATCTCAAAACCCACCCGATTTTCCTTCTAGGAAGGTCAACAAATCAAATCCTATCAATCATAGATGTAACGAGTTTTGGAATGTTAAGCTTTATGTTTATTGTCCTTGAGAACAAACGTATAATAGGTAATATACCTTTTAGTAATTAATAATTTGTGATATCTCCTAATACCAGTGCTAAAGAATTGTAGAGGTCACGGTCTATCTTGGCTCCGCAGCAATTGTCAAATTTCATAGTATTGGTACCAACAATAAGATGATTTTTCTAATTAAAATTCAAATTAGACCCTCTATATATGTTGGCCGGTTACCTTGACAACCTCAAATATCGTAAATTTTAGAGATCTGCTCCGGTCCAACAAAAAGTACCTCGAAGTACTGGTACCTCACGATACCAAATCGTTTTCGATCGTTGGATCTAACAATGTCCATCCTTCCCAACTAGATCCAACCATCGAAAACGATTTAGTACTGTGAGATACCGGTACCTCGAGGTATTTTTTTTGTTGGACCGGAGCAAATCTCTAAAGTTAAACATTTTAAGTGTACTTTACAGTTTTTCATTCCAATACCCAACTGCTGTGAAATGCTGGTACACTCCTATAATTTAAATCACACAAAAAAATAACATTTCAGATCAATGCAAGAGATGAGAATTGGCCTACAAATTAAATTAACGACCACTTTTATGGTGGTCTCTACTTGTTGTTTCCTACAACCAATAATATCCCGCGCTTTGCTTAATGAGTTTTACTCGATACCCCGCGTTTTGCTGCGGGATATATGGATGCATGAATGCATGTTATACATTATAGAAATGGTAATATGTATATGTTTAGGTAATATAAAAATGATGTGAAGATAATGATTTAACATTGTTTGCATATTGAGTTCTAAAAATAGAACAAAATTATAAACGATGTCATGTTTACATGATATTTAAGATACTCTAGATAATAATTACTTTTGAGTGATGATGTGATACACTTACATGTAATTTAGAATACTCTAGAAAATAATTGCTAGTGGGTGAAGATGTGACACACACTTACTTACATGCTGAGCTTTAGAAGTTAGTAGACATCAACTTTATAGTAAGATAGGATTAGCGGTAGAAAAAAAAGTGATACTACTTTGTCCTATATAAGAAAAAATGATACTCCCTCCATTCCTACCTAAATATAAGAGATTGTGGTTGAATGTGACATATATCATAATACAACGAATCTGGACATGAAGTTTGTCCAGATTCGTTATACTAGAATATGTCACATCCAACCAAAATCCCTTATATCTATATAGATATACGGAGGGAGTACTGCTTTGTAGCTGACGTGGTAGTATTACGAGAGAAGATCGATTGGACAATGAAAGATAAAGGTTCTAAATGCTAGAATAAACCACCATAAAAGTTATCTAAAATAGTACTACCAGAACAGCAAAAATATGTGGTTCTAACATGAGATAAAAATATGACGAGAGGCACCTACAAATCCATGACCAGTACCGACATCATATCGGCAAACAAATCAACCTAAGCATATTTTTTAAGCATTTCTTAAGCAGTACAAACCCCGACTTCTCACAGTAATCGTACTTGTAGGTCAAACAGAAAGGAACAAACTGGTGATGAAATACTGAAATATATGATTATATGCTTGAGCAAAAGTGCAGCACAGAACTGAAGTGGTGTCCAAAACCGAAAAAACAAACAAACAAATTCGTATCTTAATCTTACCGAGGATCGATGCGAGCCTCAGATTGTGGCTGGTGTCCGGAGGTTCTCTGCTCCAAGTGCTCGAAGAATCCAAAGGCCAGCCGAACCACAGTCCGCACGCTGGAGGAAGAAGGTGGATAATTAGGTGAGTTGGGGGCATGCGGGGGATTGGGTATCCCCTTTTCCCAAACCCTCTCCCTCAT
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| CDS seq | ATGAGGGAGAGGGTTTGGGAAAAGGGGATACCCAATCCCCCGCATGCCCCCAACTCACCTAATTATCCACCTTCTTCCTCCAGCGTGCGGACTGTGGTTCGGCTGGCCTTTGGATTCTTCGAGCACTTGGAGCAGAGAACCTCCGGACACCAGCCACAATCTGAGGCTCGCATCGATCCTCGGTGCCTCTCGTCATATTTTTATCTCATGTTAGAACCACATATTTTTGCTGTTCTGGAGTGTACCAGCATTTCACAGCAGTTGGGTATTGGAATGAAAAACTGTAAATTGGGAAGGATGGACATTGTTAGATCCAACGATCGAAAACGATTTGGTATCGTGAGGTACCAGTACTTCGAGAAGGAAAATCGGGTGGGTTTTGAGATGGCTGGAGTATTCGCCTCCATGGCTATCGAATGGGCGATCGACAAGCTCTATTCCTTGCTGCCAGCATGTCTGGTATCAACACCTGCATCGTCATCGTCTTCCGCAGCGCCAGCTGAAAGCGAGGACCTTGAGGTTCTGAAGAGGCTTGAGAGAACAATGCACAGGATCCATGCGACACTGCACGATGCAGAGGAACAGTGGAACATCAGGGAGGAAACAGCCAAGCTGCGGCTCAAGGAACTGAAGAAGGTGGCCTACGACGCGGAGGACGTGGTGGATGAGTACGGGTACGAGATGACACGCCATAAAGTGGAGGCATTTGAGCAATCTGCAAGGGCTAATCGCAGCGGCAAGCGCAGGCGCGAAGAGATGCAGCCTCCTTTTGCAGTTTTGTTTTGCTGCAAATTCGGATTCGTTTTTGTTTTGGAAACGTTCCGAAAAATCCGATTAAATCATTATATGTCTATAATCTCAACAATCCAAAAACCTTATTATAGGCACTGTGATTTTACTATGGCTGGTTTTGCTGATGCACTGAGGCCGGATAAATTCACCGGTGTGCATTTTAAGAGATGGCAGATCAGGGTCACTCTGTGGCTGACAGCTATGAAATGCTTCTGGGTGAGTACTGGCAAACCTGTAGGAGTTCTTACTGCTGAACAGCAGAAGCAATTCGAGGAAGCCACTACTCTCTTTGTGGGATGCATTCTTAGCGTTCTTGGCGATCGTCTGGTCGAGGTGTATATGCATATGACCGACGCTAAGGAGTTGTGGGATGCACTGAATACTAAATTCGGTGCTACTGATGCTAGCAATGATCTGTATATCATGGAGCAGTTTCATGACTACAAAATGGCTGACAACCGTTCTGTAGTCGAACAGGCTCATGAGATACAAACCATGGCTAAGGAACTCGAACTCCTTAAGTGTGTCTTACCCGACAAATTTGTGGCCGGGTGCATTATTGCAAAACTACCTCCATCTTGGAGGAGTTTCGGTACTGCATTCAAATACAAGAGACAGGAATACTCCGTTGAGGGGTTGATTGCGTCTCTTGATGTTGAGGAGAAAGCTCGGGAAAAAGATGCCGCGTCTAAGGGCGATGGTGGGCAGTCCAGTGCCAATGTTGTGCACAAGGCCCAGAACAAGAGCAAGGGGAAATACAAAGCTCAGCAGACCACCAACTTCAAGAAGCAGAAGAAGAACAACAACAATCCTAATCAGGATGAGAGGACTTGCTTTGTGTGTGGCCAAGTTCGTCATCTGGCTAGGAAGTGTCCACAGCGCAAGGGGATGAAGGCACCTGCAGGGCAGACTTCTAAGTCTGCTAATGTGACCATTGGCAACACTGGAGATGGAAGCGGGTATGGTAATTTACCTACTGTTTTTTCAGTTAATCAATCTACTAATTTGTGGGTTGATACTGGGGCCAATGTCGCACGGGGTTCCACCGTCCTAATGGGGAATGGGTCACATGCTTCTGTTCATGGTGTTGGCACGGTAGATCTGAAGTTTACTTCGGGAAAGATCGTGCAGCTGAAGAACGTGCAGCATGTCCCTTCTATCGACAGGAATCTTGTTAGTGGCTCCCGTTTGACTAGAGACGGATTTAAGTTGGTTTTTGAGTCTAATAAAGTAGTCGTGTCTAAACATGGATATTTTATTGGTAAAGGTTATGAGTGCGGAGGCCTGTTCCGCTTTTCCCTTTCTGATTTCTGCAATAAGTCCGTGAACCATATTTGTGGCAGTGTGGATGATGAGGCTAATGTTTGGCATTCACGTTTATGTCATATTAATTTTGGCTTGATGTCTCGGCTTTCCAGCATGTGTTTAATTCCTAAGTTTTCCATTGTCAAAGGTTCTAAGTGCCATAGTTGTGTGCAATTGAAGCAACCTCGCAAGCCTCACAAGGCTGCCGAGGAGAGAAACTTGGCACCACTAGAACTCCTACATTCAGATCTTTGTGAAATGAATGGGGTGTTGACGAAGGGTGGAAAACGATATTTCATGACATTGATTGATGATGCTACTAGATTTTGCTATGTGTACTTGTTGAAAACGAAAGACGAGGCTCTAGACTATTTTAAAATTTATAAGGCAGAAGTTGAAAATCAACTTGACAGAAAGATAAAAAGGCTTAGGTCTGATCGTGGTGGAGAGTTTTTCTCGAACGAGTTTGACTTATTCTGTGAGGAACATGGCATCATACATGAGAGGACGCCTCCCTATTCTCCCGAGTCTAATGGGATTGCTGAAAGGAAGAACCGCACACTGACTGACTTGGTGAATGCCATGTTGGACACCGCGGGACTGCCTAAGGCATGGTGGGGGGAGGCATTGTTGACCTCAAATCATGTGTTAAACAGAGTTCCTAACAGAAATAAAGACAAAACACCATATGAGATATGGATTGGTAGAAAACCATCACTTTCTTATTTGCGCACATGGGGGTGCTTGGCGAAAGTCAATGTACCAATAACGAAGAAGCGCAAACTTGGACCTAAGACTGTGGACTGTGTTTTTCTGGGATATGCTCATCATAGCATTGCCTATAGATTTTTAATAGTTAAATCCGAGGTACCGGACATGCATGTTGGTACAATTATGGAGTCTCGTGATGCTACCTTCTTTGAGAGCTTTTTCCCAATGAAGGATACACATAGTGGTTCGAACCAACCCTCTGAAATAATTCCCAGTTCAATCACACCACCAGAACAAACTGAACATACACATGAACTTGTCTCTGAGGAGGATGTCAGTGAAGCTCCTCGAAGGAAAGCATATGCATCTCCTGATGCAGACTACTGGAAGGAGGCTGTCCGTAGTGAAATGGATTCCATTATCGCTAACGGGACTTGGGAGGTGACAGAGCGACCCTATGGGTGTAAACCTGTGGGGTGCAAGTGGGTGTTCAAGAAGAAGCTTAGGCCTGACGGTACTATTGAAAAGTATAAGGCTCGGCTTGTTGCTAAGGGCTATACTCAGAAAGAAGGCGAAGATTTCTTTGACACTTACTCACCTGTTGCTAGATTGACCACAATTCGTGTGCTACTTTCCCTTGCAGCCTCACATGGTCTTCTCGTTCATCAAATGGACGTTAAGACAGCTTTTCTTAATGGAGAGCTGGATGAGGAGATCTATATGGATCAACCTGATGGGTTTGTAGTTGAAGGTCAAGAAGGCAAAGTGTGTAAATTGTTGAAGTCTTTGTATGGTCTGAAACAAGCTCCTAAGCAATGGCATGAGAAATTTGACAAAACATTGACATCTGCAGGCTTTGCAGTCAATGAGGCAGATAAATGTATGTACTATCGCCATGGTGGGGGTGAGGGAGTTATTTTGTGCTTGTATGTTGACGACATACTGATATTTGGGACAAACCTTGAGGTGATAAATGAGGTTAAATCATTCTTGTCTCAAAATTTTGATATGAAAGATTTGGGAGTAGCTGATGTTATCTTAAACATTAAGCTAATTAGAGGTGAGAATGGGATTACACTCTTGCAGTCCCATTATGTGGAGAAGATCTTGAATCGCTTTGGCTACATTGATAGTAAGCCTTCTCCAACATCTTATGATCCTAGCTTGTTGCTTCGCAAGAACAAGAGAATTGCTAGGAATCAACTAGAATACTCCCAAATCATTGGCTCGTTGATGTACCTGGCTAGTGCAACTAGGCCTGATATCTCCTTTGCTGTGAGCAAGTTGAGCCGATTTACCTCTAATCCGGGAGATGATCACTGGCGTGCGCTTGAGCGAGTAATGCGCTATCTGAAAGGTACTGTGGAATTAGGGCTTCACTATACTGGGTATCCTGCGGTACTGGAGGGTTATAGTGATTCTAACTGGATCTCTGATGTGGATGAGATCAAAGCCACTAGTGGATATGTTTTCACACTGGGTGGTGGTGCTGTTTCATGGAGGTCTTGCAAACAGACCATTTTGACGAGGTCAACCATGGAAGCAGAGCTAACGGCACTGGATACTGCTACTGTTGAGGCAGAATGGCTGCGTGATCTATTAATGGATCTGCCTGTTGTTGAAAAACCGGTGCCGGCTATCCTTATGAACTGTGACAATCAAACGACATGTGAAAAGACGATTGAAGTCTGTCAGGAAATTAAGAAACTCCAGAGTTATAACGTTGGATTACATCCAAACAGCGAGAAACCTGGCAGATCCCTTCACGAAGGGACTATCACGAAATGTGATAAACAATGCATCGAAGGAGATGGGTTTGAGACCCATAGCATTCTTGAAAGAACTAACCTTTGTGAGCTTGACTGTTGGTCGCAGTCTATGAAGATTTTGGGTGAATCTTCTAGGAAGCTTACTAAAGACCTAGGAGTATGA
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| Protein seq | MRERVWEKGIPNPPHAPNSPNYPPSSSSVRTVVRLAFGFFEHLEQRTSGHQPQSEARIDPRCLSSYFYLMLEPHIFAVLECTSISQQLGIGMKNCKLGRMDIVRSNDRKRFGIVRYQYFEKENRVGFEMAGVFASMAIEWAIDKLYSLLPACLVSTPASSSSSAAPAESEDLEVLKRLERTMHRIHATLHDAEEQWNIREETAKLRLKELKKVAYDAEDVVDEYGYEMTRHKVEAFEQSARANRSGKRRREEMQPPFAVLFCCKFGFVFVLETFRKIRLNHYMSIISTIQKPYYRHCDFTMAGFADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPVGVLTAEQQKQFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTAFKYKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVRHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSVNQSTNLWVDTGANVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQLKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRKAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCMYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTSYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTTCEKTIEVCQEIKKLQSYNVGLHPNSEKPGRSLHEGTITKCDKQCIEGDGFETHSILERTNLCELDCWSQSMKILGESSRKLTKDLGV |
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| Function | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [UniProtKB/Swiss-Prot:P10978] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g30020 | LOC_Os11g30020.1 | Chr11 | 17456515 | 17464115 | - | MSU_osa1r7 | ||
| CDS seq | ATGAGGGAGAGGGTTTGGGAAAAGGGGATACCCAATCCCCCGCATGCCCCCAACTCACCTAATTATCCACCTTCTTCCTCCAGCGTGCGGACTGTGGTTCGGCTGGCCTTTGGATTCTTCGAGCACTTGGAGCAGAGAACCTCCGGACACCAGCCACAATCTGAGGCTCGCATCGATCCTCGGTGCCTCTCGTCATATTTTTATCTCATGTTAGAACCACATATTTTTGCTGTTCTGGAGTGTACCAGCATTTCACAGCAGTTGGGTATTGGAATGAAAAACTGTAAATTGGGAAGGATGGACATTGTTAGATCCAACGATCGAAAACGATTTGGTATCGTGAGGTACCAGTACTTCGAGAAGGAAAATCGGGTGGGTTTTGAGATGGCTGGAGTATTCGCCTCCATGGCTATCGAATGGGCGATCGACAAGCTCTATTCCTTGCTGCCAGCATGTCTGGTATCAACACCTGCATCGTCATCGTCTTCCGCAGCGCCAGCTGAAAGCGAGGACCTTGAGGTTCTGAAGAGGCTTGAGAGAACAATGCACAGGATCCATGCGACACTGCACGATGCAGAGGAACAGTGGAACATCAGGGAGGAAACAGCCAAGCTGCGGCTCAAGGAACTGAAGAAGGTGGCCTACGACGCGGAGGACGTGGTGGATGAGTACGGGTACGAGATGACACGCCATAAAGTGGAGGCATTTGAGCAATCTGCAAGGGCTAATCGCAGCGGCAAGCGCAGGCGCGAAGAGATGCAGCCTCCTTTTGCAGTTTTGTTTTGCTGCAAATTCGGATTCGTTTTTGTTTTGGAAACGTTCCGAAAAATCCGATTAAATCATTATATGTCTATAATCTCAACAATCCAAAAACCTTATTATAGGCACTGTGATTTTACTATGGCTGGTTTTGCTGATGCACTGAGGCCGGATAAATTCACCGGTGTGCATTTTAAGAGATGGCAGATCAGGGTCACTCTGTGGCTGACAGCTATGAAATGCTTCTGGGTGAGTACTGGCAAACCTGTAGGAGTTCTTACTGCTGAACAGCAGAAGCAATTCGAGGAAGCCACTACTCTCTTTGTGGGATGCATTCTTAGCGTTCTTGGCGATCGTCTGGTCGAGGTGTATATGCATATGACCGACGCTAAGGAGTTGTGGGATGCACTGAATACTAAATTCGGTGCTACTGATGCTAGCAATGATCTGTATATCATGGAGCAGTTTCATGACTACAAAATGGCTGACAACCGTTCTGTAGTCGAACAGGCTCATGAGATACAAACCATGGCTAAGGAACTCGAACTCCTTAAGTGTGTCTTACCCGACAAATTTGTGGCCGGGTGCATTATTGCAAAACTACCTCCATCTTGGAGGAGTTTCGGTACTGCATTCAAATACAAGAGACAGGAATACTCCGTTGAGGGGTTGATTGCGTCTCTTGATGTTGAGGAGAAAGCTCGGGAAAAAGATGCCGCGTCTAAGGGCGATGGTGGGCAGTCCAGTGCCAATGTTGTGCACAAGGCCCAGAACAAGAGCAAGGGGAAATACAAAGCTCAGCAGACCACCAACTTCAAGAAGCAGAAGAAGAACAACAACAATCCTAATCAGGATGAGAGGACTTGCTTTGTGTGTGGCCAAGTTCGTCATCTGGCTAGGAAGTGTCCACAGCGCAAGGGGATGAAGGCACCTGCAGGGCAGACTTCTAAGTCTGCTAATGTGACCATTGGCAACACTGGAGATGGAAGCGGGTATGGTAATTTACCTACTGTTTTTTCAGTTAATCAATCTACTAATTTGTGGGTTGATACTGGGGCCAATGTCGCACGGGGTTCCACCGTCCTAATGGGGAATGGGTCACATGCTTCTGTTCATGGTGTTGGCACGGTAGATCTGAAGTTTACTTCGGGAAAGATCGTGCAGCTGAAGAACGTGCAGCATGTCCCTTCTATCGACAGGAATCTTGTTAGTGGCTCCCGTTTGACTAGAGACGGATTTAAGTTGGTTTTTGAGTCTAATAAAGTAGTCGTGTCTAAACATGGATATTTTATTGGTAAAGGTTATGAGTGCGGAGGCCTGTTCCGCTTTTCCCTTTCTGATTTCTGCAATAAGTCCGTGAACCATATTTGTGGCAGTGTGGATGATGAGGCTAATGTTTGGCATTCACGTTTATGTCATATTAATTTTGGCTTGATGTCTCGGCTTTCCAGCATGTGTTTAATTCCTAAGTTTTCCATTGTCAAAGGTTCTAAGTGCCATAGTTGTGTGCAATTGAAGCAACCTCGCAAGCCTCACAAGGCTGCCGAGGAGAGAAACTTGGCACCACTAGAACTCCTACATTCAGATCTTTGTGAAATGAATGGGGTGTTGACGAAGGGTGGAAAACGATATTTCATGACATTGATTGATGATGCTACTAGATTTTGCTATGTGTACTTGTTGAAAACGAAAGACGAGGCTCTAGACTATTTTAAAATTTATAAGGCAGAAGTTGAAAATCAACTTGACAGAAAGATAAAAAGGCTTAGGTCTGATCGTGGTGGAGAGTTTTTCTCGAACGAGTTTGACTTATTCTGTGAGGAACATGGCATCATACATGAGAGGACGCCTCCCTATTCTCCCGAGTCTAATGGGATTGCTGAAAGGAAGAACCGCACACTGACTGACTTGGTGAATGCCATGTTGGACACCGCGGGACTGCCTAAGGCATGGTGGGGGGAGGCATTGTTGACCTCAAATCATGTGTTAAACAGAGTTCCTAACAGAAATAAAGACAAAACACCATATGAGATATGGATTGGTAGAAAACCATCACTTTCTTATTTGCGCACATGGGGGTGCTTGGCGAAAGTCAATGTACCAATAACGAAGAAGCGCAAACTTGGACCTAAGACTGTGGACTGTGTTTTTCTGGGATATGCTCATCATAGCATTGCCTATAGATTTTTAATAGTTAAATCCGAGGTACCGGACATGCATGTTGGTACAATTATGGAGTCTCGTGATGCTACCTTCTTTGAGAGCTTTTTCCCAATGAAGGATACACATAGTGGTTCGAACCAACCCTCTGAAATAATTCCCAGTTCAATCACACCACCAGAACAAACTGAACATACACATGAACTTGTCTCTGAGGAGGATGTCAGTGAAGCTCCTCGAAGGAAAGCATATGCATCTCCTGATGCAGACTACTGGAAGGAGGCTGTCCGTAGTGAAATGGATTCCATTATCGCTAACGGGACTTGGGAGGTGACAGAGCGACCCTATGGGTGTAAACCTGTGGGGTGCAAGTGGGTGTTCAAGAAGAAGCTTAGGCCTGACGGTACTATTGAAAAGTATAAGGCTCGGCTTGTTGCTAAGGGCTATACTCAGAAAGAAGGCGAAGATTTCTTTGACACTTACTCACCTGTTGCTAGATTGACCACAATTCGTGTGCTACTTTCCCTTGCAGCCTCACATGGTCTTCTCGTTCATCAAATGGACGTTAAGACAGCTTTTCTTAATGGAGAGCTGGATGAGGAGATCTATATGGATCAACCTGATGGGTTTGTAGTTGAAGGTCAAGAAGGCAAAGTGTGTAAATTGTTGAAGTCTTTGTATGGTCTGAAACAAGCTCCTAAGCAATGGCATGAGAAATTTGACAAAACATTGACATCTGCAGGCTTTGCAGTCAATGAGGCAGATAAATGTATGTACTATCGCCATGGTGGGGGTGAGGGAGTTATTTTGTGCTTGTATGTTGACGACATACTGATATTTGGGACAAACCTTGAGGTGATAAATGAGGTTAAATCATTCTTGTCTCAAAATTTTGATATGAAAGATTTGGGAGTAGCTGATGTTATCTTAAACATTAAGCTAATTAGAGGTGAGAATGGGATTACACTCTTGCAGTCCCATTATGTGGAGAAGATCTTGAATCGCTTTGGCTACATTGATAGTAAGCCTTCTCCAACATCTTATGATCCTAGCTTGTTGCTTCGCAAGAACAAGAGAATTGCTAGGAATCAACTAGAATACTCCCAAATCATTGGCTCGTTGATGTACCTGGCTAGTGCAACTAGGCCTGATATCTCCTTTGCTGTGAGCAAGTTGAGCCGATTTACCTCTAATCCGGGAGATGATCACTGGCGTGCGCTTGAGCGAGTAATGCGCTATCTGAAAGGTACTGTGGAATTAGGGCTTCACTATACTGGGTATCCTGCGGTACTGGAGGGTTATAGTGATTCTAACTGGATCTCTGATGTGGATGAGATCAAAGCCACTAGTGGATATGTTTTCACACTGGGTGGTGGTGCTGTTTCATGGAGGTCTTGCAAACAGACCATTTTGACGAGGTCAACCATGGAAGCAGAGCTAACGGCACTGGATACTGCTACTGTTGAGGCAGAATGGCTGCGTGATCTATTAATGGATCTGCCTGTTGTTGAAAAACCGGTGCCGGCTATCCTTATGAACTGTGACAATCAAACGACATGTGAAAAGACGATTGAAGTCTGTCAGGAAATTAAGAAACTCCAGAGTTATAACGTTGGATTACATCCAAACAGCGAGAAACCTGGCAGATCCCTTCACGAAGGGACTATCACGAAATGTGATAAACAATGCATCGAAGGAGATGGGTTTGAGACCCATAGCATTCTTGAAAGAACTAACCTTTGTGAGCTTGACTGTTGGTCGCAGTCTATGAAGATTTTGGGTGAATCTTCTAGGAAGCTTACTAAAGACCTAGGAGTATGA
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| Protein seq | MRERVWEKGIPNPPHAPNSPNYPPSSSSVRTVVRLAFGFFEHLEQRTSGHQPQSEARIDPRCLSSYFYLMLEPHIFAVLECTSISQQLGIGMKNCKLGRMDIVRSNDRKRFGIVRYQYFEKENRVGFEMAGVFASMAIEWAIDKLYSLLPACLVSTPASSSSSAAPAESEDLEVLKRLERTMHRIHATLHDAEEQWNIREETAKLRLKELKKVAYDAEDVVDEYGYEMTRHKVEAFEQSARANRSGKRRREEMQPPFAVLFCCKFGFVFVLETFRKIRLNHYMSIISTIQKPYYRHCDFTMAGFADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTGKPVGVLTAEQQKQFEEATTLFVGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVVEQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTAFKYKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVRHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFSVNQSTNLWVDTGANVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDEANVWHSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQLKQPRKPHKAAEERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRKAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCMYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTSYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTTCEKTIEVCQEIKKLQSYNVGLHPNSEKPGRSLHEGTITKCDKQCIEGDGFETHSILERTNLCELDCWSQSMKILGESSRKLTKDLGV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0492100 | SBH | 0.452033 | 0.992897 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g29950 | RBH | 0.062857 | 0.085481 | 0.038987 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0492100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0014620 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0014500 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0014450 | SBH | 0.0 | 1.391383 | 0.505034 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014200 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0014530 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0293900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0014780 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0350000 | SBH | 0 | 0.032661 | 0.001737 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0014770 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0014730 | SBH | 0.384812 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014410 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014180 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0014550 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014310 | SBH | 0.0 | 3.946732 | 0.266399 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0014360 | SBH | 0.000000 | 0.0 | 0.0 |
