Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os09g32870 | OGI:09057210 | 12/16 | Nipponbare | IRGSP 1.0 | MSU | Chr09:19594270-19597668 | ||||||||
| Gene Symbol | OsFbox497, Os_F0433 | ||||||||||
| DNA seq | ATGAGGAGGACGACAAGCGACGACGAAGCCTTGCCTCGCTGCTCGCCGCCGCCTCGCCCACGCCGCTGCCGCGCCCGACCGCCGCCACCCGTTGGTGAAGAGGCGGCGCTGGCGGTTGCGGACGGTGACGGCGCGGCCCTCGGCGAGGACGTGGGGGAGGTAGGCGTTCTCGACGAGGTGGTGGAAGGTGTGGCGGTGGTGGAAGGTGAGGCGGTGGCGCCGCAGAAGTCGTCGGCGACAGCCCCGTGGTCGTCGACGGTGAGGGCCATGCGGTCAGCGCCCTCGGCGACGTCTTGACGGCCGCCTCACTGCTCGCCGTCGCGCCCGGCCGCCGCCTCGCCCAGGCAGCCGCCGTGCCCGACTGCCGCCTCGCCCAGGCAGCCGCCGTGCCCGACTGCCGCATCGCCCAGCCGCCGCCTCGGCCCGGCGGCCGCCTCGCCCAGCCGCCACCACGCCCGACCGCCGCCTCACGCCCAACCACCGGCCTCGGCCCGGTGGCCGCCTCGCCCGGCCACCACCTCGGCCTGGCCCCCGCCTCACCTAGGCCGCCGCCGCGCCCGAGCGCCGCCACCTCGCCCCAGCCAGTTGAGGGAGTGGTTGAGGGAGAAGAGATAAGGTATAGAGAGAGGGTTGAGGGAGGCTGAGAGAGAGGACGGGATAAAAGAAGAGATAAGGTAGAGAGAAAGGGGAGTGATTGAGAGGGAATAAAGGGGAAAAAGGAAGAGAGAGATAGGAAAAATTTGAAGTGGGTGTGAGGGAAAGGAGGGAGGAATATCCCGTGTGGTTGGATTAGGACGTCCGCACCGGAAAATCAATTTTCCCGTGCGGGCGACACCCTAGCGCCGGTTCCCTATTTTTCCGTGTGGTTCCACTTATGGACCGCATGGAAACAAAAAGGGGGGCATCCAGTAAAATCAATCGTGCAGTAGTGCGATGAGCAATGTTTATTTTGACTGTCATCATCCATGCACTAAAAAAAATATGAGATCGACTTTAGGTGTGAAAAGATAGATATTTGCTCCGGTCTAGCAAAAAGTATATCGAGTTACCGGTACCTCATGATATCAAATCATTTTTGATCGTTAGATCTAGTTAGGTAGGATTGGCATTGTTAGATCCAAGAGATTTGCTCCGTTCCAACGATTAAAAACGATTTGATGTCTCACGGTACCGGTAGCTCGATGTACTTTTTATTGGATCGGAGCAAATCTCCCAAAGATAACATGGGAGCCTCCGTGCCTAGTTTTACTGTAGTATGGGTTGTATGGGGGTAAATATGGGGTTAAGTTGGGAGGAACTAGGAAGGAGTGCAATGTCTCCATGGGGGAACCGATGAAGCTAAGCACCCATAAAACTATATTGCATTTGTTGCTTCCAATGACCAATATAAGCAAGAACTTGACACAGTTCACTACTTTTTTCTATTGAAGCAAGAGATTACTAGTACCCTGCTTTGGTTGAAAGCATATAAGGAGGTTTTGGGTATAGGACAGCTGTTAAGGACACCACCTTACTATTTTATTTCCCTGTTCATGTCTGTACATAACCATGCCTGATGTATCTGCAGACGGTTCGATTGATTCAGCGGCTAAAAGAAAGGGATCACTCTGTCAACAAGTTGCAAATTCTGAAGGCAACAAAAAAACAAGATATTCAGGGCTAGACCTTCCAGAGGTATGTCACCAAAAGCCGACAATGGAAGACTCTAAGTAGCCTCTAAGATATTAGAAGTGAGGATTCACTATGAGTCTATGACTGCTAGTAGCCTCTAACTGTGCACACCGGTGGTCCTATGTCAGTATGTCACCTAGATAAAATTTTGTGAATGGATCTTTAGTGCTCCTATGCCTTATAAGCTACTAGTATTGTTTTCTCTTCCAATAGAACCAGTTGTTTACCTTCACAATAGTTTGTTTTTTAATCTTTTATCCTTGCTTGTGCATGCAGGAAATCTGGTGCCATATACACTCCCTAATGGCATTCAAAGATGCCGCCCGTGCTACATGTGTGTCTCGTGCTTTTCATCGTTCCTGGCAATGCCATCCCAATCTTATATTTTGTATTGGAATACTGGGCTCGGATTTCATCAACAAATTTGATCGCATTGTGAAAAACCACTCAGGCATTGGCATCAAGTCGGTAAACTTTGAATATGATAGTTCTTACAATACTAGAAGGAGCACTAGCATCAGCCATCATTTTGATAGTTGGCTTCATATTGCTATTACACCATGGATCGAAAAACTCTCCCTTAGGCTATCTCATTATTCATAAAATGTGGAGTACAACTTACCATGCACAATTCTGTCTGATGGGAGAGCAAGCTCAATGCGACATCTTTATCTTGGCAGTTGTAGCTTCCATCCCACAATCAACCTTGACTTGAGAAGCCTGATGAAGTTGCATCTGTTTAATGTCCATATTACAGGAGATGAGTTAGGGTGCCTTCTCTTCAGTTGTTATGCTTTGGAGTGGTTGGAACTTGAGCATTGTGATGAAATAGTTTGCATGAAGGTACCTTGTCAGTTGCAACGCCTCAATCACCTGAAAGTGTTTGAATGCAGAATGCTGCAAGTAATAGAGAATAAGGCTCCAAATATTTGCAGTTTTGATTTTGGAGGTAAACACGTACAACTCTTGCTTGGTGAATCGTTGCAGATGAAGACACTATCTTTGCAATACTATTGCAACGCTGTCTATTATGCTCGTGTAGAGTCTATACCCAATGTGCCAAATCTTGAAACTCTCACCATTTGCTCGTATCACGAGGTACACTCAAAAACTCGAAAATACACTTGCGGTATTCATATAACAATACTTACACATTAGAAGAATGTCTCCAGTCTGATGATCATCATATTTATGCAGATGGTTAACACACCAATGTTGCCTAGCAAATTCCTCCATCTCAAGTGTTTGACTATCGATCTTGCTGAAGTTTCCCATGCATATGATTATTTCTCTCTAGTTTCTTTTCTTGATGCTTCTCCTTTCTTGGAGACTTTACTTCTGGGTGTAAGATAATTTTCATTCTGCAAAGTTATCTAGTGTCTATGGTAGTAACCATCAATTAAAGTATATTTGGCTTTTCATCTCCAGATACCAAAGGACAGCATGGAGGATGACTCAATTTTTGGAGATTCCTCAAATATGAGGCAGATGCAAGAATATCGTCATGACAACCTCCAGAGTGTGGTGATCACTTGTTTCTGCTCCGCGAAGAGCTTGATCGAGCTAACATGTTGTATTCTTGACTGTACAACGTCACTTGAGTACCTTACACTGGATACTACTCGTGGTGTTTATAGCTGTTCTACAGGTAAACACAGCCAATGCTTTCCTATGGACAAGGCCATGATCCCTAAAGCCAACAGGGCTATGTTGGCTATCGAAACATAA
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| CDS seq | ATGAGGAGGACGACAAGCGACGACGAAGCCTTGCCTCGCTGCTCGCCGCCGCCTCGCCCACGCCGCTGCCGCGCCCGACCGCCGCCACCCGTTGGTGAAGAGGCGGCGCTGGCGGTTGCGGACGGTGACGGCGCGGCCCTCGGCGAGGACGTGGGGGAGGTAGGCGTTCTCGACGAGGTGGTGGAAGGTGTGGCGGTGGTGGAAGACGGTTCGATTGATTCAGCGGCTAAAAGAAAGGGATCACTCTGTCAACAAGTTGCAAATTCTGAAGGCAACAAAAAAACAAGATATTCAGGGCTAGACCTTCCAGAGGAAATCTGGTGCCATATACACTCCCTAATGGCATTCAAAGATGCCGCCCGTGCTACATGTGTGTCTCGTGCTTTTCATCGTTCCTGGCAATGCCATCCCAATCTTATATTTTGTATTGGAATACTGGGCTCGGATTTCATCAACAAATTTGATCGCATTGTGAAAAACCACTCAGGCATTGGCATCAAGTCGATGAAGACACTATCTTTGCAATACTATTGCAACGCTGTCTATTATGCTCGTGTAGAGTCTATACCCAATGTGCCAAATCTTGAAACTCTCACCATTTGCTCGTATCACGAGATACCAAAGGACAGCATGGAGGATGACTCAATTTTTGGAGATTCCTCAAATATGAGGCAGATGCAAGAATATCGTCATGACAACCTCCAGAGTGTGGTGATCACTTGTTTCTGCTCCGCGAAGAGCTTGATCGAGCTAACATGTTGTATTCTTGACTGTACAACGTCACTTGAGTACCTTACACTGGATACTACTCGTGGTGTTTATAGCTGTTCTACAGGTAAACACAGCCAATGCTTTCCTATGGACAAGGCCATGATCCCTAAAGCCAACAGGGCTATGTTGGCTATCGAAACATAA
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| Protein seq | MRRTTSDDEALPRCSPPPRPRRCRARPPPPVGEEAALAVADGDGAALGEDVGEVGVLDEVVEGVAVVEDGSIDSAAKRKGSLCQQVANSEGNKKTRYSGLDLPEEIWCHIHSLMAFKDAARATCVSRAFHRSWQCHPNLIFCIGILGSDFINKFDRIVKNHSGIGIKSMKTLSLQYYCNAVYYARVESIPNVPNLETLTICSYHEIPKDSMEDDSIFGDSSNMRQMQEYRHDNLQSVVITCFCSAKSLIELTCCILDCTTSLEYLTLDTTRGVYSCSTGKHSQCFPMDKAMIPKANRAMLAIET |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g32870 | LOC_Os09g32870.1 | Chr09 | 19594270 | 19597668 | + | MSU_osa1r7 | ||
| CDS seq | ATGAGGAGGACGACAAGCGACGACGAAGCCTTGCCTCGCTGCTCGCCGCCGCCTCGCCCACGCCGCTGCCGCGCCCGACCGCCGCCACCCGTTGGTGAAGAGGCGGCGCTGGCGGTTGCGGACGGTGACGGCGCGGCCCTCGGCGAGGACGTGGGGGAGGTAGGCGTTCTCGACGAGGTGGTGGAAGGTGTGGCGGTGGTGGAAGACGGTTCGATTGATTCAGCGGCTAAAAGAAAGGGATCACTCTGTCAACAAGTTGCAAATTCTGAAGGCAACAAAAAAACAAGATATTCAGGGCTAGACCTTCCAGAGGAAATCTGGTGCCATATACACTCCCTAATGGCATTCAAAGATGCCGCCCGTGCTACATGTGTGTCTCGTGCTTTTCATCGTTCCTGGCAATGCCATCCCAATCTTATATTTTGTATTGGAATACTGGGCTCGGATTTCATCAACAAATTTGATCGCATTGTGAAAAACCACTCAGGCATTGGCATCAAGTCGATGAAGACACTATCTTTGCAATACTATTGCAACGCTGTCTATTATGCTCGTGTAGAGTCTATACCCAATGTGCCAAATCTTGAAACTCTCACCATTTGCTCGTATCACGAGATACCAAAGGACAGCATGGAGGATGACTCAATTTTTGGAGATTCCTCAAATATGAGGCAGATGCAAGAATATCGTCATGACAACCTCCAGAGTGTGGTGATCACTTGTTTCTGCTCCGCGAAGAGCTTGATCGAGCTAACATGTTGTATTCTTGACTGTACAACGTCACTTGAGTACCTTACACTGGATACTACTCGTGGTGTTTATAGCTGTTCTACAGGTAAACACAGCCAATGCTTTCCTATGGACAAGGCCATGATCCCTAAAGCCAACAGGGCTATGTTGGCTATCGAAACATAA
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| Protein seq | MRRTTSDDEALPRCSPPPRPRRCRARPPPPVGEEAALAVADGDGAALGEDVGEVGVLDEVVEGVAVVEDGSIDSAAKRKGSLCQQVANSEGNKKTRYSGLDLPEEIWCHIHSLMAFKDAARATCVSRAFHRSWQCHPNLIFCIGILGSDFINKFDRIVKNHSGIGIKSMKTLSLQYYCNAVYYARVESIPNVPNLETLTICSYHEIPKDSMEDDSIFGDSSNMRQMQEYRHDNLQSVVITCFCSAKSLIELTCCILDCTTSLEYLTLDTTRGVYSCSTGKHSQCFPMDKAMIPKANRAMLAIET
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.237647 | 1.495693 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0506450 | SBH | 2.165931 | 1.790363 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0506450 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0015830 | RBH | 1.459108 | 0.0 | 1.297721 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0015840 | RBH | 0.123706 | 0.000000 | 0.658371 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0016060 | SBH | 0.942915 | 0.0 | 1.215180 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0015830 | RBH | 0.142468 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0015960 | SBH | 2.206522 | 0.0 | 4.207196 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0328200 | SBH | 3.0529705 | 0.8424045 | 0.880403 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0015820 | SBH | 0.042507 | 0.0 | 0.245926 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0317600 | RBH | 3.4892675 | 5.228813 | 2.8189875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0015800 | SBH | 0.027323 | 0.039906 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0015440 | SBH | 0.265119 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0015730 | SBH | 1.076460 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0015590 | SBH | 0.198579 | 0.0 | 0.105989 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0015480 | SBH | 0.147261 | 0.690092 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G015880 | SBH | 0.122106 | 0.875533 | 1.501507 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0015670 | SBH | 0.489735 | 2.735040 | 3.352199 |
