Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g45720 | OGI:07070280 | 3/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:27295884-27298682 | ||||||||
| Gene Symbol | BLE2, OsBLE2 | ||||||||||
| DNA seq | ATGGCCGTGCTCGCCCTCCTCTCCACCGGCCTCTCCCTCTCCCTCTCCCGCGCGGACCTCGTTGCCGTCGTCATCGCCAAGCCGCGGCTGCTCTGCGCGAAGGCTGACACCATCGCCGCCAGCGCTCGGTTGGGTCATCCCGTCTGTCGTCGTCGCGCTCCTCCGCCCGCTCGTCTGTGATGCCGACACCGTCATCTCCTCGGTGCGTGTGACCCAGGCCCCGACCAGCCCAAGCTCATCGACGCCATCAAGGAGGCCGGCGACGACCACGTCCGGAGGTGAGGGCAGAGGCGGCGTCGGCCATGTTTGTTGTAAACGGCGTTATCGGTGGTTGCAAACAGCGCTCATCCCATCCCTCCCTCGTCCCTTCAACCAAACAAAAAACTGGGATCGTCCTATTCTACAAACCAAACACCCGAATGGAATCATCCCAATCCTAAAATCAGGGATGGTTTCATCCCATCCCACCTAGTCCCAGAACCAAACACACGCTAAGATTTCAAGCGTTTCAAACTTGTAGTGTGAAACTAACTTTTGATAATCAAATAATTGGCTCCTATGCGCCTTTTTGTTTTTATGGTATGGTACCTTCTACTACCATGTGTAGTAGTGTAGTAAATTTTAAATCTAACTATATATTTTCATAAGTATATAAAATATTTTATTTGAAGCTTTAGTAAAATATATTTACCAATTCATCTATTTTAATATGGTATATGATACACGAATTTATTGTAATGTTATATATATTATTTCTAATTTTACCCCTATATAATTTCTACTACACTACTACCGGGTGTAGTACAATAAAATCAAATCCATTGAATCTGAAGCGATTAAAGGCTCATAATCATTTGAGGGTACCTTAAAATTCCGTCTTTAAGGCCCTCATTAGATCCCACCTCAAAATTTTACACTCTGCCACATCGAATGTTTGAACACCTGCATGAAGTATTAAATATAGGCTAAAAATAACTAATTGCACAGATTGCGACTAATTTGCGAGACGACTCTTTTAAGCCTAATTGCTCCATGATTTGACAATGTGATGCTACAGTAAACATTTGCTAATGACGGATATAATATCTGATGTGACACGCCCAAACTTTACAATATCTAAACACCCCCTCAATTCCCTTCTGTTTAATGATTAAACAATATGACTACTTTCAGGATATTCACCCGCAACAATAGGCTGGATTATCAACTGTTCTTCCGGACGAGAGGTGCCTTTAGACGACTGGGCTGGAACGGGCTGATGGTAATCGTGTGCTTCTCCATTTCTGTGGAGATTATGGGTACCCTATACCCACACGGCATGGTTATCCGACTAGTTATAGGGGATAACTTATATGTATGGAATATGTAACAGATCATGACTTGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGCACATATTGTCGCGACCGGGAAAATTGCCTTTTCCCGAACGCTAATGTATTAATCCCCGTCCCAGGAAAAGCCGGGGTACACCATACAAACATGATATAAAAGACACATCTTCATTATATCGATAATATTTACATTATTACAAAGGCGCTTCAGGCCTGACAAACAAAAATAAACAGCAGCGGACTAGCGGGCCTACGGCTCCATCTTCACAGGCGCTCAACTGGGGTATAAGCCAGGACTCCACCTAAGACTTCTTTTCCAAAGCTTCTCTTACTGAAGGGGGGAGAAAGATAGAGCAAGAATGAGTACAACCACAGTACTCAGCAAGCCACACCGGAGATGCACAATTAATGCAAGGGAGTACAAGGGGATAATAACATAGAGGTTAAGTTTTGCAGTAAACAGCATTTAAAAGTCACTTAGTTGCCCAAAGCCATTTTATAAAGACGATCCTAGAGCTACACAGTATTATTAATCAAGGCCGTGAACCCTCACGAACCTGCCTTAACCCAAGGCCTACGATGATTCAGACCGAACTGGCAACCCGACCCTGGGTCCCAGCTCGTCCCAAGCCAAACCAGGCCGACCATTCCATATTTTAGTTGTTGAGCAAATTTTAAGAATTATAACACTGACTTGGGTACATTGCTCGGCTTGCCCATAACCGAGGGCGCGGCTATTCGAATAGATTATACTCTGATCAGAGGTGTACATCTTTACCCACAAGACACATCTTCCTCACGTGTAACCACGTGCCACATACCACCACGGTATACGGACGGAAGACGTGACATAGTTTCCAACCCATCCTAGCCATAGACAAGAGTACCGACCCAATCCTGCCTACGGCCGGAACCCCCGGGACAGGCAGGCAAGACTGAGCCCCTAGCAGCAGGGCACCAACCCTCTGCCAATGACATCTCGACTACCGGGCCGCAGCTCGTGTAGCCTTCATTTGCCCTGGAGAATGTCCATCGACCCCCGACTTCATCCATCTCCAATCCGTGTACTTTTGTTTATAACCAGACTGAGCCACAAACTAAGCCTTACCCACTAGACATGTGGAAGTACGGTAGTGCTTTGCAACAGAGGCCCGAGCTTAATCCTTATAGTGGCCGGGGTGCTACTTCCCACAACTGGCATGCACCCAAACCCCACCGAAAACAGGTTTTAGGGGTTTTGAAAGAGGAAGAGAGGTGTATATCCAATTCCACCATAAACCAACAATTCCATAGTGTCCAAATGATATGA
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| CDS seq | ATGGCCGTGCTCGCCCTCCTCTCCACCGGCCTCTCCCTCTCCCTCTCCCGCGCGGACCTCGTTGCCGTCGTCATCGCCAAGCCGCGGCTGCTCTGCGCGAAGGCTGACACCATCGCCGCCAGCGCTCGGATATTCACCCGCAACAATAGGCTGGATTATCAACTGTTCTTCCGGACGAGAGGTGCCTTTAGACGACTGGGCTGGAACGGGCTGATGACTGAGCCACAAACTAAGCCTTACCCACTAGACATGTGGAAGTACGGTAGTGCTTTGCAACAGAGGCCCGAGCTTAATCCTTATAGTGGCCGGGGTGCTACTTCCCACAACTGGCATGCACCCAAACCCCACCGAAAACAGGTTTTAGGGGTTTTGAAAGAGGAAGAGAGGTGTATATCCAATTCCACCATAAACCAACAATTCCATAGTGTCCAAATGATATGA
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| Protein seq | MAVLALLSTGLSLSLSRADLVAVVIAKPRLLCAKADTIAASARIFTRNNRLDYQLFFRTRGAFRRLGWNGLMTEPQTKPYPLDMWKYGSALQQRPELNPYSGRGATSHNWHAPKPHRKQVLGVLKEEERCISNSTINQQFHSVQMI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g45720 | LOC_Os07g45720.1 | Chr07 | 27295884 | 27298682 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCCGTGCTCGCCCTCCTCTCCACCGGCCTCTCCCTCTCCCTCTCCCGCGCGGACCTCGTTGCCGTCGTCATCGCCAAGCCGCGGCTGCTCTGCGCGAAGGCTGACACCATCGCCGCCAGCGCTCGGATATTCACCCGCAACAATAGGCTGGATTATCAACTGTTCTTCCGGACGAGAGGTGCCTTTAGACGACTGGGCTGGAACGGGCTGATGACTGAGCCACAAACTAAGCCTTACCCACTAGACATGTGGAAGTACGGTAGTGCTTTGCAACAGAGGCCCGAGCTTAATCCTTATAGTGGCCGGGGTGCTACTTCCCACAACTGGCATGCACCCAAACCCCACCGAAAACAGGTTTTAGGGGTTTTGAAAGAGGAAGAGAGGTGTATATCCAATTCCACCATAAACCAACAATTCCATAGTGTCCAAATGATATGA
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| Protein seq | MAVLALLSTGLSLSLSRADLVAVVIAKPRLLCAKADTIAASARIFTRNNRLDYQLFFRTRGAFRRLGWNGLMTEPQTKPYPLDMWKYGSALQQRPELNPYSGRGATSHNWHAPKPHRKQVLGVLKEEERCISNSTINQQFHSVQMI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0650600 | SBH | 13.083922 | 12.544655 | 15.036459 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g11090 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0650600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025790 | SBH | 1.142522 | 3.499882 | 1.437020 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025840 | SBH | 0.757720 | 0.334601 | 1.334512 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025560 | SBH | 0.049186 | 0.537736 | 0.329784 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0425000 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025740 | SBH | 0.0 | 2.229766 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0026120 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025510 | SBH | 1.848419 | 0.0 | 0.735492 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
