Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g36760 | OGI:07061710 | 2/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:22024801-22027091 | ||||||||
| Gene Symbol | SDRLK-41 | ||||||||||
| DNA seq | CTATGAGTAGCTGGCAGGATCATATTCTTCCACAAGGTTTTGTAGAAATGCCGGTATTGGGGGCAACACGACATCTCGAGTGCCCTGCAAGATATGAACTATCTGCTGCATTGTTGGTCTATGAGCCTCGTTGTCCTGAATGCACCAACATGCAACCTTGCATGCTCTCTCCAGCTCTTGAACATTCGTGTCATGCATTCTATGATCAAATACTTCAGAAATGTCACCATTGCTTATCCTGACTGCAGCCCAGACAGGAAAGTACTTTATAGTTTTACTCTCCATCAATTCTGTGTTCCTTTTGCCTGAAATTATCTCAAACAACATCATTCCATAGCTGTAGACATCTGCTTTTGACGTGATGGGAAGACCTGCGATCCATTCCGGTGCAAGATATCCTATTGTTCCTCTCATAGTTGTTAGTGCCCGACTAAAATTCCGATCCATAAGCTTAGCAAGACCGAAATCTGCCACTTTTGGGCTGAAGTCCGCATCAACAAGTACATTTTCTGGTTTTATATCACAATGTATGATGCATTCATGGCATTCCTCATGGAGATAATGTAATCCTTTTGCAACACCTAGAATAACTTGGAATCTTGTGTACCAGTCCAACACCTTCACATTATTAAAAAGGTGACAATCTAGAGAACCATTTGTTGGCAACTTTTTTGACAAGTCGACGAGCACGATCGCAACACCTAAACGCCTTGCGGTGATATGGAGTCGCCAACCACCTCGATCTAGCCAAAGGGCCAAATTAAGATGGGTTTCGGAGAAAAACAACTAAGGCCCTCTTTGTTTAGGCTTATAAGCCAACTTATAAGTCGAAAAGTCTAAGCCAAAACAAACAAGCAGCTTTTTCATTTGGCTTTTTTAAGCCATAAGCCACTCTAACACTATTAAGCCAAAAGCTAGGTTGGAGAAGCTTTTTTTGGCTTATATGAGATAGATGTATGACTCTACCATTAAACTTAGGACATTAAATCCACTGGCTTATAAATCATATAAGCCAATAAGCTGACTTAAAAGTCTAGGCCAATAAGCCTAAGCCTAAACAAAGAGGGCCTAAACCGGCTAGCGGAGCCGATTTAGAGATCAAAATCAGCCTCTAGGCCGATTTAGATCGATATGAGGATAACTACCCGTCTCGTGGGCAAAACGGAAGGTTTTCAGGACAAACCTACAAAGAGGTGTCGCACTCTCGCAGCGGCGGCGGACGGTTTACAGCGCAAACCGACAAAGATGGACTAAACTAGGGTAAAATAGAAAACATAGTAAAAGAACGATTCAAGTAAATTGTATTCGGGGGTTTTACAATGAACCGGCGGCCTTGTCCCTTAAATAGGGGGTTGGTCTTGCCCTCTACAGGCCCTTCTCCACGTCCAACTCGGGATAGAAACTAAAGGAAACACGAAACATGCCTTCCCGAGCAAGGAAACCTGAGACCCGACGAAAACAGACTCGGACTCGGACCCTGCCGGTCTGACCGCCTACATACCTGCGGTCAGACCGGCCCTACTAGCCGGTCAGACCGCCCACACACCTGTAGTCTGACCGCCCTGTGAAGGAAACCTGTCACTTTCCAAACTTTGGCAATCTTCCCCTATTTCGTCCATAGGTGCCAAATTTGGGTGTAAACACATGCCCCCCTGCCTTTTTGGTGAACATACGTGAACCTAAAAGCATAGAACATGTTATCTCAGGGCGATAATCCAATTACTGGCCATAGGACTTCCTAAGCATCTTGCCAAATGCTCGGGAAGCATTTCTTCAAGTATTTCCCATTAATTGATATCTGAAAACACCATCTTGAAGTGTCTTCATCTCCTTCAAAGTCTTCAAACGCTCGTCGATGACATCTTCAAAAATTGCTTCCCATCAAGGTCTTATAATCTTCAACCGACAAGTCGTCTTGCTTGAAATACCGAAGAGAGCCAAGATTTACCTCAACTGGCAAAACGGCAATTTCAACAATGTTTTATTACTCGACTCGGCTTATCCATTAACCTGAGTGTAAGAACTCAACAACTTAATATCATAAGATTCGGCAATACTTCTCACTTCCTTGGACATAAAAGAAGCTCCTTTAACGTTTGAGGAATACCGAATCTATGAACAATATGCTTCAAAATAGAGTCAATTACCTCCGTACAAGTAATATTCTCGAGCGGCACGGCTTCGGCCCACTTAGTAAGTAATCCATTGCAACTAGCACGAACCAATGCTCTTTTGATGACGAAGAATAAATTTGACCAATGAAATCCAAAGCCCAACCTCGGAACGGCCAT
More
|
||||||||||
| CDS seq | ATGGCCGTTCCGAGGTTGGGCTTTGGATTTCATTGGTCAAATTTATTCTTCGTCATCAAAAGAGCATTGGTTCGTGCTAGTTGCAATGGATTACTTACTAAGTGGGCCGAAGCCGTGCCGCTCGAGAATATTACTTGTACGGAGGTTCACGTATGTTCACCAAAAAGGCAGGGGGGCATGTGTTTACACCCAAATTTGGCACCTATGGACGAAATAGGGGAAGATTGCCAAAGTTTGGAAAGTGACAGGTTTCCTTCACAGGGCGGTCAGACTACAGATCGAGGTGGTTGGCGACTCCATATCACCGCAAGGCGTTTAGGTGTTGCGATCGTGCTCGTCGACTTGTCAAAAAAGTTGCCAACAAATGGTTCTCTAGATTGTCACCTTTTTAATAATGTGAAGGTGTTGGACTGGTACACAAGATTCCAAGTTATTCTAGGTGTTGCAAAAGGATTACATTATCTCCATGAGGAATGCCATGAATGCATCATACATTGTGATATAAAACCAGAAAATGTACTTGTTGATGCGGACTTCAGCCCAAAAGTGGCAGATTTCGGTCTTGCTAAGCTTATGGATCGGAATTTTAGTCGGGCACTAACAACTATGAGAGGAACAATAGGATATCTTGCACCGGAATGGATCGCAGGTCTTCCCATCACGTCAAAAGCAGATGTCTACAGCTATGGAATGATGTTGTTTGAGATAATTTCAGGCAAAAGGAACACAGAATTGATGGAGAGTAAAACTATAAAGTACTTTCCTGTCTGGGCTGCAGTCAGGATAAGCAATGGTGACATTTCTGAAGTATTTGATCATAGAATGCATGACACGAATGTTCAAGAGCTGGAGAGAGCATGCAAGGTTGCATGTTGGTGCATTCAGGACAACGAGGCTCATAGACCAACAATGCAGCAGATAGTTCATATCTTGCAGGGCACTCGAGATGTCGTGTTGCCCCCAATACCGGCATTTCTACAAAACCTTGTGGAAGAATATGATCCTGCCAGCTACTCATAG
More
|
||||||||||
| Protein seq | MAVPRLGFGFHWSNLFFVIKRALVRASCNGLLTKWAEAVPLENITCTEVHVCSPKRQGGMCLHPNLAPMDEIGEDCQSLESDRFPSQGGQTTDRGGWRLHITARRLGVAIVLVDLSKKLPTNGSLDCHLFNNVKVLDWYTRFQVILGVAKGLHYLHEECHECIIHCDIKPENVLVDADFSPKVADFGLAKLMDRNFSRALTTMRGTIGYLAPEWIAGLPITSKADVYSYGMMLFEIISGKRNTELMESKTIKYFPVWAAVRISNGDISEVFDHRMHDTNVQELERACKVACWCIQDNEAHRPTMQQIVHILQGTRDVVLPPIPAFLQNLVEEYDPASYS |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g36760 | LOC_Os07g36760.1 | Chr07 | 22024801 | 22027091 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCCGTTCCGAGGTTGGGCTTTGGATTTCATTGGTCAAATTTATTCTTCGTCATCAAAAGAGCATTGGTTCGTGCTAGTTGCAATGGATTACTTACTAAGTGGGCCGAAGCCGTGCCGCTCGAGAATATTACTTGTACGGAGGTTCACGTATGTTCACCAAAAAGGCAGGGGGGCATGTGTTTACACCCAAATTTGGCACCTATGGACGAAATAGGGGAAGATTGCCAAAGTTTGGAAAGTGACAGGTTTCCTTCACAGGGCGGTCAGACTACAGATCGAGGTGGTTGGCGACTCCATATCACCGCAAGGCGTTTAGGTGTTGCGATCGTGCTCGTCGACTTGTCAAAAAAGTTGCCAACAAATGGTTCTCTAGATTGTCACCTTTTTAATAATGTGAAGGTGTTGGACTGGTACACAAGATTCCAAGTTATTCTAGGTGTTGCAAAAGGATTACATTATCTCCATGAGGAATGCCATGAATGCATCATACATTGTGATATAAAACCAGAAAATGTACTTGTTGATGCGGACTTCAGCCCAAAAGTGGCAGATTTCGGTCTTGCTAAGCTTATGGATCGGAATTTTAGTCGGGCACTAACAACTATGAGAGGAACAATAGGATATCTTGCACCGGAATGGATCGCAGGTCTTCCCATCACGTCAAAAGCAGATGTCTACAGCTATGGAATGATGTTGTTTGAGATAATTTCAGGCAAAAGGAACACAGAATTGATGGAGAGTAAAACTATAAAGTACTTTCCTGTCTGGGCTGCAGTCAGGATAAGCAATGGTGACATTTCTGAAGTATTTGATCATAGAATGCATGACACGAATGTTCAAGAGCTGGAGAGAGCATGCAAGGTTGCATGTTGGTGCATTCAGGACAACGAGGCTCATAGACCAACAATGCAGCAGATAGTTCATATCTTGCAGGGCACTCGAGATGTCGTGTTGCCCCCAATACCGGCATTTCTACAAAACCTTGTGGAAGAATATGATCCTGCCAGCTACTCATAG
More
|
|||||||
| Protein seq | MAVPRLGFGFHWSNLFFVIKRALVRASCNGLLTKWAEAVPLENITCTEVHVCSPKRQGGMCLHPNLAPMDEIGEDCQSLESDRFPSQGGQTTDRGGWRLHITARRLGVAIVLVDLSKKLPTNGSLDCHLFNNVKVLDWYTRFQVILGVAKGLHYLHEECHECIIHCDIKPENVLVDADFSPKVADFGLAKLMDRNFSRALTTMRGTIGYLAPEWIAGLPITSKADVYSYGMMLFEIISGKRNTELMESKTIKYFPVWAAVRISNGDISEVFDHRMHDTNVQELERACKVACWCIQDNEAHRPTMQQIVHILQGTRDVVLPPIPAFLQNLVEEYDPASYS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.720566 | 1.289739 | 0.399691 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0553633 | SBH | 1.043140 | 0.000000 | 1.187818 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0553633 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0019060 | SBH | 0.515142 | 5.935747 | 3.275156 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018980 | SBH | 0.000000 | 0.527935 | 0.796439 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018930 | SBH | 1.135746 | 3.283451 | 2.527742 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018820 | SBH | 0.122532 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018870 | SBH | 0.000000 | 0.000000 | 4.083629 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0359600 | SBH | 3.498861 | 12.7555275 | 6.279047 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0019350 | SBH | 0.047499 | 0.000000 | 0.266913 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0371400 | RBH | 1.569271 | 3.905613 | 4.1811955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0018680 | SBH | 0.116632 | 0.083621 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0018830 | SBH | 0.199487 | 5.496959 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0018710 | SBH | 2.829708 | 3.792333 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018960 | SBH | 0.576370 | 0.203593 | 0.596269 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0018790 | SBH | 0.000000 | 1.440289 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G018640 | SBH | 0.218389 | 0.659307 | 0.951500 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018760 | SBH | 1.235195 | 9.617001 | 5.193858 |
