Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g39880 | OGI:04072310 | 11/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:23747525-23752767 | ||||||||
| Gene Symbol | BGLU12, Os4bglu12, Os4BGlu12, 4BGlu12, OsTAGG2, TAGG2 | ||||||||||
| DNA seq | TGTGTTGATAGAAGGTGTGTAACTATATACCTTTTGCTAAACTATGTGCAGGAAGTTAAGATATAGATGCAGACATGCAGTAAGAGAGGGATTTATTATTTAACTGGATTACTTCCATCTCTTGTACCAAATTCACGCAAAACATATACTCTTTTATTATTCAATGAGAAAAGCAATGAGTGCAATGGTGCTTTTTTATCATTTCAGGAGGAACTTCTTGAACCAATGGGCAGAGTTCTTGGGGTATCTCTTCCTTCCGTCATTGTAATCTACGAAGTTTATCCCAAATCGAACTGTGTAGCCGTTCGACCACTCGAAGTTATCAAGCAGCGACCATGCAAAGTATCCCTTCACGTTTGCTCCATCCCTGTGAAGGCATATGGAGTAATGCATTGTCAACTAGCATCTGAAGAACCCTACTCAGAAATGGGTCTATGATCAATAGTTCAGAGTTCAGACCTTATAGCACTTAGCAGGGAAAGGAGGTGCTTGTGGTAGTATTCTATCCTAGCGTCATCCTTCAAGGCTTCTTGGAGTGGTAAGGTCTTATTGTTGAATTCATCAACGCCTTAAGATGCAGCAATAAAAAATCAGTTAGATTCATTAACTTTTAGAGAATATATATTTTATTTCTTCAAGAAGCTAGGAGAAGAAAAATATTTATGCCATAGGAGTTCATTGCTGACTTAATTTAAAAATTAGAATGTGTTACCGTAGTATCGGAGACTTACCATTTTCAGTGATGTAGACGGTAGGATTGCCATAGTTCTCCTTAACATAAAGTAGCAAGTCACGGAAGCCTTGAGGGTAGACGTAAAGCCAAGGTGAAGCAGCCTACATACATGCCATTTTACAAAATTCAATATCTCACCTTAACTATTTACTATTAATTTATTTTGTGTGGAGGACAAAGTATGGAGTTACCTGCGGTCCTATGGGGATGCCATTTCGTACACCTGGCACAATCAGCATAGGTTAGCATATATTGACCCGTCTGAAACAGATAGGTATTGTGCAACAGAGGCTATGACATAAGCTGACCAAAATGCTTATCAGAAATGCTACAGTCTAATGGATATTATATGCTAGAAGCTTGCCATATCTTTGTATTTCAATGTTGCAAACACTATGAATTTAAAATAGAAATATAAACTCATATTGACTCACCGGTAAGATTAGCTCGAGAATCGGTGGTATAGCTGTTGTTAAGGCCATTTGATGGAGGAAGGTTATCAGCATAGTTCGCAGTGTAGTAGTTAAGTCCAATAAAGTCAAATGCACCCTTGACCAACTTAGACTGTTCTTTAGTGAACTGTGGCAAGCGATTCCCAACCAATCCTCTCATGCTTAGGGGGTAGTCGCCTCTAATGAGGGGATCCATAAACCTAGAAGGGAAATTCATTGTTGAAGACTTCTTTCATGTTTTAACAACTTCAATGATGAAATAATGTGTGACAGAATTTACCATCCAAACATGAAGTCTATAGCACGCTTTGCAGCATCATCGTTGGATTTGGAGCGGGAGAAGGGAACAAACCAGTGCGAGACCAGAGTTATTCCAATCTTCCCTTTTTGTAAGGCCTGCATTTATGAAGGATTTCATTGTTCAAGTGAGTGGTTGTGTAAATGCTGAACTCCAATCCTTTGATTTGGCAATGTATTCTAGTTGTTCTGCTTTCTTTCTCTTGCAGCCAGAGCTTTTCTCGTTCCATAGGACTATAATTAACAAGTAATACATATCTACAAGAGAAATTTTTACGGTCCTGAGGTACTACATTTTCTGGTATAAATTTTGGTACCTCTTACATTATAAAATGTGGTACCACCTGGCATCACTCAAGGACTGTAAAATCACTCTTTCTACAAAGATCATCTTCAGATTCAGGTATTTAATTGATAAGGTTTAAATGTATTAGTATTCGATCCGTAAGGACAGTAAAATCATTCTTTTTGAAAGTAACTAGTATATGCACATGTCTGTTGATATGATAGGAATCCAATCCATGATATGTGATATTTTAAACAGATAGCTGAAGTTACTAAAGTAATTTGCTAATGGATGTACTAACAAATTCTACCACCAGGACCGAACTGGAACTAAATGCTAAGCATGGATTATCAAAACCAAATTTGCAGATCTTTGATTTAACTCATTGTCATGGATGAATTGCAAGTGCTCAAAGGGATTCTTCAGTGACCTGATATTTCGCTTTGTACAACCGAACAGTTTCCGCGTGGGCAAGTAGTTGATGATGGCATGCAGTGTAAGGCTCCCTTCCTGAATCTCCAACACTGCAATTTCCCTTCTCCCAGGGCGAACAACGGCCTGGTGCAAACAGGCCAGTTGCATAGCCATTAGAGCAGAAAGTCCAAGGCTCATTGAAGGTGATCCAATTTTTCACTCTGTCACCAAACTCCTTGAAGCAGATTTCAGCATAGTCCTTAAAGTCATTTCTGCAACAGTTTTTCACAAACAGTAAACATAAGAAAATTTTCACTGTAGGCAACTCTTGACATTTTAGCTGAAAATAGTATAGGAAGAGAGTACTACTGTGGGTGGCGTAAGTGCCAATAAAGGGGTTTAATGCTGTCGAAAGAAAAACACATCCCAACTTACCTTCAATTAGTGTTATTCACAAGGAAATTGAGGAGAAAGCTCCAAAAGCCAATGAAATTGAAATAGGAGTCTTCGGCAGTTTAATGGGTATGCACAGTGATGGTCAGGTTAATTGATGTTGTCACATTTAGTTTAAATTTCACTCTCCTATCTTACTGAGTCTGTTTATTAACCTGACCAGTTTCCATTTCAACCTATCAAGGTATAACTAGTGATGTATTGAAGCAGAAGAATTGTTGACATACATGATATTAGGGCTAAGAAATCCATTATATTTATCTTCCAACGCCTGAGGTGAGTCCCAGTGGAAAAGGGTAATAAACGGTTGCACCCCTGCAAATGTATAAGGTTATTTGCATCTTGAATAAAAGAATATCTGGACTTCTGGAGTGGAACTAATTTGCATCTAGCCACTGAACTTGGAACTAAACACTGTAGACTGGAAAATGCGTACCTTTCGATAATAGCTCATTGATCAAATTATTGTAGTACTTTATGCCTTCTTTGTTGACTCCACCCCTCAGACTTCCATCTGCCATGACAGTGAATTTTCAATGTTTGGTGCCATCAACTTGGAGTATGACCAATGTGCAAATTATTGTACTACTTCAGAACAAAAAGGCTGATCAGCTTCAGATAAGCCAGAGCTGTCTGCTGATAGTTCTGTGATAGTGCATTGTATCAGGTTTGAAATAAGTAGAAGGTCGGAAGATATGGCCACTCACTTGGAAGGATTCTTGTCCATGAGATGGAGAACCTGTATGCATCCATTCCCATATCCTTCATGAGGCGCACATCTTCCTGCATTATTTTTCACAAGTACCTCTGGATAAGTACTAAATTGTTTTTTTAAAAGAAGTTTAGAATAGAATTTGAAGAGATTGTGATAGGCAATATCTCCTAGCTGTAGTAGAACAATCTAACACGACTCAGAGTATACTTTTTTTTTTTTGACTAAAGACTCAGAGTATACTTTTAGTTACAATCATTACGAAAAATCAATTAGAAATGCATGTTTGCTACTTGAAAAATGTACTAACTGCTAATATACCTTGTAGAGATGGTAGGAATCCGAAGCCACATCCCCGTTGCTTCTGTCGGCGATTTTCTCTGCCAAATCAGATAATCGTCAATCCAAAAATGTTGTCCTTGTCCATTGATTTCTTATCATTTCACATCAATCATGTGCTTAAGTTACCCCTGATTTCTACATTTCCCTTTAGACTATTCAGTACATTACATCCCAGGTAGGACAAGAATATCAACGGCCTCTTTTGTAAACCACGCGCAGGAAATAATATTTGGACGAAAAGCAATTCGAGAAGATGGTGACTGTTTAGACCAATCGTCTGAATTGTGATGATGATTTTTTGAAAAGCGACGTGATTGGATTACTAGGTCAAGATTGAAGATACCCGCTGAGCTATCGTAGGAAGAGCAAAAATCTTGCTCACAGCAAAATATTGGACCATTCGCAAAGATAGGATGGTCTAGTTGCATAGATAATCCACCAAACAGGAAAAAATATACTCAGAACATAATCGCGCGTAATTTGTTTTTCAGATATTGCTATGGTACCATATGTGTAGTGTATGCATGCAACTTCTACTGGCTGGGATTGCTAAATATGGTCAGATTTCATTATTGTTGAGATATACTCCCTCCGTTTTTTAATAGATGACACCGTTGATTTTTTCTCACATATTTGACCATTTGTCTTATTAAAAAAATTTACGTAATTATAATTTATTTTATTATGAGTTATTTTATCACTTATAGTACTTTAAATGTGATTTATATCTTATACATTTGTATAAAATTTTTGAATAAGACGAATGGTCCATGTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGATGGAGTATATAGAATGCACATAATTAAAGTTGATTAACACAAGTCTGCACTTGTTATCTTTTAGGGAATGCAATTTTTTTTAATTAGGGAATGTGCACTTGTTATCCTAAAAAAGAAAAGAAAACAAATCTGTACGTAGCACAGCTTGCAGGCAGAGATGCAATTAACATGCCTGGGTGCTGATGTGTGAAGGTGTCCCAGATGCTTGGTCCTCTGCCGCCCTCCGCTGCGCCACCCTCGTACTGCATCTCAAGAACAGCCAATTCCTCAGATTTCAGACCAAGACAAAAACATGTCTCAGTGTGACAGTTAAAATTTTAGCAACCGATTCATTCCTTGGTGCCAATTTGAGCATTACCCAGTAGCATTGCCTTTCTGTGTGAATCTGTACCAACGTATTCTCGGTGGAGAAAAGTTGCACAAATCTGTTTGTAGTTTTGCTCCTTTTCCTTTTTGTTCATGAGAGAACTGAATTTCTTCTGCACAGTTACATATGCATGGAACTGGAAGCTTTCTTTGCTGTAGGAGTGGAAGGGAAGTGGAAGCTTAACCTGATACGACGACGAGGCTGTCCCGAAGATGAACCCCTTGGGGAAGCTTCTCCGGCTGACCGGCGGCTCGCCGGCGCCATTGTAGGCGCCGGAAGCGACGACAGCAAGGAGGAGGAACGTGAGGAGAAGGCCACCGGGCATTGCCCCTGCTGCCGCCATGGACAGAAAAAGGAAAAATAGAGAGATGGCTGT
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| CDS seq | ATGGCGGCAGCAGGGGCAATGCCCGGTGGCCTTCTCCTCACGTTCCTCCTCCTTGCTGTCGTCGCTTCCGGCGCCTACAATGGCGCCGGCGAGCCGCCGGTCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTCGGGACAGCCTCGTCGTCGTATCAGTACGAGGGTGGCGCAGCGGAGGGCGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGCACCCAGAGAAAATCGCCGACAGAAGCAACGGGGATGTGGCTTCGGATTCCTACCATCTCTACAAGGAAGATGTGCGCCTCATGAAGGATATGGGAATGGATGCATACAGGTTCTCCATCTCATGGACAAGAATCCTTCCAAATGGAAGTCTGAGGGGTGGAGTCAACAAAGAAGGCATAAAGTACTACAATAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCGTTTATTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAATGGATTTCTTAGCCCTAATATCATAAATGACTTTAAGGACTATGCTGAAATCTGCTTCAAGGAGTTTGGTGACAGAGTGAAAAATTGGATCACCTTCAATGAGCCTTGGACTTTCTGCTCTAATGGCTATGCAACTGGCCTGTTTGCACCAGGCCGTTGTTCGCCCTGGGAGAAGGGAAATTGCAGTGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCATCAACTACTTGCCCACGCGGAAACTGTTCGGTTGTACAAAGCGAAATATCAGGCCTTACAAAAAGGGAAGATTGGAATAACTCTGGTCTCGCACTGGTTTGTTCCCTTCTCCCGCTCCAAATCCAACGATGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAGAGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAAGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCGAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCTCGAGCTAATCTTACCGGTGTACGAAATGGCATCCCCATAGGACCGCAGGCTGCTTCACCTTGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGCTACTTTATGTTAAGGAGAACTATGGCAATCCTACCGTCTACATCACTGAAAATGGCGTTGATGAATTCAACAATAAGACCTTACCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCTTTCCCTGCTAAGTGCTATAAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCTGCTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGATTACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCTCCTGAAATGA
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| Protein seq | MAAAGAMPGGLLLTFLLLAVVASGAYNGAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNDDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK |
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| Function | Beta-glucosidase 12 [UniProtKB/Swiss-Prot:Q7XKV4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39880 | LOC_Os04g39880.1 | Chr04 | 23747525 | 23752767 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGCAGCAGGGGCAATGCCCGGTGGCCTTCTCCTCACGTTCCTCCTCCTTGCTGTCGTCGCTTCCGGCGCCTACAATGGCGCCGGCGAGCCGCCGGTCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTCGGGACAGCCTCGTCGTCGTATCAGTACGAGGGTGGCGCAGCGGAGGGCGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGCACCCAGAGAAAATCGCCGACAGAAGCAACGGGGATGTGGCTTCGGATTCCTACCATCTCTACAAGGAAGATGTGCGCCTCATGAAGGATATGGGAATGGATGCATACAGGTTCTCCATCTCATGGACAAGAATCCTTCCAAATGGAAGTCTGAGGGGTGGAGTCAACAAAGAAGGCATAAAGTACTACAATAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCGTTTATTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAATGGATTTCTTAGCCCTAATATCATAAATGACTTTAAGGACTATGCTGAAATCTGCTTCAAGGAGTTTGGTGACAGAGTGAAAAATTGGATCACCTTCAATGAGCCTTGGACTTTCTGCTCTAATGGCTATGCAACTGGCCTGTTTGCACCAGGCCGTTGTTCGCCCTGGGAGAAGGGAAATTGCAGTGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCATCAACTACTTGCCCACGCGGAAACTGTTCGGTTGTACAAAGCGAAATATCAGGCCTTACAAAAAGGGAAGATTGGAATAACTCTGGTCTCGCACTGGTTTGTTCCCTTCTCCCGCTCCAAATCCAACGATGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAGAGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAAGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCGAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCTCGAGCTAATCTTACCGGTGTACGAAATGGCATCCCCATAGGACCGCAGGCTGCTTCACCTTGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGCTACTTTATGTTAAGGAGAACTATGGCAATCCTACCGTCTACATCACTGAAAATGGCGTTGATGAATTCAACAATAAGACCTTACCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCTTTCCCTGCTAAGTGCTATAAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCTGCTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGATTACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCTCCTGAAATGA
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| Protein seq | MAAAGAMPGGLLLTFLLLAVVASGAYNGAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNDDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39880 | LOC_Os04g39880.2 | Chr04 | 23747525 | 23752767 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGCAGCAGGGGCAATGCCCGGTGGCCTTCTCCTCACGTTCCTCCTCCTTGCTGTCGTCGCTTCCGGCGCCTACAATGGCGCCGGCGAGCCGCCGGTCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTCGGGACAGCCTCGTCGTCGTATCAGTACGAGGGTGGCGCAGCGGAGGGCGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGCACCCAGAGAAAATCGCCGACAGAAGCAACGGGGATGTGGCTTCGGATTCCTACCATCTCTACAAGGAAGATGTGCGCCTCATGAAGGATATGGGAATGGATGCATACAGGTTCTCCATCTCATGGACAAGAATCCTTCCAAATGGAAGTCTGAGGGGTGGAGTCAACAAAGAAGGCATAAAGTACTACAATAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCGTTTATTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAATGGATTTCTTAGCCCTAATATCATAAATGACTTTAAGGACTATGCTGAAATCTGCTTCAAGGAGTTTGGTGACAGAGTGAAAAATTGGATCACCTTCAATGAGCCTTGGACTTTCTGCTCTAATGGCTATGCAACTGGCCTGTTTGCACCAGGCCGTTGTTCGCCCTGGGAGAAGGGAAATTGCAGTGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCATCAACTACTTGCCCACGCGGAAACTGTTCGGTTGTACAAAGCGAAATATCAGGCCTTACAAAAAGGGAAGATTGGAATAACTCTGGTCTCGCACTGGTTTGTTCCCTTCTCCCGCTCCAAATCCAACGATGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAGAGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAAGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCGAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCTCGAGCTAATCTTACCGGTATGTAG
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| Protein seq | MAAAGAMPGGLLLTFLLLAVVASGAYNGAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNDDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39880 | LOC_Os04g39880.3 | Chr04 | 23747525 | 23750728 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCAGATGGAAGTCTGAGGGGTGGAGTCAACAAAGAAGGCATAAAGTACTACAATAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCGTTTATTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAATGGATTTCTTAGCCCTAATATCATAAATGACTTTAAGGACTATGCTGAAATCTGCTTCAAGGAGTTTGGTGACAGAGTGAAAAATTGGATCACCTTCAATGAGCCTTGGACTTTCTGCTCTAATGGCTATGCAACTGGCCTGTTTGCACCAGGCCGTTGTTCGCCCTGGGAGAAGGGAAATTGCAGTGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCATCAACTACTTGCCCACGCGGAAACTGTTCGGTTGTACAAAGCGAAATATCAGGCCTTACAAAAAGGGAAGATTGGAATAACTCTGGTCTCGCACTGGTTTGTTCCCTTCTCCCGCTCCAAATCCAACGATGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAGAGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAAGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCGAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCTCGAGCTAATCTTACCGGTGTACGAAATGGCATCCCCATAGGACCGCAGGCTGCTTCACCTTGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGCTACTTTATGTTAAGGAGAACTATGGCAATCCTACCGTCTACATCACTGAAAATGGCGTTGATGAATTCAACAATAAGACCTTACCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCTTTCCCTGCTAAGTGCTATAAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCTGCTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGATTACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCTCCTGAAATGA
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| Protein seq | MADGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNDDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.130080 | 4.756702 | 0.608973 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0474800 | RBH | 6.729942 | 11.612279 | 2.541452 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g39900 | RBH | 0.751403 | 0.743561 | 1.008146 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0474800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0016870 | SBH | 0.958650 | 70.786842 | 10.249881 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0017650 | RBH | 0.651530 | 84.174400 | 5.389337 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0017360 | RBH | 1.675880 | 955.514771 | 12.355116 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0017070 | RBH | 0.141098 | 12.779420 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0017310 | SBH | 2.662956 | 131.483566 | 73.363663 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0370300 | RBH | 34.2057305 | 25.1759225 | 6.9857765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0016100 | RBH | 0.408851 | 31.352030 | 2.405810 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0368800 | RBH | 29.4808655 | 14.134956 | 4.947016 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0016660 | SBH | 0.757983 | 1.589064 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0016530 | SBH | 0.503370 | 15.041989 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0016540 | RBH | 2.680011 | 188.862747 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0017030 | RBH | 2.897782 | 18.298510 | 5.654611 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0017120 | RBH | 0.779639 | 195.932587 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G016350 | RBH | 1.098354 | 29.265858 | 4.743832 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0016370 | SBH | 6.220611 | 167.321060 | 29.707485 |
