Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os04g34670		OGI:04056480 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr04:20967161-20973125		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		-
DNA seq		ATGGCGGTGGACAAATCCGGCGGCGGCGGAGGCGGAGGCGGCCCTCCTCCTCCTCGTCGGGCGTCCCCGCATCCACCATGGACCGCTTCCACAAGATCGTCCTCAGCTGGGACTACTTCCGCCTCGTCGCGGACTCCAAGGTACGCCCCTCCCCGCCCCGCCCCGAGCGCTCGCTTTGCAATCACCGGCACCACCTTTGAATTTTTTTTCTATATGGCGGCTTGGGAGGACAGGGCGGGCAGCAGCAGGCGAAGGGGCTGGGGCGCGTGAAGAACACGTACGCCTCGGTGGCCGAGTACCTCGCTGTGTTCGAGCCGCTGCTGTTCGAGGAGGTGAAGGCGCAGATCGTCCAGGGGCGCAGCGACGAGGAGGAAGGTGGGTGGGTGGGTGGCGCGCCCGATTTCGTGTTGCCCCCCCAATTTGCTGTCGGTTTATTTAACAGTGTGTGTGTGTGTGTGTTGTTTTTCTCTCCCTTGCGTTTCTGTGTGGGCAGAGGCTGGGCAGGACTGGCAGAAGGGGATTGTGGCGTCGTGCACCGAGTCGGAGGGGTTCCACAAGGTGTCCATGGCCGTGCTTGATGATTTCCGGGAGATGGTGTCGGAGAACGATCTCCTGCTGCTGTCCAAAGAGAAAGTAAGTGCTTTAGCACCTTAGTGGTGTGATAGGAAATGTTTCAAAAGGTATAGATGGCTACAGAATTTAGTGGAACATATAGCGTGTCAAGAACTCAAGACAATGTTAGTTACTTATCTGCGCTCCTACATTTGGAAGGGCTATGGGGAACTTGAGACATAATTTCACCAGAAAAAGTGCTTTCCATGGTTTTAGATAATATGCCAGGCTAGCAAAATGCTCCATCGATTCTATGCGATCTCTCTTCAAGAAAGAAGTTATGATTGAAAATTCATAACATTGATATATATCTGCACTTTTGTAGTTTGAAGAGGGAGTGACCCCCAGTGCATATGCCTTTGCCTTAGTGGAACAGCGGGGTGGCAGAGAAACGATTTCTCTAAGGACATTTGTGGCAGGTGAAATAAAAAATCTTAATGTAGCAAAGCCTGTGAGCTGTTCTAGGCTGCAGCGTATTGCTTCCATTTTTTCAACTACAGAGAGCTTCCTCTGGATTTTAAAGGTGAGTTTCAACTGCTAATAAAGAATGCCTGAGTTTTCATGCTTGCATAATTCATTGACAACACATATGAATATGCTATTTTCTTTTATGGTTAAAATTGTCAGATTTGCAGCTTGTCTACCATAATGCGAGAATTCTCGGGCATGCACTCTGTAGCATCACTTCCTTTTAAGGATCTGATTCTTTCAGCTAGTGAGAAGAACAGTGGTGGGAATGATCAAAACCGTGCTTGGAATGTCCCTGAGCCACTTATGGATTATCTTAAAACAAACCTTAATGATTCACAACTAGATGCAGTCAACGTGAGCATTATTCTTAATATCCTTTTTTGTTGCTCAATTTAGTTCTAAGAAAAATCAGATGTCTGATTGATCAATGCATTATCTCTTGCAGGCAGGTCTTTCTCGCAGATCCTTTGTTCTTATCCAGGTTTGTTTGCTTATTTCCAGTTATATTTGTTTATTTTTCAGTATTATTTATCATTAACCTATTTTAGAGAAATGCTAGTGCCTTGAGAACTAGAGTATATGCAGCTACATGTGCTCTACTTGTTGTCACATGCCATTCATATAGAACTCCAATGTATATTTGTAGGGGCCCCCAGGAACAGGAAAAACACAAACTATCCTTGGACTCCTCAGTGCTGTTCTCCATTCTGCTCCTGCAAGAATGCAAACCAAGTAATATCTTCACCTGTGTATATTTATTACTGAGTGAAATGTAGACTAGTATCTTTCTGTTATGGAGAGGAGAAACCTTGATATATAAAAAAAGAGATATTAGAAGCTAAAACATAAATATAAGTGTTCAATACAGTTTCCAAAAGCTACATGTATCTGACATGATTTACGTTCTTGTCATGCAGAGGTGGTTTTGATGTTAAAAAACACGGTCCAGAGCTTGATATTGAGGGCAAGTATGTTAATGAATTGGACTCTTTTCAATTGCTTCATCCTCAGCTAATTTTCTTGTTTTGTCCATTTCTTCTGCTTGCTTTTTTCCTCCTTTAAACAAGTTCTCTATGGTGTTTGGAAATAACAAATTCACCTTACTTTATGGTACTTCTCTTAGTGTTTGTTAGAGGGAGAAGATTGTAGCTATTTTTACATTTGTACTATCATATTTAGTGATCACTCAGCATGTGGATTTTATATGTAGTATGGGAACTGATAAAGAAATTCTTTTCAGTGTATTTTTTTCTTTTCTTACTCTGTGGAATTATGCAGTTCCTTTATTTGCTACATAATACTGCTGCAAATATCTGTTGCACTATCTTACTGCAGAGCTCATGTGATAGGCATGCACACTGGATGAAGGCCTCCCCGTGGCTGATTGGTGTAAATCCTCGAGATTTAATTATGCCTGTTGACGGCGATGATGGTTTTTATCCTACTGGGAATGAGCTAGTAAGCTTCTGTGCTCTGTACTTTGCTATATTTGCCATGATGCCTGTATGAATTTTGTATTTTTGTTACATGGTAAACACCTGTCTTGATAGAAACCTGAGGTCGTAAGTTCCAATCGCAAGTATCGGGCCCATGTCTTGGTCTGTGCTCCATCCAACTCAGCACTTGATGAGATTGTGCTGCGAGTTCTGCAAATAGGTAAAGGGGTTTCTGTGCTGACTGATCCAATTCAGAAAAATGTTCTGACAATAAAAATACTCTTTCAATTGCATCCATGTGCTACAAACTAAACAACATTTCTTAGGCTCATCTGGTCACTAATTTATTGATCGGAAAATCAATCATCTAAATTATTATTCTTCTTCCTTTCAGGAATACGCGATGAAAATAACAACACCTATAATCCTAAGATTGTGCGAATTGGACTGAAGGCGCATCACTCTGTTAAAGCAGTTTCCATGGATTACCTTGTACGTGATTTTAGTTGCTAAGTATTTTCTGTCCAACTCAATTACAGTGAGTTGATAAGTTGATATCTTTGCAGATACAACAAAAACTTTCTGGTGTGGATCGCTCATCAGATGGTGGGAGACGAGGGGCTGGTGAATATGATCGAATTAGATCTTCCATTCTTGATGAAGCAGCCATCGTACATTCATTTTCTTATTTCACATTCTTTTGCTTATTTCAGTATTCCAGGAATCATTTAATATTTGATTCTGACTGTCAAGCAAAATTTGTAGGTGTTTTCTACGCTAAGTTTTAGTGGATCATCCATTTTCAGCAGGATGGCTCGTGCTTTTGATGTTGTTATAATTGATGAAGCTGCACAAGCTGTGAGTGTTTGCTTTATACAGATTGTTACACGATGGAGCATTTAGCCACTCAGATTTAGATAATGGTATTTTATGAGTTTCTGACTTTCTGTTATGTTGAAATTCTGAAGTTTGGCATATCCCCTTCTTTTTTCAGGTAGAACCAGCAACTCTTATACCCTTGATCCATGGGTGCAAACAAGTTTTTCTTGTATGACATCCACCTATCTACGATTTATGTTGCCCTTCTCTTCAACTATGAGCCTTATCTTTATGCCTTACCATTTTGTCATTATAATACCTTGTTAATTCGCTCAGCAAAGAAATCATACATGGGCATGGCACTTTTAAATTTATTTTGCTGGAGTACACAGAGATCTTTCACTAGCTTAGATTTGATTCTCTGACCATGTGTTTTCATTTCTCAGTGCGTCTGCACACACTGTTTCTCTAGATACCCTGATACATGAAGCTTTCATCTGAGCTGATTGTGATCTCATATCTAACTATTTCTGTTAATATTTTGTCAGGTTGGTGACCCAGTTCAGTTGCCTGCAACTGTAATTTCATCTACTGCTCAGAAGTTAGGGTAAGATCTCTCTCTCTCTGTTCTATACATACTCTGGATGTAAGGTTTTACAACATTCTAAATAATACTAATGTATCCATTAGGTACGGTACTAGTTTGTTCAAGAGATTTCAGGCTGCGGGTTTTCCTGTGCAAATGCTCAAAATTCAGTATCGCATGCACCCAGAGGTAATATTGCCTAAATTCATTTAAAAGATGGAGACTGGAGTCGTTTTCTTATTTTATTAATCCACTAAAAAACAGATTAGTATATTCCCCTCAAAAGAATTCTACGAAGGTGTCCTAGAAGACGGGGAGGGACTCAGCAAGAAACGTCCATGGCATTCCTACAGCTGTTTCGGCCCATTCTGCTTCTTTGATGTGGATGGGACTGAGTCCCAACCATCTGGAAGTGGTTCATGGGTGAATGAGGATGAAGTGGAATTCATAACCCTCTTATATCATCAAATGGCTATGCGCTATCCAGAACTCAAATCTAGTTCCCAGGTAGCTGTCATATCACCATACAGGCATCAGGTGAAGCTCTTGAAGGACCATTTTCGGTCGACCTTCGGTGATCAGTCTAAGGAAGTGATAGACGTAAATACAGTTGATGGATTCCAGGTTTGTTTTGCATGCAAATGCAGACCTGCTGTATATGTAGATTTGTAGCAAATCACAGTGATTATAACTTTTGTAATGTTTGTTCTTGATGCTCACATATAGGGGCGTGAAAAGGAAGTAGTCATTTTCTCATGTGTTCGGTGCAATAAGGAACAAAAGATTGGGTTCGTTTCTGATTTTCGACGAATGAATGTCGCCATCACAAGAGCTAGGTCTGCTGTACTAGTAAGTAATCTATGCAAACTCCAATCCTTACATGTCATACCAATTTCTGCATGATTTGCAGTCAAGCAGTACCGTCTTTTGCATAATACACAGCGGATATGCACTCATATGAGTACAGAGGCGTGTTTTTACTCAATAATGGAGAGTTTTGCATCCTAGTGAAGTGTGTACAAAGCAAGGAGCATCTCTCTCATACAGTACTGCTCAGCATGCTAGTTCAAGGTGGCTGCTGTAATTTTTGTTCTGTCATGTGAGGTTTTATCTTACGTTCATAATGTAAAGTCCCTTTCTGAGATTGGTGAGCTGTGCAATATGTAACTTTCTTGGATTCCATCCATTACACAGGGGCTAGTAAAAGTAAATCATAGACTGGATATCTGGTCAATCAGTTGTTTCTGGCTATATCACTATTTGCTTATGTAGTTAACTTTGTTGGTTTAGTTATCAATCCAAATAATACTTGTCATACCACAGGTTGTAGGTTCTGCTTCAACATTGAAGGAAGATAAACACTGGAACAACCTTGTGGAGAGTGCAAAAGAGCGGGGTCGCTATTTCCAGGTTTGATTGCTGCCACCTTTTCCTTTTGTTCAAAGCATAGGAAGTAAACACTTGAATGAATCTAACTATGAGCACCTTGTAGGTTCCGAAGCCATTCACCGCATTCTTTGTGGATGATAAGCTGAAAACCATGAAAGTGGAGAGAGCTCCTCCGGAGCTGAGGACTGTGCAAGCATTGGAAGCAATAAACGAAGCAGTTGTAGGGCAAGAACTCATGGATGTCGACGATGCTGGCGACCAAGAGGATGAAGGGTATGATGATGATCCCGTGGAGGCTGATGATGGTGGCGGCGATGACTAACCATTCACTACCACATAGAGGTATGTAGAAGAGCAACATTTGTTTAGGTGGACTTGGATGCTGGACCCCAGCCACAGCCAGGGCCTTTAGTTGAGCCTTCGAATTACAAATTCAGTGCCGTGATTCTTTGCTATTTCGGGTGCGAGAGGTGGCTGAATGCCTGAGTTCATAGTTGCAGGCATAGCTACATCTTATGTTTTAAGTTATGTATGTATACAAAGCCCCTTGCACCAAAAGAGCTGAAAACTGCTCAACTGGCTTTAATTTGTCTGCGGCTATAATTTTGCACGGCAGTTGTGCATATTGTTCCAAAAAAAGAAGTGTTGCTCT More
CDS seq		ATGGACCGCTTCCACAAGATCGTCCTCAGCTGGGACTACTTCCGCCTCGTCGCGGACTCCAAGGGCGGGCAGCAGCAGGCGAAGGGGCTGGGGCGCGTGAAGAACACGTACGCCTCGGTGGCCGAGTACCTCGCTGTGTTCGAGCCGCTGCTGTTCGAGGAGGTGAAGGCGCAGATCGTCCAGGGGCGCAGCGACGAGGAGGAAGAGGCTGGGCAGGACTGGCAGAAGGGGATTGTGGCGTCGTGCACCGAGTCGGAGGGGTTCCACAAGGTGTCCATGGCCGTGCTTGATGATTTCCGGGAGATGGTGTCGGAGAACGATCTCCTGCTGCTGTCCAAAGAGAAATTTGAAGAGGGAGTGACCCCCAGTGCATATGCCTTTGCCTTAGTGGAACAGCGGGGTGGCAGAGAAACGATTTCTCTAAGGACATTTGTGGCAGGTGAAATAAAAAATCTTAATGTAGCAAAGCCTGTGAGCTGTTCTAGGCTGCAGCGTATTGCTTCCATTTTTTCAACTACAGAGAGCTTCCTCTGGATTTTAAAGATTTGCAGCTTGTCTACCATAATGCGAGAATTCTCGGGCATGCACTCTGTAGCATCACTTCCTTTTAAGGATCTGATTCTTTCAGCTAGTGAGAAGAACAGTGGTGGGAATGATCAAAACCGTGCTTGGAATGTCCCTGAGCCACTTATGGATTATCTTAAAACAAACCTTAATGATTCACAACTAGATGCAGTCAACGCAGGTCTTTCTCGCAGATCCTTTGTTCTTATCCAGAGCTCATGTGATAGGCATGCACACTGGATGAAGGCCTCCCCGTGGCTGATTGGTGTAAATCCTCGAGATTTAATTATGCCTGTTGACGGCGATGATGGTTTTTATCCTACTGGGAATGAGCTAAAACCTGAGGTCGTAAGTTCCAATCGCAAGTATCGGGCCCATGTCTTGGTCTGTGCTCCATCCAACTCAGCACTTGATGAGATTGTGCTGCGAGTTCTGCAAATAGGAATACGCGATGAAAATAACAACACCTATAATCCTAAGATTGTGCGAATTGGACTGAAGGCGCATCACTCTGTTAAAGCAGTTTCCATGGATTACCTTATACAACAAAAACTTTCTGGTGTGGATCGCTCATCAGATGGTGGGAGACGAGGGGCTGGTGAATATGATCGAATTAGATCTTCCATTCTTGATGAAGCAGCCATCGTGTTTTCTACGCTAAGTTTTAGTGGATCATCCATTTTCAGCAGGATGGCTCGTGCTTTTGATGTTGTTATAATTGATGAAGCTGCACAAGCTGTAGAACCAGCAACTCTTATACCCTTGATCCATGGGTGCAAACAAGTTTTTCTTGTTGGTGACCCAGTTCAGTTGCCTGCAACTGTAATTTCATCTACTGCTCAGAAGTTAGGGTACGGTACTAGTTTGTTCAAGAGATTTCAGGCTGCGGGTTTTCCTGTGCAAATGCTCAAAATTCAGTATCGCATGCACCCAGAGATTAGTATATTCCCCTCAAAAGAATTCTACGAAGGTGTCCTAGAAGACGGGGAGGGACTCAGCAAGAAACGTCCATGGCATTCCTACAGCTGTTTCGGCCCATTCTGCTTCTTTGATGTGGATGGGACTGAGTCCCAACCATCTGGAAGTGGTTCATGGGTGAATGAGGATGAAGTGGAATTCATAACCCTCTTATATCATCAAATGGCTATGCGCTATCCAGAACTCAAATCTAGTTCCCAGGTAGCTGTCATATCACCATACAGGCATCAGGTGAAGCTCTTGAAGGACCATTTTCGGTCGACCTTCGGTGATCAGTCTAAGGAAGTGATAGACGTAAATACAGTTGATGGATTCCAGGGGCGTGAAAAGGAAGTAGTCATTTTCTCATGTGTTCGGTGCAATAAGGAACAAAAGATTGGGTTCGTTTCTGATTTTCGACGAATGAATGTCGCCATCACAAGAGCTAGGTCTGCTGTACTAGTTGTAGGTTCTGCTTCAACATTGAAGGAAGATAAACACTGGAACAACCTTGTGGAGAGTGCAAAAGAGCGGGGTCGCTATTTCCAGGTTCCGAAGCCATTCACCGCATTCTTTGTGGATGATAAGCTGAAAACCATGAAAGTGGAGAGAGCTCCTCCGGAGCTGAGGACTGTGCAAGCATTGGAAGCAATAAACGAAGCAGTTGTAGGGCAAGAACTCATGGATGTCGACGATGCTGGCGACCAAGAGGATGAAGGGTATGATGATGATCCCGTGGAGGCTGATGATGGTGGCGGCGATGACTAA More
Protein seq		MDRFHKIVLSWDYFRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKEKFEEGVTPSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSSCDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDGGGDD
Function		Probable helicase MAGATAMA 3 [UniProtKB/Swiss-Prot:B6SFA4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os04g34670	LOC_Os04g34670.1	Chr04	20967161	20973125	+	MSU_osa1r7
CDS seq	ATGGACCGCTTCCACAAGATCGTCCTCAGCTGGGACTACTTCCGCCTCGTCGCGGACTCCAAGGGCGGGCAGCAGCAGGCGAAGGGGCTGGGGCGCGTGAAGAACACGTACGCCTCGGTGGCCGAGTACCTCGCTGTGTTCGAGCCGCTGCTGTTCGAGGAGGTGAAGGCGCAGATCGTCCAGGGGCGCAGCGACGAGGAGGAAGAGGCTGGGCAGGACTGGCAGAAGGGGATTGTGGCGTCGTGCACCGAGTCGGAGGGGTTCCACAAGGTGTCCATGGCCGTGCTTGATGATTTCCGGGAGATGGTGTCGGAGAACGATCTCCTGCTGCTGTCCAAAGAGAAATTTGAAGAGGGAGTGACCCCCAGTGCATATGCCTTTGCCTTAGTGGAACAGCGGGGTGGCAGAGAAACGATTTCTCTAAGGACATTTGTGGCAGGTGAAATAAAAAATCTTAATGTAGCAAAGCCTGTGAGCTGTTCTAGGCTGCAGCGTATTGCTTCCATTTTTTCAACTACAGAGAGCTTCCTCTGGATTTTAAAGATTTGCAGCTTGTCTACCATAATGCGAGAATTCTCGGGCATGCACTCTGTAGCATCACTTCCTTTTAAGGATCTGATTCTTTCAGCTAGTGAGAAGAACAGTGGTGGGAATGATCAAAACCGTGCTTGGAATGTCCCTGAGCCACTTATGGATTATCTTAAAACAAACCTTAATGATTCACAACTAGATGCAGTCAACGCAGGTCTTTCTCGCAGATCCTTTGTTCTTATCCAGAGCTCATGTGATAGGCATGCACACTGGATGAAGGCCTCCCCGTGGCTGATTGGTGTAAATCCTCGAGATTTAATTATGCCTGTTGACGGCGATGATGGTTTTTATCCTACTGGGAATGAGCTAAAACCTGAGGTCGTAAGTTCCAATCGCAAGTATCGGGCCCATGTCTTGGTCTGTGCTCCATCCAACTCAGCACTTGATGAGATTGTGCTGCGAGTTCTGCAAATAGGAATACGCGATGAAAATAACAACACCTATAATCCTAAGATTGTGCGAATTGGACTGAAGGCGCATCACTCTGTTAAAGCAGTTTCCATGGATTACCTTATACAACAAAAACTTTCTGGTGTGGATCGCTCATCAGATGGTGGGAGACGAGGGGCTGGTGAATATGATCGAATTAGATCTTCCATTCTTGATGAAGCAGCCATCGTGTTTTCTACGCTAAGTTTTAGTGGATCATCCATTTTCAGCAGGATGGCTCGTGCTTTTGATGTTGTTATAATTGATGAAGCTGCACAAGCTGTAGAACCAGCAACTCTTATACCCTTGATCCATGGGTGCAAACAAGTTTTTCTTGTTGGTGACCCAGTTCAGTTGCCTGCAACTGTAATTTCATCTACTGCTCAGAAGTTAGGGTACGGTACTAGTTTGTTCAAGAGATTTCAGGCTGCGGGTTTTCCTGTGCAAATGCTCAAAATTCAGTATCGCATGCACCCAGAGATTAGTATATTCCCCTCAAAAGAATTCTACGAAGGTGTCCTAGAAGACGGGGAGGGACTCAGCAAGAAACGTCCATGGCATTCCTACAGCTGTTTCGGCCCATTCTGCTTCTTTGATGTGGATGGGACTGAGTCCCAACCATCTGGAAGTGGTTCATGGGTGAATGAGGATGAAGTGGAATTCATAACCCTCTTATATCATCAAATGGCTATGCGCTATCCAGAACTCAAATCTAGTTCCCAGGTAGCTGTCATATCACCATACAGGCATCAGGTGAAGCTCTTGAAGGACCATTTTCGGTCGACCTTCGGTGATCAGTCTAAGGAAGTGATAGACGTAAATACAGTTGATGGATTCCAGGGGCGTGAAAAGGAAGTAGTCATTTTCTCATGTGTTCGGTGCAATAAGGAACAAAAGATTGGGTTCGTTTCTGATTTTCGACGAATGAATGTCGCCATCACAAGAGCTAGGTCTGCTGTACTAGTTGTAGGTTCTGCTTCAACATTGAAGGAAGATAAACACTGGAACAACCTTGTGGAGAGTGCAAAAGAGCGGGGTCGCTATTTCCAGGTTCCGAAGCCATTCACCGCATTCTTTGTGGATGATAAGCTGAAAACCATGAAAGTGGAGAGAGCTCCTCCGGAGCTGAGGACTGTGCAAGCATTGGAAGCAATAAACGAAGCAGTTGTAGGGCAAGAACTCATGGATGTCGACGATGCTGGCGACCAAGAGGATGAAGGGTATGATGATGATCCCGTGGAGGCTGATGATGGTGGCGGCGATGACTAA More
Protein seq	MDRFHKIVLSWDYFRLVADSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEEVKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKEKFEEGVTPSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTTESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSSCDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPTGNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKRPWHSYSCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDGGGDD More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.000000	0.000000	0.000000

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0424200	RBH	0.000000	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os06g20500	SBH	1.509975	1.095220	0.653784
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0424200	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0013340	RBH	0.000000	0.000000	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0014170	RBH	0.043152	0.000000	0.249262
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0013940	RBH	0.000000	0.000000	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0013550	RBH	0.000000	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0013880	RBH	0.752994	1.498701	2.231310
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0332300	RBH	0.4444425	2.645657	4.764658
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0012790	RBH	0.050311	0.000000	0.000000
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0328800	RBH	1.732788	8.823859	10.8719575
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0013360	RBH	0.000000	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0013040	RBH	0.000000	0.000000	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0013050	RBH	0.000000	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0013620	RBH	0.000000	0.119044	0.061800
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0013800	RBH	0.000000	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G012900	RBH	0.000000	0.666938	0.141891
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0012870	RBH	0.481578	4.377009	1.649101

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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