Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os03g21160 | OGI:03032230 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr03:12068075-12071899 | ||||||||
| Gene Symbol | C3H23, OsC3H23 | ||||||||||
| DNA seq | CCGGCCCAAGAAAGCCATGCTCAGGCCAGTGTGCTCAAGAAAGGGGCGCGCAGCGAGCTCGCGACTACTCACTCTCAATCCTTTGGGAAATGGAGCTGCTCAGTGGCTCAGTGGCCGCAGCTCCGGGAAGCGGAGGCTACCGAGAGCAACCGGACCACGCCAAGAAGCACTAGCTAGTGTACTGCCTCCTCGATCTTGCTCTATCTACCACTAGCATCGAGCTTGCTTCGCTAGCTCCTGTATATTTAAGGCCGTAATAAGTGTAAACACAGCACCAATAGTCCAACACAGATACTAGTAGTAGTGTGGTAAAAGGGTGAACTGAAGACCAAGAGGCAAAGGCGCCTGTGAGGCTGTGACTGAGAAGGTAGGAGTAGGAGAAGAGAAGCTTTGGGCGCCGCCATGGATGCATACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCGCGCAAGGAGCTCGCCCTCCTGCCGCCGCCTCAGGCGGCGTCGTCGTCGCCCACCGTGCCGGCAGCCCACTCGCCGTTCCTGCTGTCGAGGCAGAACTCCGGCCGCTGCCCCGCGCCGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCCCCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGGTACTACCGCCTTCGCAACCTCCATGCGTTCTCCAAGCCAGAAGGCATTTCAAAGTTCCAAAACGTTTCTTGCTTGCGCGTGTGAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGGTATATAATGCGATGTTGCAATGATGCTTCTTCCTTCTTTCATGGCGGGCTCGGTAGGACGCGATCTGATTGGCATTTTTGCATTGCTGTTCTTGGCAACGCGCCGCGCTGCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGTACGTTCGAAACGCGGCTTGAATGAAGAAATGCATGCGCGATTATGTTAAGCGCTCCAAATTAGTAGTAGTAGTATACTACTACGTTGCTTGTCACGACTGCTAGCCACCAACCTGCATGCATGTGAATTTGTTGTTCGTCGCTCCTCAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTATAAAAAGATTCAACCTTTACCTGCTCCTACCATTTGGACGCCCTGTTTGCCTGATGTTCAATGTTGCTTGCTAGAGCTGTAAGTTTTGATGGATGTTGGTTTGGTGTTCGTCAGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTAGTAAGCATAGATAGCATTGATCGAACTCGTTCTTTAGACGTCAATCAATCAAGTTCTCTTAACTTGCCAATATCCACTGTACATTGTCAGCTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGGTAGATTTTTACCATTATTGGCATTCTGCTTGCTCATGATTCTCAGACTAATGTCATTAACTCATGAACAACAAGCCTACAAATCTGCAATTATTCCGTGGCTGAAAGTTTGCTTCACCATTGTTTGTGCATGTATTTTGAGCAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGTTTGGCCATGCCACTACTTTGAGCAGTTGATTACTACTTGATTGTACTGGTCATTTCGTGATCACTTGCGATTGGAATGATTCGATCAAATGCAATGAGCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTGGCTGAAACCCTCTCCAGAAATCATAGTAAGCACTGCTTTATTCCCACTACGTTTCCCAATTATTAGGCTTCTACCCATCTAATTATGCTGCCATTTTTGCGTTCTTTCTTTTGGTGTTTATTTCTGTGCAGGAATACATGAAGCAAAGAAAGTGTTATCGGAATATAGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTTTCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAGAAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACTACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACTAGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAATTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTGTGGTTAATCCTGGAGGCAAGTGCCTGCCACACGTTC
More
|
||||||||||
| CDS seq | ATGGATGCATACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCGCGCAAGGAGCTCGCCCTCCTGCCGCCGCCTCAGGCGGCGTCGTCGTCGCCCACCGTGCCGGCAGCCCACTCGCCGTTCCTGCTGTCGAGGCAGAACTCCGGCCGCTGCCCCGCGCCGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCCCCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAA
More
|
||||||||||
| Protein seq | MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAEQQQCQDFLLRSKSQRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGEHNLPDSPFASSTKSTAFFTATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSEHGAIGM |
||||||||||
| Function | Zinc finger CCCH domain-containing protein 23 [UniProtKB/Swiss-Prot:Q10LZ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g21160 | LOC_Os03g21160.1 | Chr03 | 12068075 | 12071899 | + | MSU_osa1r7 | ||
| CDS seq | ATGGATGCATACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCGCGCAAGGAGCTCGCCCTCCTGCCGCCGCCTCAGGCGGCGTCGTCGTCGCCCACCGTGCCGGCAGCCCACTCGCCGTTCCTGCTGTCGAGGCAGAACTCCGGCCGCTGCCCCGCGCCGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCCCCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAA
More
|
|||||||
| Protein seq | MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAEQQQCQDFLLRSKSQRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGEHNLPDSPFASSTKSTAFFTATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSEHGAIGM
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os03g21160 | LOC_Os03g21160.2 | Chr03 | 12068075 | 12071899 | + | MSU_osa1r7 | ||
| CDS seq | ATGGATGCATACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCGCGCAAGGAGCTCGCCCTCCTGCCGCCGCCTCAGGCGGCGTCGTCGTCGCCCACCGTGCCGGCAGCCCACTCGCCGTTCCTGCTGTCGAGGCAGAACTCCGGCCGCTGCCCCGCGCCGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCCCCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAA
More
|
|||||||
| Protein seq | MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGGDALLDDFELQEQLAFLHDGAGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYARGFCKNGSTCRFVHGGLSDDAAMDATTAEQQQCQDFLLRSKSQRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQGDFCCMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLHSRRLIGLQLLDLKSSAAVHAAETTTMSLPTPITNAFTSGQPGATTIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGEHNLPDSPFASSTKSTAFFTATAATAIGSEGDFTTGSSCNIGGSAVGSANPLRPPTLDIPSPRTCFFPMPRLSEHGAIGM
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0329200 | RBH | 0.0 | 0.0 | 0.821183 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48410 | SBH | 2.284558 | 2.550245 | 3.374367 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0329200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016400 | RBH | 0.000000 | 0.000000 | 1.467932 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016240 | RBH | 0.0 | 0.000000 | 0.208319 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016260 | RBH | 0.0 | 5.125540 | 1.315426 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016250 | RBH | 0.0 | 0.225846 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016040 | RBH | 0.0 | 3.974891 | 0.775288 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0200000 | RBH | 3.0880915 | 2.4818175 | 10.733027 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0015920 | RBH | 0.0 | 0.264744 | 0.040783 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0204300 | RBH | 3.155404 | 0.547943 | 74.215679 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016180 | RBH | 0.000000 | 0.040195 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0016190 | RBH | 0.0 | 1.998707 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016230 | RBH | 0.0 | 5.283415 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0016110 | RBH | 0.0 | 0.078971 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0016030 | RBH | 0.0 | 2.170880 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G015990 | RBH | 0.0 | 1.955913 | 1.754607 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0015910 | RBH | 0.0 | 0.000000 | 0.277550 |
