Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g52270 | OGI:02090520 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:32001646-32003856 | ||||||||
| Gene Symbol | DJC22, OsDjC22, DjC22 | ||||||||||
| DNA seq | GTAACTAACAAGATATTTTGAAGTGCGTGCTGGCATTTCATATGGTATGTTAGTATGTTACACAAAGGGGCGACATGTATGTGTAACTTAGAACTCTTGCTTCGTGCAATCTACAACAACTGATCACCAAATAAGAATCATCTATGTTGTAGGATACCAGGATGAACTCAGCGTCATCATTTCCTCCCAAAAGTGGCAGGTCCGCATGACCGTGCTACATTTTGCAGATTACATGAGATTTTACAATGACACACACCATCCAAAGACAGCAGATGGATGCAGACTGTAGTACCCCTGAGTAAGATCACCATACTGAATGCCTTATGCCAAGGCCATTGCAAGTAAGGATTAAACCTTTGTGCCGGTTCAGATAGTCCTGAAAGAGTTATGAAAAATCAGAAGTGTCTTGTGCAACATAGATTTTCTTTCAGTGTGTGTGTGTGTGTTGGGTGGGGGTAGGAGGGCGGGGACTTACCACTACATTATGATCTTGAACATAAAGAATGCCTTTCTTGTCATACTCTCGCCTTTTGGCTGGATTACTGAGCACTGTGAAAAACAGTTATGGTATCATGAATGAGACCTGATATATCAAACTGAAGAACACTCTTTACAATGGGAAAGATTAGTTACGAAAAGATGCCCTGTCAGTGAGCACAGATAGTAACACCAATGCATATAAATTTATAAAGCTACGTGAATGTATCCAAGATGTTCAAGGTGCACCATAAATGTGGCTCAAGTGTGACAACGAACTAAGATCATGTTTCACATAATTTCTTAGCAATGATTCAATCACAGAGCTAGCCTGACTATAGATTATCTGAGCATTTTTGTGTTAAGCAATGAGCAATTTCTCCTGTTCGAAGTGCATTAGTCTCCAGAAGATTTGACAATCTACTTGACAAGAATACGAGGAAGCTATCTCCAACTGAATGCCGAGAGAAATTGGATTGTTTAATTAAGCACAACCCAGATTCCTAGTAACTACTAATCCATTGTAAATGAGGAAACACACGAATCATTGGCACCTAAACAATTTGAAAGAACAGCCAAACATCCTTTAGTCTTGTGGTAGCAATTCCTTGTATTTAAATTCAAGAATAACATCTTGGTCTCTTGGACATAGATGACATCAATTGTTCCATGTCTAGGCATCTCAGGAGTAATAGTTATGAAATTCACTAATACAGATAAATCTGCATGCAACCGAACATTAATATCTATTTTGATTTGCTGCTGGCAACTTATTATGTTAGCAAGAGACCAAAAAAACAAAGGTAAACTGCAGTACGGCACATACTATTTTCACATTGAAGTTAACATAGACATAGACGTATCAGATCAATTAAACAACTTCATTGCTCACCTTGGTATGCTTCATTAATCTCCTGAAATCTGGAGGTTGCATTTTCTTCGCCCTGCTTCTTGTCAGGGTGCCACTTCTGAATGAAGAGAGTGGACATCATTAGGCAGGCATTGGTGTAAACCATCACAAAAGTGGAATCCCTAGACTTGACGAGATAATTCATAGGACAATTCAAGAATGTGAAGCACAAAAGTGGAATTAGGCCAAACTTTACTTGACGAGATAATTCACAGGACGATTCAAGAATGTGAAGCACAAATACAGCACCGTGTTAGAGCAAACACTGACCAGTGCAAGACGTATATAGCTCGACCTGATCGCCTCTTCCGACGCATCATATCCCACTTCCAGAATCTTGTAGTAATCCTGCATTCACGAATCGGGGTCCCTGAGCCAATTCCCAATTGGGTAAAAGGAAACAGCACAATCGCAACCAGCGGGCGGCATTCCATCTACAAGATCCGCTCCCCCCAACACAAAAACAGCAATCATCTATCGCAATCCAAACGCCCGTGAGGGTTAACTCAGGTCATGAACAAACGTGCCACAGAAAAAAAAAAGATCGCGGCGGAGAAATCGAAGGAGAAGAGACGAGACGAGGCGTGGGCGTGGCGATTCCCACCTTGGGCTTGCAGAGGAGGGAGATGAAGTCGAAGTCGACGGGGACCTCCTCCCCCGGCCGCGCCGCCTCCTCGCCGTCCTCCTCCCACTCCCACCACATTCCCCTCCCCTCTCGCCGCGCCGCTTCGACGCAGCGCGCACCCGGGATTTCTCGGCCCGATTCGTGCCCGGAGAATCGCGCCGATTCCGGCGATTCTCCCGTCCCGTGAGATGGCTGGCGG
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| CDS seq | ATGTGGTGGGAGTGGGAGGAGGACGGCGAGGAGGCGGCGCGGCCGGGGGAGGAGGTCCCCGTCGACTTCGACTTCATCTCCCTCCTCTGCAAGCCCAAGGATTACTACAAGATTCTGGAAGTGGGATATGATGCGTCGGAAGAGGCGATCAGGTCGAGCTATATACGTCTTGCACTGAAGTGGCACCCTGACAAGAAGCAGGGCGAAGAAAATGCAACCTCCAGATTTCAGGAGATTAATGAAGCATACCAAGTGCTCAGTAATCCAGCCAAAAGGCGAGAGTATGACAAGAAAGGCATTCTTTATGTTCAAGATCATAATGTAGTGGACTATCTGAACCGGCACAAAGGTTTAATCCTTACTTGCAATGGCCTTGGCATAAGGCATTCAGTATGGTGA |
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| Protein seq | MWWEWEEDGEEAARPGEEVPVDFDFISLLCKPKDYYKILEVGYDASEEAIRSSYIRLALKWHPDKKQGEENATSRFQEINEAYQVLSNPAKRREYDKKGILYVQDHNVVDYLNRHKGLILTCNGLGIRHSVW |
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| Function | Chaperone protein DnaJ [UniProtKB/Swiss-Prot:A7MWW1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g52270 | LOC_Os02g52270.1 | Chr02 | 32001646 | 32003856 | - | MSU_osa1r7 | ||
| CDS seq | ATGTGGTGGGAGTGGGAGGAGGACGGCGAGGAGGCGGCGCGGCCGGGGGAGGAGGTCCCCGTCGACTTCGACTTCATCTCCCTCCTCTGCAAGCCCAAGGATTACTACAAGATTCTGGAAGTGGGATATGATGCGTCGGAAGAGGCGATCAGGTCGAGCTATATACGTCTTGCACTGAAGTGGCACCCTGACAAGAAGCAGGGCGAAGAAAATGCAACCTCCAGATTTCAGGAGATTAATGAAGCATACCAAGTGCTCAGTAATCCAGCCAAAAGGCGAGAGTATGACAAGAAAGGCATTCTTTATGTTCAAGATCATAATGTAGTGGACTATCTGAACCGGCACAAAGGTTTAATCCTTACTTGCAATGGCCTTGGCATAAGGCATTCAGTATGGTGA
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| Protein seq | MWWEWEEDGEEAARPGEEVPVDFDFISLLCKPKDYYKILEVGYDASEEAIRSSYIRLALKWHPDKKQGEENATSRFQEINEAYQVLSNPAKRREYDKKGILYVQDHNVVDYLNRHKGLILTCNGLGIRHSVW |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g52270 | LOC_Os02g52270.2 | Chr02 | 32001646 | 32003185 | - | MSU_osa1r7 | ||
| CDS seq | ATGAATTATCTCGTCAAGTCTAGGGATTCCACTTTTGTGATGGTTTACACCAATGCCTGCCTAATGATGTCCACTCTCTTCATTCAGAAGTGGCACCCTGACAAGAAGCAGGGCGAAGAAAATGCAACCTCCAGATTTCAGGAGATTAATGAAGCATACCAAGTGCTCAGTAATCCAGCCAAAAGGCGAGAGTATGACAAGAAAGGCATTCTTTATGTTCAAGATCATAATGTAGTGGACTATCTGAACCGGCACAAAGGTTTAATCCTTACTTGCAATGGCCTTGGCATAAGGCATTCAGTATGGTGA
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| Protein seq | MNYLVKSRDSTFVMVYTNACLMMSTLFIQKWHPDKKQGEENATSRFQEINEAYQVLSNPAKRREYDKKGILYVQDHNVVDYLNRHKGLILTCNGLGIRHSVW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.539992 | 1.878023 | 2.318053 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0760000 | RBH | 1.755587 | 2.162864 | 6.543337 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g13060 | SBH | 0.317525 | 0.273115 | 2.543155 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0760000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0034470 | RBH | 0.000000 | 9.070779 | 6.969312 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0034560 | RBH | 0.166622 | 1.099592 | 3.216976 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0034440 | RBH | 1.017262 | 16.793156 | 8.036066 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0034030 | RBH | 0.032774 | 0.431609 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0034090 | RBH | 20.206987 | 10.206861 | 6.238245 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0462400 | SBH | 9.992031 | 23.512663 | 66.133669 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0033910 | RBH | 0.345889 | 1.496906 | 2.113086 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0553200 | RBH | 6.0005845 | 1.591347 | 2.4022085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0034170 | RBH | 1.653282 | 0.388807 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0034000 | RBH | 0.881275 | 18.547646 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0034280 | RBH | 7.810769 | 19.129242 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0034200 | RBH | 2.420124 | 0.000000 | 2.927612 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0033780 | RBH | 0.351905 | 4.813612 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G034480 | RBH | 0.244879 | 8.679987 | 3.336183 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0034200 | RBH | 1.302715 | 28.559250 | 7.742388 |
