Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g29130 | OGI:02050150 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:17245021-17254879 | ||||||||
| Gene Symbol | TPR42, OsTPR042, TPR042, OsTPR42 | ||||||||||
| DNA seq | AGATTTGTATCATAATCAGTGATAATAGTTTGTTCATAATCAGCGATAATACTATTCTCCGCAAGTAAAAAAAGTACTAAGATATAATTATACGGTGTAATTGATACTAGCTGGTGGTCTGATGGGAGTCACAGAATACATGAACCTGGTGAAAACCTTCAGCAACTAGTGGCATGGCTGACGGCTTTGCAAACACAAGTGTTACTCATGTACAAAAGTTAGTTCTCTCTCGAACAGATAGGCAATTCAAGCAGCACGAGACGCCTTCAATGATTTCAAAGCCTCCCTGCACAGTAAGATTAAGACAATCTTATTCTACAAAGAGGAAACATACGGTATCTGCAAAGAGGATTGGGGCATGATCATTCTGCAGGTTTCACAGATTCAATTCAGCAGGAAAGTACAGCATATGTATGTATTGGCGTGGAACCACAGATGCGATGTGTATCATATCATGGTAGTATTATTGGTAGCAGTGTGAAGCATGTTTGCCGAAGGTTTCACATGGACAAGAGATAAAGTACGTTACCGTAGCGCATTTTCAATCTCAATATTCGCTGGGTCCAGTTTGAAACCATCAAGAAATGCATTGCAGGCCTTTTCATAGTCCTGAGAACAAAATAAGTGTTGTTTATGAATAAAAAAACGATTTTGCCAGAGCAAATAGCGGCAGCTTAGAAGTAAAATCAAACAGAATATTACATCTCACCTTCATGAACATGTGAGCGGTCCCTTCCCTGTAGCAGCCCTTGGGCCAATCAGGGCGCAATATCCTGCAAACTTGAGCAGTTTCCAAAGCATTCATTCCTTTACCCATCTTAAGCCAGCAAACGCTCGTGTTAGAGTACAAGGTCATATCTTCAGGGTCGTGCTCGATCGCCTAGAAAATACCAACAATTATCACAATTGCTTCCAAACCAACAGAGAGATATGACCGTTGAAGTGGTTTTGTAACAGATGAACATTCTGGTGTGACATCACTACAACTAAAGTTGTCTAGAAAATCTACATTGGGACATAGCAAATATACAAAGTCAACATCAGATTAGATTTTTATAGCGAAACACAAACATATACAAGTTACAAAATCCCATTTGACATTTTGTAACAAAGAGTTGCCAAGAATGCCAAGTGCTTCCCTTAATGGCTTAATGTATTGCTGTTACCAAATAGGCAAAAAGTAGTACAAACATTGTATTGGCTCATTATCACAATTGGGATTGTTTTCGTTAACAGACCTTGCAGGAAATTAGTATTGTATATAGTAACATAAATGTAAAAACACAAGATAATTTAAAATTAAAGCAGTAAAGGAATTAATAAAAACATGAAGGGTCAATTGCATATTTGCCATTAGATTGAACCGGTATTGTGAATTTGCCATTGAAAAAACTGTATTTGGTAATTTGCCACCGAAGCCAGTTTGAACCCAATCTACTTGCCATTGGATTGACAGCTTAGACTAACAGGGTTAAAAGGTCTGCTTTTCTAAAAATTAGGACAAGGATGCCCATGCCACAAATTGCAAAGTTGACATCATTTTGGCATAGACATCATCTTGACATGAGCATTGTAACAACCTAGTTCCACAGTCTTCCTTGCTGGTTGTTGCTGCTGCTGTTGATGTAGTGTTGCTGCTACATGCTACCGCCGTCACATGCTGCCGATGGTGTAGCCGGTGCCGCCTCCTGGTAATGGTGCTGGTGCTGCTGTTGTTGCTGCTGCTGCCGCCGACGCCGCTTAGTGCTGCTGCTGTCGCTGCCGCTGCCTGCTGCCGCCGCCCATCGGCCTGCTGCCACAGCGCCCGCCGACGCCACATGCCATCGCCGACACCCAGCTGCCGTCGCTTACCCATTCATGAGCTCTTCCATTGTCATCTCCTAATTCATTGCAACCGATTTTTGGTTGATCTGTTCTTATTTAGAAGGGTGATTTTTGGTTGATCTGTTCATGATTTAGAAGGGATGGGGGATTTGGGTTTTAGGGTTCATCAAGTGAGAAGGGATTGTTTCTAGCTTCTGTTGTGCACACAGCACACATAAGAGAGCCGATAGGGGATTGAATCTGAGAAAGATAAAATAGTCTTATCGTGTTACCCTTGTTTTTTACTTTAGTTTCCCCTTAACTGCACCAAATCAAACGGCAATGGCATACGCCATGTACATGCACCGATTTAAGTGGCAAATTTGCAATTGATGGTTTTATAATGGCTATTTTGAATTAGAGGGTGAAAGTAGTGGTATATTTGCAATTCTCCCAAACATGAATTACACTCTAATTTGAATTCTTGCTAGAGATTCAAAACGGTGCAGGTCATCAAATCATGAGTTGGCACACTATACAAGAGTTGGGTAATAGAATAGGGTGAAACGCAATACCATATTGTAGAGTTTTGCGGCAGTAAGATAGTCTTTTCTCATGTATGCCCTATTTCCTTCCAACTTCAGATCAGCTGGTCTTATTTTGAAGAAAGGGTCAACCTGAAATAATGAAAAGAAGCAGATGAAATAAAGTAGAGGACAAGCATGTAAAGGAAGTTATAAAGAGCTAATCAGTACGTAGATTTTTTGGTCATACCGCATTCTGAGATTTAATCTTTGTAAAGTGTGAACAACAAATACAACAGTTCAACTTTAGTGGTAGAAAGGTTGCACTAGTTTCCATGGTCTACTAGATTCATATTTCGAATATGCATCCATATTGTCTTAATTTGTAGTTATTAAATGGCTTGTTGATGATTGTGAGCTCTACATCCATCCCCTTCACTTCAAAAGATATTTGGATGGATCTATGCAAACAAAGAATCTTTTGTGAAGGATTGCATCATCTGCATGTCTATTTAAATTTACTTTCATAGACAAGAAGATTTTTTTAGAGAAAAAAAAAGAAGTCCAGGCGTAAGGGAATTTTCACTCAATGATCGTCAACAAACAGGACACTGGTGACATGACAATAAGACAATGGAATGGAAAACAAAAATCTCAAATCCACCTCAACATAGCGCACACCCCAAATTTTCACCAATTATATTGATCTAACAACTTCAGTTTGGTTGTACAAAAGAAACAAGAGAGTTCATGATACACAGTCATACTTGAAAAGGCGAAAAGGAGAATAAAAGGCTGTTACACTTCAAGTAGCAGTAGTTGAAACTTCAAGAAGCATACCAATTACCAAGAGACGAAGCATACAGATAATTGATTTCTTTTTCTACAATTGCTTCTAGATCCTTTAATATTTTTTCTACAATTGCATACGGATAATTTTTTTTATGACTAACCAATCGTGTTGCCCTTTTCAGTAGAGATTTGAATTTTGTATCAATCTTGAGTCAGGGACAGGGTTTGAAATTTCGGTTCGAAATTTCCGAAATTTCGCCCCCCACCAGCATTTGGTCAAATTTTATTAAAATTCATTCAAATTCAGTCAAATTTTCAAATAATTTCGGCCAGAAATTTCTGAAATTTGGGTAATTTCGGTCACCCCCGGCATAAAATCCCATTTCGAAATTGAAAACCCTGGTCAGGAAGATGTATTTTAAGAGTTTACATACAAAAAATGCTCTAGTGCAAATTAGGCAATCTTAATACTAAGCAATAACATCTATACTCCAAAAATCAAGTGGTTGTGGACTTGTGATAGTGAATCTGCCACCCACCACCAGCACATTGATTTTTTCCTTAATATTACATATTAAAGTTTCCATCTGCTGTTTTTAATTGTTTCGCATTCTTATCACAACTTAATATGAAAAGGTTCAAGTAGCCAGACATATTTTCATACATACATGTAGTTAGTTTTACAGTTCCTCTATAAATAGATAATTTTACAATTAGCAAGTGTAAACACCATGAATCCTTGAAATAAAAGTGAAGGGCTTGTTTGACGCAAGATAGCATTATTGCAAACAATATTAGGATATGTACGATTTTATTTTATTATATACGCAGCAAATGCATGGGTATTTAGGTAGCAGCCTTAAATATTACAATGGTGACCTAGTTCATACCTCCACCTGTTTGTTTACATAAGTAATCATCCCATCAACACTCCAATCATGCACAGATGGAATACGAGAAGTTACTGGAAGTAGGATCTCCACATCTTTCCTCCTGTTCTGACGTGCAGCAATTTCTATGGGCAGAAACCCAAACTGTTTAAAAATAGAACAGGACAGTTTACTAAGGGGAGAGATATTAACAAGTGCAGAAAGGTATAAATATAGCATGTATCCCAGGCGTTCACTACAAGAGCTGGTACGAATGAATTTTAGACATTACATGTTACAGCTCAAACGAGTGAGATGCACCCTTTAATGCTGCATCTTACTGTGGAAGCTATGAGCACATAAAATATCTGACTAAAACAAGACGAGAAAGAATGTTGCTCATCACATCACCAAAATTGTTGAATAACACATTGAAAATTATCTAAGCAGATTTCGAGTCATCTAAAGCTCAAAACTTATACACATTTTTTTTAGGGAAAAAACTTACACATTAAGCATTTCCAGTGCAAAATTAACTTTTTATTGGTATTTTTTACTGAAATAACTAAACAGTATAATATCATCTGTGAAGCCAAGCAAAGTGAGTGTCAGTTTCATTAGAAATTTCTGGCGCATGCATATAAACCAGCACACAGATCTACACACAATCCATGTATGATTTCAAAAGAAAAAAAATCCTTTTCTGAAAAGCTAGAAGATATATACCATAGCACAATAAAAAAACACTCTTGAAATAAGAACCTACACCATGCCGCTGAGGTTTCAACCATAACATAGCATATGACACCATTTGTGAGGCTGACATTAGAACTTCTAATATATTAGTGCAACCTTATTTCATAATTTAGCTTAGAGATTGCATGCAAGTAATTCAGCAAGTATGACGGATTGGTAAAGTTGCAAGTAAAATTGACTAGCAATTATTATAAAAATATATATATTGCATGCATAAATTCAGCTTGTCGTTATAAACCATCTAAAAAACGTGTACTGTAAATCTGAAACTAATCCAAGTGTAATTGCTCGGTTGTGCACCTAGAAATTATGTGCATGGGCATCATGAGCAAATTATTCTTAATAGACAAATTATTGTGTATCATGAGCAACTAGGATAGTTTGAATTCAAACATAAAATTAACAAATCATTCTTAACAGAAAAAACAGTATGTTTCTCTAAGAGGGGAAAAAAGAACGCGAGGAACAGTGCATTGTGCTAAAACCTCAATAGGTGTCAACACTACAGTCCTGTCATTAATGCATCTACATAGCTATCAATAAAACATTAGACGAATAGTAGTATGAGATCATAAAATAGACCATCTGATAGATATGAATATCAATAATATAATTTCCATGAGTGAAAACAACCACTCGATGTGCAGTGAAGAAAATTCAGTGAAAAAGGAAAAGAGTTACTTTATCAGGCACATCAGGATCAGCACCACCCTCCAGTAAGCACTTATAGAAATCAGTTAAGCCTTCAGTTGCAGCAACTATTAAGGGGGTAAAAGTACCAACACCCTTAACATCAGCACCAGCCTAACAAAAAACAAATGCAGATACTTTCTCTAAATAAGCATGTCATGATTTGTACAATATTTAAAACTTAAATATCCACCAAGTTTTGCCTTCTAAAGAGGAGTTCAATAATGTAATTTCAGTTTGGATTTGAAGAACAAGGTATATCACCTCAATCAAAAGCTTACAACATTTCAGTGAGCGACCCATCATCGCAGCAATGAGAGGTGTACAAACTGTAGAGAATGTCTTGTTACACTAATAAGACAATTAAGAAAAATTAGTGCCCATACATGTCGAAAGTAGAAGATGGTTTGCGGACAAAGAAAGAGGTATAAAAAGAATATCAAACCATGTCACCAAAATCACAAGTAAGTTTGCAGATATATAGGTACCATGCAAAAGCACATAAATCATATAAAGCATAGTTATCAGACCCAACACGATCGTATACTCAGCCCTGGATCACTGGGTCACCAGTTGGACCACATGTTTTGTTTTAGATATTTTTTGTATATCTGACAGACAAAAGAACACATACATTTATACACAGTTAAATTCCAGTGCAGGTATGTGATTTACAAATCACATTTACTCTAACCTATCATATAAGAACAATAAAAAAACCTTTAAATTTATCACTGTCTTGGTATTTGGGTACAATAAATGCAGATTAATCAGTTTCCTCTTATTCTTTCACTATAATACTACTCCCTCCGTCCCACTCACTAAGGCGCGCACGCATTTTAAAATTCAACTCTTCAAATATTTGAACAACAAATAGTTTATTGTAAATTAAATTTTATTTGATGAAAATAATATCATTGGATTGTCATTTAAATTTACTTTCATATGATTATGATTTTGTTGCTACAAATATTATAGTATATGAGAAATTTAAAGTCAAAGATTAGTCTTAAAGACCATGCCAAGTTTGACCGCGCCTTAGTGAGTGGGACAGAGGGAGTACTATTATGTCACAATAGCACATGCGGCACAGTTGGCAAGGCAGGCAACTGAATGCAAGCAGGGCATGCATTCAAACCGATCTATACGCATTTTTTTTGCAATTTTACGCAACAGAGGGTAGTTTGCGCCAGTCTGATCATAGATGGTTCACATAAAAAACAGTAATTTAACCAGTATTTTACTGATTCAACATGGACCGATTGCTTGAACTATCCGATTGGCTGGAGCAGACCCACCAAGGCTCTTGGTCCCGCTTTTTCTGGTCAAACTGCTGGTCCGATCTGGATTTTCTAACTGTAGCAGCAAGTCAAGAAATGCTTCACCCAGGTCACTCCACCGAAGTTGCACTTCCTCTGTCCCCATTATTAAGCCAAAATTTATTATCCTGTCTTCCAACATCTCAACTCCTTGATGCAACCAATTGCTAATAAGCAAGCCTTCCATCAGATGGAGGGCAGGGCCGTCGTAAACGTCAACAAAGACCTCAATGTTATGCAGCAGTTGAGTACCTCCTCTAGTCTCAAAGGCCTTGACATTGCACTATAAATAGCTTTCTTTTTAGTTCATCCATATTTACAACTAAATAATTGTTTTGTTTGGAGTTGAAAATACTCATTCCATCCAAATGACCTGAATTTTTTTCATCGCTGGCATTCCTTTCAGGGTAAGAAATTGATTGCTTATGACATTTACAGCAATAGACATTTTCTATCAGATCAAACAACAAACCAAAAGCCTGTGTGCAATATATAATAAACCAAACCAACAACTTCAGTCTGTACACAGCCTGGCAAACCACTACCAAGTATAGAGTATAGACCAATCTTACATGAATGTAGATGAAATTAAAATATATTATCTCGTAGCATGAACTATTTTAATGTAAGCGGCAAGCAAGGGAAGAAAAGCATATAACAAAGCTTACATCTGCATGGTGGTCCAACAAAATCTTCATACAACCATCCTGACTTTTTGAGGCAGCAACATGCAGTGGTGTCCCATGGTCAGAAGATGAATCAACATTAGCACCTTTCACCAGTAAGACCTTTACTATCTCGCAATGTCCTGAATTAGAAATATTGAGTATCCATTAGTGTAAGTGTGTAACGATGTAGAATATATAGCAAGCTATTTGTCACTGCAACAGTTTTATTGGTGAAATCTAGTAACTTTATTACCTATACAGAGACAATACCTTTTTCCCACCTAATGTCCATTTTGAACCGTGTTTTAACTGATATCTTCTGTGCCAGGAGAAATAACAAATGGGCCCGTGCTCACATGTTTTGACAACTAGTGATGAGAGCAACAGTTACAATACTAATATAAGTTGTTAGCTCCCCGAATTAGTAATAGTTGCCATCAACTATAACCCAACAAGTACTGGTTAAGTTGTTAAATGCATTATTGTTTAGCTTCAGCTAACTAATACTAGTTACTCTCTAACAACATGCATAAGCTTCCCCAACTTATCAAATAGTAAAAATGTATGTAACAGTACAAATTCTGTCAAAGATTTAGAGTTGACAACAATGAAAGACAGTTAGCAGGCAACCTTAGGTGCCACCTCATCCAGGTAATAGTTGTTCTGTGATTAGACATACATAGCTGCCACTCGAAAAAAAAAAAAGAACAAGAACATATCTATTACATCTCTAACATGCCCAGCACATATCATTATGCTCATTGTATAGAACACAACTGTGTACATGAATGCTAAACAGGTACTTGTGAAGGATACGTGATCATTTCAAAAAACAAAAGATAGCAACTTCAATGCTCCTCCTACTCTTTCTAATCTATTTCAATTCTCTTATTCCCTTTTCTTTGGCTCACAAAAACACATTAGCGACAAGGGGGGAAGGGGAATATGAAAGGAAATGATGGCATCCCCAGCTAAAAATGGAAGATGAAGAAATGCAAAAGGGCCATAAAAGATTAGAAGAAGTTTAGCACTAGAGTGCTAAAATACTAGTGGGAGTGATATTAGTAGCATAATAATTAGCATAACCATTTATAACAATATTACATGGGTCATTTCCTATTCCGAATTTATAATGGATAACCTACATTTTTTGCAACTTTCATTATTTGCAGTTCTCCTAACAATAAAAAATAATATAAAAAACAGTGTTGTGCAGCCATGCACATATAAAATAAAGGAAATGCATTGAGAGGGACCTTGTTCAACTGCTAGATGGAGAGGGGTACACCCTTTTTCATTTGGCTTATCTGGATTTGCACCATGATCAAGAAGATAGCTCACAGTATCCACAATCCCACCATAAATTGCATAACCAAGAGGCGTAGCGCCTATTGGAATCATTGAAAAAAAAATCAGATTTCTTGTAACAAGCAAAAGAAAATCCACACTGATCATTTTTCAGATTGCCTTGTGAAAGTATAGGATAGTAGATTTCCTGACATGTGGTAAAACAAAAGTGCATACTTTTAATTTCAGCTTGATAAGCGCCAAAAGAACAAAACTAAAATAATAAGTTTTTAAAGATGATTCATCAGAATTAAGAAATTACCTGCTCAATTTAATTACCTCATCGAGTTGCGTTATGCCTGTAACAGTACTAGTAACTCTTTCGGTTGAACTATGCACGTCAAAGTAACGTAAATCCAACTAACCCCAAACTCCGAGAATCGACTGTACGGCTGTAGTGTTTGCAAAGCCTCCAACTCACGGAGGCGCAACTAAGACCTCAATCTATAAAAAAAAATTTAAAAAAAAAGGGAAAAAAACGGGGATTCCTCTTCCACAAAACGAGGAGGCGAAGAGATCACCTAACTCATCGGCGGCGTCGATGTCCACCTGGAGCTCCTCGACCATGTACGCGCACATCGCGGTCCTCCCGTAGCGGGCGGCTTGGTGCAGAGCCCCAGCGCCGCGGTTCTTCACGGCCTCCACCGCCTCCTTGAGCCGCCCCTTCCCGCCGTCCAGCATACGAGCAAACTCTGCGAGCGGATCGGGGATAAAGGAAAAAAAAACACACATCCCAACCCCCAAATCAGCTCCCGATCGAGCACCAAAACGCAGCTAAACCATGCAATCCAAAAAGGGATTAAAAAAAACAGCGAAAAAGCAGCGGAGGAAGGGGCCCGGCCGGCGGAGCGAGCACGCACTCTTGAAGGCGGGGAGGTCGCCGGCGGCCGCCGACTGGATGAGCAGCTGCTGCGGTACGCCGGGGCCTGCAAGGGGAGGGAGAAGGAGGAATGGTTAGCCCGCGGGCAGGTAGGTGAAGCTAGGGTTTCGGGCTGCTTGCTCACCCAGTACGAAATGCGGCGCCATGGCGGTGGGTTTTTTGGGAGAGTGAGGCGGGAAGGCGAAGCTGCGGAAGTGGGGGTGGAAATGAG
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| CDS seq | ATGGCGCCGCATTTCGTACTGGGCCCCGGCGTACCGCAGCAGCTGCTCATCCAGTCGGCGGCCGCCGGCGACCTCCCCGCCTTCAAGAAGTTTGCTCGTATGCTGGACGGCGGGAAGGGGCGGCTCAAGGAGGCGGTGGAGGCCGTGAAGAACCGCGGCGCTGGGGCTCTGCACCAAGCCGCCCGCTACGGGAGGACCGCGATGTGCGCGTACATGGTCGAGGAGCTCCAGGTGGACATCGACGCCGCCGATGAGTTAGGACATTGCGAGATAGTAAAGGTCTTACTGGTGAAAGGTGCTAATGTTGATTCATCTTCTGACCATGGGACACCACTGCATGTTGCTGCCTCAAAAAGTCAGGATGGTTGTATGAAGATTTTGTTGGACCACCATGCAGATTGTAACAAGACATTCTCTACAGTTTGTACACCTCTCATTGCTGCGATGATGGGTCGCTCACTGAAATGTTGTAAGCTTTTGATTGAGGCTGGTGCTGATGTTAAGGGTGTTGGTACTTTTACCCCCTTAATAGTTGCTGCAACTGAAGGCTTAACTGATTTCTATAAGTGCTTACTGGAGGGTGGTGCTGATCCTGATGTGCCTGATAAATTTGGGTTTCTGCCCATAGAAATTGCTGCACGTCAGAACAGGAGGAAAGATGTGGAGATCCTACTTCCAGTAACTTCTCGTATTCCATCTGTGCATGATTGGAGTGTTGATGGGATGATTACTTATGTAAACAAACAGGTGGAGGTTGACCCTTTCTTCAAAATAAGACCAGCTGATCTGAAGTTGGAAGGAAATAGGGCATACATGAGAAAAGACTATCTTACTGCCGCAAAACTCTACAATATGGCGATCGAGCACGACCCTGAAGATATGACCTTGTACTCTAACACGAGCGTTTGCTGGCTTAAGATGGGTAAAGGAATGAATGCTTTGGAAACTGCTCAAGTTTGCAGGATATTGCGCCCTGATTGGCCCAAGGGCTGCTACAGGGAAGGGACCGCTCACATGTTCATGAAGGACTATGAAAAGGCCTGCAATGCATTTCTTGATGGTTTCAAACTGGACCCAGCGAATATTGAGATTGAAAATGCGCTACGGGAGGCTTTGAAATCATTGAAGGCGTCTCGTGCTGCTTGA
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| Protein seq | MAPHFVLGPGVPQQLLIQSAAAGDLPAFKKFARMLDGGKGRLKEAVEAVKNRGAGALHQAARYGRTAMCAYMVEELQVDIDAADELGHCEIVKVLLVKGANVDSSSDHGTPLHVAASKSQDGCMKILLDHHADCNKTFSTVCTPLIAAMMGRSLKCCKLLIEAGADVKGVGTFTPLIVAATEGLTDFYKCLLEGGADPDVPDKFGFLPIEIAARQNRRKDVEILLPVTSRIPSVHDWSVDGMITYVNKQVEVDPFFKIRPADLKLEGNRAYMRKDYLTAAKLYNMAIEHDPEDMTLYSNTSVCWLKMGKGMNALETAQVCRILRPDWPKGCYREGTAHMFMKDYEKACNAFLDGFKLDPANIEIENALREALKSLKASRAA |
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| Function | Hsp70-Hsp90 organizing protein [UniProtKB/Swiss-Prot:F8RP11] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g29130 | LOC_Os02g29130.1 | Chr02 | 17245021 | 17254879 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGCCGCATTTCGTACTGGGCCCCGGCGTACCGCAGCAGCTGCTCATCCAGTCGGCGGCCGCCGGCGACCTCCCCGCCTTCAAGAAGTTTGCTCGTATGCTGGACGGCGGGAAGGGGCGGCTCAAGGAGGCGGTGGAGGCCGTGAAGAACCGCGGCGCTGGGGCTCTGCACCAAGCCGCCCGCTACGGGAGGACCGCGATGTGCGCGTACATGGTCGAGGAGCTCCAGGTGGACATCGACGCCGCCGATGAGTTAGGACATTGCGAGATAGTAAAGGTCTTACTGGTGAAAGGTGCTAATGTTGATTCATCTTCTGACCATGGGACACCACTGCATGTTGCTGCCTCAAAAAGTCAGGATGGTTGTATGAAGATTTTGTTGGACCACCATGCAGATTGTAACAAGACATTCTCTACAGTTTGTACACCTCTCATTGCTGCGATGATGGGTCGCTCACTGAAATGTTGTAAGCTTTTGATTGAGGCTGGTGCTGATGTTAAGGGTGTTGGTACTTTTACCCCCTTAATAGTTGCTGCAACTGAAGGCTTAACTGATTTCTATAAGTGCTTACTGGAGGGTGGTGCTGATCCTGATGTGCCTGATAAATTTGGGTTTCTGCCCATAGAAATTGCTGCACGTCAGAACAGGAGGAAAGATGTGGAGATCCTACTTCCAGTAACTTCTCGTATTCCATCTGTGCATGATTGGAGTGTTGATGGGATGATTACTTATGTAAACAAACAGGTGGAGGTTGACCCTTTCTTCAAAATAAGACCAGCTGATCTGAAGTTGGAAGGAAATAGGGCATACATGAGAAAAGACTATCTTACTGCCGCAAAACTCTACAATATGGCGATCGAGCACGACCCTGAAGATATGACCTTGTACTCTAACACGAGCGTTTGCTGGCTTAAGATGGGTAAAGGAATGAATGCTTTGGAAACTGCTCAAGTTTGCAGGATATTGCGCCCTGATTGGCCCAAGGGCTGCTACAGGGAAGGGACCGCTCACATGTTCATGAAGGACTATGAAAAGGCCTGCAATGCATTTCTTGATGGTTTCAAACTGGACCCAGCGAATATTGAGATTGAAAATGCGCTACGGGAGGCTTTGAAATCATTGAAGGCGTCTCGTGCTGCTTGA
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| Protein seq | MAPHFVLGPGVPQQLLIQSAAAGDLPAFKKFARMLDGGKGRLKEAVEAVKNRGAGALHQAARYGRTAMCAYMVEELQVDIDAADELGHCEIVKVLLVKGANVDSSSDHGTPLHVAASKSQDGCMKILLDHHADCNKTFSTVCTPLIAAMMGRSLKCCKLLIEAGADVKGVGTFTPLIVAATEGLTDFYKCLLEGGADPDVPDKFGFLPIEIAARQNRRKDVEILLPVTSRIPSVHDWSVDGMITYVNKQVEVDPFFKIRPADLKLEGNRAYMRKDYLTAAKLYNMAIEHDPEDMTLYSNTSVCWLKMGKGMNALETAQVCRILRPDWPKGCYREGTAHMFMKDYEKACNAFLDGFKLDPANIEIENALREALKSLKASRAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g29130 | LOC_Os02g29130.2 | Chr02 | 17245021 | 17254879 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGCCGCATTTCGTACTGGGCCCCGGCGTACCGCAGCAGCTGCTCATCCAGTCGGCGGCCGCCGGCGACCTCCCCGCCTTCAAGAAGTTTGCTCGTATGCTGGACGGCGGGAAGGGGCGGCTCAAGGAGGCGGTGGAGGCCGTGAAGAACCGCGGCGCTGGGGCTCTGCACCAAGCCGCCCGCTACGGGAGGACCGCGATGTGCGCGTACATGGTCGAGGAGCTCCAGGTGGACATCGACGCCGCCGATGAGTTAGGACATTGCGAGATAGTAAAGGTCTTACTGGTGAAAGGTGCTAATGTTGATTCATCTTCTGACCATGGGACACCACTGCATGTTGCTGCCTCAAAAAGTCAGGATGGTTGTATGAAGATTTTGTTGGACCACCATGCAGATTGTAACAAGACATTCTCTACAGTTTGTACACCTCTCATTGCTGCGATGATGGGTCGCTCACTGAAATGTTGTAAGCTTTTGATTGAGGCTGGTGCTGATGTTAAGGGTGTTGGTACTTTTACCCCCTTAATAGTTGCTGCAACTGAAGGCTTAACTGATTTCTATAAGTGCTTACTGGAGGGTGGTGCTGATCCTGATGTGCCTGATAAATTTGGGTTTCTGCCCATAGAAATTGCTGCACGTCAGAACAGGAGGAAAGATGTGGAGATCCTACTTCCAGTAACTTCTCGTATTCCATCTGTGCATGATTGGAGTGTTGATGGGATGATTACTTATGTAAACAAACAGGTTGACCCTTTCTTCAAAATAAGACCAGCTGATCTGAAGTTGGAAGGAAATAGGGCATACATGAGAAAAGACTATCTTACTGCCGCAAAACTCTACAATATGGCGATCGAGCACGACCCTGAAGATATGACCTTGTACTCTAACACGAGCGTTTGCTGGCTTAAGATGGGTAAAGGAATGAATGCTTTGGAAACTGCTCAAGTTTGCAGGATATTGCGCCCTGATTGGCCCAAGGGCTGCTACAGGGAAGGGACCGCTCACATGTTCATGAAGGACTATGAAAAGGCCTGCAATGCATTTCTTGATGGTTTCAAACTGGACCCAGCGAATATTGAGATTGAAAATGCGCTACGGGAGGCTTTGAAATCATTGAAGGCGTCTCGTGCTGCTTGA
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| Protein seq | MAPHFVLGPGVPQQLLIQSAAAGDLPAFKKFARMLDGGKGRLKEAVEAVKNRGAGALHQAARYGRTAMCAYMVEELQVDIDAADELGHCEIVKVLLVKGANVDSSSDHGTPLHVAASKSQDGCMKILLDHHADCNKTFSTVCTPLIAAMMGRSLKCCKLLIEAGADVKGVGTFTPLIVAATEGLTDFYKCLLEGGADPDVPDKFGFLPIEIAARQNRRKDVEILLPVTSRIPSVHDWSVDGMITYVNKQVDPFFKIRPADLKLEGNRAYMRKDYLTAAKLYNMAIEHDPEDMTLYSNTSVCWLKMGKGMNALETAQVCRILRPDWPKGCYREGTAHMFMKDYEKACNAFLDGFKLDPANIEIENALREALKSLKASRAA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.227543 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0492900 | RBH | 0.0 | 0.0 | 0.883937 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0492900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0017660 | SBH | 0.0 | 0.0 | 0.803980 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0017790 | RBH | 0.0 | 0.0 | 0.485911 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0017700 | RBH | 0.0 | 0.0 | 1.130409 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0017610 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0017530 | RBH | 0.0 | 0.000000 | 5.401129 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0286600 | RBH | 0 | 0 | 1.274521 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0017310 | SBH | 0.0 | 0.0 | 0.401503 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0307900 | RBH | 0 | 0.0047485 | 12.2169555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0017810 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0017410 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0017950 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0017730 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0017440 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G017890 | SBH | 0.0 | 0.0 | 1.309286 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0017620 | SBH | 0.0 | 0.0 | 1.881160 |
