Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g16260 | OGI:02026350 | 12/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:9240040-9243853 | ||||||||
| Gene Symbol | rNBS41 | ||||||||||
| DNA seq | ATGGAGCTATGTTCCAATATTCCTGGGATTGGAAAGATGAAGTATTTACAGTGGCTGGAAGAGTACCATGTTAAGAAAGAGGACATTGGATTTGAACTGAGTGAGTTGGGGAATTTGACAGAGCTTGGAGGAGAGCTAAAGATATTTAACCTTGAAAATGTGGCAACAAGAGAAGAAGCAAATGATGCTAAATTGATATCGAAAAGGAATCTGAAAGCATTGACACTAGTTTGGAGTGCAAAGCAACTCTCCATAGGATCTGGCGTTCTTGATGGTCTGCAACCACATCCTAATCTTAGAGCACTTGACATACGAAACCATGGTGGTTCCACTGGACCTACTTGGTTGTGTGGTGATGTTTGTGTCAAAGGCTTGAAATCTCTCCATCTAGAAGGCTTATCTTGGGGAACTTTCCCACCTTTCGGGCAACTAATGCATCTGGAGGAACTTACTTTGATCAATATTGCTGGCATACGTAAGTTTGGACCTGATTTTGGTGGTGTTACCCAAAAGAGTTTTTTACACTTGAAGAAAATTAAATTTGTTGGCATGCCAGAACTTGTGGAGTGGGTTGGGGGAGCTCATTGGCATTTGTTTTCAAAGCTTGCAAGCATCAGATGTGAAGATTGTCCCAATTTCTCGGTGCTACTGTTGCCATTCTCTAAGTGCTCTGTCATTTGCACACAAGACATAAACACAGTATGGTTCCCAAACCTGTGTTCTCTTGAGATTCGAAATTGCTCCAAGTTGTCATTGCCACCCATGCCTCACAATACCATGCTAACACGTGTTACTGTGAAAGAAGATAATCAAGCAAAGCTGCATTTTGAAGAAGAGACACTGAGAATAGATGGTTATGGGGGTGCTTTGGCTTTCCATAACCTGGACAAAGTAAAAGATATGACAATTGAAAACATGTTCCACATTTCATTGACTGATCTCCAAAAGCTGAATTCATTAACAAGCCTTGATGTCACAGGATGCAAAAGCATGTTATCCAGTGAAGTAGACAATGGTTTTATCTTTTGTTCAGTTCAGCAACTCAATCTCAGAGATTGTCATCTTACCGAAAAATCATTGGGTAAGTTATTAAATTGTTTCCCAGCTCTTACCCATTTCTTCTTGAGCATGTTTCCTGAATCTGAAGAGGAAGAGGAAGTAGTACTGCGATTCCTATCGCCCAGCTCATTGCACGTTGCCTCAATCTCAAATCACAGGAATCTGGTTCTTCCAGTGGAGGATGTGGATGGAGGCTGTCTCCAACATCTCTCCTCACTCGAAACACTCGAGATCGATGGATGTGGCAACATGTTTTCTCAGTGGTCCATGGTAGAGGCAGGAGCTCAGACCAGGAAGCCCTTCCCTACTTCCCTCAAGGAACTCAGTATTGTGGGAGAGTCAAGCATGCAATCGATGGCTCCACTCTCAAACCTCACATCCCTCACCAGTTTAACACTAAAGCACTGTGTTAACTTAACCGTGGATGGGTTCAATCCTTTCATCACATACAGCCAATACTCTTATAAATAGAGAATTTTTACGGCAATAATAATCATCGCTGCTCCATAGCAACGGATATGTTCTCAGAGGTGGCAAGGACCAAAGTTATGCCTGCAGGTGGCTCCTTCCAACAGCTGGTACGACTTGATGTGGACAGTATCTCAGCAGTGTTTGTTGAAACCATTTGTAGCCTCCTCGCTGCGACCCTCATCGAGTTGAGATTCACGTCTGACTTGATTACAGAAAGCTTCACAGAAAAGCAGGAGCAGGTACTTCAGCTCCTTGCCTCCCTCCAATACCTAGAATTCTATGGGTGTTCTCGCCTAAAGTCCCTCCCTAAAGGGTTGCATCGCTTTTCTTCTCTCTATGGACTAGACATCTCTCGATGTCCTCAAAAAGAATGTTGCCAAAGGAGGGCTTCCCCGCTTCACTGCAAGATCTAAGTATGGAGGCATGCAGCATCAATCTAATGGATCAAGTCAAAAAATTAGAAGCATCAAACCCACATTTAAAAGTACATGATACATCAGTGACTTATATCGTGAGGTTAGTTCATCGAAAACCAACTTATTACCCTCAATTTTTGTGATTTTTTCTGCACTAGGCAGTAGGTACTAGCTAGCAACCACTGTGGCTTTCAGCCCCTATAGTCCATAGAGTTCCTTTATCTGTTATCTAACCAATGTTACATTAGTTGTACAATTATGGTAGTTTACTACTTCCTCTGCTATTACACTTTTTTTTCTTGAAACAGAAAGGTGAGAGCAAGATGTCTCAGGGGCAGAGGCACATTGACCCAGTATGGTCCACTGGGCACAATGTAAATTTGCTTCTCCCCTGTTGTCAGAGCCATGTGGATACATGATTTGCATTACCAGTGGGATCTCAACTCCTAAGCCGAACTGTCAGCAAGCCCAAGATAAACTCTTTATCTTGATCAGATCCTTTAAACCGAAGGTACTTTCAATTTCTTCCAAGTATTTCACTTTATCTTCGGTGTAATCACAATTTTCTGTCCTGAGGACTTGATTGATTGCCCCCCCCCCCCCTCCCAACTGCCCAAGTGGCACCGCACACCCACCCAAAGTATATAATAGTGTCAATATAGTTGGTATATGTCAGGGAATACAAGGCAGCGAATTGAAAGATTAAATGTACTCCCTCATTTTCATATTATAAGTCGTTTTGACTTTTTCTTAGTCAAACTTCTTTTAGTTTGATCAAATTTATAGAAAAACATAGTATCATTTTCAACACAAAACAAACATATCATCAACATATATTCAAAGTAAGATTTAGCGACCCCGCAAAAAAAAGTAAGATTTAGCGAAACCGATTTGATGTTTTAGACATTGCTTTTTTTTAATAAGTTTTATCAAATTTAAAAAGTTTAACTATGAAAAAAGTCAAAATAATTTATCATATAAAAGGGATGTCTACTTTTTCTTAGATGGTTAATGAAATAACCCTCGTGGTTAGATATTGTGTTTTGATGCTGATGGTGCTCATTTTATATGTGTTTTATTTTTCGGGAATACATTTTTATGTGTGTTTCGTACTCCTACTTTCAATAATGCACTTGCGATAGCGATACAATTATCTTGTTTTGTTGAGCATTAATGTAACATTTACAAATGAATGGTTCCTTTTGTACTAGATTCACCCTGGCGAGCCTTTTTCAGCCATGTAGTACGGCAAATGTCTGACGACATAATATAACTCCTCAAAATAACGTTAAATTAATTTGGGACTTGCTTTTGCATTTGCTTCCTCAAATCAAATTGTTTCCGTGAGTTCAACCTGGAGATTCTGCAGAACAGTTATTACAGTCCAATGCATTGTTTTTTCCAGGTGGTTTCCAAGACAAATTGGTGTTCCATCGGACGAGTAATGCAGCCGCCATCTGTCGTTATATCTTGACAGAGCCGAGAAGGAAAATCCTCCAGAGATTAGGCACCATTTGCATGGTCAGTTGATTCTCCATTAGTCCATTACCCTACCCTTGCTGCTCCTATAGAAGCTCAGAAGCGCTTGTTTTGCGATGAACCACTTACACTGTATCTGTTCATCATTGCAGGCTTGCAGCAACCGGATGGCGAGCAAGGTTACAGAGACGGCGCCGGGGGCCCTCTCCAATGGGCTGTGGCTTGCCTGGGCCGAATGCGCTCAAACAAATCAGCCCATGTGTGTGTTTGGGGTGGCCCAGGGGCCAGCCAGACTCTTGGGCTTCTCCTCTCTCTACTCCACCACGCATTGCAAGCAGAGAGGCGCGAGGTCTCTTCTTCCTCCACGCATGACGCCTCCGGATGAGTAG
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| CDS seq | ATGGAGCTATGTTCCAATATTCCTGGGATTGGAAAGATGAAGTATTTACAGTGGCTGGAAGAGTACCATGTTAAGAAAGAGGACATTGGATTTGAACTGAGTGAGTTGGGGAATTTGACAGAGCTTGGAGGAGAGCTAAAGATATTTAACCTTGAAAATGTGGCAACAAGAGAAGAAGCAAATGATGCTAAATTGATATCGAAAAGGAATCTGAAAGCATTGACACTAGTTTGGAGTGCAAAGCAACTCTCCATAGGATCTGGCGTTCTTGATGGTCTGCAACCACATCCTAATCTTAGAGCACTTGACATACGAAACCATGGTGGTTCCACTGGACCTACTTGGTTGTGTGGTGATGTTTGTGTCAAAGGCTTGAAATCTCTCCATCTAGAAGGCTTATCTTGGGGAACTTTCCCACCTTTCGGGCAACTAATGCATCTGGAGGAACTTACTTTGATCAATATTGCTGGCATACGTAAGTTTGGACCTGATTTTGGTGGTGTTACCCAAAAGAGTTTTTTACACTTGAAGAAAATTAAATTTGTTGGCATGCCAGAACTTGTGGAGTGGGTTGGGGGAGCTCATTGGCATTTGTTTTCAAAGCTTGCAAGCATCAGATGTGAAGATTGTCCCAATTTCTCGGTGCTACTGTTGCCATTCTCTAAGTGCTCTGTCATTTGCACACAAGACATAAACACAGTATGGTTCCCAAACCTGTGTTCTCTTGAGATTCGAAATTGCTCCAAGTTGTCATTGCCACCCATGCCTCACAATACCATGCTAACACGTGTTACTGTGAAAGAAGATAATCAAGCAAAGCTGCATTTTGAAGAAGAGACACTGAGAATAGATGGTTATGGGGGTGCTTTGGCTTTCCATAACCTGGACAAAGTAAAAGATATGACAATTGAAAACATGTTCCACATTTCATTGACTGATCTCCAAAAGCTGAATTCATTAACAAGCCTTGATGTCACAGGATGCAAAAGCATGTTATCCAGTGAAGTAGACAATGGTTTTATCTTTTGTTCAGTTCAGCAACTCAATCTCAGAGATTGTCATCTTACCGAAAAATCATTGGGTGGCTCCTTCCAACAGCTGGTACGACTTGATGTGGACAGTATCTCAGCAGTGTTTGTTGAAACCATTTGTAGCCTCCTCGCTGCGACCCTCATCGAGTTGAGATTCACGTCTGACTTGATTACAGAAAGCTTCACAGAAAAGCAGGAGCAGAAAGGTGAGAGCAAGATGTCTCAGGGGCAGAGGCACATTGACCCAGTATGGTCCACTGGGCACAATGCTTGCAGCAACCGGATGGCGAGCAAGGTTACAGAGACGGCGCCGGGGGCCCTCTCCAATGGGCTGTGGCTTGCCTGGGCCGAATGCGCTCAAACAAATCAGCCCATGTGTGTGTTTGGGGTGGCCCAGGGGCCAGCCAGACTCTTGGGCTTCTCCTCTCTCTACTCCACCACGCATTGCAAGCAGAGAGGCGCGAGGTCTCTTCTTCCTCCACGCATGACGCCTCCGGATGAGTAG
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| Protein seq | MELCSNIPGIGKMKYLQWLEEYHVKKEDIGFELSELGNLTELGGELKIFNLENVATREEANDAKLISKRNLKALTLVWSAKQLSIGSGVLDGLQPHPNLRALDIRNHGGSTGPTWLCGDVCVKGLKSLHLEGLSWGTFPPFGQLMHLEELTLINIAGIRKFGPDFGGVTQKSFLHLKKIKFVGMPELVEWVGGAHWHLFSKLASIRCEDCPNFSVLLLPFSKCSVICTQDINTVWFPNLCSLEIRNCSKLSLPPMPHNTMLTRVTVKEDNQAKLHFEEETLRIDGYGGALAFHNLDKVKDMTIENMFHISLTDLQKLNSLTSLDVTGCKSMLSSEVDNGFIFCSVQQLNLRDCHLTEKSLGGSFQQLVRLDVDSISAVFVETICSLLAATLIELRFTSDLITESFTEKQEQKGESKMSQGQRHIDPVWSTGHNACSNRMASKVTETAPGALSNGLWLAWAECAQTNQPMCVFGVAQGPARLLGFSSLYSTTHCKQRGARSLLPPRMTPPDE |
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| Function | Putative disease resistance protein At3g14460 [UniProtKB/Swiss-Prot:Q9LRR5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g16260 | LOC_Os02g16260.1 | Chr02 | 9240040 | 9243853 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGCTATGTTCCAATATTCCTGGGATTGGAAAGATGAAGTATTTACAGTGGCTGGAAGAGTACCATGTTAAGAAAGAGGACATTGGATTTGAACTGAGTGAGTTGGGGAATTTGACAGAGCTTGGAGGAGAGCTAAAGATATTTAACCTTGAAAATGTGGCAACAAGAGAAGAAGCAAATGATGCTAAATTGATATCGAAAAGGAATCTGAAAGCATTGACACTAGTTTGGAGTGCAAAGCAACTCTCCATAGGATCTGGCGTTCTTGATGGTCTGCAACCACATCCTAATCTTAGAGCACTTGACATACGAAACCATGGTGGTTCCACTGGACCTACTTGGTTGTGTGGTGATGTTTGTGTCAAAGGCTTGAAATCTCTCCATCTAGAAGGCTTATCTTGGGGAACTTTCCCACCTTTCGGGCAACTAATGCATCTGGAGGAACTTACTTTGATCAATATTGCTGGCATACGTAAGTTTGGACCTGATTTTGGTGGTGTTACCCAAAAGAGTTTTTTACACTTGAAGAAAATTAAATTTGTTGGCATGCCAGAACTTGTGGAGTGGGTTGGGGGAGCTCATTGGCATTTGTTTTCAAAGCTTGCAAGCATCAGATGTGAAGATTGTCCCAATTTCTCGGTGCTACTGTTGCCATTCTCTAAGTGCTCTGTCATTTGCACACAAGACATAAACACAGTATGGTTCCCAAACCTGTGTTCTCTTGAGATTCGAAATTGCTCCAAGTTGTCATTGCCACCCATGCCTCACAATACCATGCTAACACGTGTTACTGTGAAAGAAGATAATCAAGCAAAGCTGCATTTTGAAGAAGAGACACTGAGAATAGATGGTTATGGGGGTGCTTTGGCTTTCCATAACCTGGACAAAGTAAAAGATATGACAATTGAAAACATGTTCCACATTTCATTGACTGATCTCCAAAAGCTGAATTCATTAACAAGCCTTGATGTCACAGGATGCAAAAGCATGTTATCCAGTGAAGTAGACAATGGTTTTATCTTTTGTTCAGTTCAGCAACTCAATCTCAGAGATTGTCATCTTACCGAAAAATCATTGGGTGGCTCCTTCCAACAGCTGGTACGACTTGATGTGGACAGTATCTCAGCAGTGTTTGTTGAAACCATTTGTAGCCTCCTCGCTGCGACCCTCATCGAGTTGAGATTCACGTCTGACTTGATTACAGAAAGCTTCACAGAAAAGCAGGAGCAGAAAGGTGAGAGCAAGATGTCTCAGGGGCAGAGGCACATTGACCCAGTATGGTCCACTGGGCACAATGCTTGCAGCAACCGGATGGCGAGCAAGGTTACAGAGACGGCGCCGGGGGCCCTCTCCAATGGGCTGTGGCTTGCCTGGGCCGAATGCGCTCAAACAAATCAGCCCATGTGTGTGTTTGGGGTGGCCCAGGGGCCAGCCAGACTCTTGGGCTTCTCCTCTCTCTACTCCACCACGCATTGCAAGCAGAGAGGCGCGAGGTCTCTTCTTCCTCCACGCATGACGCCTCCGGATGAGTAG
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| Protein seq | MELCSNIPGIGKMKYLQWLEEYHVKKEDIGFELSELGNLTELGGELKIFNLENVATREEANDAKLISKRNLKALTLVWSAKQLSIGSGVLDGLQPHPNLRALDIRNHGGSTGPTWLCGDVCVKGLKSLHLEGLSWGTFPPFGQLMHLEELTLINIAGIRKFGPDFGGVTQKSFLHLKKIKFVGMPELVEWVGGAHWHLFSKLASIRCEDCPNFSVLLLPFSKCSVICTQDINTVWFPNLCSLEIRNCSKLSLPPMPHNTMLTRVTVKEDNQAKLHFEEETLRIDGYGGALAFHNLDKVKDMTIENMFHISLTDLQKLNSLTSLDVTGCKSMLSSEVDNGFIFCSVQQLNLRDCHLTEKSLGGSFQQLVRLDVDSISAVFVETICSLLAATLIELRFTSDLITESFTEKQEQKGESKMSQGQRHIDPVWSTGHNACSNRMASKVTETAPGALSNGLWLAWAECAQTNQPMCVFGVAQGPARLLGFSSLYSTTHCKQRGARSLLPPRMTPPDE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0262800 | SBH | 0.685138 | 1.192483 | 0.394301 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g16100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0262800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0011430 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0011560 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0011400 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0011270 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0011260 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0149400 | SBH | 0.1593055 | 3.9488745 | 0.7156845 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0011090 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0158100 | SBH | 0.3555095 | 6.991767 | 1.9984055 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0011600 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0011200 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0011570 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0011510 | RBH | 0.000000 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0011190 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G011560 | SBH | 0.0 | 0.0 | 0.089194 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0011370 | SBH | 0.0 | 4.645555 | 0.0 |
