Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g72730 | OGI:01123710 | 15/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:42202447-42203895 | ||||||||
| Gene Symbol | CYP71AA2, OsCYP71AA2 | ||||||||||
| DNA seq | ATGGCCACTCCCGGTCATCGGCAGCATGCACTGACTGCTCGGCTCGCTGCCGCACCACGCCCTGCCTGCGCCGTCGAGTTGCTCAGCCCAAGGCGCGCCCGCTCCTTCCGCCGCGTCCGCGAGGCCGAGCCGGCGAGGCTCGTGCGCGCCGTCGCCGCGTCCCCGGCGTGGCCGCTCGTGAACGTCGTCGGCGGCGAGCATGTCGCGGCCATGATGACCGCCGTCGGCGCGCGGCCGGTGCCCGCGGCAGGAGGAGTACCTGGAGGAGCTGGGCAAGGTGGCGAAGCTCGCCGCCGGCTTCAACCTGGTCGACCTGTTCCCGGAGTCGCGGCTCGTGCGGGCAGCGCAAGCGGCCCACGGGAAGATCCACAGCATCATGGACGCCATGGTCCAGGACCATCTGAAGGCGATGGAGGAGCGCAGAGAGGAAGTCGCAGATGGCGTCGTCGACGACGGCGACGGCGACGGCGCCGATAGGGATGAAGAGCTCCTTAGCATCCTACTGAGGTTTCAGAGGGATGGTGGGTTAGGGATCACTCTCACAAACGGAAACCATCAGCGCGACAGTGTTTGTAATTAATTAAGCATGTTACCATCTCACTCTAGCTCATTTGTCAATGTCACCCGCGAAAGGTTTGTCTCACTCTTTTTGTATTTTGCGGGAACGTCCTTTTTTTCATGCTAGTTAAATAGTTATAAAAAAAAGCAAAGATAGTTTGATATTTGATATATCACCTCACAAGTATATATACAAATTCAAATTTGACTTCTTAATGTTGTAACAAAATAATGTAATATGATTTAATAGTACCAGATAATAACTTCTAGCTAGTCTAGTTTTGTAAAGTCCTGTGTAGATACCATCTCATATCTATAATTTTAGGGTATCTTGGCTGGCGGCTCTGATACAACAACTACAACTGTTATGTGGGCTATGTCCGAGCTATTGAGGTGCCCTCGCGCAATGCAAGGTAGAAACAAGGTGGATGAGGCATACATATTGGAGGGTCCCTTCAATATTACATGCAATTGGTCATCAAAGAAACGTTAAGATTGCACCTTCCATTCCCTTTGCTTTTCCCAAGGTTATGTACCGAAACATGCAAGATAATGGGATTTGATGTACCCAAAGGAACGATAGTCATTGTAAATAATTGGGCGATTAGTAGGGATGAGCGATGCTGGGAAGATGCGGAGGATTTTTGACCTGAGAGGTTTGAACATGACGATACCGATTATAATGGTACATATTTTCAGTTTCTTTCAGGTGGTTTTGGTCGAAGGATGTTCCCAGATTTCATATTTGCACAATTTAACATCGAGATTGCACTCGCAAACCTTCTATACCATTTCGATTGGGAATTGCCATGTAGTGAAAACCGAATGGAGTTGGATATGACTGAGTCCGCTGGGTTGACAGCTTCTCGGCTTACTGATCTTTTTGGCTAA
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| CDS seq | ATGGCCACTCCCGGTCATCGGCAGCATGCACTGACTGCTCGGCTCGCTGCCGCACCACGCCCTGCCTGCGCCGTCGAGTTGCTCAGCCCAAGGCGCGCCCGCTCCTTCCGCCGCGTCCGCGAGGCCGAGCCGGCGAGGCTCGAGGAGTACCTGGAGGAGCTGGGCAAGGTGGCGAAGCTCGCCGCCGGCTTCAACCTGGTCGACCTGTTCCCGGAGTCGCGGCTCGTGCGGGCAGCGCAAGCGGCCCACGGGAAGATCCACAGCATCATGGACGCCATGGTCCAGGACCATCTGAAGGCGATGGAGGAGCGCAGAGAGGAAGTCGCAGATGGCGTCGTCGACGACGGCGACGGCGACGGCGCCGATAGGGATGAAGAGCTCCTTAGCATCCTACTGAGGTTTCAGAGGGATGGTGGGTTAGGGATCACTCTCACAAACGGAAACCATCAGCGCGACAGTTTTCTTTCAGGTGGTTTTGGTCGAAGGATGTTCCCAGATTTCATATTTGCACAATTTAACATCGAGATTGCACTCGCAAACCTTCTATACCATTTCGATTGGGAATTGCCATGTAGTGAAAACCGAATGGAGTTGGATATGACTGAGTCCGCTGGGTTGACAGCTTCTCGGCTTACTGATCTTTTTGGCTAA
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| Protein seq | MATPGHRQHALTARLAAAPRPACAVELLSPRRARSFRRVREAEPARLEEYLEELGKVAKLAAGFNLVDLFPESRLVRAAQAAHGKIHSIMDAMVQDHLKAMEERREEVADGVVDDGDGDGADRDEELLSILLRFQRDGGLGITLTNGNHQRDSFLSGGFGRRMFPDFIFAQFNIEIALANLLYHFDWELPCSENRMELDMTESAGLTASRLTDLFG |
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| Function | Cytochrome P450 71D10 [UniProtKB/Swiss-Prot:O48923] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g72730 | LOC_Os01g72730.1 | Chr01 | 42202447 | 42203895 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCCACTCCCGGTCATCGGCAGCATGCACTGACTGCTCGGCTCGCTGCCGCACCACGCCCTGCCTGCGCCGTCGAGTTGCTCAGCCCAAGGCGCGCCCGCTCCTTCCGCCGCGTCCGCGAGGCCGAGCCGGCGAGGCTCGAGGAGTACCTGGAGGAGCTGGGCAAGGTGGCGAAGCTCGCCGCCGGCTTCAACCTGGTCGACCTGTTCCCGGAGTCGCGGCTCGTGCGGGCAGCGCAAGCGGCCCACGGGAAGATCCACAGCATCATGGACGCCATGGTCCAGGACCATCTGAAGGCGATGGAGGAGCGCAGAGAGGAAGTCGCAGATGGCGTCGTCGACGACGGCGACGGCGACGGCGCCGATAGGGATGAAGAGCTCCTTAGCATCCTACTGAGGTTTCAGAGGGATGGTGGGTTAGGGATCACTCTCACAAACGGAAACCATCAGCGCGACAGTTTTCTTTCAGGTGGTTTTGGTCGAAGGATGTTCCCAGATTTCATATTTGCACAATTTAACATCGAGATTGCACTCGCAAACCTTCTATACCATTTCGATTGGGAATTGCCATGTAGTGAAAACCGAATGGAGTTGGATATGACTGAGTCCGCTGGGTTGACAGCTTCTCGGCTTACTGATCTTTTTGGCTAA
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| Protein seq | MATPGHRQHALTARLAAAPRPACAVELLSPRRARSFRRVREAEPARLEEYLEELGKVAKLAAGFNLVDLFPESRLVRAAQAAHGKIHSIMDAMVQDHLKAMEERREEVADGVVDDGDGDGADRDEELLSILLRFQRDGGLGITLTNGNHQRDSFLSGGFGRRMFPDFIFAQFNIEIALANLLYHFDWELPCSENRMELDMTESAGLTASRLTDLFG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0957800 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72740 | SBH | 0.0 | 0.0 | 0.090516 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0957800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0047610 | SBH | 0.0 | 24.023346 | 0.527100 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0047100 | SBH | 0.0 | 0.0 | 0.069794 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0047560 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0046980 | SBH | 0.0 | 0.095992 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0046490 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0691800 | RBH | 0.0368855 | 0.307493 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0046000 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0693400 | RBH | 0.2078075 | 0.033162 | 0.0100245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0046590 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0046430 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046760 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046760 | SBH | 0.0 | 0.725812 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0046530 | SBH | 0.0 | 0.592594 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G046790 | SBH | 0.0 | 0.0 | 0.302950 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
