Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g72270 | OGI:01122820 | 8/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:41900002-41901651 | ||||||||
| Gene Symbol | CYP94E2, OsCYP94E2 | ||||||||||
| DNA seq | CTATGCATGGGACAACACGCCCCTGCGCCTCGTGAGCAGTACACGGAGCCCGCCCTTCATCCTCAGCGTCACCGCCGTCTCGTGCGGCGGCGGCGACGGCGGCGCATTCGCCGCCGCGGCAGGCACCACCTCGACGGAGAATCTCCGGACCACGGCGGCCGCCACGGCCTTCATCTGCACGTACGCCATCTCCTTCCCGAGGCACGAGCGCGGCCCGGCGTGGAACACCGGGTACCGCGCCGCGTCCACCGCCACGAACCGCCCGCCGCCGCCGCCGCCGCCGTCGAGCCACCGCTCCGGGCGGAACTCGCCGCAGTCTCGCTCCCACAGCTGCGGCATCCTCCCCATCGCGTACGACGAGTAGTCGGCGAACCACCCGGCGCGCACCACCGTGCCGTCGGGGAGCACGTCGTCCGCCGCCGCCACCCGCGACGCCAGGGGCACCGGCGGGTACAGCCGCATCGTCTCGGTGATCGCCGCGTGGAGGTAGTGCATCCGCTTCAGCTCCTCGTACCCGTCGTCTCTCTCGTCGCCGGCGGTGTCGCCACGCAGGGCGGTGACCTCCTCGTAGACGCGCCGCTCGCACTCCGGGTTGGCGGCGAGAAACCAGAACAGCCATGTTAGGGCCGAGGACGTGGTGTCCTTCCCGGCGAGGACGAAGGTCTTGACGGTGTCGCGCAGGAACCGGCGTTTCGCCTCCGGCGAGTCGAACATCGCGCCGAGCTCGTTGCCGCCGTCTTCCTCCATCATCGCCGCCGTGAAGCGTGACAGCAAGTCCGACTCCTCTTCACTGTCACTGCACCGTTGCTTCGACTCCATGATCGCCGTCACGTACTCGTCGACGACGCCGATCGCCTGACGGAGCCGCCGCTCGCTGCCGACGTCGAGGAGCTTCATCGCCTTCCACGCCAAGGTCGTCGGGTGCAATATGCGGCCGAAGGAGATATCAATGGCGTCATCGAACGCCGCGAAGAACGCGTCGTCCCGGCCATCGCCGCCGGCTTCCAGCCGCGACGGCGACGACGACGACGGCGAGCTGTCGTCCCGGTCCACGCCGAACGCGACGCTGCAGATGTTGTCGAAGGCGAAGCGCTTGAGCACATCCTGAAGGTCGAAGACGCGCCGGGCGTCAGCGGCGGCGTCAAAGAACAGCAGGAGACGGCGGCGCAGCTGGTCCAGAACGACGCGGCCGGCGAAGAGGCGGAGCAAGCGCGGGGAGAAGGAGCTGGCGGCGAGCTTCCGCTGCAGCCTCCATAGGCGGCCGTTGGCGAGGAAGAGGCCGTCGCCGAGGAGGTCGGCGAAGGCGTCGCGGACGCGGTCGCCCTTGTCGACGTAGTTGTGGAAGCTGGCGCGCAGCATGTGTTCGACGGCGTCGGGGCTCGCCGTAGCGACGCCGCAGTAGCCGAGGCCGAGCGGGCCGTGCACCTGCATGGTGGATGCCGGTGCCGCGGCGAGGAGGCCCGTGGACCAGTCGAGGAAGCGGTGGCCATTGGCGAGGAAGGCGACGAGGTTGCCGAGGATTGGGTTCGCCTGCGGCCGGTGGTTCGACGTGGTTTGGCAGCGCCGCCACAGCGAGAGGAGTAGGACGACGGCGACGACGACGGCGGCGGCGGCGGCGGGGAGGACGAGGTGGAGGTAGGAAGAGTCCAT
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| CDS seq | ATGGACTCTTCCTACCTCCACCTCGTCCTCCCCGCCGCCGCCGCCGCCGTCGTCGTCGCCGTCGTCCTACTCCTCTCGCTGTGGCGGCGCTGCCAAACCACGTCGAACCACCGGCCGCAGGCGAACCCAATCCTCGGCAACCTCGTCGCCTTCCTCGCCAATGGCCACCGCTTCCTCGACTGGTCCACGGGCCTCCTCGCCGCGGCACCGGCATCCACCATGCAGGTGCACGGCCCGCTCGGCCTCGGCTACTGCGGCGTCGCTACGGCGAGCCCCGACGCCGTCGAACACATGCTGCGCGCCAGCTTCCACAACTACGTCGACAAGGGCGACCGCGTCCGCGACGCCTTCGCCGACCTCCTCGGCGACGGCCTCTTCCTCGCCAACGGCCGCCTATGGAGGCTGCAGCGGAAGCTCGCCGCCAGCTCCTTCTCCCCGCGCTTGCTCCGCCTCTTCGCCGGCCGCGTCGTTCTGGACCAGCTGCGCCGCCGTCTCCTGCTGTTCTTTGACGCCGCCGCTGACGCCCGGCGCGTCTTCGACCTTCAGGATGTGCTCAAGCGCTTCGCCTTCGACAACATCTGCAGCGTCGCGTTCGGCGTGGACCGGGACGACAGCTCGCCGTCGTCGTCGTCGCCGTCGCGGCTGGAAGCCGGCGGCGATGGCCGGGACGACGCGTTCTTCGCGGCGTTCGATGACGCCATTGATATCTCCTTCGGCCGCATATTGCACCCGACGACCTTGGCGTGGAAGGCGATGAAGCTCCTCGACGTCGGCAGCGAGCGGCGGCTCCGTCAGGCGATCGGCGTCGTCGACGAGTACGTGACGGCGATCATGGAGTCGAAGCAACGGTGCAGTGACAGTGAAGAGGAGTCGGACTTGCTGTCACGCTTCACGGCGGCGATGATGGAGGAAGACGGCGGCAACGAGCTCGGCGCGATGTTCGACTCGCCGGAGGCGAAACGCCGGTTCCTGCGCGACACCGTCAAGACCTTCGTCCTCGCCGGGAAGGACACCACGTCCTCGGCCCTAACATGGCTGTTCTGGTTTCTCGCCGCCAACCCGGAGTGCGAGCGGCGCGTCTACGAGGAGGTCACCGCCCTGCGTGGCGACACCGCCGGCGACGAGAGAGACGACGGGTACGAGGAGCTGAAGCGGATGCACTACCTCCACGCGGCGATCACCGAGACGATGCGGCTGTACCCGCCGGTGCCCCTGGCGTCGCGGGTGGCGGCGGCGGACGACGTGCTCCCCGACGGCACGGTGGTGCGCGCCGGGTGGTTCGCCGACTACTCGTCGTACGCGATGGGGAGGATGCCGCAGCTGTGGGAGCGAGACTGCGGCGAGTTCCGCCCGGAGCGGTGGCTCGACGGCGGCGGCGGCGGCGGCGGGCGGTTCGTGGCGGTGGACGCGGCGCGGTACCCGGTGTTCCACGCCGGGCCGCGCTCGTGCCTCGGGAAGGAGATGGCGTACGTGCAGATGAAGGCCGTGGCGGCCGCCGTGGTCCGGAGATTCTCCGTCGAGGTGGTGCCTGCCGCGGCGGCGAATGCGCCGCCGTCGCCGCCGCCGCACGAGACGGCGGTGACGCTGAGGATGAAGGGCGGGCTCCGTGTACTGCTCACGAGGCGCAGGGGCGTGTTGTCCCATGCATAG
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| Protein seq | MDSSYLHLVLPAAAAAVVVAVVLLLSLWRRCQTTSNHRPQANPILGNLVAFLANGHRFLDWSTGLLAAAPASTMQVHGPLGLGYCGVATASPDAVEHMLRASFHNYVDKGDRVRDAFADLLGDGLFLANGRLWRLQRKLAASSFSPRLLRLFAGRVVLDQLRRRLLLFFDAAADARRVFDLQDVLKRFAFDNICSVAFGVDRDDSSPSSSSPSRLEAGGDGRDDAFFAAFDDAIDISFGRILHPTTLAWKAMKLLDVGSERRLRQAIGVVDEYVTAIMESKQRCSDSEEESDLLSRFTAAMMEEDGGNELGAMFDSPEAKRRFLRDTVKTFVLAGKDTTSSALTWLFWFLAANPECERRVYEEVTALRGDTAGDERDDGYEELKRMHYLHAAITETMRLYPPVPLASRVAAADDVLPDGTVVRAGWFADYSSYAMGRMPQLWERDCGEFRPERWLDGGGGGGGRFVAVDAARYPVFHAGPRSCLGKEMAYVQMKAVAAAVVRRFSVEVVPAAAANAPPSPPPHETAVTLRMKGGLRVLLTRRRGVLSHA |
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| Function | Cytochrome P450 94A1 [UniProtKB/Swiss-Prot:O81117] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g72270 | LOC_Os01g72270.1 | Chr01 | 41900002 | 41901651 | - | MSU_osa1r7 | ||
| CDS seq | ATGGACTCTTCCTACCTCCACCTCGTCCTCCCCGCCGCCGCCGCCGCCGTCGTCGTCGCCGTCGTCCTACTCCTCTCGCTGTGGCGGCGCTGCCAAACCACGTCGAACCACCGGCCGCAGGCGAACCCAATCCTCGGCAACCTCGTCGCCTTCCTCGCCAATGGCCACCGCTTCCTCGACTGGTCCACGGGCCTCCTCGCCGCGGCACCGGCATCCACCATGCAGGTGCACGGCCCGCTCGGCCTCGGCTACTGCGGCGTCGCTACGGCGAGCCCCGACGCCGTCGAACACATGCTGCGCGCCAGCTTCCACAACTACGTCGACAAGGGCGACCGCGTCCGCGACGCCTTCGCCGACCTCCTCGGCGACGGCCTCTTCCTCGCCAACGGCCGCCTATGGAGGCTGCAGCGGAAGCTCGCCGCCAGCTCCTTCTCCCCGCGCTTGCTCCGCCTCTTCGCCGGCCGCGTCGTTCTGGACCAGCTGCGCCGCCGTCTCCTGCTGTTCTTTGACGCCGCCGCTGACGCCCGGCGCGTCTTCGACCTTCAGGATGTGCTCAAGCGCTTCGCCTTCGACAACATCTGCAGCGTCGCGTTCGGCGTGGACCGGGACGACAGCTCGCCGTCGTCGTCGTCGCCGTCGCGGCTGGAAGCCGGCGGCGATGGCCGGGACGACGCGTTCTTCGCGGCGTTCGATGACGCCATTGATATCTCCTTCGGCCGCATATTGCACCCGACGACCTTGGCGTGGAAGGCGATGAAGCTCCTCGACGTCGGCAGCGAGCGGCGGCTCCGTCAGGCGATCGGCGTCGTCGACGAGTACGTGACGGCGATCATGGAGTCGAAGCAACGGTGCAGTGACAGTGAAGAGGAGTCGGACTTGCTGTCACGCTTCACGGCGGCGATGATGGAGGAAGACGGCGGCAACGAGCTCGGCGCGATGTTCGACTCGCCGGAGGCGAAACGCCGGTTCCTGCGCGACACCGTCAAGACCTTCGTCCTCGCCGGGAAGGACACCACGTCCTCGGCCCTAACATGGCTGTTCTGGTTTCTCGCCGCCAACCCGGAGTGCGAGCGGCGCGTCTACGAGGAGGTCACCGCCCTGCGTGGCGACACCGCCGGCGACGAGAGAGACGACGGGTACGAGGAGCTGAAGCGGATGCACTACCTCCACGCGGCGATCACCGAGACGATGCGGCTGTACCCGCCGGTGCCCCTGGCGTCGCGGGTGGCGGCGGCGGACGACGTGCTCCCCGACGGCACGGTGGTGCGCGCCGGGTGGTTCGCCGACTACTCGTCGTACGCGATGGGGAGGATGCCGCAGCTGTGGGAGCGAGACTGCGGCGAGTTCCGCCCGGAGCGGTGGCTCGACGGCGGCGGCGGCGGCGGCGGGCGGTTCGTGGCGGTGGACGCGGCGCGGTACCCGGTGTTCCACGCCGGGCCGCGCTCGTGCCTCGGGAAGGAGATGGCGTACGTGCAGATGAAGGCCGTGGCGGCCGCCGTGGTCCGGAGATTCTCCGTCGAGGTGGTGCCTGCCGCGGCGGCGAATGCGCCGCCGTCGCCGCCGCCGCACGAGACGGCGGTGACGCTGAGGATGAAGGGCGGGCTCCGTGTACTGCTCACGAGGCGCAGGGGCGTGTTGTCCCATGCATAG
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| Protein seq | MDSSYLHLVLPAAAAAVVVAVVLLLSLWRRCQTTSNHRPQANPILGNLVAFLANGHRFLDWSTGLLAAAPASTMQVHGPLGLGYCGVATASPDAVEHMLRASFHNYVDKGDRVRDAFADLLGDGLFLANGRLWRLQRKLAASSFSPRLLRLFAGRVVLDQLRRRLLLFFDAAADARRVFDLQDVLKRFAFDNICSVAFGVDRDDSSPSSSSPSRLEAGGDGRDDAFFAAFDDAIDISFGRILHPTTLAWKAMKLLDVGSERRLRQAIGVVDEYVTAIMESKQRCSDSEEESDLLSRFTAAMMEEDGGNELGAMFDSPEAKRRFLRDTVKTFVLAGKDTTSSALTWLFWFLAANPECERRVYEEVTALRGDTAGDERDDGYEELKRMHYLHAAITETMRLYPPVPLASRVAAADDVLPDGTVVRAGWFADYSSYAMGRMPQLWERDCGEFRPERWLDGGGGGGGRFVAVDAARYPVFHAGPRSCLGKEMAYVQMKAVAAAVVRRFSVEVVPAAAANAPPSPPPHETAVTLRMKGGLRVLLTRRRGVLSHA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0951500 | SBH | 0.533329 | 1.785068 | 0.327507 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g31740 | SBH | 0.328637 | 0.173339 | 0.004974 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0951500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0047190 | SBH | 0.0 | 0.0 | 1.261476 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0046720 | SBH | 0.0 | 0.349044 | 0.103551 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0047150 | SBH | 0.0 | 0.0 | 0.979688 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0046560 | SBH | 0.054264 | 0.018122 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0046080 | SBH | 0.562109 | 0.0 | 0.956351 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0685500 | RBH | 2.360377 | 0.0776345 | 38.7604465 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0045590 | SBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0688000 | RBH | 1.7134105 | 0 | 0.006281 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0046190 | RBH | 0.112079 | 0.026021 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0046020 | SBH | 0.0 | 1.721392 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046340 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046310 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0046100 | RBH | 0.0 | 0.441897 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G046360 | RBH | 0.0 | 0.975249 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0046180 | RBH | 0.230032 | 0.732034 | 0.000000 |
