Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os05g31740 | OGI:05049900 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr05:18487281-18489223 | ||||||||
| Gene Symbol | CYP94E3, OsCYP94E3 | ||||||||||
| DNA seq | TTTGGATGGAATTATAAAAAGCATTAATTCCTCCCGTATGAATTCGCCAATCTGAATTTCCGGGAAAATTGAGAAACCATGGAGACCGCGCATCTAGCCTACGTGCTCCTCTTCCTCGTCACCGCCGTCCTCCTCTTCCATCTCCGGCGAGGCGGCCGGTCAGCTCCGGCGAAGCTCACGACGGCGCACCGCCCGCACCCGAACCCCGTCCTGGGCAACACCGTCGAGTTCATCCGCAACCGGCGCCGCTTCTTCGACTGGTACACCGACCTGCTGCGCGCGTCGCCGTCGGGCGCCATCGAGGCGTGGGGCCCGTTCGGCGCCGGCCACGCGGTGACCACGGCGTGCCCGGCCGCCGTCGAACACCTCCTGCGCGGCAACTTCGGCAACTATGTCAGGGGGGCGAGCTTCCGCGCCGCGATGTCCGAGCTCATCGGCGACGGCCTCTTCGCCGCCGACGGGCGCCTCTGGAGCGTCCAGAGGAAAGTGGCGTCCTACGCCTTCTCCTCCCGCGCGCTCCGCCGCTTCTCCGACGACGTCCTCGCCGTGCACCTCCGCGGAGGGCTCCTCCCGTTCCTGGACGCCGCCGCGGCGTCCGGGGAGGCCGTCGACCTGCAGGACGCGCTCCGCCGGTTCGCCTTCGACAGCATCTGCCACGTCGCGTTCGGCGTCGAGAGCTCGACGCTGCTCGAGACGGCGAGGGAGGACTCCGGCCGCCACGAGGCCCTCTTCGCGGCGTTCGACGCCGCCGTCGAGATCTCCTTCCGGAGGGCGCTGGCGCCGTTCACCCTCGTGCGGAAGCTCACGGGCCTCGTCAACGTCGGCAGCTCGCGCCGGCTCCGCGAAGCCATCGGTGTCATCGACGACTACGCCATGTCCGTCGTCGAATCCAAGGAGGCGGCGTGTCGCGATCGCGATAGCGAGGACGTGGACCCGGACCTGCTGTCGCGGTTCATGGCGGCCATGGACGAGGAGGACGGCGGCGAGCTGGGCGCCATGTTCCCCACGCCGGAGGGGAAGCGCCGGCTCCTGCGCGACGTGGTCGTGAGCTTCGTGCTGGCCGGCAAGGACACGACGTCGTCCGCCCTGACGTGGCTCTTCTGGCTCCTCGCCGCGAACCCGCGGTGCGAGAGGCGCGTCCGCGACGAGGTGTCGCGGTCGCCCGACGGCGACGGCGGCGGCGACGCGAAGGGGATGCACACGCACTACCTCCACGCTGCGATCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCGTTCAACGGGAGGGTGGCGGTCGGCGACGACGTGCTCCCGGGCGGCGCGGCGGTGCGCGCCGGGTGGTTCGCCAACTACTCCGCGTACGCGATGGGGCGGATGGAGAGGCTGTGGGGCGAGGGCTGCCTCGAGTTCTCGCCGGAGCGATGGCTCCGCGACGGCGGCGAGTTCGTGGCCGTGGACGCGGCGCGGTACCCGGTGTTCCACGCCGGGCCGAGGGCGTGCCTCGGGAAGGAGATGGCGTACGTGCAGATGAAGACGGTGGCGGCAGCCGTGCTGCGGAGGTTCAGCGTCGAGGTGGCGGCGCCGGCTCCGGCCATGGAATCGCCGCCGGCGTACGAGATGACGGCGACGATGAAGATGAAGGGCGGGCTGTGGGTGCGGCTAAGGAAGCGGGAATAGTCAGTGTGAGTGATTTGATGCCACTTGTTGTTCTTGTTTGACTAAGTGAACTCTTGCATCAGGTGTTGACGGGAAACCGTTTTAAACACTCGTTGGACATTCACCCGTTTCTTACATGTCATCTAAATAATTATGGAAAATTTTTAAAAAAATTGACATGATAGGTTAATATGTAATATATTACTTCACAAATATACAAGTTCAAATTCGTCTTCTATGAATTGTAACAAAAATAACAATTTTGACTGTGAATATACGTATACTAATTAGAGTTTAATTTCTTA
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| CDS seq | ATGGAGACCGCGCATCTAGCCTACGTGCTCCTCTTCCTCGTCACCGCCGTCCTCCTCTTCCATCTCCGGCGAGGCGGCCGGTCAGCTCCGGCGAAGCTCACGACGGCGCACCGCCCGCACCCGAACCCCGTCCTGGGCAACACCGTCGAGTTCATCCGCAACCGGCGCCGCTTCTTCGACTGGTACACCGACCTGCTGCGCGCGTCGCCGTCGGGCGCCATCGAGGCGTGGGGCCCGTTCGGCGCCGGCCACGCGGTGACCACGGCGTGCCCGGCCGCCGTCGAACACCTCCTGCGCGGCAACTTCGGCAACTATGTCAGGGGGGCGAGCTTCCGCGCCGCGATGTCCGAGCTCATCGGCGACGGCCTCTTCGCCGCCGACGGGCGCCTCTGGAGCGTCCAGAGGAAAGTGGCGTCCTACGCCTTCTCCTCCCGCGCGCTCCGCCGCTTCTCCGACGACGTCCTCGCCGTGCACCTCCGCGGAGGGCTCCTCCCGTTCCTGGACGCCGCCGCGGCGTCCGGGGAGGCCGTCGACCTGCAGGACGCGCTCCGCCGGTTCGCCTTCGACAGCATCTGCCACGTCGCGTTCGGCGTCGAGAGCTCGACGCTGCTCGAGACGGCGAGGGAGGACTCCGGCCGCCACGAGGCCCTCTTCGCGGCGTTCGACGCCGCCGTCGAGATCTCCTTCCGGAGGGCGCTGGCGCCGTTCACCCTCGTGCGGAAGCTCACGGGCCTCGTCAACGTCGGCAGCTCGCGCCGGCTCCGCGAAGCCATCGGTGTCATCGACGACTACGCCATGTCCGTCGTCGAATCCAAGGAGGCGGCGTGTCGCGATCGCGATAGCGAGGACGTGGACCCGGACCTGCTGTCGCGGTTCATGGCGGCCATGGACGAGGAGGACGGCGGCGAGCTGGGCGCCATGTTCCCCACGCCGGAGGGGAAGCGCCGGCTCCTGCGCGACGTGGTCGTGAGCTTCGTGCTGGCCGGCAAGGACACGACGTCGTCCGCCCTGACGTGGCTCTTCTGGCTCCTCGCCGCGAACCCGCGGTGCGAGAGGCGCGTCCGCGACGAGGTGTCGCGGTCGCCCGACGGCGACGGCGGCGGCGACGCGAAGGGGATGCACACGCACTACCTCCACGCTGCGATCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCGTTCAACGGGAGGGTGGCGGTCGGCGACGACGTGCTCCCGGGCGGCGCGGCGGTGCGCGCCGGGTGGTTCGCCAACTACTCCGCGTACGCGATGGGGCGGATGGAGAGGCTGTGGGGCGAGGGCTGCCTCGAGTTCTCGCCGGAGCGATGGCTCCGCGACGGCGGCGAGTTCGTGGCCGTGGACGCGGCGCGGTACCCGGTGTTCCACGCCGGGCCGAGGGCGTGCCTCGGGAAGGAGATGGCGTACGTGCAGATGAAGACGGTGGCGGCAGCCGTGCTGCGGAGGTTCAGCGTCGAGGTGGCGGCGCCGGCTCCGGCCATGGAATCGCCGCCGGCGTACGAGATGACGGCGACGATGAAGATGAAGGGCGGGCTGTGGGTGCGGCTAAGGAAGCGGGAATAG
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| Protein seq | METAHLAYVLLFLVTAVLLFHLRRGGRSAPAKLTTAHRPHPNPVLGNTVEFIRNRRRFFDWYTDLLRASPSGAIEAWGPFGAGHAVTTACPAAVEHLLRGNFGNYVRGASFRAAMSELIGDGLFAADGRLWSVQRKVASYAFSSRALRRFSDDVLAVHLRGGLLPFLDAAAASGEAVDLQDALRRFAFDSICHVAFGVESSTLLETAREDSGRHEALFAAFDAAVEISFRRALAPFTLVRKLTGLVNVGSSRRLREAIGVIDDYAMSVVESKEAACRDRDSEDVDPDLLSRFMAAMDEEDGGELGAMFPTPEGKRRLLRDVVVSFVLAGKDTTSSALTWLFWLLAANPRCERRVRDEVSRSPDGDGGGDAKGMHTHYLHAAITEAMRLYPPVPFNGRVAVGDDVLPGGAAVRAGWFANYSAYAMGRMERLWGEGCLEFSPERWLRDGGEFVAVDAARYPVFHAGPRACLGKEMAYVQMKTVAAAVLRRFSVEVAAPAPAMESPPAYEMTATMKMKGGLWVRLRKRE |
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| Function | Cytochrome P450 94A1 [UniProtKB/Swiss-Prot:O81117] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os05g31740 | LOC_Os05g31740.1 | Chr05 | 18487281 | 18489223 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGACCGCGCATCTAGCCTACGTGCTCCTCTTCCTCGTCACCGCCGTCCTCCTCTTCCATCTCCGGCGAGGCGGCCGGTCAGCTCCGGCGAAGCTCACGACGGCGCACCGCCCGCACCCGAACCCCGTCCTGGGCAACACCGTCGAGTTCATCCGCAACCGGCGCCGCTTCTTCGACTGGTACACCGACCTGCTGCGCGCGTCGCCGTCGGGCGCCATCGAGGCGTGGGGCCCGTTCGGCGCCGGCCACGCGGTGACCACGGCGTGCCCGGCCGCCGTCGAACACCTCCTGCGCGGCAACTTCGGCAACTATGTCAGGGGGGCGAGCTTCCGCGCCGCGATGTCCGAGCTCATCGGCGACGGCCTCTTCGCCGCCGACGGGCGCCTCTGGAGCGTCCAGAGGAAAGTGGCGTCCTACGCCTTCTCCTCCCGCGCGCTCCGCCGCTTCTCCGACGACGTCCTCGCCGTGCACCTCCGCGGAGGGCTCCTCCCGTTCCTGGACGCCGCCGCGGCGTCCGGGGAGGCCGTCGACCTGCAGGACGCGCTCCGCCGGTTCGCCTTCGACAGCATCTGCCACGTCGCGTTCGGCGTCGAGAGCTCGACGCTGCTCGAGACGGCGAGGGAGGACTCCGGCCGCCACGAGGCCCTCTTCGCGGCGTTCGACGCCGCCGTCGAGATCTCCTTCCGGAGGGCGCTGGCGCCGTTCACCCTCGTGCGGAAGCTCACGGGCCTCGTCAACGTCGGCAGCTCGCGCCGGCTCCGCGAAGCCATCGGTGTCATCGACGACTACGCCATGTCCGTCGTCGAATCCAAGGAGGCGGCGTGTCGCGATCGCGATAGCGAGGACGTGGACCCGGACCTGCTGTCGCGGTTCATGGCGGCCATGGACGAGGAGGACGGCGGCGAGCTGGGCGCCATGTTCCCCACGCCGGAGGGGAAGCGCCGGCTCCTGCGCGACGTGGTCGTGAGCTTCGTGCTGGCCGGCAAGGACACGACGTCGTCCGCCCTGACGTGGCTCTTCTGGCTCCTCGCCGCGAACCCGCGGTGCGAGAGGCGCGTCCGCGACGAGGTGTCGCGGTCGCCCGACGGCGACGGCGGCGGCGACGCGAAGGGGATGCACACGCACTACCTCCACGCTGCGATCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCGTTCAACGGGAGGGTGGCGGTCGGCGACGACGTGCTCCCGGGCGGCGCGGCGGTGCGCGCCGGGTGGTTCGCCAACTACTCCGCGTACGCGATGGGGCGGATGGAGAGGCTGTGGGGCGAGGGCTGCCTCGAGTTCTCGCCGGAGCGATGGCTCCGCGACGGCGGCGAGTTCGTGGCCGTGGACGCGGCGCGGTACCCGGTGTTCCACGCCGGGCCGAGGGCGTGCCTCGGGAAGGAGATGGCGTACGTGCAGATGAAGACGGTGGCGGCAGCCGTGCTGCGGAGGTTCAGCGTCGAGGTGGCGGCGCCGGCTCCGGCCATGGAATCGCCGCCGGCGTACGAGATGACGGCGACGATGAAGATGAAGGGCGGGCTGTGGGTGCGGCTAAGGAAGCGGGAATAG
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| Protein seq | METAHLAYVLLFLVTAVLLFHLRRGGRSAPAKLTTAHRPHPNPVLGNTVEFIRNRRRFFDWYTDLLRASPSGAIEAWGPFGAGHAVTTACPAAVEHLLRGNFGNYVRGASFRAAMSELIGDGLFAADGRLWSVQRKVASYAFSSRALRRFSDDVLAVHLRGGLLPFLDAAAASGEAVDLQDALRRFAFDSICHVAFGVESSTLLETAREDSGRHEALFAAFDAAVEISFRRALAPFTLVRKLTGLVNVGSSRRLREAIGVIDDYAMSVVESKEAACRDRDSEDVDPDLLSRFMAAMDEEDGGELGAMFPTPEGKRRLLRDVVVSFVLAGKDTTSSALTWLFWLLAANPRCERRVRDEVSRSPDGDGGGDAKGMHTHYLHAAITEAMRLYPPVPFNGRVAVGDDVLPGGAAVRAGWFANYSAYAMGRMERLWGEGCLEFSPERWLRDGGEFVAVDAARYPVFHAGPRACLGKEMAYVQMKTVAAAVLRRFSVEVAAPAPAMESPPAYEMTATMKMKGGLWVRLRKRE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.328637 | 0.173339 | 0.004974 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0382500 | RBH | 0.386915 | 0.264528 | 0.017743 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72260 | RBH | 0.361275 | 1.196666 | 0.084030 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0382500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0015270 | RBH | 0.024691 | 0.0 | 0.635333 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0015270 | RBH | 0.038788 | 0.0 | 0.553094 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0015110 | RBH | 0.959156 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0015140 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0015300 | RBH | 0.316075 | 2.009256 | 0.449940 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0282500 | RBH | 0.0758215 | 1.036469 | 0.0890675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0014870 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0293600 | RBH | 0.411052 | 2.401788 | 0.006279 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0015080 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0015110 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0015120 | RBH | 0.0 | 3.812948 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0015200 | RBH | 0.0 | 0.075499 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0015240 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G014770 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0015040 | RBH | 0.0 | 0.0 | 0.0 |
