Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g54570 | OGI:01094760 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:31391261-31392235 | ||||||||
| Gene Symbol | OsOFP22, OsOFP05 | ||||||||||
| DNA seq | ATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGGCGCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCTGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCGTCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGA
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| CDS seq | ATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGGCGCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCTGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCGTCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGA
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| Protein seq | MKWGLRSSRHNQREKQQRTQEEEHKHEQQEDKGNKSRAAFLSFSPLAWLSKLTAKNNAAAAKPKPAAPADKSAVAATGGFPSCFFKGASSSTSTSVSLSSSAASQSSLADSSPADHQAPRRLSVGNDGDTAEAAAARQLYHRRRHYSVGGDRDLQTLRNLIPFSRAASPIPVPAPFVPALKTTPPLLPSDTDEEKRPRSRRRRRRSGGGGRRSFSGRTPGARVAATVRVRSPRRVASAAAAAVSELERFAVVRRTSDPQREFRASMVEMIASKRIGRPEELETLLACYLSLNADEHHDCIVKVFRQVWFELNPARVAAVAPPRS |
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| Function | Transcription repressor OFP2 [UniProtKB/Swiss-Prot:O04351] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g54570 | LOC_Os01g54570.1 | Chr01 | 31391261 | 31392235 | + | MSU_osa1r7 | ||
| CDS seq | ATGAAGTGGGGGCTTAGAAGTAGTAGACACAACCAGAGAGAGAAGCAGCAGCGCACACAAGAGGAAGAGCACAAGCACGAGCAGCAAGAGGACAAGGGCAACAAGAGCAGGGCGGCCTTCCTGTCCTTCTCGCCGCTCGCGTGGCTCTCGAAGCTCACGGCCAAGAACAATGCTGCTGCCGCTAAACCGAAGCCTGCCGCGCCGGCCGACAAGAGCGCCGTCGCCGCCACTGGCGGATTCCCTTCTTGCTTCTTCAAGGGCGCGAGCTCGAGCACGAGCACGAGCGTGAGCTTGAGCTCGAGCGCGGCGTCGCAGAGCAGCCTGGCGGATTCCTCGCCCGCTGACCACCAGGCGCCGCGCCGCCTCTCGGTTGGCAACGACGGCGACACCGCCGAGGCTGCGGCCGCGCGGCAGCTGTACCACCGCCGCCGCCATTACTCGGTCGGCGGCGACCGGGACCTCCAAACCCTCCGCAACCTCATCCCGTTCTCCCGGGCCGCTTCTCCGATCCCGGTGCCTGCTCCGTTCGTCCCGGCGCTGAAGACGACGCCGCCGCTGCTGCCGTCCGACACGGACGAGGAGAAGCGGCCGCGGAGCCGCCGGCGCCGGCGCCGCAGCGGCGGCGGCGGGCGGCGGTCGTTCTCCGGGAGGACCCCGGGCGCGCGGGTGGCTGCCACCGTGCGCGTGCGGTCCCCGCGTCGCGTGGCGTCGGCGGCGGCGGCGGCGGTGTCGGAGCTGGAGCGGTTCGCGGTGGTGCGCCGGACGAGCGACCCGCAGCGGGAGTTCCGCGCGTCGATGGTGGAGATGATCGCGAGCAAGCGCATCGGCCGGCCGGAAGAGCTGGAGACGCTCCTGGCGTGCTACCTCTCGCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTGTTCCGGCAGGTCTGGTTCGAGCTCAACCCCGCCCGCGTCGCCGCCGTTGCGCCGCCGCGCAGCTGA
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| Protein seq | MKWGLRSSRHNQREKQQRTQEEEHKHEQQEDKGNKSRAAFLSFSPLAWLSKLTAKNNAAAAKPKPAAPADKSAVAATGGFPSCFFKGASSSTSTSVSLSSSAASQSSLADSSPADHQAPRRLSVGNDGDTAEAAAARQLYHRRRHYSVGGDRDLQTLRNLIPFSRAASPIPVPAPFVPALKTTPPLLPSDTDEEKRPRSRRRRRRSGGGGRRSFSGRTPGARVAATVRVRSPRRVASAAAAAVSELERFAVVRRTSDPQREFRASMVEMIASKRIGRPEELETLLACYLSLNADEHHDCIVKVFRQVWFELNPARVAAVAPPRS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.073034 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0625900 | SBH | 0.0 | 0.179096 | 0.426836 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g44090 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0625900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0033640 | RBH | 0.0 | 0.0 | 1.783406 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0033160 | RBH | 0.0 | 1.070111 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0033600 | RBH | 0.0 | 1.680896 | 0.530667 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0032860 | RBH | 0.0 | 0.009015 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0032630 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0521000 | RBH | 0.3304105 | 1.756735 | 0.731131 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0032340 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0515700 | RBH | 0.457235 | 1.054941 | 6.0332245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0032520 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0032580 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0032820 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0032930 | RBH | 0.0 | 0.334886 | 0.050962 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0032710 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G033190 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0032790 | RBH | 0.0 | 3.530834 | 0.797044 |
