Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os01g49950 OGI:01086830 | 3/16 Nipponbare | IRGSP 1.0 | MSU Chr01:28699896-28710027
Gene Symbol -
DNA seq

ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCTATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTGTCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGATGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCTATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGTGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGATATGTTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAAGATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACGTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGATAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATATTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACTAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCCTTGTGCACACGCGACCAGGCTTACTGACTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTGAGTTCGGATTGTTCATTTCTAAATTTTTATGATAATTACTTCATCGAGCCATATAATTTACCTCTCTTCACAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGTTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGCGGTACATCCAATTTGTATTACTTCTTACAATTATTTCATTTATCTTGCATAATATAGGACAACTACTGAATTTGTTATTTCCATCTTGCATAGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTATTTCGCACGGTACTGCTCAGCCCAGAGGTTTCTTAAGTTTTGTTTCTGTTTTTGTACGAAAACATCACCCCGTCGTAACTTGATGATCCATCCTCGCAGGACCTCGTTTGCCTTCGAGCGCCCCTAGCTTCGGATCAGTGCGACCTACAGCACCGGTTTCGCACGGTACAGTTCAGCCCAGATATTAGTTCATTTTTGTTTCAGCTTTTGCACGATTATGTCACCATGTTTTAACTGCACGTTTCCTCATCGCAGGACCTCGTCTGCCTTCGAGCGCGTTCGCAGGCACGACCGGCGCTTCCACGAGATCCGCAGGGGCGTTCGCCACCTCTTCGGGCGCGTTCGCCAGCTCTTCCTCTCACGGAGCGTCGATCCCTCGCCCACACGGTACTTTACTTTTTATTAATACTGTTAAATACCTGTACGAAACTGATGGTCCTTGTCCAGCAGAATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCAGACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCACGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGGTAAGAGGCCTCGTCAGTAGTGTTCTACCTCTTCAGTCCTTATGTGACCGTTTCTTTTGGCTTACAAACTTGTAAAGCAGTACTACTTTTGCTATTACTACTGCAGTACTACTTGTGTTTGTCTCGTCTACATAGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTGCACGGTAGTGTCAGATCCAGTAGCGCGCACAGTCCACAACAGCACACATGAAAAGCGGCAGCTCGAGTTATCACTATCAACTTTCGGCGCTGCCTGTTTACATAAAATGAATCACGCCCACGCGTGATCGTCTTGTCACATCTAATGAATAATGTATCTCATTGAGTTCACATATATTGCAGTGAAAACGACGCTATATAATTGACAATCTGAAGGCAACCTCTTCATATCTTCTTTCCCACTAGCACACAACACACGAAAATGGAAGCCTATTCATTGGTAATACGTAATCTAGATTTGAGATTATGTAGAACATTCTTCACTACAATTTTACATTTTGGCAGCAAACCAAACATGATCAAATGCAATTTTACCTTACCAAATATTTGGTCGTGAAGAAAAATTTGGCACTAACAATCCAAATATGCCCTAAAAATTAATAAAATATTTGTACGGTAACAAAATATTTGTACGGTAACAATCCAAATATGCCCTAAAAAATAATAAAATTGTATTTTACCAGTCTTGGAGATTTTAATCTTGTATAGTTTTAAATATAAAAAGATTTGATAACTATTGATATTTATACAAAAATATAGAGCACAGTACAAAATCGCCCTTGCGGAGGGCGGCAAGGGGGCCGCCTGCAAAATTCCATGCCCCCTCGCCGCCCATTTGCAGGCGGCCCCCCGCACAGTACAAAATCGCCCTCGCGGAGGGCGGCAAGGGGGTCGCCTGCAAAATTCCATGCCCCCTCGCCGCCCATTTGCAGGCGGCCCCCCGCACAGTACAAAATCGCCCTCGCGGAGGGCGGCAAGGGGGCCGCCTGCAAAATTCCATGCCCCCTCGCCGCCCATTTGCAGGCGGCCCCCCGCACAGTACAAAATCGCCCTCGCGGAGGGCGGCAAGGGGGCCGCCTGCAAATTTCGTTGACGGCCGTCGCCCGAGAGCGAACGGCCGTCTGCCACGTCATTTTCGCCGCCCTCTGGGAGGGCGATTTTTAAAAATCGCCTTCCCAGAGGGCGGTAGGCGACTACTTCCGTCAATTTTCAAAATGGAAAATTATTTTTGTAAAACTTTTAATAAAAAAATTAAAAATAAAAAAAATTCCACTCTGTTCAAGGGGAGCTTGCTACGTGGTTGGGCCAGTGGAGCGGAGGCCCATCTTGCCCGTTAAGCGATCAGTTAAGTGGAATTTTTTTATTTTTAATTTTATTTATTATTAAAATAATTACAAAAATAATTTTCTATTTAAAAAATTTACAAAACTAGTCACGCCATCGCCCTCGCCCTCCTAGAAGACGATTTTGCCGATATGGCAGACGGCCGTTGCCCTCCCATAACGGCCGGCCACAGGGGACACCGATTTTTTTTTGCAAGCAGTCCCCTTGGGACCGCCTGCAAAAGGGCGGTGAGGCGGCGTGGCATTTTTGCAGACATACTTAAGCCTTAGTCTCAAACTCTCAATGCTTCAATAGCATTTCTTATCTCTGTTGAATGTCAAAAAAAAAATCTTAACTTTGTGTTATAAAAAAAAACTACCTCTACTACTGTAAAAGTGGAGTCATCATACTTCTCCCACCACATAGAAAATTAAAAATAAAAAAACTGAAAGATAAAATTGAATCATATAAAAACCATTCGTCAGAAATCCTCCTAATGTAGCTATAAAGCGTGAGCATAGAACTATAACACCAAAATGCATCATTCCTGCAGGACTGCAGGTCCCCTCATAATACTGGAAACAAATCAAGGCTACTTCAGGGCGTTGACAGAAGGTTTGAGGGTTCTTTTGTCAGTTTTGTGCGAGAGCGGAAGAAGGTTTGGGTTTAGAGCATACCCCAAAACCGCCCGTACCTTTTAAAGGTTCAGTGCCTAAAATCGAAATCATTTGTAGGATAGTTGGATGTATTCATGTATATAGTATTCAACAATACATCATTCATGCTTTCGCACAAAAAAATCCTTCAACATGGCTAGATTTTTGGTTAAGGTCTAAAATGGTCTTGATAGCCATCGGATCAGGCAATCAAGATAAGATGAAAATGAAGATGAAGATTAAGTTTTTTACGCAAAACGAGGTGGTATTAACGTATGATTGATTGAGTTTTAATTAGTACAAACTTAAAAAATAGATTAATATGATATTTTAGAGCAACTTTCATATAAAAAGCTTTTGCACGAAACACACCATTTAGCGGTTTGAAAAATGTACCATAAAAATTTTAATCTTCATTCAATTCTTGTTAGAGAAAAGAACAGCACCAAACGTAACATCCAAACGCAGAAAGTACCAAGGAAGACCACAAGGATAGATGCGAAGGGGAACAACTATGAAAGTACAGAACATGGTGCTACAAGCCTCTTCAAGCTAGAGACTACTACTGCCTTGAAGCTTCAGGTTCAGTTGCTGTTGTCCACTGCTGCAAATTGCACTGCTTTGTTGGCAAGACAACAAAGAGTATCTAGTGTGTAAACTTGTTTCCCAACTTATGCACAAAATATTCATTGTCAACTTGATGACAGTATTCTAATTTGCTGGTGACTAGTGTGTGAATTATTATGGAGACTTGTTTCCTCTTTGGAGCAGAAAGTGAAAGAAAAACAAGTAGCAGAACTTCAGATAAAACACTATCCGGGAACTACTTTTGTTTTTCTGAAGGATCCAGAATAACAGATCGAGTTTCTGAACGATCAAAAAGAGAACTGTTATGTCAATCTAACAAAGTAGAGTGCGAAATCACCGGTGTTAAAAGGTGAAAATATTGGAAAATAACATGCTAGCCCTCCATACATGATTATATACATCGATCAAAGAATTGTTAACCCTAGATTCTGGAAGTGAAATCCAGAACAAAAAGAAGTTGTCCGTCCATATCCCGGAGGACCCGGACTACAACAAAAATGCGTGATGATCAGTATGATCACTGATCAGTCGCGGTTGCAGAGAAGCATGACAACGCATCGCCGGATGATGTACAGCCTCGCCTTGTGCTCCTTCAACATTCTGCCGAGGCCTCCTCTTCTCCCTTGGCTCCTTGGATTGCCCATACTGTTGGAGAAATCAGATCACACCTCTGAAGAAAAAAGACAGCCCTCCTTCACAAGTGTTTAGTGCTTAAGTGCTTCTGCTTAGCATGGTGATGCCTGTTGCATTTGGCGTGCTTATATAGAGGAGAAGCGCCCAAATCTCTAGCTCCTTTTCTTTAAAAGAAGCCTTCTATTGTCTAGCTGTAAACTACCAATAATATATCATACATTTTGATGTACTGGTAATATTTTTAGAGTGGGTAGCTGCAAGTACTCCACAGAGCACATGCCACGGTTTCTCAACTTGCACGAAGTGTGATGCAAGATCGATCTGGGGGACAACGCCTCTAAAAATTTTGTGGCCTATAATGCCTCATGAATCTTGCTCTGGGATTTGTTTAGCTATACGTATGGCTAACATTCCAACTTGTTTGACACTAACTTGGTTCTGTCTGGCCCTGGCCATACATATCTGAGTTTCTGTCCTCGGTTTTGCAAGATCCTGATGTGCTGAGATCGTCAGATTCCCCCAAATTAATGATCTGGAGGCTAACTTCTGGTCATCAATGATCTGCTGTGTTATTGATATGTCTGCAAAGATTGCAGACAAGTACATGATCGTAGATTGCATTTTGTTTCAAATCAGTCTATAGAGGTTTGTAACTTGCAAGCACCTCACCTAAAGGAATAACACAAACTAACGCAGGCGTCGGCAGTTTTGCGACCACATACTGTAGATGATGCATGTGTATCCCTACCTAATTCTTACCGGTTAATTAGTAGCAGCACCAATACTGTAGAGAGTAATAGCGGATTTTGGGTTCTTCTATTTGTTGGGCTAAATCATCGGACGTAATACGAACAATGACCACTGGTTGAATAGCAAGAGAAGATTGTAAATGTGTTACGGGTTGGCAATGAGGAGCTCATCAGCCATTAACAATTTATCTGGATTACATGTTTGCAAATTTATCTTTTGGGAGGGTTTTTAACACTCTCCCTTCAGCTTTGACAGCCTCTTGTCAAAGACTCAAAGTGCAAAACCTGTATAAAAACACTCTCTTTCTTAATGAAATTTGGCCGACCTACTCTTTGGCCGGCCCGGCATACATGTTTGCAAATTGCAACAATTAACAACAAGCTCTTGTTTGTACAGATTACAGACACGTACATGATATGGATTGCATTTCTTTAAAATCTATCTATAGAGGTTGCAACTTGCAAGCATTTCGCCTTTGTTTTCTGAAAGGGAATACGAACTAACCACACAGCCGTAGATATGCATGTGAAACCCTACCAAATTCTCGCCAGTCAGCACACTCTGGCAGTAGCGTCTCTCTCTATTTGCAGGACTAAATGGCACGTCACCTGAACACGAATCGCTGGTTGAATAATCAGACTGCAGAGAGGCTTGAGTGTGCTGTCAGTTGACTACTAGGAGTTCATAAGCCAGTTTAGTAGTAGTAACAGTTTTCTCACTTTTCTCTGGATTGCAACAACGGCAAGCGCTCTTCTTTGACCGGCTTTTAAAAGACACACAGAGCCGTGGTCACACAATTTGTTATGCCAACGTTAGCGTTTGTGCCCACCGAGGTTTTCAGTCAACTGGCTTGTGCGCCAATGTAGCGATTCTGTCCCGTAGACGAGTGATCGATGCGATGGTATAGGACGTACGTTAAACTTGAGGTGCCGGCCAAATCCCGTAGCCGTTTTAACTTCGTCCTGATGCGATGTATCCTGCATATGCATGTCCAAAATGGATGGATCGTGCTTAGCTCATGGGAGTAGCATCGATATATTGGCCCTGTTTGGATCTGGAGGGCTATTTAATAGCCTTTCAGAATCTTGCTATTTAAGAGTATTAAACGTAGATTATTGATAAAACCCATTCCATAACCCCTACGCTATTTTACGAGACGAATCTAACAAGGTATATTAATCCATGATTTGCTACAGTGATGCTACAGTAATCAGCCGCTAATCGTGGATTAATATACATCATTAGATTCGTCTCGCAAAATAGCCTAGGGGTTATGGAATCGGATTTATCGGTAATCTATGTTTAATACTTCTAAATAGCAAGATTCTGGAGGGCTATTTAATAGCTCGGAGCATCCAAACAAGACCATTGTATTATTGTGTGGCCAGTCAAAGAGTAACTTGGATAGGGCCGGTGGCTTGTTATATATATACTGGATTAGTTGCGCTCCTTAAATTTTCAGAACCATATGGAAGTGTACTCTCTCCGTCCAAGAAAAGACAAACTCTGGGTTTCCGTGTCCAACTTTGACTGTCCGTCTCATATGAAATTTTTTTATAATTCGTATTTTCGTTGTTGTTAGATGATAAAATATGATTAATATTTTATGCGATTAATATTTTATGCGTGACTTGTCTTTTTAATTTTTTTATATTTTTTAAAAATAAGACGGACGGTCAAACGTTGGGCACGAAAACCAGAGTTTGTTTTTTTTTGGGACGGAGGGAGTAGACGTGTATCATAGCAACCCTGACGAACTGATACTAACGTTCAGATCGATGGTTGATTGCACTGCACTGCAGATGAAAGAAAAAGATTCTTGCCGCTCGGTCAAGGCATGGAAGCAGACAGGACGTATTCGCAAACCTACAAAGAAAAGGTAATTAATGGCTCGCGATACGACGCATTGGTCAGCGATGACGAACAACAAGCGGGTTGACGGCTGTATCGGCATACCCGGCATCGGATGGCCGATGGCGGATGGCAACATTAGCTGCAGGATCCGATCGTGTATCCTGGACTGTTTCTAACCTCCCTGAACAAAACGAACGGACGTTAATAATCAAGCACCAGGCGGTTTGACTTTAAATGCCGGATGGACGAGCCGACGTATCGATGATCCATCTGGTTGCTGGATCGGGCCAGGAAAGTTTGCAGGTTGGTGCATGCGTTTGCACGGAACTCACCATGAGCTACCCACGGTCAAGGCGTCGTACGTACGCATTGCACGTACGTACAGCTCGATAGCTGCACTGGAACTGCACCTAGCTAGCGCCTAGCGCGACCTACATTGAACCTTCCAGCGTCCGTCCAAGTGTACGTACGATCAGAGCTAGCGCGCGCCGCGCGGTATATAAACACATCAACAAGCAGCCCCGACTCCATCGCGCACCCACACCGTCGTCAAAGTGTTTTTTTGGCATGCCAGCGCCCGGTTAATTAGCTGGCTCTCGCGCGCGGACGCATTTGCTAGTAGTTGCTAGCTAGCTCACTCGCTCTCGCGGCAGAGAGAGCCAGCGACGAAGGAGCGCGCGCCGCGCGGAGACCATGGAGCTCGTCGTCGCCAGGAGCCACGGGGCGAAGAAGCGCAGGGGCGCCAGCCAGCTCGGTGGCGGCTGCAGGGTCGCGCGGGGGAACGAGGCGAGGCTCCGCATCATCTTCCGCTGCGTCGCGCTGCTCGTGTGCTACCGCGACTGA

More
CDS seq

ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCTATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTGTCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGATGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCTATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGTGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGATATGTTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAAGATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACGTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGATAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATATTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACTAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGTTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGCGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTATTTCGCACGCAGAATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCAGACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCACGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTGCACGGACTGCAGGTCCCCTCATAATACTGGAAACAAATCAAGGCTACTTCAGGGCGTTGACAGAAGAGAAAAGAACAGCACCAAACGTAACATCCAAACGCAGAAAGTACCAAGGAAGACCACAAGGATAGATGCGAAGGGGAACAACTATGAAAGTACAGAACATGGTGCTACAAGCCTCTTCAAGCTAGAGACTACTACTGCCTTGAAGCTTCAGATGAAAGAAAAAGATTCTTGCCGCTCGGTCAAGGCATGGAAGCAGACAGGACGTATTCGCAAACCTACAAAGAAAAGAGAGAGCCAGCGACGAAGGAGCGCGCGCCGCGCGGAGACCATGGAGCTCGTCGTCGCCAGGAGCCACGGGGCGAAGAAGCGCAGGGGCGCCAGCCAGCTCGGTGGCGGCTGCAGGGTCGCGCGGGGGAACGAGGCGAGGCTCCGCATCATCTTCCGCTGCGTCGCGCTGCTCGTGTGCTACCGCGACTGA

More
Protein seq

MSSKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIYRPAERTFQSIYSWLLRGFRIDQEVYTMSVSVVVSRATEGYFWELMPMDSTDAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEVDDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYVHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGKIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILIAIGCDGNNQVLPMAFAFVESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDIRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPLVEGDEPPIPLGALHDDPPTMRRRLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVAADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPVQPRPRAPTVGAGPRPTAPISHAEFAAGIFGTGASSSHAGRTGPTSQFYDDDLHGADHHDVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSHGHIRAQGRRDRVLFIHMVLEQLMLTTTHFRRCTDCRSPHNTGNKSRLLQGVDRREKNSTKRNIQTQKVPRKTTRIDAKGNNYESTEHGATSLFKLETTTALKLQMKEKDSCRSVKAWKQTGRIRKPTKKRESQRRRSARRAETMELVVARSHGAKKRRGASQLGGGCRVARGNEARLRIIFRCVALLVCYRD

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os01g49950 LOC_Os01g49950.1 Chr01 28699896 28710027 + MSU_osa1r7
CDS seq

ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCTATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTGTCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGATGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCTATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGTGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGATATGTTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAAGATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACGTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGATAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATATTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACTAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGTTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGCGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTATTTCGCACGCAGAATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCAGACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCACGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTGCACGGACTGCAGGTCCCCTCATAATACTGGAAACAAATCAAGGCTACTTCAGGGCGTTGACAGAAGAGAAAAGAACAGCACCAAACGTAACATCCAAACGCAGAAAGTACCAAGGAAGACCACAAGGATAGATGCGAAGGGGAACAACTATGAAAGTACAGAACATGGTGCTACAAGCCTCTTCAAGCTAGAGACTACTACTGCCTTGAAGCTTCAGATGAAAGAAAAAGATTCTTGCCGCTCGGTCAAGGCATGGAAGCAGACAGGACGTATTCGCAAACCTACAAAGAAAAGAGAGAGCCAGCGACGAAGGAGCGCGCGCCGCGCGGAGACCATGGAGCTCGTCGTCGCCAGGAGCCACGGGGCGAAGAAGCGCAGGGGCGCCAGCCAGCTCGGTGGCGGCTGCAGGGTCGCGCGGGGGAACGAGGCGAGGCTCCGCATCATCTTCCGCTGCGTCGCGCTGCTCGTGTGCTACCGCGACTGA

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Protein seq

MSSKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIYRPAERTFQSIYSWLLRGFRIDQEVYTMSVSVVVSRATEGYFWELMPMDSTDAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEVDDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYVHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGKIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILIAIGCDGNNQVLPMAFAFVESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDIRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPLVEGDEPPIPLGALHDDPPTMRRRLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVAADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPVQPRPRAPTVGAGPRPTAPISHAEFAAGIFGTGASSSHAGRTGPTSQFYDDDLHGADHHDVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSHGHIRAQGRRDRVLFIHMVLEQLMLTTTHFRRCTDCRSPHNTGNKSRLLQGVDRREKNSTKRNIQTQKVPRKTTRIDAKGNNYESTEHGATSLFKLETTTALKLQMKEKDSCRSVKAWKQTGRIRKPTKKRESQRRRSARRAETMELVVARSHGAKKRRGASQLGGGCRVARGNEARLRIIFRCVALLVCYRD

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0595300 SBH 0.916307 0.456079 1.496882
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g47710 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os01g0595300 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0023470 SBH 0.115423 0.000000 0.938548
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0023790 SBH 0.267439 0.0 0.483934
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0023200 SBH 0.000000 0.064466 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0022900 SBH 0.000000 13.148704 3.219382
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0539000 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0467300 RBH 0.508023 0.2292105 0.1501465
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0022860 SBH 0.000000 0.056177 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0022810 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0023060 SBH 0.529715 0.227037 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G023190 SBH 0.0 1.635728 1.304630
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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