Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
LOC_Os01g49950 | OGI:01086830 | 3/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:28699896-28710027 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCTATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTGTCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGATGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCTATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGTGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGATATGTTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAAGATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACGTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGATAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATATTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACTAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCCTTGTGCACACGCGACCAGGCTTACTGACTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTGAGTTCGGATTGTTCATTTCTAAATTTTTATGATAATTACTTCATCGAGCCATATAATTTACCTCTCTTCACAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGTTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGCGGTACATCCAATTTGTATTACTTCTTACAATTATTTCATTTATCTTGCATAATATAGGACAACTACTGAATTTGTTATTTCCATCTTGCATAGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTATTTCGCACGGTACTGCTCAGCCCAGAGGTTTCTTAAGTTTTGTTTCTGTTTTTGTACGAAAACATCACCCCGTCGTAACTTGATGATCCATCCTCGCAGGACCTCGTTTGCCTTCGAGCGCCCCTAGCTTCGGATCAGTGCGACCTACAGCACCGGTTTCGCACGGTACAGTTCAGCCCAGATATTAGTTCATTTTTGTTTCAGCTTTTGCACGATTATGTCACCATGTTTTAACTGCACGTTTCCTCATCGCAGGACCTCGTCTGCCTTCGAGCGCGTTCGCAGGCACGACCGGCGCTTCCACGAGATCCGCAGGGGCGTTCGCCACCTCTTCGGGCGCGTTCGCCAGCTCTTCCTCTCACGGAGCGTCGATCCCTCGCCCACACGGTACTTTACTTTTTATTAATACTGTTAAATACCTGTACGAAACTGATGGTCCTTGTCCAGCAGAATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCAGACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCACGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGGTAAGAGGCCTCGTCAGTAGTGTTCTACCTCTTCAGTCCTTATGTGACCGTTTCTTTTGGCTTACAAACTTGTAAAGCAGTACTACTTTTGCTATTACTACTGCAGTACTACTTGTGTTTGTCTCGTCTACATAGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTGCACGGTAGTGTCAGATCCAGTAGCGCGCACAGTCCACAACAGCACACATGAAAAGCGGCAGCTCGAGTTATCACTATCAACTTTCGGCGCTGCCTGTTTACATAAAATGAATCACGCCCACGCGTGATCGTCTTGTCACATCTAATGAATAATGTATCTCATTGAGTTCACATATATTGCAGTGAAAACGACGCTATATAATTGACAATCTGAAGGCAACCTCTTCATATCTTCTTTCCCACTAGCACACAACACACGAAAATGGAAGCCTATTCATTGGTAATACGTAATCTAGATTTGAGATTATGTAGAACATTCTTCACTACAATTTTACATTTTGGCAGCAAACCAAACATGATCAAATGCAATTTTACCTTACCAAATATTTGGTCGTGAAGAAAAATTTGGCACTAACAATCCAAATATGCCCTAAAAATTAATAAAATATTTGTACGGTAACAAAATATTTGTACGGTAACAATCCAAATATGCCCTAAAAAATAATAAAATTGTATTTTACCAGTCTTGGAGATTTTAATCTTGTATAGTTTTAAATATAAAAAGATTTGATAACTATTGATATTTATACAAAAATATAGAGCACAGTACAAAATCGCCCTTGCGGAGGGCGGCAAGGGGGCCGCCTGCAAAATTCCATGCCCCCTCGCCGCCCATTTGCAGGCGGCCCCCCGCACAGTACAAAATCGCCCTCGCGGAGGGCGGCAAGGGGGTCGCCTGCAAAATTCCATGCCCCCTCGCCGCCCATTTGCAGGCGGCCCCCCGCACAGTACAAAATCGCCCTCGCGGAGGGCGGCAAGGGGGCCGCCTGCAAAATTCCATGCCCCCTCGCCGCCCATTTGCAGGCGGCCCCCCGCACAGTACAAAATCGCCCTCGCGGAGGGCGGCAAGGGGGCCGCCTGCAAATTTCGTTGACGGCCGTCGCCCGAGAGCGAACGGCCGTCTGCCACGTCATTTTCGCCGCCCTCTGGGAGGGCGATTTTTAAAAATCGCCTTCCCAGAGGGCGGTAGGCGACTACTTCCGTCAATTTTCAAAATGGAAAATTATTTTTGTAAAACTTTTAATAAAAAAATTAAAAATAAAAAAAATTCCACTCTGTTCAAGGGGAGCTTGCTACGTGGTTGGGCCAGTGGAGCGGAGGCCCATCTTGCCCGTTAAGCGATCAGTTAAGTGGAATTTTTTTATTTTTAATTTTATTTATTATTAAAATAATTACAAAAATAATTTTCTATTTAAAAAATTTACAAAACTAGTCACGCCATCGCCCTCGCCCTCCTAGAAGACGATTTTGCCGATATGGCAGACGGCCGTTGCCCTCCCATAACGGCCGGCCACAGGGGACACCGATTTTTTTTTGCAAGCAGTCCCCTTGGGACCGCCTGCAAAAGGGCGGTGAGGCGGCGTGGCATTTTTGCAGACATACTTAAGCCTTAGTCTCAAACTCTCAATGCTTCAATAGCATTTCTTATCTCTGTTGAATGTCAAAAAAAAAATCTTAACTTTGTGTTATAAAAAAAAACTACCTCTACTACTGTAAAAGTGGAGTCATCATACTTCTCCCACCACATAGAAAATTAAAAATAAAAAAACTGAAAGATAAAATTGAATCATATAAAAACCATTCGTCAGAAATCCTCCTAATGTAGCTATAAAGCGTGAGCATAGAACTATAACACCAAAATGCATCATTCCTGCAGGACTGCAGGTCCCCTCATAATACTGGAAACAAATCAAGGCTACTTCAGGGCGTTGACAGAAGGTTTGAGGGTTCTTTTGTCAGTTTTGTGCGAGAGCGGAAGAAGGTTTGGGTTTAGAGCATACCCCAAAACCGCCCGTACCTTTTAAAGGTTCAGTGCCTAAAATCGAAATCATTTGTAGGATAGTTGGATGTATTCATGTATATAGTATTCAACAATACATCATTCATGCTTTCGCACAAAAAAATCCTTCAACATGGCTAGATTTTTGGTTAAGGTCTAAAATGGTCTTGATAGCCATCGGATCAGGCAATCAAGATAAGATGAAAATGAAGATGAAGATTAAGTTTTTTACGCAAAACGAGGTGGTATTAACGTATGATTGATTGAGTTTTAATTAGTACAAACTTAAAAAATAGATTAATATGATATTTTAGAGCAACTTTCATATAAAAAGCTTTTGCACGAAACACACCATTTAGCGGTTTGAAAAATGTACCATAAAAATTTTAATCTTCATTCAATTCTTGTTAGAGAAAAGAACAGCACCAAACGTAACATCCAAACGCAGAAAGTACCAAGGAAGACCACAAGGATAGATGCGAAGGGGAACAACTATGAAAGTACAGAACATGGTGCTACAAGCCTCTTCAAGCTAGAGACTACTACTGCCTTGAAGCTTCAGGTTCAGTTGCTGTTGTCCACTGCTGCAAATTGCACTGCTTTGTTGGCAAGACAACAAAGAGTATCTAGTGTGTAAACTTGTTTCCCAACTTATGCACAAAATATTCATTGTCAACTTGATGACAGTATTCTAATTTGCTGGTGACTAGTGTGTGAATTATTATGGAGACTTGTTTCCTCTTTGGAGCAGAAAGTGAAAGAAAAACAAGTAGCAGAACTTCAGATAAAACACTATCCGGGAACTACTTTTGTTTTTCTGAAGGATCCAGAATAACAGATCGAGTTTCTGAACGATCAAAAAGAGAACTGTTATGTCAATCTAACAAAGTAGAGTGCGAAATCACCGGTGTTAAAAGGTGAAAATATTGGAAAATAACATGCTAGCCCTCCATACATGATTATATACATCGATCAAAGAATTGTTAACCCTAGATTCTGGAAGTGAAATCCAGAACAAAAAGAAGTTGTCCGTCCATATCCCGGAGGACCCGGACTACAACAAAAATGCGTGATGATCAGTATGATCACTGATCAGTCGCGGTTGCAGAGAAGCATGACAACGCATCGCCGGATGATGTACAGCCTCGCCTTGTGCTCCTTCAACATTCTGCCGAGGCCTCCTCTTCTCCCTTGGCTCCTTGGATTGCCCATACTGTTGGAGAAATCAGATCACACCTCTGAAGAAAAAAGACAGCCCTCCTTCACAAGTGTTTAGTGCTTAAGTGCTTCTGCTTAGCATGGTGATGCCTGTTGCATTTGGCGTGCTTATATAGAGGAGAAGCGCCCAAATCTCTAGCTCCTTTTCTTTAAAAGAAGCCTTCTATTGTCTAGCTGTAAACTACCAATAATATATCATACATTTTGATGTACTGGTAATATTTTTAGAGTGGGTAGCTGCAAGTACTCCACAGAGCACATGCCACGGTTTCTCAACTTGCACGAAGTGTGATGCAAGATCGATCTGGGGGACAACGCCTCTAAAAATTTTGTGGCCTATAATGCCTCATGAATCTTGCTCTGGGATTTGTTTAGCTATACGTATGGCTAACATTCCAACTTGTTTGACACTAACTTGGTTCTGTCTGGCCCTGGCCATACATATCTGAGTTTCTGTCCTCGGTTTTGCAAGATCCTGATGTGCTGAGATCGTCAGATTCCCCCAAATTAATGATCTGGAGGCTAACTTCTGGTCATCAATGATCTGCTGTGTTATTGATATGTCTGCAAAGATTGCAGACAAGTACATGATCGTAGATTGCATTTTGTTTCAAATCAGTCTATAGAGGTTTGTAACTTGCAAGCACCTCACCTAAAGGAATAACACAAACTAACGCAGGCGTCGGCAGTTTTGCGACCACATACTGTAGATGATGCATGTGTATCCCTACCTAATTCTTACCGGTTAATTAGTAGCAGCACCAATACTGTAGAGAGTAATAGCGGATTTTGGGTTCTTCTATTTGTTGGGCTAAATCATCGGACGTAATACGAACAATGACCACTGGTTGAATAGCAAGAGAAGATTGTAAATGTGTTACGGGTTGGCAATGAGGAGCTCATCAGCCATTAACAATTTATCTGGATTACATGTTTGCAAATTTATCTTTTGGGAGGGTTTTTAACACTCTCCCTTCAGCTTTGACAGCCTCTTGTCAAAGACTCAAAGTGCAAAACCTGTATAAAAACACTCTCTTTCTTAATGAAATTTGGCCGACCTACTCTTTGGCCGGCCCGGCATACATGTTTGCAAATTGCAACAATTAACAACAAGCTCTTGTTTGTACAGATTACAGACACGTACATGATATGGATTGCATTTCTTTAAAATCTATCTATAGAGGTTGCAACTTGCAAGCATTTCGCCTTTGTTTTCTGAAAGGGAATACGAACTAACCACACAGCCGTAGATATGCATGTGAAACCCTACCAAATTCTCGCCAGTCAGCACACTCTGGCAGTAGCGTCTCTCTCTATTTGCAGGACTAAATGGCACGTCACCTGAACACGAATCGCTGGTTGAATAATCAGACTGCAGAGAGGCTTGAGTGTGCTGTCAGTTGACTACTAGGAGTTCATAAGCCAGTTTAGTAGTAGTAACAGTTTTCTCACTTTTCTCTGGATTGCAACAACGGCAAGCGCTCTTCTTTGACCGGCTTTTAAAAGACACACAGAGCCGTGGTCACACAATTTGTTATGCCAACGTTAGCGTTTGTGCCCACCGAGGTTTTCAGTCAACTGGCTTGTGCGCCAATGTAGCGATTCTGTCCCGTAGACGAGTGATCGATGCGATGGTATAGGACGTACGTTAAACTTGAGGTGCCGGCCAAATCCCGTAGCCGTTTTAACTTCGTCCTGATGCGATGTATCCTGCATATGCATGTCCAAAATGGATGGATCGTGCTTAGCTCATGGGAGTAGCATCGATATATTGGCCCTGTTTGGATCTGGAGGGCTATTTAATAGCCTTTCAGAATCTTGCTATTTAAGAGTATTAAACGTAGATTATTGATAAAACCCATTCCATAACCCCTACGCTATTTTACGAGACGAATCTAACAAGGTATATTAATCCATGATTTGCTACAGTGATGCTACAGTAATCAGCCGCTAATCGTGGATTAATATACATCATTAGATTCGTCTCGCAAAATAGCCTAGGGGTTATGGAATCGGATTTATCGGTAATCTATGTTTAATACTTCTAAATAGCAAGATTCTGGAGGGCTATTTAATAGCTCGGAGCATCCAAACAAGACCATTGTATTATTGTGTGGCCAGTCAAAGAGTAACTTGGATAGGGCCGGTGGCTTGTTATATATATACTGGATTAGTTGCGCTCCTTAAATTTTCAGAACCATATGGAAGTGTACTCTCTCCGTCCAAGAAAAGACAAACTCTGGGTTTCCGTGTCCAACTTTGACTGTCCGTCTCATATGAAATTTTTTTATAATTCGTATTTTCGTTGTTGTTAGATGATAAAATATGATTAATATTTTATGCGATTAATATTTTATGCGTGACTTGTCTTTTTAATTTTTTTATATTTTTTAAAAATAAGACGGACGGTCAAACGTTGGGCACGAAAACCAGAGTTTGTTTTTTTTTGGGACGGAGGGAGTAGACGTGTATCATAGCAACCCTGACGAACTGATACTAACGTTCAGATCGATGGTTGATTGCACTGCACTGCAGATGAAAGAAAAAGATTCTTGCCGCTCGGTCAAGGCATGGAAGCAGACAGGACGTATTCGCAAACCTACAAAGAAAAGGTAATTAATGGCTCGCGATACGACGCATTGGTCAGCGATGACGAACAACAAGCGGGTTGACGGCTGTATCGGCATACCCGGCATCGGATGGCCGATGGCGGATGGCAACATTAGCTGCAGGATCCGATCGTGTATCCTGGACTGTTTCTAACCTCCCTGAACAAAACGAACGGACGTTAATAATCAAGCACCAGGCGGTTTGACTTTAAATGCCGGATGGACGAGCCGACGTATCGATGATCCATCTGGTTGCTGGATCGGGCCAGGAAAGTTTGCAGGTTGGTGCATGCGTTTGCACGGAACTCACCATGAGCTACCCACGGTCAAGGCGTCGTACGTACGCATTGCACGTACGTACAGCTCGATAGCTGCACTGGAACTGCACCTAGCTAGCGCCTAGCGCGACCTACATTGAACCTTCCAGCGTCCGTCCAAGTGTACGTACGATCAGAGCTAGCGCGCGCCGCGCGGTATATAAACACATCAACAAGCAGCCCCGACTCCATCGCGCACCCACACCGTCGTCAAAGTGTTTTTTTGGCATGCCAGCGCCCGGTTAATTAGCTGGCTCTCGCGCGCGGACGCATTTGCTAGTAGTTGCTAGCTAGCTCACTCGCTCTCGCGGCAGAGAGAGCCAGCGACGAAGGAGCGCGCGCCGCGCGGAGACCATGGAGCTCGTCGTCGCCAGGAGCCACGGGGCGAAGAAGCGCAGGGGCGCCAGCCAGCTCGGTGGCGGCTGCAGGGTCGCGCGGGGGAACGAGGCGAGGCTCCGCATCATCTTCCGCTGCGTCGCGCTGCTCGTGTGCTACCGCGACTGA
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CDS seq | ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCTATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTGTCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGATGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCTATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGTGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGATATGTTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAAGATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACGTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGATAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATATTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACTAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGTTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGCGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTATTTCGCACGCAGAATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCAGACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCACGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTGCACGGACTGCAGGTCCCCTCATAATACTGGAAACAAATCAAGGCTACTTCAGGGCGTTGACAGAAGAGAAAAGAACAGCACCAAACGTAACATCCAAACGCAGAAAGTACCAAGGAAGACCACAAGGATAGATGCGAAGGGGAACAACTATGAAAGTACAGAACATGGTGCTACAAGCCTCTTCAAGCTAGAGACTACTACTGCCTTGAAGCTTCAGATGAAAGAAAAAGATTCTTGCCGCTCGGTCAAGGCATGGAAGCAGACAGGACGTATTCGCAAACCTACAAAGAAAAGAGAGAGCCAGCGACGAAGGAGCGCGCGCCGCGCGGAGACCATGGAGCTCGTCGTCGCCAGGAGCCACGGGGCGAAGAAGCGCAGGGGCGCCAGCCAGCTCGGTGGCGGCTGCAGGGTCGCGCGGGGGAACGAGGCGAGGCTCCGCATCATCTTCCGCTGCGTCGCGCTGCTCGTGTGCTACCGCGACTGA
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Protein seq | MSSKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIYRPAERTFQSIYSWLLRGFRIDQEVYTMSVSVVVSRATEGYFWELMPMDSTDAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEVDDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYVHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGKIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILIAIGCDGNNQVLPMAFAFVESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDIRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPLVEGDEPPIPLGALHDDPPTMRRRLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVAADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPVQPRPRAPTVGAGPRPTAPISHAEFAAGIFGTGASSSHAGRTGPTSQFYDDDLHGADHHDVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSHGHIRAQGRRDRVLFIHMVLEQLMLTTTHFRRCTDCRSPHNTGNKSRLLQGVDRREKNSTKRNIQTQKVPRKTTRIDAKGNNYESTEHGATSLFKLETTTALKLQMKEKDSCRSVKAWKQTGRIRKPTKKRESQRRRSARRAETMELVVARSHGAKKRRGASQLGGGCRVARGNEARLRIIFRCVALLVCYRD |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
LOC_Os01g49950 | LOC_Os01g49950.1 | Chr01 | 28699896 | 28710027 | + | MSU_osa1r7 | ||
CDS seq | ATGTCAAGTAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCTATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAGTCTACACAATGTCAGTGTCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGACAGCACTGATGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCTATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGTGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGATATGTTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCGAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAAGATTGGCTTTGAACCAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATCATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACGTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGATAGCAATTGGGTGTGATGGGAACAACCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAACGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAACGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATATTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGCAATCTCGCAGACCACTAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGTTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGCGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTATTTCGCACGCAGAATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCAGACCACCACGACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCACGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTGCACGGACTGCAGGTCCCCTCATAATACTGGAAACAAATCAAGGCTACTTCAGGGCGTTGACAGAAGAGAAAAGAACAGCACCAAACGTAACATCCAAACGCAGAAAGTACCAAGGAAGACCACAAGGATAGATGCGAAGGGGAACAACTATGAAAGTACAGAACATGGTGCTACAAGCCTCTTCAAGCTAGAGACTACTACTGCCTTGAAGCTTCAGATGAAAGAAAAAGATTCTTGCCGCTCGGTCAAGGCATGGAAGCAGACAGGACGTATTCGCAAACCTACAAAGAAAAGAGAGAGCCAGCGACGAAGGAGCGCGCGCCGCGCGGAGACCATGGAGCTCGTCGTCGCCAGGAGCCACGGGGCGAAGAAGCGCAGGGGCGCCAGCCAGCTCGGTGGCGGCTGCAGGGTCGCGCGGGGGAACGAGGCGAGGCTCCGCATCATCTTCCGCTGCGTCGCGCTGCTCGTGTGCTACCGCGACTGA
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Protein seq | MSSKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIYRPAERTFQSIYSWLLRGFRIDQEVYTMSVSVVVSRATEGYFWELMPMDSTDAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEVDDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYVHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTEHKCYLQGVEKYHRNITSAFVASEMYSSVVGKIGFEPKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILIAIGCDGNNQVLPMAFAFVESENTESWYWFLERVHIAVVRMRPNVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDIRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEQSRRPLVEGDEPPIPLGALHDDPPTMRRRLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVAADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPVQPRPRAPTVGAGPRPTAPISHAEFAAGIFGTGASSSHAGRTGPTSQFYDDDLHGADHHDVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSHGHIRAQGRRDRVLFIHMVLEQLMLTTTHFRRCTDCRSPHNTGNKSRLLQGVDRREKNSTKRNIQTQKVPRKTTRIDAKGNNYESTEHGATSLFKLETTTALKLQMKEKDSCRSVKAWKQTGRIRKPTKKRESQRRRSARRAETMELVVARSHGAKKRRGASQLGGGCRVARGNEARLRIIFRCVALLVCYRD
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0595300 | SBH | 0.916307 | 0.456079 | 1.496882 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g47710 | RBH | 0.0 | 0.0 | 0.000000 |
Nipponbare | IRGSP 1.0 | RAP-db | Os01g0595300 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023470 | SBH | 0.115423 | 0.000000 | 0.938548 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0023790 | SBH | 0.267439 | 0.0 | 0.483934 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023200 | SBH | 0.000000 | 0.064466 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0022900 | SBH | 0.000000 | 13.148704 | 3.219382 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0539000 | SBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0467300 | RBH | 0.508023 | 0.2292105 | 0.1501465 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0022860 | SBH | 0.000000 | 0.056177 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0022810 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023060 | SBH | 0.529715 | 0.227037 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023190 | SBH | 0.0 | 1.635728 | 1.304630 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |