Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g43720 | OGI:01013090 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:25055772-25058195 | ||||||||
| Gene Symbol | CYP72A19, OsCYP72A19 | ||||||||||
| DNA seq | AGTTGCAAAATATTCGTTTTGCTATATTTTTAAAGTGTCGATTCAATCAAACCAAATATTTGACAATACCTTTTCTTTACAAACTAAATGGAGAATTAATTTATTGATATGGCTAAATTATTTTTTGGTGGCATGGTTGATTGGTATAAACCAAACATGCCATTTTTTTTAAAAAAAAAGCCTACAATGCATGATATGAACATCACAAGATCGACGATCAGATTGCCCTAAGCTTAATTGGTGCCCCATGCATCGGACGCAGCATCAACACAATATGGGGAGCGTGAGTGTAAGACGGCGCTAGCTCGAACTCGAAGCGCTGGAGAATCATACACAGCGCCATCTTGGCCTCGAGCAGCGCGAAGTTCTGGCCCATGCAGATCCTCGGGCCCCAGCCAAACGGGAAGAACGCGCCATGATCGTTGGACGCCCTGGAGATCCCCTCGGCGAACCTCTCCGGTTTGAACTCGTTCACATCGCTCCCCCAGATGTCTGGGTCATGGTGGATGAACAACAACGGTAGCTCGATCATCACGCCTGCAGGGTACTTGACGCCACCGATCTCCATCTCCTTGTATGTTTGCCGGACAAACCCAATTCCCGGCGGGTACAAGCGGAGAACCTCGTAAAGTATCATCGTCACCTGTATGTACCAAAGGTTAATTACCTCTAGTTGCCATGTGATTTAGTAATTTCAATATCATCTCTACATCTAAAAGATAACTTAAACATGGATTTCCTAAAAAAGTTACTTAATTTCAACATTTATTACTCACGTTTTGAGTTTGCTCAGGCCTTCATAATCAAGTTTGTTTTTCTGAAATAGGCTTAGGACCTCCTCCCTTGCACGGTGCTGCCATTCTGGGTGCATGCTTAGCACAACCATGGTCCATGTGAGGAGTATCGCTGTCGTCTCCATCCCTGCAAAATAGAACACTTTGCACTCTTCCATCACTTCTTCGATGGTCATCCCCGGGCCTGAATGTCCATTCTCGTCTGCATGCCTCGTGCTTGACTCTAGTAATATCCCGAGCAAATCATCTTTGGTTCTCTCGCCATCTTTCATAGCATGCATCCTTTTCTGGACCAGATCTCGTATAATTGATTCAACCTCGTTCTTAATTTGATACATCCTTCGGTTGTTTTTGGTAGGCAAGGACCTGAAAGGGCACACCGCTTCAGATTTTCAGTACAGAGAGGAACTACGAGTACTGAATAACAAACATTTAATTTCGATAGAAATTATGTATAACTGTAAGGTCTGGTTAGTGTTACAATAGAGGCGTGGAGCATAAACCACTAAATCAGTGTTGATGAACAGAGAAAAACAAACTCACATGTAGCCTGGAATGGAGATCTTCTGAATGGCACCCATGAAAAGCTCCTGTTGCTCAGCCTGCAACTGGAAAATCCTTCTTCCTTCAAGGTAGCTGCTGCCGAATGCGGTGCGAGAAATGACATCTCCGGTGAGGCTCTGCATCTCCGGCCAAACATCGATCTCATTCGAACCGTCAGAACCAAGAGACGCCGCCCATCTGCCGACCAGTTCTTCGCAGCACGCAGAAAACGCCGGCAGCATGAGCTGCAGAAGCATACATGATACATTACTCAAGGAAACAGTCACACAGTCTATCACGGTAAATACTTGTGCTGTAATATATAGATATCACAAAACTGTACTGTAATTTAATTCGTGTACCTTGAGCTTCTCGAGATGGAAGGCAGGGTTGAGGATCCGCCGGTGCTTGGCCCACTTCTCGCCCTCGTAGTTGGCCACGCCGTCGGCGAGCAGCTTCGACAGCACGGGGAACTTGAGCTTCTCGAAGTGGCCCATCTTGTTGGACAGCACGTCCTTGGCTATCTCGGCGTCGGCGATGGTCACCTTGGGGATGGGGCCGAACCAGGAGAGGCACGCCTTGCCGTGCTCCGCGATGGTCCGGTGCACGAACGGCGCCACGCGCGGCGCGATGTCGTGGCACCGCAGCGGCAGCGGCCTCGCCCATGCCTCCTTGCTCAGCCGGCCGTAGTCCTTGAGGTCGCCGGTGAGGAAGCGGTAGGACGTGCCACGGACGCCCTGCGCCCGCAGCGCCCGCTCCAGCCGCCGCGGCTGCCACCACAGCCGCACCAGCAGCCGGTGGACCTGCCACAGAAGCGCGAGCCCCAGGAGACCGTACACCATGGAGCTCCATGGCACCGAGGTCGGATCCATGATCAACACCCTCGAAAATGAGTAGCAAGCTGGAGTAGAATCTCTGGTCACTGTCAGCGGGCAGTGTACTTTGACCGGAAGGGACAGTATACGGTGTTGTGTACATGTGAATTCAGCGCATTCGAATCCGATTATATAGGAGTGTCGCTGGGACAGTTGGTCTTCGTGTGCTCATTTGTTTAAGGTTATCGATGTTAATCAAGGAAGTTGCTTGC
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| CDS seq | ATGGATCCGACCTCGGTGCCATGGAGCTCCATGGTGTACGGTCTCCTGGGGCTCGCGCTTCTGTGGCAGGTCCACCGGCTGCTGGTGCGGCTGTGGTGGCAGCCGCGGCGGCTGGAGCGGGCGCTGCGGGCGCAGGGCGTCCGTGGCACGTCCTACCGCTTCCTCACCGGCGACCTCAAGGACTACGGCCGGCTGAGCAAGGAGGCATGGGCGAGGCCGCTGCCGCTGCGGTGCCACGACATCGCGCCGCGCGTGGCGCCGTTCGTGCACCGGACCATCGCGGAGCACGGCAAGGCGTGCCTCTCCTGGTTCGGCCCCATCCCCAAGGTGACCATCGCCGACGCCGAGATAGCCAAGGACGTGCTGTCCAACAAGATGGGCCACTTCGAGAAGCTCAAGTTCCCCGTGCTGTCGAAGCTGCTCGCCGACGGCGTGGCCAACTACGAGGGCGAGAAGTGGGCCAAGCACCGGCGGATCCTCAACCCTGCCTTCCATCTCGAGAAGCTCAAGCTCATGCTGCCGGCGTTTTCTGCGTGCTGCGAAGAACTGGTCGGCAGATGGGCGGCGTCTCTTGGTTCTGACGGTTCGAATGAGATCGATGTTTGGCCGGAGATGCAGAGCCTCACCGGAGATGTCATTTCTCGCACCGCATTCGGCAGCAGCTACCTTGAAGGAAGAAGGATTTTCCAGTTGCAGGCTGAGCAACAGGAGCTTTTCATGGGTGCCATTCAGAAGATCTCCATTCCAGGCTACATGTCCTTGCCTACCAAAAACAACCGAAGGATGTATCAAATTAAGAACGAGGTTGAATCAATTATACGAGATCTGGTCCAGAAAAGGATGCATGCTATGAAAGATGGCGAGAGAACCAAAGATGATTTGCTCGGGATATTACTAGAGTCAAGCACGAGGCATGCAGACGAGAATGGACATTCAGGCCCGGGGATGACCATCGAAGAAGTGATGGAAGAGTGCAAAGTGTTCTATTTTGCAGGGATGGAGACGACAGCGATACTCCTCACATGGACCATGGTTGTGCTAAGCATGCACCCAGAATGGCAGCACCGTGCAAGGGAGGAGGTCCTAAGCCTATTTCAGAAAAACAAACTTGATTATGAAGGCCTGAGCAAACTCAAAACGTGA
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| Protein seq | MDPTSVPWSSMVYGLLGLALLWQVHRLLVRLWWQPRRLERALRAQGVRGTSYRFLTGDLKDYGRLSKEAWARPLPLRCHDIAPRVAPFVHRTIAEHGKACLSWFGPIPKVTIADAEIAKDVLSNKMGHFEKLKFPVLSKLLADGVANYEGEKWAKHRRILNPAFHLEKLKLMLPAFSACCEELVGRWAASLGSDGSNEIDVWPEMQSLTGDVISRTAFGSSYLEGRRIFQLQAEQQELFMGAIQKISIPGYMSLPTKNNRRMYQIKNEVESIIRDLVQKRMHAMKDGERTKDDLLGILLESSTRHADENGHSGPGMTIEEVMEECKVFYFAGMETTAILLTWTMVVLSMHPEWQHRAREEVLSLFQKNKLDYEGLSKLKT |
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| Function | Cytochrome P450 72A15 [UniProtKB/Swiss-Prot:Q9LUC5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g43720 | LOC_Os01g43720.1 | Chr01 | 25055772 | 25058195 | - | MSU_osa1r7 | ||
| CDS seq | ATGGATCCGACCTCGGTGCCATGGAGCTCCATGGTGTACGGTCTCCTGGGGCTCGCGCTTCTGTGGCAGGTCCACCGGCTGCTGGTGCGGCTGTGGTGGCAGCCGCGGCGGCTGGAGCGGGCGCTGCGGGCGCAGGGCGTCCGTGGCACGTCCTACCGCTTCCTCACCGGCGACCTCAAGGACTACGGCCGGCTGAGCAAGGAGGCATGGGCGAGGCCGCTGCCGCTGCGGTGCCACGACATCGCGCCGCGCGTGGCGCCGTTCGTGCACCGGACCATCGCGGAGCACGGCAAGGCGTGCCTCTCCTGGTTCGGCCCCATCCCCAAGGTGACCATCGCCGACGCCGAGATAGCCAAGGACGTGCTGTCCAACAAGATGGGCCACTTCGAGAAGCTCAAGTTCCCCGTGCTGTCGAAGCTGCTCGCCGACGGCGTGGCCAACTACGAGGGCGAGAAGTGGGCCAAGCACCGGCGGATCCTCAACCCTGCCTTCCATCTCGAGAAGCTCAAGCTCATGCTGCCGGCGTTTTCTGCGTGCTGCGAAGAACTGGTCGGCAGATGGGCGGCGTCTCTTGGTTCTGACGGTTCGAATGAGATCGATGTTTGGCCGGAGATGCAGAGCCTCACCGGAGATGTCATTTCTCGCACCGCATTCGGCAGCAGCTACCTTGAAGGAAGAAGGATTTTCCAGTTGCAGGCTGAGCAACAGGAGCTTTTCATGGGTGCCATTCAGAAGATCTCCATTCCAGGCTACATGTCCTTGCCTACCAAAAACAACCGAAGGATGTATCAAATTAAGAACGAGGTTGAATCAATTATACGAGATCTGGTCCAGAAAAGGATGCATGCTATGAAAGATGGCGAGAGAACCAAAGATGATTTGCTCGGGATATTACTAGAGTCAAGCACGAGGCATGCAGACGAGAATGGACATTCAGGCCCGGGGATGACCATCGAAGAAGTGATGGAAGAGTGCAAAGTGTTCTATTTTGCAGGGATGGAGACGACAGCGATACTCCTCACATGGACCATGGTTGTGCTAAGCATGCACCCAGAATGGCAGCACCGTGCAAGGGAGGAGGTCCTAAGCCTATTTCAGAAAAACAAACTTGATTATGAAGGCCTGAGCAAACTCAAAACGTGA
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| Protein seq | MDPTSVPWSSMVYGLLGLALLWQVHRLLVRLWWQPRRLERALRAQGVRGTSYRFLTGDLKDYGRLSKEAWARPLPLRCHDIAPRVAPFVHRTIAEHGKACLSWFGPIPKVTIADAEIAKDVLSNKMGHFEKLKFPVLSKLLADGVANYEGEKWAKHRRILNPAFHLEKLKLMLPAFSACCEELVGRWAASLGSDGSNEIDVWPEMQSLTGDVISRTAFGSSYLEGRRIFQLQAEQQELFMGAIQKISIPGYMSLPTKNNRRMYQIKNEVESIIRDLVQKRMHAMKDGERTKDDLLGILLESSTRHADENGHSGPGMTIEEVMEECKVFYFAGMETTAILLTWTMVVLSMHPEWQHRAREEVLSLFQKNKLDYEGLSKLKT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.082510 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0627600 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g43750 | SBH | 0.549879 | 0.562265 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0627600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0026010 | SBH | 0.380584 | 1.018520 | 0.660300 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0025650 | SBH | 0.089938 | 0.415210 | 0.324732 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0025980 | SBH | 0.343233 | 0.0 | 1.553312 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0025280 | RBH | 0.0 | 0.030343 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0025010 | RBH | 30.947676 | 29.418953 | 13.138362 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0420900 | RBH | 12.2575155 | 6.776026 | 0.45269 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0024680 | RBH | 0.875078 | 1.099321 | 1.883906 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0385300 | SBH | 5.83854 | 4.3827855 | 1.476269 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0024960 | SBH | 1.122906 | 0.108676 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0024950 | SBH | 1.926548 | 10.912550 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0025190 | RBH | 26.054064 | 36.592171 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0025220 | SBH | 0.000000 | 0.122537 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023450 | RBH | 0.515966 | 0.315297 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G025350 | SBH | 0.087947 | 0.756523 | 0.201044 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0025100 | SBH | 0.0 | 0.000000 | 0.227597 |
