Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g18470 | OGI:01012660 | 11/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:10380948-10387869 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAAAATTTTCGCTTCTGCCTCCGGGCAACGGCTGGCGCCCCCCCAGACCGCGGCGCCAGGGTGGCTGGTGCCCCCCTCCTCCCCCCATCGAAGCCCTTCTGCCTCCGGGCCTCGGCTGGCGCCGCCCTCATGGACCACGGTGCCAGGGTAGTTGGCACCGCCCTCCCGCCAGCCCGAAACCCTTCTGCCTCACGGCACTGGCTGGCGCCGCCCTCCCCAACCGCGGCGCCAGGGTGGTTGGCGCCGCCCTCTGCCTCCCTGCAAATTGAAGATCCATATTGCACAAATGTACCAATTCACAGTTCGCAATTCAAATCACAATTCACAAATTCGTATGGACTAAAACAAGTTCCAATTGCACAAATCACAATGCCAAAAGTCCATCACATAGTCCTCACATAGTCCATCACATATTCCACACATCAAACAATGCCAAAAGTCCATCACATATTCCACACATTAAACAATGCCAAAAGTCCATCCTATATTCCACACATGAAACAATGTCAAAAGTCCATCACATAGTCCATCACATTTTATATCACATAGTGCACCACATATGTCATACTACCAACAAATAGATTAACTTCATACAAATCACTTCTTCCGTTGGCATCGAATAGCTTGCGAGCCCGGAGTGTACCTACATTTGAAAATCCAATGTTTAAAACATTTTAAAAACAAAATGAGGGAAATCAAATAACATTTGAGAATGGTAAGCTCATTTTACCTCTTTTTCGCTGCCCGAGTGGATCGCAAGTTGTATTGCGTGGGTTGCGTCCTCTGAGGCGCGTCGGGAAGCTGCGACATGTCTATCTCCTCAGCGTCTGGTGCGACGTAGTCCTCATCCTCCTCGTCGTCGTCGTCATCGTCGTCGCTAGGTGGAGCCGGCGCCTTCCCCTTTCCCCTCCCTTGCGGAATGCGTGACGACGACGAGCCACCAACTTCTTCACGCTCTTCTATCCTGATGGAGTGTCGAGCGGTACTTGGACGCACGGAGTGAGGTAGTGGTGGTGGTAGTCTCCGCGGTTGGTACATGTCGTCCAATCCAACTGACTTGCAACCTAATCTTGCTGCAAGTTTCCGGCACCTTTGACGAACTTTCTGCATTTCAAAAAAAAAAGAAGTTTGTTAGGCATAACTCAAGTAATGCAAAGTGCTAAATAAATTTTACCTCTAAAACATTGCGGAGTGTATTCTCCGTGTCCTCACCACCCCTCGGAGCTTGGAGGGCATGGCCCATTTCATTCACACTCCTGAGGAGCTCTCTCGACTGAAAGCGTGAGAAGATATATGTTAGGGTCTAGGGTGCAAATGGAAATAACTTTGACAAATGCAAGAAAACTTACGACTCTGTCTCTAAGCGGGGCGTGCTCCATTTGATATCCAACTCTAGTCCGGACATCATAGGGATTCCGTCCCTCATCGGAGTCGCGGTCATCCTCTATGTCGGCTTCCGTCCAAGTAGGGCGGAGGAACAGTCTATATGTCCTATGCAGCCAACGAAGGTACTCTGAGAAAAGATGATTTTGGTGTATAGTCTCAATGTACCTGTCGTTCCTTCCGGCTGTCCTCCATTCATCAATGTATCTATTATGCTCTAGCCCCCAGTCTTTCACCTTCTTTGTTCTCACCCTGTCATACCTAGACAAGTAGAAGGTGATGAAACAATAGTGAGCATCGACAAGGGTTAAATGGTACAAAATTGAACATTGACAATGAAAGCAAACAAAGATAAGAAATATTTACTTGTGTAATTCAACTCCAGTTGAGATGTCCTCAACCGGCCAGTCTTGTTTCTTCCCGAACTATCGCATGACACGGTGCGGAAGGTGGTACTCAACTGCCCAGAAATAAATCAATGGGCACTGGTACATGAAATAGTCAGAGTCTCGATTGCACATCTAGTTCAGGGTCAGGCTTGAAGCCTCATTTGTGTGGTATGGTAACCATTCAATCTGCAAAAGTTGAAGAGATGTCGTTGGTTAGTATCTCAATTAAAGAAGTAAATGTCTAACTAGAAGTGATATTGGAAGTACTTACATGTTAAGGCTGTAAGCAGTCCATCTCATTGACATAATGCTTGTATGCCACATCCTGGTGAGCATGTGCAGTGGCAGTATTCTCAAAAAGGTAGGCCACTGTCTTCTCCATGTTTGGCTCATTGTAGGGCCAAGGAGTGAAGCTTTGCCTCCACTTAGGCCTTCCGTCCTTAGGTACGGGATGTACCTATCGTCAAACACTGGGGGAGCATGAGCTCTGACTCGGAGCGGTTGAAGTACCTGCATTAGCAATTGTAAATCAATTAGTTAATATAATGTCAAATACACGCTATAGATACTTATGCACAAGTGAATCAATGCCGATGCATACCCTCCCTGCCTCGATCGCAGCCCCGCGATAACGGGCCTCGTAGTACGCCTCCAAGGCTGGGTAAGTCGGCGGTTGTCTCTCCTCGGCCATCCTACATGAAAAAGTAATAAATTCACCGTTAGTTACCAATGTGACATATATTAACAGAAAATGAATGCGAGAACATGAGTAGGAAAACAAATTATTTACCTCCCTAACACTTATATTTTTTTTGGACTTCTTCTTTTTTGGACGCTTAGGACACTTAGTTTTCTTGTGACCCTCCTGGTGACACAATGAGCATCTATTTTGCACCGGCGCAGCATCAAGTTGAACGCATGAAGGTGGTTTCCTTCCAGAACCACCCAGACCCGAGTCCATTTCGTTCTTGAATCGTTTCGATCTCCTCTTCCCTCTTGTTTTAATCTTCAACTTTAGGTCAGCAACAAATTCTTCACCATCGTACGGTGGCCACTGTGTGGGGTCGAGGTATGGCTCAAAGCGACTTGCCCATGTGTTCACAACGGCTCTTGAAGAGAACTGATACGGCATTCGGTTGGGAGATTCCTCATCAATTGCATGAATCAGATAAACGTGTATAAGATGTGAGCAAGGCATATGGTAGAGCAATGGCCTTTGGCAAGAACATGAGTTCCCCTCACCTTCAACTTTGAAGGCTCTTGCGCCGAATCTAACACCACCACGTGTTATACCACCCCTCTCTGTGACCTCGTATGTCTTTTTCTGCTTATCGAAACACCTTGCAGTGTGTTTGTTCACCTTACTTTTTTGCACCTTCATCTTACTATCAACCTTGGTGGACCAACGCTGCCCTAACTGGACTCACTTCAAAGCTTCATCATGTCTGTTCACAAAGTAGTCATTGCACTTCATGAACGTAAATGATACTATGGCCATCACTGGAAGCTTACGAACACCAACTAGCACGCTATTGAACTGTTCGGCTATGTTGGTTGTCATGTAACCCCACCGGCGGCCATTTCTATCGTATGCACGAGACCACTTATCTTTATCCAACAACTCATCTTCAAGCCGTTTACGAGGACCTTCGGGAATACGCTGCCTTAGTGCCTCAACATCCCTCTCAAATATCCACTTCTCGTCAATCTGACATATCCTTAGGAGCTCTTTTGTCTGGTGCTTGTCCGCACCGGCCTTGTGGAAATTAGCACTGAAGTGCCTCATGCACCATCGGTGGTGAACCGGTGGCAATCCTGAAACAGGAGTCGTCATGGCATTCATTATACCAGCATGTCGATCTGAGATAATACAAACCTCCCTATGCGGCCCAACCACAACCCGTCGGACAAGATCGATAAACCAGCACCAGTCTCGTGAATTCTCTTTCTCCACCAAGGCAAAAGCTAAAGGTACAAGTTGGTCCTCCGCATCAGCTGATAATGCAGTCATCAAGGCACCACTGTATTTCCCAGTTAGGAAGGTTGCATCTATAGTTAGTACTGGCCTACAATGCTTAAAAGCCTCAATGGACGGACCAAAGCACCAGAATGCACGCATAAAAATTTTCTTGGTCACTCCATCAACGTTGACAACCCTATCAGGATGAGTATCGATGTGGTAGACCATACTGGGATTCCTCTGCTTAATGGCTTGCAGCAAAGTGGGCAAACGGACATACGCTTCACCCCATTCACTGTAAATGAGCTTCATAGCCTCCTCTCGTGCCTTCCAAGCCTTGCCATACTTCACCCTATACTGGAAAACCTCAAATATATACAAAGCTAACGCAGAAGCAAAGAGTGTAGGTTGCAGTTTTATGGCATTGCATAACCTATTTGCTATGAACTTTGATGTCAGCTGCTGGTGGCTCCCTGAACCTTCGGCAGTAGCACAACTATGTTCCTTACCTACCCGTGATATCCTCCACGTGCCAATAGACCTCTTAGTTGCATGGACCTTCCATTTGCACCGTGGGTTTTCACATTTAACAGTGTACCTCCTATTTGCGGCAGAATTGACAACACGGTATGGACGATGGTGCACGATGGCGTAATCCTGGAGCTATAGCTTCAATGCGACCATGGATGGGAACTCTAAACCCTTTCTGAGACCATCCACCCGGAATAGTTCTGGCAACTGATCTAGGTTGATGCCGCCATCTAGTAGTGCACCATGGGCATGTGTTAAGTCCCTAAACTCAGGAATGTCCGGCTTCCTCCCAAACACCTTCTCAAACGCACGACATTCCTCTAATGCTAACTTGTCATTATTAGTAAGTGGAGGGAATGGACGGTCATTATCAGAGTCTTCAGCAAATTCAACATCATATTGCTCAACACTTGCCTCCTCGTCAACATCATCTCTATTGACTTCTACTGAGACAGAATCGTGACCACCACTCAATTCGACATCAAAGTAATCATCTGGATTCACATATTGGCCTGCTACTTCTGTCGGGTATTCAGGGTTGACTCCGTACGATGACCAATGAACACTCGCCGACAAATGTTCACTTAGATCAAGCCCCTCTTGTACTAACTCCCTTTTCATCTCCCTCGCTACATCCACATCATCACTACCGCAATGTCTCTTTGATGGTCCTGCCTCCCATAAATCATTTCCAAGCAAAGGTCTCTTCTTCTCTCCTTCCCCCTCCAAGTCTTCTCGTACCAACTCAGTCTTACTTGCACCCCCTCCACGACGAGAATAATATGTCAAAATTCTTCTCAACGTAATGATAAGAAGGAGATTTGTTTAGATCCAAATTTTCTACGGTACGAACTAACTTTGATGCAAACACCTCTAGATATCTAAACTGAGACTCTTTTACCAAATCAAAGTAAACTTCCCATTCCAACTGACCTATCACATTTAATATATACTTATGCCCTTGACCAACATCGTATCTCCCATAAAAACGAATCTCCACATTATCCTCGGTCCATCCAAGAACTTCTTTCACTCGTGATCTTAGTTCATCTAGAGTTGGGTGGGTGGGAAACAAAATGGTCTTCAATGACATATCCTCAAACTCAACATGTGCACCAACATAAGGTTCCACCACTCTACCACCGTAGTAAACACGAACAAGTCTATCCATCTACACCAAAAAATCAAATGTAACTTTGCAACAAAAATTAAATCTTCATTCCTAAACGTAGTCCAAACCGACATATTATAACCAATGCATAACTTAAATTGTCCCAAAGCTACTACTCCAAAAAAATATTTAATCCACCTACAACTATCAACAAGTTTACTAGTGCATTACACATCGAAATATTACAAATACTCCGTCATACAACCCAACCTAGTTCTAGTTAACTATAATCAATTTATATAATGCAACCAAAATTTTCTCACCTTCATATAATTAATGGTTAAAAGTTTAACCTATAGACTATAGCATCAAGTCCATCAAATTAAAATTACTTTCATGCCTCAACCATAATTTTTCATCCATCCATCCAACCAAACCATCCAAAAATTAACATTACCACATATATGGTTAAAAAAATCGTGACACCAATGAGTACATTGCAAACATGTAGCACTACAACAAGCCAATCCTAAGAACAAATGCTAAAAATCACAAATTTGGGTAAAACAGGGGTTCTAGGGTTACCCACCGATCTACAAATTCAACCACTAAAAACGAAAAAAAAGAGGGGTGAATGAAAGAGTCTACCTTTCTCTTCGATTTCCACAAAAAATCCCGCAAAAAACGAGTTCAAATGGAGTGGATTTGAGGTAGGGAGGTGAGGGGGAGAGAGAGGGGGAGAGCTGCTGCTCCTCAGCTCGGGCTGGTGCTTGGGCGAAAATGGGAGTGGGGAGGAGATAGGTGGTGGGGCCCACGGGGTTTAAGGGGTCGGCCCACAGAGGAGGGGCGCGCTAGCCATGCTGGCGCCGTGAAAGGAGGGGCGGCGCCAGTGTGGCTGGCGCCCCCATTCTGCCCAGTCAGCACCTCCACGACAGCCCTAGTGCCATGGTGGCACGGGCACGGTGCCAGTGTGGCTGGCGCCGCCATGTTGGGGTACAGCGCCAGCCACTCTGGCGCCCCAAAAAGGACCATTTCCGGTTAAAGTTTTCCCAGGGATCTATTTGTAAAATAAGTTTTCAAAAAGGATTAAAATGTAAAAATTTCAGGCGAGGGTAGTGGGACAGCGGTGGCCGTGGAAAACGGCGACAGCCGCAGCAGTAGAAGGATGCGCGGAGGCACGGGCGCTGCTAGCACTTACCCTCGCTACGAGCCCCACCACCTCGGGTTGCACGTATAGCCGGGAGGTTAATTAGTTGCTCGATTGTTCTCTCTTTTCCCCTCTATCTTTTAGCTCATAAAAAAATTTTATGTGAACCTCCTACCGTCCAATATTGTACCTGCTCTAGCAGTGCATGCATATATGGGTGTGAGCACCGGGTGCGCACGTGTAAATGGATCTGTATATACGGTGCACTCCTCGAAGCATAGCACTGACAACGCCCATCACCACCAAAGCTCTCAAGGCGAAGCTCATGCACGACGGCATTTGCGCCGCCGCCGTCGAAGAGGACGATCAAGCACGCGCTGCTGCCGCTGCCTCCATCCAT
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| CDS seq | ATGGATGGAGGCAGCGGCAGCAGCGCGTGCTTGATCGTCCTCTTCGACGGCGGCGGCGCAAATGCCGTCGTGCATGAGCTTCGCCTTGAGAGCTTTGGTGGTGATGGGCGTTGTCAGTGCTATGCTTCGAGGAGTGCACCGTATATACAGATCCATTTACACGTGCGCACCCGGTGCTCACACCCATATATGCATGCACTGCTAGAGCAGATGGATAGACTTGTTCGTGTTTACTACGGTGGTAGAGTGGTGGAACCTTATGTTGGTGCACATGTTGAGTTTGAGGATATGTCATTGAAGACCATTTTGTTTCCCACCCACCCAACTCTAGATGAACTAAGATCACGAGTGAAAGAAGTTCTTGGATGGACCGAGGATAATGTGGAGATTCGTTTTTATGGGAGATACGATGTTGGTCAAGGGCATAAGTATATATTAAATGTGATAGGGGGTGCAAGTAAGACTGAGTTGGTACGAGAAGACTTGGAGGGGGAAGGAGAGAAGAAGAGACCTTTGCTTGGAAATGATTTATGGGAGGCAGGACCATCAAAGAGACATTGCGGTAGTGATGATGTGGATGTAGCGAGGGAGATGAAAAGGGAGTTAGTACAAGAGGGGCTTGATCTAAGTGAACATTTGTCGGCGAGTGTTCATTGGTCATCGTACGGAGTCAACCCTGAATACCCGACAGAAGTAGCAGGCCAATATGTGAATCCAGATGATTACTTTGATGTCGAATTGAGTGGTGGTCACGATTCTGTCTCAGTAGAAGTCAATAGAGATGATGTTGACGAGGAGGCAAGTGTTGAGCAATATGATGTTGAATTTGCTGAAGACTCTGATAATGACCGTCCATTCCCTCCACTTACTAATAATGACAAGTTAGCATTAGAGGAATGTCGTGCGTTTGAGAAGGTGTTTGGGAGGAAGCCGGACATTCCTGAGTTTAGGGACTTAACACATGCCCATGGTGCACTACTAGATGGCGGCATCAACCTAGATCAGTTGCCAGAACTATTCCGGCTCCAGGATTACGCCATCGTGCACCATCGTCCATACCGTGTTGTCAATTCTGCCGCAAATAGGAGGTACACTGTTAAATGTGAAAACCCACGGTGCAAATGGAAGGTCCATGCAACTAAGAGGTCTATTGGCACGTGGAGGATATCACGGGTAGGTAAGGAACATAGTTGTGCTACTGCCGAAGGTTCAGGGAGCCACCAGCAGCTGACATCAAAGTTCATAGCAAATAGGTTATGCAATGCCATAAAACTGCAACCTACACTCTTTGCTTCTGCGTTAGCTTTGTATATATTTGAGGTTTTCCAGTATAGGGTGAAGTATGGCAAGGCTTGGAAGGCACGAGAGGAGGCTATGAAGCTCATTTACAGTGAATGGGGTGAAGCGTATGTCCGTTTGCCCACTTTGCTGCAAGCCATTAAGCAGAGGAATCCCAGTATGGTCTACCACATCGATACTCATCCTGATAGGGTTGTCAACGTTGATGGAGTGACCAAGAAAATTTTTATGCGTGCATTCTGGTGCTTTGGTCCGTCCATTGAGGCTTTTAAGCATTGTAGGCCAGTACTAACTATAGATGCAACCTTCCTAACTGGGAAATACAGTGGTGCCTTGATGACTGCATTATCAGCTGATGCGGAGGACCAACTTGTACCTTTAGCTTTTGCCTTGGTGGAGAAAGAGAATTCACGAGACTGGTGCTGGTTTATCGATCTTGTCCGACGGGTTGTGGTTGGGCCGCATAGGGAGGTTTGTATTATCTCAGATCGACATGCTGGTATAATGAATGCCATGACGACTCCTGTTTCAGGATTGCCACCGGTTCACCACCGATGGTGCATGAGGCACTTCAGTGCTAATTTCCACAAGGCCGGTGCGGACAAGCACCAGACAAAAGAGCTCCTAAGGATATGTCAGATTGACGAGAAGTGGATATTTGAGAGGGATGTTGAGGCACTAAGGCAGCGTATTCCCGAAGGTCCTCGTAAACGGCTTGAAGATGAGTTGTTGGATAAAGATAAGTGGTCTCGTGCATACGATAGAAATGGCCGCCGGTGGGGTTACATGACAACCAACATAGCCGAACAGTTCAATAGCGTGCTAGTTGGTGTTCGTAAGCTTCCAGTGATGGCCATAGTATCATTTACGTTCATGAAGTGCAATGACTACTTTGTGAACAGACATGATGAAGCTTTGAAGTGTTTCGATAAGCAGAAAAAGACATACGAGGTCACAGAGAGGGGTGGTATAACACGTGGTGGTGTTAGATTCGGCGCAAGAGCCTTCAAAGTTGAAGGTGAGGGGAACTCATGTTCTTGCCAAAGGCCATTGCTCTACCATATGCCTTGCTCACATCTTATACACGTTTATCTGATTCATGCAATTGATGAGGAATCTCCCAACCGAATGCCGTATCAGTTCTCTTCAAGAGCCGTTGTGAACACATGGGCAAGTCGCTTTGAGCCATACCTCGACCCCACACAGTGGCCACCGTACGATGGTGAAGAATTTGTTGCTGACCTAAAGTTGAAGATTAAAACAAGAGGGAAGAGGAGATCGAAACGATTCAAGAACGAAATGGACTCGGGTCTGGGTGGTTCTGGAAGGAAACCACCTTCATGCGTTCAACTTGATGCTGCGCCGGTGCAAAATAGATGCTCATTGTGTCACCAGGAGGGTCACAAGAAAACTAAGTGTCCTAAGCGTCCAAAAAAGAAGAAGATGGCCGAGGAGAGACAACCGCCGACTTACCCAGCCTTGGAGGCGTACTACGAGGCCCGTTATCGCGGGGCTGCGATCGAGGCAGGGAGGGTACTTCAACCGCTCCGAGTCAGAGCTCATGCTCCCCCAGTGTTTGACGATAGGTACATCCCGTACCTAAGGACGGAAGGCCTAAGTGGAGGCAAAGCTTCACTCCTTGGCCCTACAATGAGCCAAACATGGAGAAGACAGTGGCCTACCTTTTTGAGAATACTGCCACTGCACATGCTCACCAGGATGTGGCATACAAGCATTATGTCAATGAGATGGACTGCTTACAGCCTTAACATGTATGACAGGGTGAGAACAAAGAAGGTGAAAGACTGGGGGCTAGAGCATAATAGATACATTGATGAATGGAGGACAGCCGGAAGGAACGACAGGACATATAGACTGTTCCTCCGCCCTACTTGGACGGAAGCCGACATAGAGGATGACCGCGACTCCGATGAGGGACGGAATCCCTATGATGTCCGGACTAGAGTTGGATATCAAATGGAGCACGCCCCGCTTAGAGACAGAGTCTCGAGAGAGCTCCTCAGGAGTGTGAATGAAATGGGCCATGCCCTCCAAGCTCCGAGGGGTGGTGAGGACACGGAGAATACACTCCGCAATGTTTTAGAGAAAGTTCGTCAAAGGTGCCGGAAACTTGCAGCAAGATTAGGTTGCAAGTCAGTTGGATTGGACGACATGTACCAACCGCGGAGACTACCACCACCACTACCTCACTCCGTGCGTCCAAGTACCGCTCGACACTCCATCAGGATAGAAGAGCGTGAAGAAGTTGGTGGCTCGTCGTCGTCACGCATTCCGCAAGGGAGGGGAAAGGGGAAGGCGCCGGCTCCACCTAGCGACGACGATGACGACGACGACGAGGAGGATGAGGACTACGTCGCACCAGACGCTGAGGAGATAGACATGTCGCAGCTTCCCGACGCGCCTCAGAGGACGCAACCCACGCAATACAACTTGCGATCCACTCGGGCAGCGAAAAAGAGGGAGGCAGAGGGCGGCGCCAACCACCCTGGCGCCGCGGTTGGGGAGGGCGGCGCCAGCCAGTGCCGTGAGGCAGAAGGGTTTCGGGCTGGCGGGAGGGCGGTGCCAACTACCCTGGCACCGTGGTCCATGAGGGCGGCGCCAGCCGAGGCCCGGAGGCAGAAGGGCTTCGATGGGGGGAGGAGGGGGGCACCAGCCACCCTGGCGCCGCGGTCTGGGGGGGCGCCAGCCGTTGCCCGGAGGCAGAAGCGAAAATTTTGA
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| Protein seq | MDGGSGSSACLIVLFDGGGANAVVHELRLESFGGDGRCQCYASRSAPYIQIHLHVRTRCSHPYMHALLEQMDRLVRVYYGGRVVEPYVGAHVEFEDMSLKTILFPTHPTLDELRSRVKEVLGWTEDNVEIRFYGRYDVGQGHKYILNVIGGASKTELVREDLEGEGEKKRPLLGNDLWEAGPSKRHCGSDDVDVAREMKRELVQEGLDLSEHLSASVHWSSYGVNPEYPTEVAGQYVNPDDYFDVELSGGHDSVSVEVNRDDVDEEASVEQYDVEFAEDSDNDRPFPPLTNNDKLALEECRAFEKVFGRKPDIPEFRDLTHAHGALLDGGINLDQLPELFRLQDYAIVHHRPYRVVNSAANRRYTVKCENPRCKWKVHATKRSIGTWRISRVGKEHSCATAEGSGSHQQLTSKFIANRLCNAIKLQPTLFASALALYIFEVFQYRVKYGKAWKAREEAMKLIYSEWGEAYVRLPTLLQAIKQRNPSMVYHIDTHPDRVVNVDGVTKKIFMRAFWCFGPSIEAFKHCRPVLTIDATFLTGKYSGALMTALSADAEDQLVPLAFALVEKENSRDWCWFIDLVRRVVVGPHREVCIISDRHAGIMNAMTTPVSGLPPVHHRWCMRHFSANFHKAGADKHQTKELLRICQIDEKWIFERDVEALRQRIPEGPRKRLEDELLDKDKWSRAYDRNGRRWGYMTTNIAEQFNSVLVGVRKLPVMAIVSFTFMKCNDYFVNRHDEALKCFDKQKKTYEVTERGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDEESPNRMPYQFSSRAVVNTWASRFEPYLDPTQWPPYDGEEFVADLKLKIKTRGKRRSKRFKNEMDSGLGGSGRKPPSCVQLDAAPVQNRCSLCHQEGHKKTKCPKRPKKKKMAEERQPPTYPALEAYYEARYRGAAIEAGRVLQPLRVRAHAPPVFDDRYIPYLRTEGLSGGKASLLGPTMSQTWRRQWPTFLRILPLHMLTRMWHTSIMSMRWTAYSLNMYDRVRTKKVKDWGLEHNRYIDEWRTAGRNDRTYRLFLRPTWTEADIEDDRDSDEGRNPYDVRTRVGYQMEHAPLRDRVSRELLRSVNEMGHALQAPRGGEDTENTLRNVLEKVRQRCRKLAARLGCKSVGLDDMYQPRRLPPPLPHSVRPSTARHSIRIEEREEVGGSSSSRIPQGRGKGKAPAPPSDDDDDDDEEDEDYVAPDAEEIDMSQLPDAPQRTQPTQYNLRSTRAAKKREAEGGANHPGAAVGEGGASQCREAEGFRAGGRAVPTTLAPWSMRAAPAEARRQKGFDGGRRGAPATLAPRSGGAPAVARRQKRKF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g18470 | LOC_Os01g18470.1 | Chr01 | 10380948 | 10387869 | - | MSU_osa1r7 | ||
| CDS seq | ATGGATGGAGGCAGCGGCAGCAGCGCGTGCTTGATCGTCCTCTTCGACGGCGGCGGCGCAAATGCCGTCGTGCATGAGCTTCGCCTTGAGAGCTTTGGTGGTGATGGGCGTTGTCAGTGCTATGCTTCGAGGAGTGCACCGTATATACAGATCCATTTACACGTGCGCACCCGGTGCTCACACCCATATATGCATGCACTGCTAGAGCAGATGGATAGACTTGTTCGTGTTTACTACGGTGGTAGAGTGGTGGAACCTTATGTTGGTGCACATGTTGAGTTTGAGGATATGTCATTGAAGACCATTTTGTTTCCCACCCACCCAACTCTAGATGAACTAAGATCACGAGTGAAAGAAGTTCTTGGATGGACCGAGGATAATGTGGAGATTCGTTTTTATGGGAGATACGATGTTGGTCAAGGGCATAAGTATATATTAAATGTGATAGGGGGTGCAAGTAAGACTGAGTTGGTACGAGAAGACTTGGAGGGGGAAGGAGAGAAGAAGAGACCTTTGCTTGGAAATGATTTATGGGAGGCAGGACCATCAAAGAGACATTGCGGTAGTGATGATGTGGATGTAGCGAGGGAGATGAAAAGGGAGTTAGTACAAGAGGGGCTTGATCTAAGTGAACATTTGTCGGCGAGTGTTCATTGGTCATCGTACGGAGTCAACCCTGAATACCCGACAGAAGTAGCAGGCCAATATGTGAATCCAGATGATTACTTTGATGTCGAATTGAGTGGTGGTCACGATTCTGTCTCAGTAGAAGTCAATAGAGATGATGTTGACGAGGAGGCAAGTGTTGAGCAATATGATGTTGAATTTGCTGAAGACTCTGATAATGACCGTCCATTCCCTCCACTTACTAATAATGACAAGTTAGCATTAGAGGAATGTCGTGCGTTTGAGAAGGTGTTTGGGAGGAAGCCGGACATTCCTGAGTTTAGGGACTTAACACATGCCCATGGTGCACTACTAGATGGCGGCATCAACCTAGATCAGTTGCCAGAACTATTCCGGCTCCAGGATTACGCCATCGTGCACCATCGTCCATACCGTGTTGTCAATTCTGCCGCAAATAGGAGGTACACTGTTAAATGTGAAAACCCACGGTGCAAATGGAAGGTCCATGCAACTAAGAGGTCTATTGGCACGTGGAGGATATCACGGGTAGGTAAGGAACATAGTTGTGCTACTGCCGAAGGTTCAGGGAGCCACCAGCAGCTGACATCAAAGTTCATAGCAAATAGGTTATGCAATGCCATAAAACTGCAACCTACACTCTTTGCTTCTGCGTTAGCTTTGTATATATTTGAGGTTTTCCAGTATAGGGTGAAGTATGGCAAGGCTTGGAAGGCACGAGAGGAGGCTATGAAGCTCATTTACAGTGAATGGGGTGAAGCGTATGTCCGTTTGCCCACTTTGCTGCAAGCCATTAAGCAGAGGAATCCCAGTATGGTCTACCACATCGATACTCATCCTGATAGGGTTGTCAACGTTGATGGAGTGACCAAGAAAATTTTTATGCGTGCATTCTGGTGCTTTGGTCCGTCCATTGAGGCTTTTAAGCATTGTAGGCCAGTACTAACTATAGATGCAACCTTCCTAACTGGGAAATACAGTGGTGCCTTGATGACTGCATTATCAGCTGATGCGGAGGACCAACTTGTACCTTTAGCTTTTGCCTTGGTGGAGAAAGAGAATTCACGAGACTGGTGCTGGTTTATCGATCTTGTCCGACGGGTTGTGGTTGGGCCGCATAGGGAGGTTTGTATTATCTCAGATCGACATGCTGGTATAATGAATGCCATGACGACTCCTGTTTCAGGATTGCCACCGGTTCACCACCGATGGTGCATGAGGCACTTCAGTGCTAATTTCCACAAGGCCGGTGCGGACAAGCACCAGACAAAAGAGCTCCTAAGGATATGTCAGATTGACGAGAAGTGGATATTTGAGAGGGATGTTGAGGCACTAAGGCAGCGTATTCCCGAAGGTCCTCGTAAACGGCTTGAAGATGAGTTGTTGGATAAAGATAAGTGGTCTCGTGCATACGATAGAAATGGCCGCCGGTGGGGTTACATGACAACCAACATAGCCGAACAGTTCAATAGCGTGCTAGTTGGTGTTCGTAAGCTTCCAGTGATGGCCATAGTATCATTTACGTTCATGAAGTGCAATGACTACTTTGTGAACAGACATGATGAAGCTTTGAAGTGTTTCGATAAGCAGAAAAAGACATACGAGGTCACAGAGAGGGGTGGTATAACACGTGGTGGTGTTAGATTCGGCGCAAGAGCCTTCAAAGTTGAAGGTGAGGGGAACTCATGTTCTTGCCAAAGGCCATTGCTCTACCATATGCCTTGCTCACATCTTATACACGTTTATCTGATTCATGCAATTGATGAGGAATCTCCCAACCGAATGCCGTATCAGTTCTCTTCAAGAGCCGTTGTGAACACATGGGCAAGTCGCTTTGAGCCATACCTCGACCCCACACAGTGGCCACCGTACGATGGTGAAGAATTTGTTGCTGACCTAAAGTTGAAGATTAAAACAAGAGGGAAGAGGAGATCGAAACGATTCAAGAACGAAATGGACTCGGGTCTGGGTGGTTCTGGAAGGAAACCACCTTCATGCGTTCAACTTGATGCTGCGCCGGTGCAAAATAGATGCTCATTGTGTCACCAGGAGGGTCACAAGAAAACTAAGTGTCCTAAGCGTCCAAAAAAGAAGAAGATGGCCGAGGAGAGACAACCGCCGACTTACCCAGCCTTGGAGGCGTACTACGAGGCCCGTTATCGCGGGGCTGCGATCGAGGCAGGGAGGGTACTTCAACCGCTCCGAGTCAGAGCTCATGCTCCCCCAGTGTTTGACGATAGGTACATCCCGTACCTAAGGACGGAAGGCCTAAGTGGAGGCAAAGCTTCACTCCTTGGCCCTACAATGAGCCAAACATGGAGAAGACAGTGGCCTACCTTTTTGAGAATACTGCCACTGCACATGCTCACCAGGATGTGGCATACAAGCATTATGTCAATGAGATGGACTGCTTACAGCCTTAACATGTATGACAGGGTGAGAACAAAGAAGGTGAAAGACTGGGGGCTAGAGCATAATAGATACATTGATGAATGGAGGACAGCCGGAAGGAACGACAGGACATATAGACTGTTCCTCCGCCCTACTTGGACGGAAGCCGACATAGAGGATGACCGCGACTCCGATGAGGGACGGAATCCCTATGATGTCCGGACTAGAGTTGGATATCAAATGGAGCACGCCCCGCTTAGAGACAGAGTCTCGAGAGAGCTCCTCAGGAGTGTGAATGAAATGGGCCATGCCCTCCAAGCTCCGAGGGGTGGTGAGGACACGGAGAATACACTCCGCAATGTTTTAGAGAAAGTTCGTCAAAGGTGCCGGAAACTTGCAGCAAGATTAGGTTGCAAGTCAGTTGGATTGGACGACATGTACCAACCGCGGAGACTACCACCACCACTACCTCACTCCGTGCGTCCAAGTACCGCTCGACACTCCATCAGGATAGAAGAGCGTGAAGAAGTTGGTGGCTCGTCGTCGTCACGCATTCCGCAAGGGAGGGGAAAGGGGAAGGCGCCGGCTCCACCTAGCGACGACGATGACGACGACGACGAGGAGGATGAGGACTACGTCGCACCAGACGCTGAGGAGATAGACATGTCGCAGCTTCCCGACGCGCCTCAGAGGACGCAACCCACGCAATACAACTTGCGATCCACTCGGGCAGCGAAAAAGAGGGAGGCAGAGGGCGGCGCCAACCACCCTGGCGCCGCGGTTGGGGAGGGCGGCGCCAGCCAGTGCCGTGAGGCAGAAGGGTTTCGGGCTGGCGGGAGGGCGGTGCCAACTACCCTGGCACCGTGGTCCATGAGGGCGGCGCCAGCCGAGGCCCGGAGGCAGAAGGGCTTCGATGGGGGGAGGAGGGGGGCACCAGCCACCCTGGCGCCGCGGTCTGGGGGGGCGCCAGCCGTTGCCCGGAGGCAGAAGCGAAAATTTTGA
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| Protein seq | MDGGSGSSACLIVLFDGGGANAVVHELRLESFGGDGRCQCYASRSAPYIQIHLHVRTRCSHPYMHALLEQMDRLVRVYYGGRVVEPYVGAHVEFEDMSLKTILFPTHPTLDELRSRVKEVLGWTEDNVEIRFYGRYDVGQGHKYILNVIGGASKTELVREDLEGEGEKKRPLLGNDLWEAGPSKRHCGSDDVDVAREMKRELVQEGLDLSEHLSASVHWSSYGVNPEYPTEVAGQYVNPDDYFDVELSGGHDSVSVEVNRDDVDEEASVEQYDVEFAEDSDNDRPFPPLTNNDKLALEECRAFEKVFGRKPDIPEFRDLTHAHGALLDGGINLDQLPELFRLQDYAIVHHRPYRVVNSAANRRYTVKCENPRCKWKVHATKRSIGTWRISRVGKEHSCATAEGSGSHQQLTSKFIANRLCNAIKLQPTLFASALALYIFEVFQYRVKYGKAWKAREEAMKLIYSEWGEAYVRLPTLLQAIKQRNPSMVYHIDTHPDRVVNVDGVTKKIFMRAFWCFGPSIEAFKHCRPVLTIDATFLTGKYSGALMTALSADAEDQLVPLAFALVEKENSRDWCWFIDLVRRVVVGPHREVCIISDRHAGIMNAMTTPVSGLPPVHHRWCMRHFSANFHKAGADKHQTKELLRICQIDEKWIFERDVEALRQRIPEGPRKRLEDELLDKDKWSRAYDRNGRRWGYMTTNIAEQFNSVLVGVRKLPVMAIVSFTFMKCNDYFVNRHDEALKCFDKQKKTYEVTERGGITRGGVRFGARAFKVEGEGNSCSCQRPLLYHMPCSHLIHVYLIHAIDEESPNRMPYQFSSRAVVNTWASRFEPYLDPTQWPPYDGEEFVADLKLKIKTRGKRRSKRFKNEMDSGLGGSGRKPPSCVQLDAAPVQNRCSLCHQEGHKKTKCPKRPKKKKMAEERQPPTYPALEAYYEARYRGAAIEAGRVLQPLRVRAHAPPVFDDRYIPYLRTEGLSGGKASLLGPTMSQTWRRQWPTFLRILPLHMLTRMWHTSIMSMRWTAYSLNMYDRVRTKKVKDWGLEHNRYIDEWRTAGRNDRTYRLFLRPTWTEADIEDDRDSDEGRNPYDVRTRVGYQMEHAPLRDRVSRELLRSVNEMGHALQAPRGGEDTENTLRNVLEKVRQRCRKLAARLGCKSVGLDDMYQPRRLPPPLPHSVRPSTARHSIRIEEREEVGGSSSSRIPQGRGKGKAPAPPSDDDDDDDEEDEDYVAPDAEEIDMSQLPDAPQRTQPTQYNLRSTRAAKKREAEGGANHPGAAVGEGGASQCREAEGFRAGGRAVPTTLAPWSMRAAPAEARRQKGFDGGRRGAPATLAPRSGGAPAVARRQKRKF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0167800 | RBH | 0.0 | 0.152897 | 0.939058 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g04480 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0167800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0004910 | RBH | 0.0 | 0.0 | 0.911218 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0004610 | RBH | 0.0 | 0.0 | 0.754375 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0004850 | SBH | 0.000000 | 0.0 | 2.809726 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0004520 | RBH | 0.0 | 0.296347 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0004740 | SBH | 0.0 | 1.635761 | 3.696936 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0033500 | SBH | 0 | 0.0449155 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0004670 | RBH | 0.0 | 0.000000 | 0.235308 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0024800 | RBH | 0 | 0.0219425 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0004680 | RBH | 0.0 | 3.532674 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0004740 | RBH | 0.0 | 9.072193 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0004700 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0004670 | RBH | 0.0 | 6.973186 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G004740 | RBH | 0.0 | 1.277913 | 0.509832 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0004620 | SBH | 1.399844 | 7.124602 | 0.552289 |
