Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os01g05980		OGI:01008970 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr01:2851954-2855225		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		-
DNA seq		ATGAGGCTTCTTGTATTACTGTCCCTCATCTCCGTCCTGACGATCGCCGGTGGCAGCACCGATGAGGCCACGCTGCCCGCTTTCAAGGCGGGGCTCAGCTCAAGGACGCTCACCTCATGGAACAGCAGCACCAGCTTCTGCAACTGGGAGGGCGTCAAGTGCAGCCGCCATAGGCCGACGAGGGTGGTGGGGCTGAGCCTGCCGTCCAGTAATCTCGCCGGAACGCTCCCTCCTGCCATCGGAAACCTCACCTTCCTCCGGTGGTTCAACCTGAGCTCCAATGGGCTCCACGGGGAGATTCCCCCAAGCCTCGGCCACCTCCAGCATCTACGGATCCTCGACCTTGGAAGCAATTCGTTTTCCGGTGCGTTCCCTGATAATCTGAGCTCCTGCATCAGCTTGATAAACCTGACCCTGGGCTATAACCAACTTAGTGGCCACATTCCGGTGAAGTTGGGTAACACACTGACGTGGCTCCAGAAGCTCCATCTTGGAAACAACAGCTTCACAGGGCCGATTCCAGCCTCGCTAGCAAACCTATCATCGCTTGAGTTCCTAAAGTTGGACTTCAACCACCTGAAAGGCCTGATCCCGTCAAGCCTCGGAAACATCCCAAATCTGCAGAAGATTGGTCTTGACGGAAACAGCCTCTCTGGCGAATTCCCGCCCTCCATATGGAATCTGTCAAAACTGACTGTTCTCCAAGTATATGAGAACAAGCTCAAAGGAAGCATTCCCGCCAACATTGGCGACAAATTACCTAACATGCAACACTTTGTTCTGTCTGTGAACCAGTTTAGCGGAGTCATCCCCTCTTCCTTATTCAATCTATCATCACTCACAGACGTATACCTTGATGGTAACAAATTCAGTGGATTTGTGCCTCCTACCGTGGGAAGGTTGAAATCTCTTGTGCGTCTATCCTTGTCTAGCAACCGACTTGAGGCAAATAACATGAAGGGCTGGGAATTTATAACTTCACTTGCCAACTGCAGTCAGCTGCAACAGCTAGATATCGCAGAAAATTCTTTCATTGGGCAGCTGCCAATCTCTATTGTTAACCTGTCGACAACACTTCAAAAGTTCTTCTTACGTGGTAATAGCGTCTCCGGGAGCATCCCCACAGACATTGGCAATTTGATTGGCTTGGACACGCTCGATCTAGGGTCCACTTCTTTGTCAGGAGTGATTCCTGAGAGCATAGGGAAGCTAGCAGACTTGGCCATAATTACTCTGTACAGCACTAGATTGTCAGGCCTCATACCGTCAGTAATTGGAAATCTTACCAATTTGAATATACTAGCCGCATACGATGCCCATTTGGAAGGCCCAATACCTGCAACCCTTGGGAAGCTAAAGAAGCTATTTGCTCTAGATTTGTCCATAAACCATCTGAACGGTTCGGTCCCAAAAGAAATTTTTGAGCTGCCGTCACTTTCTTGGTTCTTAATCTTGTCAGATAATACTCTCTCAGGACCCATTCCATCAGAAGTTGGTACCTTGGTTAACCTAAACAGTATAGAACTGTCAGGAAACCAGCTATCTGATCAAATACCTGACAGTATAGGAAATTGTGAGGTGCTGGAATACCTGCTGCTAGATAGCAACTCGTTTGAAGGAAGCATACCTCAATCTTTGACAAAACTAAAAGGGATCGCCATACTGAACCTAACCATGAACAAGTTTTCTGGTAGCATCCCCAATGCCATTGGTAGCATGGGCAATCTGCAACAGCTGTGTCTAGCTCACAACAATTTGTCAGGATCAATCCCAGAAACCCTACAAAATTTGACACAGCTGTGGCACTTAGATGTGTCCTTCAATAATTTGCAAGGCAAAGTACCAGATGAAGGTGCTTTCAGGAACCTTACGTATGCATCAGTTGCAGGGAACGACAAGTTGTGTGGTGGAATACCTCGGCTTCACTTGGCTCCATGTCCAATTCCTGCTGTAAGAAAGGACAGAAAAGAACGGATGAAATATCTTAAAGTAGCTTTCATAACAACAGGAGCAATTCTGGTGTTAGCTTCAGCTATTGTTCTGATTATGTTACAGCACAGGAAACTAAAAGGAAGACAAAATAGCCAAGAGATATCTCCGGTTATAGAGGAACAATATCAGAGGATTTCATATTATGCATTATCAAGAGGAAGCAATGAATTTTCAGAAGCAAACTTGCTTGGCAAAGGAAGATATGGTTCTGTTTATAAATGCACTTTACAAGATGAGGGTGAACCTGTAGCCATAAAAGTGTTCGACCTTAAACAATTAGGATCTTCAAGGAGCTTTCAGGCTGAATGTGAGGCTTTGAGAAGAGTTCGCCATCGTTGTCTGACAAAGATCATCACTTGTTGTTCAAGTATTGACCCACAGGGTCAGGAGTTCAAGGCATTAGTTTTTGAGTACATGCCCAACGGAAGCTTAGATAGTTGGCTCCATCCCACGTCAAGCAATCCCACTCCCAGCAATACACTGAGCCTTTCGCAGAGACTCAGCATTGTGGTTGATATCTTGGACGCACTGGATTATCTTCACAACAGTTGTCAGCCACCGATCATTCATTGTGACCTGAAACCAAGTAATATTCTTCTTGCAGAAGACATGAGTGCAAAGGTTGGAGATTTTGGCATATCAAAAATCCTCCCCAAAAGCACAACTAGAACTCTTCAATATTCAAAAAGCTCAATTGGAATCCGAGGTTCCATTGGATATATTGCACCAGGTAGGTCAAAAATATTATATTTTTGTATTATATCCTACAATTTCTCCACCTCCTCCCTCATGGGTGGGGGTTGGACTGGAACTTTGTATCTTTTACATGTCGGTAGTACGGTGAAAAACTAACTTTAACTGCAAATATTGTAGAGTATGGAGAAGGTTCTGCAGTAACCAGAGCAGGTGATACTTACAGCTTAGGTATATTGTTGCTTGAGATGTTTAATGGAAGAAGTCCCACTGATGACATTTTCAGGGATTCAATGGATCTGCACAAGTTTGTTGCAGCTTCTTTTCTTGAGAGCGCCATGAACATAGCTGATCGAACAATCTGGCTGCATGAAGAAGCAAATGATACAGATGGGACAAATGCAAGCACAAAAAGAAGAATTATTCAACAGTGTTTGGTGTCCGTTCTTAGGCTCGGCTTATCCTGCTCAAAGCAACAACCCAGAGACCGAATGCTGTTACCAGATGCTGCATCAGAGATTCATGCAATCAGAGATGAATATCTCAGGTCTTGGATGGTTGAAAATGAACAGAGCACTCTTAACTAA More
CDS seq		ATGAGGCTTCTTGTATTACTGTCCCTCATCTCCGTCCTGACGATCGCCGGTGGCAGCACCGATGAGGCCACGCTGCCCGCTTTCAAGGCGGGGCTCAGCTCAAGGACGCTCACCTCATGGAACAGCAGCACCAGCTTCTGCAACTGGGAGGGCGTCAAGTGCAGCCGCCATAGGCCGACGAGGGTGGTGGGGCTGAGCCTGCCGTCCAGTAATCTCGCCGGAACGCTCCCTCCTGCCATCGGAAACCTCACCTTCCTCCGGTGGTTCAACCTGAGCTCCAATGGGCTCCACGGGGAGATTCCCCCAAGCCTCGGCCACCTCCAGCATCTACGGATCCTCGACCTTGGAAGCAATTCGTTTTCCGGTGCGTTCCCTGATAATCTGAGCTCCTGCATCAGCTTGATAAACCTGACCCTGGGCTATAACCAACTTAGTGGCCACATTCCGGTGAAGTTGGGTAACACACTGACGTGGCTCCAGAAGCTCCATCTTGGAAACAACAGCTTCACAGGGCCGATTCCAGCCTCGCTAGCAAACCTATCATCGCTTGAGTTCCTAAAGTTGGACTTCAACCACCTGAAAGGCCTGATCCCGTCAAGCCTCGGAAACATCCCAAATCTGCAGAAGATTGGTCTTGACGGAAACAGCCTCTCTGGCGAATTCCCGCCCTCCATATGGAATCTGTCAAAACTGACTGTTCTCCAAGTATATGAGAACAAGCTCAAAGGAAGCATTCCCGCCAACATTGGCGACAAATTACCTAACATGCAACACTTTGTTCTGTCTGTGAACCAGTTTAGCGGAGTCATCCCCTCTTCCTTATTCAATCTATCATCACTCACAGACGTATACCTTGATGGTAACAAATTCAGTGGATTTGTGCCTCCTACCGTGGGAAGGTTGAAATCTCTTGTGCGTCTATCCTTGTCTAGCAACCGACTTGAGGCAAATAACATGAAGGGCTGGGAATTTATAACTTCACTTGCCAACTGCAGTCAGCTGCAACAGCTAGATATCGCAGAAAATTCTTTCATTGGGCAGCTGCCAATCTCTATTGTTAACCTGTCGACAACACTTCAAAAGTTCTTCTTACGTGGTAATAGCGTCTCCGGGAGCATCCCCACAGACATTGGCAATTTGATTGGCTTGGACACGCTCGATCTAGGGTCCACTTCTTTGTCAGGAGTGATTCCTGAGAGCATAGGGAAGCTAGCAGACTTGGCCATAATTACTCTGTACAGCACTAGATTGTCAGGCCTCATACCGTCAGTAATTGGAAATCTTACCAATTTGAATATACTAGCCGCATACGATGCCCATTTGGAAGGCCCAATACCTGCAACCCTTGGGAAGCTAAAGAAGCTATTTGCTCTAGATTTGTCCATAAACCATCTGAACGGTTCGGTCCCAAAAGAAATTTTTGAGCTGCCGTCACTTTCTTGGTTCTTAATCTTGTCAGATAATACTCTCTCAGGACCCATTCCATCAGAAGTTGGTACCTTGGTTAACCTAAACAGTATAGAACTGTCAGGAAACCAGCTATCTGATCAAATACCTGACAGTATAGGAAATTGTGAGGTGCTGGAATACCTGCTGCTAGATAGCAACTCGTTTGAAGGAAGCATACCTCAATCTTTGACAAAACTAAAAGGGATCGCCATACTGAACCTAACCATGAACAAGTTTTCTGGTAGCATCCCCAATGCCATTGGTAGCATGGGCAATCTGCAACAGCTGTGTCTAGCTCACAACAATTTGTCAGGATCAATCCCAGAAACCCTACAAAATTTGACACAGCTGTGGCACTTAGATGTGTCCTTCAATAATTTGCAAGGCAAAGTACCAGATGAAGGTGCTTTCAGGAACCTTACGTATGCATCAGTTGCAGGGAACGACAAGTTGTGTGGTGGAATACCTCGGCTTCACTTGGCTCCATGTCCAATTCCTGCTGTAAGAAAGGACAGAAAAGAACGGATGAAATATCTTAAAGTAGCTTTCATAACAACAGGAGCAATTCTGGTGTTAGCTTCAGCTATTGTTCTGATTATGTTACAGCACAGGAAACTAAAAGGAAGACAAAATAGCCAAGAGATATCTCCGGTTATAGAGGAACAATATCAGAGGATTTCATATTATGCATTATCAAGAGGAAGCAATGAATTTTCAGAAGCAAACTTGCTTGGCAAAGGAAGATATGGTTCTGTTTATAAATGCACTTTACAAGATGAGGGTGAACCTGTAGCCATAAAAGTGTTCGACCTTAAACAATTAGGATCTTCAAGGAGCTTTCAGGCTGAATGTGAGGCTTTGAGAAGAGTTCGCCATCGTTGTCTGACAAAGATCATCACTTGTTGTTCAAGTATTGACCCACAGGGTCAGGAGTTCAAGGCATTAGTTTTTGAGTACATGCCCAACGGAAGCTTAGATAGTTGGCTCCATCCCACGTCAAGCAATCCCACTCCCAGCAATACACTGAGCCTTTCGCAGAGACTCAGCATTGTGGTTGATATCTTGGACGCACTGGATTATCTTCACAACAGTTGTCAGCCACCGATCATTCATTGTGACCTGAAACCAAGTAATATTCTTCTTGCAGAAGACATGAGTGCAAAGGTTGGAGATTTTGGCATATCAAAAATCCTCCCCAAAAGCACAACTAGAACTCTTCAATATTCAAAAAGCTCAATTGGAATCCGAGGTTCCATTGGATATATTGCACCAGAGTATGGAGAAGGTTCTGCAGTAACCAGAGCAGGTGATACTTACAGCTTAGGTATATTGTTGCTTGAGATGTTTAATGGAAGAAGTCCCACTGATGACATTTTCAGGGATTCAATGGATCTGCACAAGTTTGTTGCAGCTTCTTTTCTTGAGAGCGCCATGAACATAGCTGATCGAACAATCTGGCTGCATGAAGAAGCAAATGATACAGATGGGACAAATGCAAGCACAAAAAGAAGAATTATTCAACAGTGTTTGGTGTCCGTTCTTAGGCTCGGCTTATCCTGCTCAAAGCAACAACCCAGAGACCGAATGCTGTTACCAGATGCTGCATCAGAGATTCATGCAATCAGAGATGAATATCTCAGGTCTTGGATGGTTGAAAATGAACAGAGCACTCTTAACTAA More
Protein seq		MRLLVLLSLISVLTIAGGSTDEATLPAFKAGLSSRTLTSWNSSTSFCNWEGVKCSRHRPTRVVGLSLPSSNLAGTLPPAIGNLTFLRWFNLSSNGLHGEIPPSLGHLQHLRILDLGSNSFSGAFPDNLSSCISLINLTLGYNQLSGHIPVKLGNTLTWLQKLHLGNNSFTGPIPASLANLSSLEFLKLDFNHLKGLIPSSLGNIPNLQKIGLDGNSLSGEFPPSIWNLSKLTVLQVYENKLKGSIPANIGDKLPNMQHFVLSVNQFSGVIPSSLFNLSSLTDVYLDGNKFSGFVPPTVGRLKSLVRLSLSSNRLEANNMKGWEFITSLANCSQLQQLDIAENSFIGQLPISIVNLSTTLQKFFLRGNSVSGSIPTDIGNLIGLDTLDLGSTSLSGVIPESIGKLADLAIITLYSTRLSGLIPSVIGNLTNLNILAAYDAHLEGPIPATLGKLKKLFALDLSINHLNGSVPKEIFELPSLSWFLILSDNTLSGPIPSEVGTLVNLNSIELSGNQLSDQIPDSIGNCEVLEYLLLDSNSFEGSIPQSLTKLKGIAILNLTMNKFSGSIPNAIGSMGNLQQLCLAHNNLSGSIPETLQNLTQLWHLDVSFNNLQGKVPDEGAFRNLTYASVAGNDKLCGGIPRLHLAPCPIPAVRKDRKERMKYLKVAFITTGAILVLASAIVLIMLQHRKLKGRQNSQEISPVIEEQYQRISYYALSRGSNEFSEANLLGKGRYGSVYKCTLQDEGEPVAIKVFDLKQLGSSRSFQAECEALRRVRHRCLTKIITCCSSIDPQGQEFKALVFEYMPNGSLDSWLHPTSSNPTPSNTLSLSQRLSIVVDILDALDYLHNSCQPPIIHCDLKPSNILLAEDMSAKVGDFGISKILPKSTTRTLQYSKSSIGIRGSIGYIAPEYGEGSAVTRAGDTYSLGILLLEMFNGRSPTDDIFRDSMDLHKFVAASFLESAMNIADRTIWLHEEANDTDGTNASTKRRIIQQCLVSVLRLGLSCSKQQPRDRMLLPDAASEIHAIRDEYLRSWMVENEQSTLN
Function		Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os01g05980	LOC_Os01g05980.1	Chr01	2851954	2855225	+	MSU_osa1r7
CDS seq	ATGAGGCTTCTTGTATTACTGTCCCTCATCTCCGTCCTGACGATCGCCGGTGGCAGCACCGATGAGGCCACGCTGCCCGCTTTCAAGGCGGGGCTCAGCTCAAGGACGCTCACCTCATGGAACAGCAGCACCAGCTTCTGCAACTGGGAGGGCGTCAAGTGCAGCCGCCATAGGCCGACGAGGGTGGTGGGGCTGAGCCTGCCGTCCAGTAATCTCGCCGGAACGCTCCCTCCTGCCATCGGAAACCTCACCTTCCTCCGGTGGTTCAACCTGAGCTCCAATGGGCTCCACGGGGAGATTCCCCCAAGCCTCGGCCACCTCCAGCATCTACGGATCCTCGACCTTGGAAGCAATTCGTTTTCCGGTGCGTTCCCTGATAATCTGAGCTCCTGCATCAGCTTGATAAACCTGACCCTGGGCTATAACCAACTTAGTGGCCACATTCCGGTGAAGTTGGGTAACACACTGACGTGGCTCCAGAAGCTCCATCTTGGAAACAACAGCTTCACAGGGCCGATTCCAGCCTCGCTAGCAAACCTATCATCGCTTGAGTTCCTAAAGTTGGACTTCAACCACCTGAAAGGCCTGATCCCGTCAAGCCTCGGAAACATCCCAAATCTGCAGAAGATTGGTCTTGACGGAAACAGCCTCTCTGGCGAATTCCCGCCCTCCATATGGAATCTGTCAAAACTGACTGTTCTCCAAGTATATGAGAACAAGCTCAAAGGAAGCATTCCCGCCAACATTGGCGACAAATTACCTAACATGCAACACTTTGTTCTGTCTGTGAACCAGTTTAGCGGAGTCATCCCCTCTTCCTTATTCAATCTATCATCACTCACAGACGTATACCTTGATGGTAACAAATTCAGTGGATTTGTGCCTCCTACCGTGGGAAGGTTGAAATCTCTTGTGCGTCTATCCTTGTCTAGCAACCGACTTGAGGCAAATAACATGAAGGGCTGGGAATTTATAACTTCACTTGCCAACTGCAGTCAGCTGCAACAGCTAGATATCGCAGAAAATTCTTTCATTGGGCAGCTGCCAATCTCTATTGTTAACCTGTCGACAACACTTCAAAAGTTCTTCTTACGTGGTAATAGCGTCTCCGGGAGCATCCCCACAGACATTGGCAATTTGATTGGCTTGGACACGCTCGATCTAGGGTCCACTTCTTTGTCAGGAGTGATTCCTGAGAGCATAGGGAAGCTAGCAGACTTGGCCATAATTACTCTGTACAGCACTAGATTGTCAGGCCTCATACCGTCAGTAATTGGAAATCTTACCAATTTGAATATACTAGCCGCATACGATGCCCATTTGGAAGGCCCAATACCTGCAACCCTTGGGAAGCTAAAGAAGCTATTTGCTCTAGATTTGTCCATAAACCATCTGAACGGTTCGGTCCCAAAAGAAATTTTTGAGCTGCCGTCACTTTCTTGGTTCTTAATCTTGTCAGATAATACTCTCTCAGGACCCATTCCATCAGAAGTTGGTACCTTGGTTAACCTAAACAGTATAGAACTGTCAGGAAACCAGCTATCTGATCAAATACCTGACAGTATAGGAAATTGTGAGGTGCTGGAATACCTGCTGCTAGATAGCAACTCGTTTGAAGGAAGCATACCTCAATCTTTGACAAAACTAAAAGGGATCGCCATACTGAACCTAACCATGAACAAGTTTTCTGGTAGCATCCCCAATGCCATTGGTAGCATGGGCAATCTGCAACAGCTGTGTCTAGCTCACAACAATTTGTCAGGATCAATCCCAGAAACCCTACAAAATTTGACACAGCTGTGGCACTTAGATGTGTCCTTCAATAATTTGCAAGGCAAAGTACCAGATGAAGGTGCTTTCAGGAACCTTACGTATGCATCAGTTGCAGGGAACGACAAGTTGTGTGGTGGAATACCTCGGCTTCACTTGGCTCCATGTCCAATTCCTGCTGTAAGAAAGGACAGAAAAGAACGGATGAAATATCTTAAAGTAGCTTTCATAACAACAGGAGCAATTCTGGTGTTAGCTTCAGCTATTGTTCTGATTATGTTACAGCACAGGAAACTAAAAGGAAGACAAAATAGCCAAGAGATATCTCCGGTTATAGAGGAACAATATCAGAGGATTTCATATTATGCATTATCAAGAGGAAGCAATGAATTTTCAGAAGCAAACTTGCTTGGCAAAGGAAGATATGGTTCTGTTTATAAATGCACTTTACAAGATGAGGGTGAACCTGTAGCCATAAAAGTGTTCGACCTTAAACAATTAGGATCTTCAAGGAGCTTTCAGGCTGAATGTGAGGCTTTGAGAAGAGTTCGCCATCGTTGTCTGACAAAGATCATCACTTGTTGTTCAAGTATTGACCCACAGGGTCAGGAGTTCAAGGCATTAGTTTTTGAGTACATGCCCAACGGAAGCTTAGATAGTTGGCTCCATCCCACGTCAAGCAATCCCACTCCCAGCAATACACTGAGCCTTTCGCAGAGACTCAGCATTGTGGTTGATATCTTGGACGCACTGGATTATCTTCACAACAGTTGTCAGCCACCGATCATTCATTGTGACCTGAAACCAAGTAATATTCTTCTTGCAGAAGACATGAGTGCAAAGGTTGGAGATTTTGGCATATCAAAAATCCTCCCCAAAAGCACAACTAGAACTCTTCAATATTCAAAAAGCTCAATTGGAATCCGAGGTTCCATTGGATATATTGCACCAGAGTATGGAGAAGGTTCTGCAGTAACCAGAGCAGGTGATACTTACAGCTTAGGTATATTGTTGCTTGAGATGTTTAATGGAAGAAGTCCCACTGATGACATTTTCAGGGATTCAATGGATCTGCACAAGTTTGTTGCAGCTTCTTTTCTTGAGAGCGCCATGAACATAGCTGATCGAACAATCTGGCTGCATGAAGAAGCAAATGATACAGATGGGACAAATGCAAGCACAAAAAGAAGAATTATTCAACAGTGTTTGGTGTCCGTTCTTAGGCTCGGCTTATCCTGCTCAAAGCAACAACCCAGAGACCGAATGCTGTTACCAGATGCTGCATCAGAGATTCATGCAATCAGAGATGAATATCTCAGGTCTTGGATGGTTGAAAATGAACAGAGCACTCTTAACTAA More
Protein seq	MRLLVLLSLISVLTIAGGSTDEATLPAFKAGLSSRTLTSWNSSTSFCNWEGVKCSRHRPTRVVGLSLPSSNLAGTLPPAIGNLTFLRWFNLSSNGLHGEIPPSLGHLQHLRILDLGSNSFSGAFPDNLSSCISLINLTLGYNQLSGHIPVKLGNTLTWLQKLHLGNNSFTGPIPASLANLSSLEFLKLDFNHLKGLIPSSLGNIPNLQKIGLDGNSLSGEFPPSIWNLSKLTVLQVYENKLKGSIPANIGDKLPNMQHFVLSVNQFSGVIPSSLFNLSSLTDVYLDGNKFSGFVPPTVGRLKSLVRLSLSSNRLEANNMKGWEFITSLANCSQLQQLDIAENSFIGQLPISIVNLSTTLQKFFLRGNSVSGSIPTDIGNLIGLDTLDLGSTSLSGVIPESIGKLADLAIITLYSTRLSGLIPSVIGNLTNLNILAAYDAHLEGPIPATLGKLKKLFALDLSINHLNGSVPKEIFELPSLSWFLILSDNTLSGPIPSEVGTLVNLNSIELSGNQLSDQIPDSIGNCEVLEYLLLDSNSFEGSIPQSLTKLKGIAILNLTMNKFSGSIPNAIGSMGNLQQLCLAHNNLSGSIPETLQNLTQLWHLDVSFNNLQGKVPDEGAFRNLTYASVAGNDKLCGGIPRLHLAPCPIPAVRKDRKERMKYLKVAFITTGAILVLASAIVLIMLQHRKLKGRQNSQEISPVIEEQYQRISYYALSRGSNEFSEANLLGKGRYGSVYKCTLQDEGEPVAIKVFDLKQLGSSRSFQAECEALRRVRHRCLTKIITCCSSIDPQGQEFKALVFEYMPNGSLDSWLHPTSSNPTPSNTLSLSQRLSIVVDILDALDYLHNSCQPPIIHCDLKPSNILLAEDMSAKVGDFGISKILPKSTTRTLQYSKSSIGIRGSIGYIAPEYGEGSAVTRAGDTYSLGILLLEMFNGRSPTDDIFRDSMDLHKFVAASFLESAMNIADRTIWLHEEANDTDGTNASTKRRIIQQCLVSVLRLGLSCSKQQPRDRMLLPDAASEIHAIRDEYLRSWMVENEQSTLN More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.000000	0.000000	0.000000

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0153000	RBH	0.0	0.0	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g05960	RBH	0.191725	0.343508	0.343391
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0153000	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0003890	RBH	0.074925	0.288941	0.370606
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0003670	RBH	0.054343	0.0	0.665891
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0003880	SBH	0.157822	0.000000	0.613723
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0003510	RBH	0.0	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0003740	RBH	0.467128	0.0	1.004142
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0049100	RBH	0.6343385	1.8059665	1.520102
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0003700	RBH	0.061393	0.000000	0.256636
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0050200	RBH	0.798937	3.1670835	3.609677
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0003490	SBH	0.031351	0.016273	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0003620	SBH	0.032768	0.332644	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0003780	RBH	0.0	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0003750	RBH	0.000000	0.0	0.271184
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0003670	SBH	0.013014	0.152850	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G003750	RBH	0.0	0.0	0.0
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0003620	RBH	0.545474	0.0	0.000000

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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