Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Lemont_MH63RS3_INS1125070

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-trp: Lemont | Lemont

Os XI-adm: Minghui 63 | MH63RS3

Chr11

12287435

SV Length:

Query Start:

Query End:

Allele sv Count:

333 bp

13398919

13399251

32

Gene_id	Chromosome	Start	End
OsMH63_11G0186200	Chr11	13396612	13403197

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Lemont_117534_INS1120990	Chr11	12287435	12287435	12715081	12715413	333
Lemont_125619_INS1123020	Chr11	12287435	12287435	12682497	12682165	333
Lemont_125827_INS1122660	Chr11	12287435	12287435	13688045	13688377	333
Lemont_127564_INS1123680	Chr11	12287435	12287435	12542506	12542174	333
Lemont_127652_INS1127670	Chr11	12287435	12287435	12514874	12514542	333
Lemont_127742_INS1124460	Chr11	12287435	12287435	13367349	13367681	333
Lemont_132424_INS1123940	Chr11	12287435	12287435	12599577	12599245	333
Lemont_CN1_INS1124550	Chr11	12287435	12287435	14184371	14184703	333
Lemont_DG_INS1124370	Chr11	12287435	12287435	14771557	14771889	333
Lemont_FH838_INS1125520	Chr11	12287435	12287435	14374408	14374740	333
Lemont_G46_INS1124620	Chr11	12287435	12287435	13222795	13223127	333
Lemont_G630_INS1124190	Chr11	12287435	12287435	13625735	13626067	333
Lemont_G8_INS1123780	Chr11	12287435	12287435	12706738	12707070	333
Lemont_HZ_INS1125130	Chr11	12287435	12287435	13135737	13135405	333
Lemont_II32_INS1124680	Chr11	12287435	12287435	14243828	14243496	333
Lemont_IR64_INS1123580	Chr11	12287435	12287435	12715272	12715604	333
Lemont_J4155_INS1122080	Chr11	12287435	12287435	12499255	12498923	333
Lemont_J4155S_INS1124190	Chr11	12287435	12287435	13149976	13149644	333
Lemont_LK638S_INS1124350	Chr11	12287435	12287435	13182026	13181694	333
Lemont_R498_INS1122860	Chr11	12287435	12287435	13118906	13119238	333
Lemont_R527_INS1124550	Chr11	12287435	12287435	13414146	13414478	333
Lemont_R9311_INS1125270	Chr11	12287435	12287435	13297371	13297703	333
Lemont_S548_INS1124110	Chr11	12287435	12287435	13320119	13320451	333
Lemont_TM_INS1123910	Chr11	12287435	12287435	14098499	14098831	333
Lemont_Tumba_INS1123620	Chr11	12287435	12287435	13151286	13151618	333
Lemont_WSSM_INS1125010	Chr11	12287435	12287435	12924095	12924427	333
Lemont_XL628S_INS1124220	Chr11	12287435	12287435	13176114	13175782	333
Lemont_Y3551_INS1122730	Chr11	12287435	12287435	12995459	12995127	333
Lemont_Y58S_INS1116950	Chr11	12287435	12287435	13881967	13881635	333
Lemont_YX1_INS1124130	Chr11	12287435	12287435	12888813	12889145	333
Lemont_ZS97RS3_INS1124720	Chr11	12287435	12287435	13282788	13282456	333
Lemont_MH63RS3_INS1125070	Chr11	12287435	12287435	13398919	13399251	333

>Lemont_MH63RS3_INS1125070
TTTGTAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTAATAGCAGTTATGCTTCTCAAAATCATTTTTTGTACTTCTTTTTCTCTGTTGTAGCATGATCTTTCAGATTGCCCTACATAATGTTTATTTTTTATACCTATAGCCATATTGATTACTTCAGATTTGACATGGAAAAATGTGAAATATTTAAAAGAACTCAGATTCAGTCAGAACTATTGTGTAAGCATGCATAGAAAGCTACCCTAAATAGACTTGATGCCCATTTGTCAAGTACAGCCTACATGTGAAGTAATCTAATACAAGCAGTT