Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0186200 | OGI:01044490 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr11:13396613-13403197 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INS1142830,02428_MH63RS3_INS1122230,02428_MH63RS3_DEL1122240,Basmati1_MH63RS3_INS1122520,Basmati1_MH63RS3_DEL1122510,Basmati1_MH63RS3_INV1120490,Y58S_MH63RS3_INV1115260,Lemont_MH63RS3_INS1125070,Lemont_MH63RS3_DEL1125080,128077_MH63RS3_INS1122890,128077_MH63RS3_DEL1122900,127652_MH63RS3_INV1124580,Y3551_MH63RS3_INV1102810_1,ZH11_MH63RS3_INS1121920,ZH11_MH63RS3_DEL1121930,DHX2_MH63RS3_INS1120490,DHX2_MH63RS3_DEL1120500,127518_MH63RS3_INS1131680,KY131_MH63RS3_INS1140490,XL628S_MH63RS3_INV1123120,HZ_MH63RS3_INV1121080,125619_MH63RS3_INV1117220_1,Kosh_MH63RS3_INS1136600,132424_MH63RS3_INV1116240,LK638S_MH63RS3_INV1122080_2,TM_MH63RS3_DEL1120520,TM_MH63RS3_DEL1120700,TM_MH63RS3_OTH1120550,127564_MH63RS3_INV1114390,J4155S_MH63RS3_INV1119090,ZS97RS3_MH63RS3_INV1121870,132278_MH63RS3_INS1123650,132278_MH63RS3_DEL1123660,II32_MH63RS3_INV1115210,II32_MH63RS3_OTH1115240,FS32_MH63RS3_INS1117730,FS32_MH63RS3_DEL1117740,J4155_MH63RS3_INV1112480,117425_MH63RS3_INS1119870,117425_MH63RS3_DEL1119860,117425_MH63RS3_INV1118220,Azucena_MH63RS3_INS1122240,Azucena_MH63RS3_DEL1122230,Azucena_MH63RS3_INV1121010_2,D62_MH63RS3_INS1117120,D62_MH63RS3_DEL1117130,OglaRS2_MH63RS3_INS1149940,Nipponbare_MH63RS3_INS1141170,LJ_MH63RS3_INS1138160,
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| DNA seq | ATGACGCCCACTAAGTCCCTAACCAAACCCTATCCGCCGCCGCCCCCTTCTCCCTCTCGTCTCTCCCTCACCCTCTTCCTCACCATCTCCCGCTCGCGCCACCGCCGCCGCGGGCGCGTCCACCTGCGCCGCCGCGGCCCCGTCCACCTCCGCCGCCGCCGCCTTCCCCTTGCTCCGTCGCCATCGTCGTCCCCGTCGGCTCGCGCCGCGCTTCTGCCTCCGCCTCCGCCTCCCCTTCGCGGCACCGCCACCTCCGCCACCACCACCGCCGTCGCCGTCGCTGAGCAACGCCACTTCCGCCTTTTCGCCTCGCTCCGCCGTCGCCGAGCACCGCCGTCCCCCGCTGCCGTCGCCATCACGGAGCACCGCCGCCGCGTGCGGATCCGACCTCCATGCAGTCGGTGTGAGGGCTTGACCAGGCCGACAGGCCCTCACATCCGCCGCCGCCTCCTCTTACTCCCCCATCTCTGGGCCTCTGGCCGCCATCGCACAATCCGTCTGTGCACGTGAACACGTCTTCACTCTTCTCGGTCTAGCTTCCCCCGCTGCCGCGCCGTCGGGCATCCTCTGGTCGCCGCCGTCTCTTCCTTCCCATGGAGCAGATCCACGGTGCAAGGCGTCCTTCGGCCAATCTGTTGCCTCCCTTCCCCGCAACAGATGTGGAAGGGGCCCTTACTTTCAAAGGTTGAATTTATCGTATGAATACTGAACATCATCATGCAGCTGCTTGGAATACTCAAGAACCTCCTCCATCACAGCAAAAAGGTTGTGACATTTTCTTTGTGCCATTTCTTCAATTAGGTACACATGTTCAGTATTCATAAGATAAATTGTGCATATTGTCTTATGTTGTATGACATTTTCTAACTGTTTAAAATTCTGGTTCGTCTTTGCCAAGTTATCAGGGCTCTATGCTCCTGTAAGCATGTAGTAGTCCTAGAACAAAATGGAAGCAACACTGCCAGTGGCTTATGTGAGCATGTGTTGATTCCTGGATGGCCAGCCTCTTGCTCGAGCTGCTGTAGTCCCAGGCTATCCAGGGAGGAGATGTTAGCAGCCAAGCTCAAGGAAATCATTATCGCACCGCTTTCTCGAGGTGTCATTCTTTTGCATAGTGATCTTTGTTGGCAGAGAAAAAACATGTTACATGACATTGTTACTGTGTTTACAAAAGGTGAGAGAAGAGGGTTTGAGGAAGAAAAATGAATTATCATTTCTTATTGGTTATAGGTTAGTACAAGAAAACATTTTGGGCAATCTATTGTGGATAATAGCAAAGGGAGAGTTTATCTAACCAACTTACCATTATTATTCAGCAATATAGCATAGCAATAGCTTCAGCTCACTAAATCTGAAATTTTCATTAATCAATTATTTGTCAGCTCGACATCATCAGTGATAGAGCTATAGATGTTAGCAGCTATAGATGCAACATCTGGTGGGATATTCGATAATCTTATTTGACAGTTCAACATCTGGTGAGATACTTGGTAGAGCTATAGATGCAGAAGCTAGAAAACATGGTGGCTTCATGAGAACATTTAGGTAGAGTGTAGCTGTTGCAGAACAATTGCAGGACACTGGCATATGAGATGCTAATATCAACTCAATTTTGGAATTCCCTTCTATTCAGGGGTTGCGTATATAGCACTCTTCTGACTTACATTGTACCCCTTCTTGATAATACTCTAGGAGTTAATTTATTTTCACTGGTTTTACACAGGTATTTCATAGCTGTTCAAAAGTGCCTTGGTCTATACTCAGAGAATGGTCAATATTGCACTAATGTTGACCGATTATGCACATTGTATATCTCACTTAAAAAAGAATATGGTTGGTCATCTGCTGTTAAGGTAAACTACCTCAAACTGTTTTTATTTTTTCTTTGTTCCTTCATGTTAAATTGTTGAGCTCTCCGGGCACACAACAGTATCTTGATATATGTGGTATTTATTTATTCTATATTGCAATACTAATTTGCTGAATCCCAAGTTGTCTATCCATATATATGGTGAGTGGGGCATGCACTGTAGAAGCTGTGGATCTAAAATTGTCTCTAATTGCAACAGCGCATGCCCCTTGATTTCCTAGGAGGAGAGAAATTTCAGGAGGCAGCAGATAATTATGTCAGACCCCTATTAACCAAGGTAAATTCAGCAGCTCTTGGGAGGTACTTTAAGTTTCTATTTAAGGAGTCTCATTTATGGTTACCATTTGTTTTTCTTAGTGTATACCTTATACCCTTTTTCAATTTTTCAGGCAGCATAATGTTTCTCTTTGTTGCAATTGATTAACATGTCTCATATTTTGTAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTAATAGCAGTTATGCTTCTCAAAATCATTTTTTGTACTTCTTTTTCTCTGTTGTAGCATGATCTTTCAGATTGCCCTACATAATGTTTATTTTTTATACCTATAGCCATATTGATTACTTCAGATTTGACATGGAAAAATGTGAAATATTTAAAAGAACTCAGATTCAGTCAGAACTATTGTGTAAGCATGCATAGAAAGCTACCCTAAATAGACTTGATGCCCATTTGTCAAGTACAGCCTACATGTGAAGTAATCTAATACAAGCAGTTATAAATTAAGTATATATAAATCGAATCTCAGAAAGCCTATGAATAAGATAGCTGAGATTTCTTATAAAATGGTAACTTCCTTTCCTGTTGCCTCTTCCTGTTAATGTACATACTGTGAATGGGAAGCCTATGTTGCCATGCTGATACCAACTACAGGTTTGGAGCCTCAATGTAAAACATGTCTATAGTTTCTTTGGTTTAGATAGTAGACTGATTTCGTGTTGTACAGAAACAATAAACATGGAATAGGCCCATATTATGTCTGCAATCATCTTAATCTGCTAGATGATATTATCAGGTATATTCCTCCCTTCTTGCTGATTTCTTCGTGAAAAACTCCAATAGGGCTGTATTTGAAATCGAACTAAAGTGGTACAGGATAGAGGCTGAACAAGGGAAACTAAATTATAAGGATTCTGATGAGTTGCTTGAATTTTTTCAGAAACGTAGCATTCTGGCTGGTTGTCACTTCTTATTCCGGGAACTAGAAGATGCAGTCCAGTTATGAATTCAATCATTTTCAGTTATGGCTTCGATTCTTAACAAGGTCACCCACCTGATGGCTGCTATTCAAAACCATTTGCAAAGCCTGTTGTCAAGGTAAAGCCGTAAAGGTTAGTTTAAACATGGTAAACAACGAGATGCCTCATGGATCTTTCTACAAGATAGACCGCACATGTTTAGGGAATCACGTAAACTTATCCCTTAGCAGGGTAATGGACGGTCCCAGCTAGGGTTTTTTAGGGCAGGTAGATGCGGCCGCCGCGGCGGAGGTGGACGCGACCACGGCAACGGCAATGACCACGCCAGTGTGAGGCGAATGCGCGGACCAGCGGCGCGTGGCCTCAGTGCTAGGGAAAACAGAGGGTAGGAGAAGGATGATATCAAGAACGGGGCAGCAACACGTAGGATTGGGAGACGAGGCATTCCTGAGCACCGTCGCTGTGTCAGCAGATCTGTCCGCGCGGATCCATCGTTTTATTTTCCTTAGAGCCACAATACCCATAGCAGCACGGCCAAAATCAGTAGTCAACCCTAATAGATCGCTTCTTAAGCTATCTCTGCAATACCTCTCTTTTCTTTTCTCACTTACAGATCCACCATTCTCGGATCAGAGCTATAGATGAGAACCCTACCTCATAGTCTCTGATGTTAACGCAACTATAGTTTGTTATTCTTCTTTTTCCTCTTTTGTATTCTTGCCTTTTAATTTACGGGTAAATTATAACTTTTGCTTTTTATGGCACAGGATGTAAAACAACTTCTATTCTTGGGCCTTGGAATCGCTGCGCGCACGTCTTTCTCTACCAGGTGATGTACCCATATATCTATATTTTTATATGGAATCAGCTGTACATTTTTTCGGTCCCTTTGTGTTTCCTAGCTAATTTCCTAAATTGTGCATATACAGTTAGATACACTCTTCCTTTCTTTTGAGCTTTCATGGAACCGAGTTTGAGAAGGCTAGAAAGTTATTTGATTTCAAAATGATCCATGCAAACTTCTAATTTTATACCGATGGTACAGCAGTAACAATAATTGATGTGGCCTTGCTCACACACAGAAGCTATATTAGTCCACTTTGAAGTACAGTTTATAGCCCTCAGCCTACTTTTAGATCATGTGTTCCATTTTAGGTGGATAGAGTTGCATGGATGCTCATGGATCCATGCAACACTATAGTTTCCACTCCATCAGCATTTGGGAATACCTTCTGCACCTGCACCGCTGGTATTATACCATCACAGTGGTAAATACTAAATGTTGCCATATCTCTTTAGGAATAGAAAACAGTTCCGAATACAAAAAAATTCCATATTTCTTTAAAAGGCAATATTAAATGCTGTATTTATTGTGCACCATTATTTGCTCCTCTTTATTGTGTAATTTTATTCTTACCATTATCATCTTGTTATATTCTTACTATATCTTATTAGAGCACTAGAAACCACTCTTTTATCGTCTTATCATATAGCTTACTATCTTACGTTGTACATATTTTGCTTTCACCAAAAACAATTGGTTTTTATATGCACCTACAGTAATACCACCTCTGATTTTAGATCTGTCTCCATTCTAAAAGAGCAAAGCTTTGTTCAACCACTGACATACAAACAACCTATATTCCAGCTTCTCTATGATGGCTCGAACATCTGCTATGCTGAGATTCACCCAGTTAGATGAAGAAGATTTTGTAAGTACACACAAATACCTTCCAAGCCTGCATCAACGTAATATCCTATCTGTTACTAATGGGGGAATTTTTTATAGGCTCTCCCACCTGAGATTGTAGCCAGCTGCAATGGATACCATGGAAAATATTTAACCTTGGTCACACGCCATAACAAACCAGTGAATGTTAGGCTCGAAAAAAGAGGCCAGTCATTCTATATCTGCAAAGGTTGGAAAAAATTTGTTGAGCTTACTGGCTTACGCGTTGGACAATGTATTAGATTCAGTGTTTCTTCTCCATCAACACTTGATCTCCTCATACTTGACAAGCATGGAGTTCCCAAGCTTCCCATGCCTGCTTCATCAGAAGAACACCTCAGGTTCAAAGCAAAAAGGTCTATACACCAAAACAGCAAAGGTATTCGTATCACACAAACACCTTTCATCAGAAATAATATGATTGTAATCTCGAACCAGTTAGCTAGGAACTCATCTATTCCATTAGTTACACCATACTCCGTATCATTTAGGATAACACTTTACTTACTAGCATGCTCCATATTTCTATTTCAGGCCATTCATCCAGTCATGGTCCAGAGTCATCGTCTCCTATCAATCACAGGATCAACAAATCAGGTCAACTCACTATCCATGTCTTTACTTTCAATTACGCTCCTCTTTTAATCCTAACGAAATTTCGGTTCGTGCAAATAACATGACGCCACGCAACAACGCTATCTTTTAATCGTACAGATCAACCTATCATACCACTTCTGCAGTTCTATACCTGTCTATGCATGTATGCTCCGCCTTTGATTCCATCAGATGGCTATCTTTCCATCTGTGTAATGCTCTAGGCACCTTAGCTGATCTTCATCATGTGGATCAATAAACAAATTTGCGTTTATTATAACACCGGTCATCAGCCTATGTTACTGTTCTTACTTTGAACCACACCGCTCCACAACTGATCCACTCGCATTAATTTTGGTCCTATCTTCAGGACCTAAGCACACTACCGCCTAAAATATATTTACCTTCTTATTTTAGTGCTGATGCATCTATTCTCACTCCATGTTAAGATACACCATACAAGAAATACCAGAGGCACTTCTACAAATCGAACCATTCCACATTGTCATTTTCTATAGTATTAATAGCTGGTTTCTTTCATACGCATTGAAAATGCTTATAGAATACTTTCTTGCAGCGAACACCAAACCCAAGTTTGCAGATGATATCTAAGCGCAGATACTGGGAGCCCTTCAACCAGCATGATCCTTCACAGATCGACAGACCATCGTTGCAACCTAAAAAACAGATGGACAAATTTCGCCCTCAACAATGGCATAAAGCTCCACACAGTATGCATTTTCCATTTTTAAGACTACCCATCGAGGAGCAACCGTCGATATCTTCTGAATATGCTATCAATGTAGTCTGATCTCATGCTTTTGTTAGCGGCAAAGCTCGGTGTCTCCATACAGTCTGCTGTTTATGTAATATACTGCCCATGTTATAATCGTTACCCCTGTGCACTATAGACACGCTGTGGGCACTGCACTTATCACTCTATTATGGCACTTCCATATGTAGCTACTGATGCAGACACCGATTAACCTCCATGCCTATGTATGCACTATTCACTGCCTTAGCTGTAGAGTCCCGGTATCCGTCCCTCGATGCTTATTACCTTTTTGGGATCATTAGCTATACATACTGTCCTGTATTTACTGCCTTTGCCTCTTTAAAATGGTTGGTTATGCCTGTGCAC
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| CDS seq | MTPTKSLTKPYPPPPPSPSRLSLTLFLTISRSRHRRRGRVHLRRRGPVHLRRRRLPLAPSPSSSPSARAALLPPPPPPLRGTATSATTTAVAVAEQRHFRLFASLRRRRAPPSPAAVAITEHRRRVRIRPPCSRCLEYSRTSSITAKSYQGSMLLYFIAVQKCLGLYSENGQYCTNVDRLCTLYISLKKEYGWSSAVKRMPLDFLGGEKFQEAADNYVRPLLTKGVPSLFSDLSPLYEQPGKVYSSLLADFFVKNSNRAVFEIELKWYRIEAEQGKLNYKDSDELLEFFQKLMASILNKVTHLMAAIQNHLQSLLSRCGRRGGGGRDHGNGNDHASDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSANTKPKFADDI
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| Protein seq | MTPTKSLTKPYPPPPPSPSRLSLTLFLTISRSRHRRRGRVHLRRRGPVHLRRRRLPLAPSPSSSPSARAALLPPPPPPLRGTATSATTTAVAVAEQRHFRLFASLRRRRAPPSPAAVAITEHRRRVRIRPPCSRCLEYSRTSSITAKSYQGSMLLYFIAVQKCLGLYSENGQYCTNVDRLCTLYISLKKEYGWSSAVKRMPLDFLGGEKFQEAADNYVRPLLTKGVPSLFSDLSPLYEQPGKVYSSLLADFFVKNSNRAVFEIELKWYRIEAEQGKLNYKDSDELLEFFQKLMASILNKVTHLMAAIQNHLQSLLSRCGRRGGGGRDHGNGNDHASDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSANTKPKFADDI |
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| Function | B3 domain-containing protein Os10g0323000 [UniProtKB/Swiss-Prot:Q7XFU9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.1 | Chr11 | 13396613 | 13403197 | + | maker | ||
| CDS seq | ATGACGCCCACTAAGTCCCTAACCAAACCCTATCCGCCGCCGCCCCCTTCTCCCTCTCGTCTCTCCCTCACCCTCTTCCTCACCATCTCCCGCTCGCGCCACCGCCGCCGCGGGCGCGTCCACCTGCGCCGCCGCGGCCCCGTCCACCTCCGCCGCCGCCGCCTTCCCCTTGCTCCGTCGCCATCGTCGTCCCCGTCGGCTCGCGCCGCGCTTCTGCCTCCGCCTCCGCCTCCCCTTCGCGGCACCGCCACCTCCGCCACCACCACCGCCGTCGCCGTCGCTGAGCAACGCCACTTCCGCCTTTTCGCCTCGCTCCGCCGTCGCCGAGCACCGCCGTCCCCCGCTGCCGTCGCCATCACGGAGCACCGCCGCCGCGTGCGGATCCGACCTCCATGCAGTCGCTGCTTGGAATACTCAAGAACCTCCTCCATCACAGCAAAAAGTTATCAGGGCTCTATGCTCCTGTATTTCATAGCTGTTCAAAAGTGCCTTGGTCTATACTCAGAGAATGGTCAATATTGCACTAATGTTGACCGATTATGCACATTGTATATCTCACTTAAAAAAGAATATGGTTGGTCATCTGCTGTTAAGCGCATGCCCCTTGATTTCCTAGGAGGAGAGAAATTTCAGGAGGCAGCAGATAATTATGTCAGACCCCTATTAACCAAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTATATTCCTCCCTTCTTGCTGATTTCTTCGTGAAAAACTCCAATAGGGCTGTATTTGAAATCGAACTAAAGTGGTACAGGATAGAGGCTGAACAAGGGAAACTAAATTATAAGGATTCTGATGAGTTGCTTGAATTTTTTCAGAAACTTATGGCTTCGATTCTTAACAAGGTCACCCACCTGATGGCTGCTATTCAAAACCATTTGCAAAGCCTGTTGTCAAGATGCGGCCGCCGCGGCGGAGGTGGACGCGACCACGGCAACGGCAATGACCACGCCAGTGATGTAAAACAACTTCTATTCTTGGGCCTTGGAATCGCTGCGCGCACGTCTTTCTCTACCAGCTTCTCTATGATGGCTCGAACATCTGCTATGCTGAGATTCACCCAGTTAGATGAAGAAGATTTTGCTCTCCCACCTGAGATTGTAGCCAGCTGCAATGGATACCATGGAAAATATTTAACCTTGGTCACACGCCATAACAAACCAGTGAATGTTAGGCTCGAAAAAAGAGGCCAGTCATTCTATATCTGCAAAGGTTGGAAAAAATTTGTTGAGCTTACTGGCTTACGCGTTGGACAATGTATTAGATTCAGTGTTTCTTCTCCATCAACACTTGATCTCCTCATACTTGACAAGCATGGAGTTCCCAAGCTTCCCATGCCTGCTTCATCAGAAGAACACCTCAGGTTCAAAGCAAAAAGGTCTATACACCAAAACAGCAAAGGCCATTCATCCAGTCATGGTCCAGAGTCATCGTCTCCTATCAATCACAGGATCAACAAATCAGCGAACACCAAACCCAAGTTTGCAGATGATATCTAA
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| Protein seq | MTPTKSLTKPYPPPPPSPSRLSLTLFLTISRSRHRRRGRVHLRRRGPVHLRRRRLPLAPSPSSSPSARAALLPPPPPPLRGTATSATTTAVAVAEQRHFRLFASLRRRRAPPSPAAVAITEHRRRVRIRPPCSRCLEYSRTSSITAKSYQGSMLLYFIAVQKCLGLYSENGQYCTNVDRLCTLYISLKKEYGWSSAVKRMPLDFLGGEKFQEAADNYVRPLLTKGVPSLFSDLSPLYEQPGKVYSSLLADFFVKNSNRAVFEIELKWYRIEAEQGKLNYKDSDELLEFFQKLMASILNKVTHLMAAIQNHLQSLLSRCGRRGGGGRDHGNGNDHASDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSANTKPKFADDI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.2 | Chr11 | 13396655 | 13403197 | + | maker | ||
| CDS seq | ATGGCTTCGATTCTTAACAAGGTCACCCACCTGATGGCTGCTATTCAAAACCATTTGCAAAGCCTGTTGTCAAGATGCGGCCGCCGCGGCGGAGGTGGACGCGACCACGGCAACGGCAATGACCACGCCAGTGATGTAAAACAACTTCTATTCTTGGGCCTTGGAATCGCTGCGCGCACGTCTTTCTCTACCAGCTTCTCTATGATGGCTCGAACATCTGCTATGCTGAGATTCACCCAGTTAGATGAAGAAGATTTTGCTCTCCCACCTGAGATTGTAGCCAGCTGCAATGGATACCATGGAAAATATTTAACCTTGGTCACACGCCATAACAAACCAGTGAATGTTAGGCTCGAAAAAAGAGGCCAGTCATTCTATATCTGCAAAGGTTGGAAAAAATTTGTTGAGCTTACTGGCTTACGCGTTGGACAATGTATTAGATTCAGTGTTTCTTCTCCATCAACACTTGATCTCCTCATACTTGACAAGCATGGAGTTCCCAAGCTTCCCATGCCTGCTTCATCAGAAGAACACCTCAGGTTCAAAGCAAAAAGGTCTATACACCAAAACAGCAAAGGCCATTCATCCAGTCATGGTCCAGAGTCATCGTCTCCTATCAATCACAGGATCAACAAATCAGGTCAACTCACTATCCATCGAACACCAAACCCAAGTTTGCAGATGATATCTAAGCGCAGATACTGGGAGCCCTTCAACCAGCATGATCCTTCACAGATCGACAGACCATCGTTGCAACCTAAAAAACAGATGGACAAATTTCGCCCTCAACAATGGCATAAAGCTCCACACAGTATGCATTTTCCATTTTTAAGACTACCCATCGAGGAGCAACCGTCGATATCTTCTGAATATGCTATCAATGTAGTCTGA
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| Protein seq | MASILNKVTHLMAAIQNHLQSLLSRCGRRGGGGRDHGNGNDHASDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSGQLTIHRTPNPSLQMISKRRYWEPFNQHDPSQIDRPSLQPKKQMDKFRPQQWHKAPHSMHFPFLRLPIEEQPSISSEYAINVV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.3 | Chr11 | 13398039 | 13403197 | + | maker | ||
| CDS seq | ATGCAACATCTGGTGGGATATTCGATAATCTTATTTGACAGTTCAACATCTGGTGAGATACTTGGTAGAGCTATAGATGCAGAAGCTAGAAAACATGGTGGCTTCATGAGAACATTTAGGTATTTCATAGCTGTTCAAAAGTGCCTTGGTCTATACTCAGAGAATGGTCAATATTGCACTAATGTTGACCGATTATGCACATTGTATATCTCACTTAAAAAAGAATATGGTTGGTCATCTGCTGTTAAGCGCATGCCCCTTGATTTCCTAGGAGGAGAGAAATTTCAGGAGGCAGCAGATAATTATGTCAGACCCCTATTAACCAAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTATATTCCTCCCTTCTTGCTGATTTCTTCGTGAAAAACTCCAATAGGGCTGTATTTGAAATCGAACTAAAGTGGTACAGGATAGAGGCTGAACAAGGGAAACTAAATTATAAGGATTCTGATGAGTTGCTTGAATTTTTTCAGAAACTTATGGCTTCGATTCTTAACAAGGTCACCCACCTGATGGCTGCTATTCAAAACCATTTGCAAAGCCTGTTGTCAAGATGCGGCCGCCGCGGCGGAGGTGGACGCGACCACGGCAACGGCAATGACCACGCCAGTGATGTAAAACAACTTCTATTCTTGGGCCTTGGAATCGCTGCGCGCACGTCTTTCTCTACCAGCTTCTCTATGATGGCTCGAACATCTGCTATGCTGAGATTCACCCAGTTAGATGAAGAAGATTTTGCTCTCCCACCTGAGATTGTAGCCAGCTGCAATGGATACCATGGAAAATATTTAACCTTGGTCACACGCCATAACAAACCAGTGAATGTTAGGCTCGAAAAAAGAGGCCAGTCATTCTATATCTGCAAAGGTTGGAAAAAATTTGTTGAGCTTACTGGCTTACGCGTTGGACAATGTATTAGATTCAGTGTTTCTTCTCCATCAACACTTGATCTCCTCATACTTGACAAGCATGGAGTTCCCAAGCTTCCCATGCCTGCTTCATCAGAAGAACACCTCAGGTTCAAAGCAAAAAGGTCTATACACCAAAACAGCAAAGGCCATTCATCCAGTCATGGTCCAGAGTCATCGTCTCCTATCAATCACAGGATCAACAAATCAGGTCAACTCACTATCCATCGAACACCAAACCCAAGTTTGCAGATGATATCTAAGCGCAGATACTGGGAGCCCTTCAACCAGCATGATCCTTCACAGATCGACAGACCATCGTTGCAACCTAAAAAACAGATGGACAAATTTCGCCCTCAACAATGGCATAAAGCTCCACACAGTATGCATTTTCCATTTTTAAGACTACCCATCGAGGAGCAACCGTCGATATCTTCTGAATATGCTATCAATGTAGTCTGA
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| Protein seq | MQHLVGYSIILFDSSTSGEILGRAIDAEARKHGGFMRTFRYFIAVQKCLGLYSENGQYCTNVDRLCTLYISLKKEYGWSSAVKRMPLDFLGGEKFQEAADNYVRPLLTKGVPSLFSDLSPLYEQPGKVYSSLLADFFVKNSNRAVFEIELKWYRIEAEQGKLNYKDSDELLEFFQKLMASILNKVTHLMAAIQNHLQSLLSRCGRRGGGGRDHGNGNDHASDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSGQLTIHRTPNPSLQMISKRRYWEPFNQHDPSQIDRPSLQPKKQMDKFRPQQWHKAPHSMHFPFLRLPIEEQPSISSEYAINVV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.4 | Chr11 | 13396629 | 13403197 | + | maker | ||
| CDS seq | ATGGCTTCGATTCTTAACAAGGTCACCCACCTGATGGCTGCTATTCAAAACCATTTGCAAAGCCTGTTGTCAAGATGCGGCCGCCGCGGCGGAGGTGGACGCGACCACGGCAACGGCAATGACCACGCCAGTGATGTAAAACAACTTCTATTCTTGGGCCTTGGAATCGCTGCGCGCACGTCTTTCTCTACCAGCTTCTCTATGATGGCTCGAACATCTGCTATGCTGAGATTCACCCAGTTAGATGAAGAAGATTTTGCTCTCCCACCTGAGATTGTAGCCAGCTGCAATGGATACCATGGAAAATATTTAACCTTGGTCACACGCCATAACAAACCAGTGAATGTTAGGCTCGAAAAAAGAGGCCAGTCATTCTATATCTGCAAAGGTTGGAAAAAATTTGTTGAGCTTACTGGCTTACGCGTTGGACAATGTATTAGATTCAGTGTTTCTTCTCCATCAACACTTGATCTCCTCATACTTGACAAGCATGGAGTTCCCAAGCTTCCCATGCCTGCTTCATCAGAAGAACACCTCAGGTTCAAAGCAAAAAGGTCTATACACCAAAACAGCAAAGGCCATTCATCCAGTCATGGTCCAGAGTCATCGTCTCCTATCAATCACAGGATCAACAAATCAGGTCAACTCACTATCCATCGAACACCAAACCCAAGTTTGCAGATGATATCTAAGCGCAGATACTGGGAGCCCTTCAACCAGCATGATCCTTCACAGATCGACAGACCATCGTTGCAACCTAAAAAACAGATGGACAAATTTCGCCCTCAACAATGGCATAAAGCTCCACACAGTATGCATTTTCCATTTTTAAGACTACCCATCGAGGAGCAACCGTCGATATCTTCTGAATATGCTATCAATGTAGTCTGA
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| Protein seq | MASILNKVTHLMAAIQNHLQSLLSRCGRRGGGGRDHGNGNDHASDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSGQLTIHRTPNPSLQMISKRRYWEPFNQHDPSQIDRPSLQPKKQMDKFRPQQWHKAPHSMHFPFLRLPIEEQPSISSEYAINVV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.5 | Chr11 | 13396613 | 13403197 | + | maker | ||
| CDS seq | ATGACGCCCACTAAGTCCCTAACCAAACCCTATCCGCCGCCGCCCCCTTCTCCCTCTCGTCTCTCCCTCACCCTCTTCCTCACCATCTCCCGCTCGCGCCACCGCCGCCGCGGGCGCGTCCACCTGCGCCGCCGCGGCCCCGTCCACCTCCGCCGCCGCCGCCTTCCCCTTGCTCCGTCGCCATCGTCGTCCCCGTCGGCTCGCGCCGCGCTTCTGCCTCCGCCTCCGCCTCCCCTTCGCGGCACCGCCACCTCCGCCACCACCACCGCCGTCGCCGTCGCTGAGCAACGCCACTTCCGCCTTTTCGCCTCGCTCCGCCGTCGCCGAGCACCGCCGTCCCCCGCTGCCGTCGCCATCACGGAGCACCGCCGCCGCGTGCGGATCCGACCTCCATGCAGTCGCTGCTTGGAATACTCAAGAACCTCCTCCATCACAGCAAAAAGTTATCAGGGCTCTATGCTCCTGTAA
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| Protein seq | MTPTKSLTKPYPPPPPSPSRLSLTLFLTISRSRHRRRGRVHLRRRGPVHLRRRRLPLAPSPSSSPSARAALLPPPPPPLRGTATSATTTAVAVAEQRHFRLFASLRRRRAPPSPAAVAITEHRRRVRIRPPCSRCLEYSRTSSITAKSYQGSMLL |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.6 | Chr11 | 13398039 | 13403197 | + | maker | ||
| CDS seq | ATGCAACATCTGGTGGGATATTCGATAATCTTATTTGACAGTTCAACATCTGGTGAGATACTTGGTAGAGCTATAGATGCAGAAGCTAGAAAACATGGTGGCTTCATGAGAACATTTAGGTATTTCATAGCTGTTCAAAAGTGCCTTGGTCTATACTCAGAGAATGGTCAATATTGCACTAATGTTGACCGATTATGCACATTGTATATCTCACTTAAAAAAGAATATGGTTGGTCATCTGCTGTTAAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTATATTCCTCCCTTCTTGCTGATTTCTTCGTGAAAAACTCCAATAGGGCTGTATTTGAAATCGAACTAAAGTGGTACAGGATAGAGGCTGAACAAGGGAAACTAAATTATAAGGATTCTGATGAGTTGCTTGAATTTTTTCAGAAACGTCACCCACCTGATGGCTGCTATTCAAAACCATTTGCAAAGCCTGTTGTCAAGGATGTAAAACAACTTCTATTCTTGGGCCTTGGAATCGCTGCGCGCACGTCTTTCTCTACCAGCTTCTCTATGATGGCTCGAACATCTGCTATGCTGAGATTCACCCAGTTAGATGAAGAAGATTTTGCTCTCCCACCTGAGATTGTAGCCAGCTGCAATGGATACCATGGAAAATATTTAACCTTGGTCACACGCCATAACAAACCAGTGAATGTTAGGCTCGAAAAAAGAGGCCAGTCATTCTATATCTGCAAAGGTTGGAAAAAATTTGTTGAGCTTACTGGCTTACGCGTTGGACAATGTATTAGATTCAGTGTTTCTTCTCCATCAACACTTGATCTCCTCATACTTGACAAGCATGGAGTTCCCAAGCTTCCCATGCCTGCTTCATCAGAAGAACACCTCAGGTTCAAAGCAAAAAGGTCTATACACCAAAACAGCAAAGGCCATTCATCCAGTCATGGTCCAGAGTCATCGTCTCCTATCAATCACAGGATCAACAAATCAGGTCAACTCACTATCCATCGAACACCAAACCCAAGTTTGCAGATGATATCTAAGCGCAGATACTGGGAGCCCTTCAACCAGCATGATCCTTCACAGATCGACAGACCATCGTTGCAACCTAAAAAACAGATGGACAAATTTCGCCCTCAACAATGGCATAAAGCTCCACACAGTATGCATTTTCCATTTTTAAGACTACCCATCGAGGAGCAACCGTCGATATCTTCTGAATATGCTATCAATGTAGTCTGA
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| Protein seq | MQHLVGYSIILFDSSTSGEILGRAIDAEARKHGGFMRTFRYFIAVQKCLGLYSENGQYCTNVDRLCTLYISLKKEYGWSSAVKGVPSLFSDLSPLYEQPGKVYSSLLADFFVKNSNRAVFEIELKWYRIEAEQGKLNYKDSDELLEFFQKRHPPDGCYSKPFAKPVVKDVKQLLFLGLGIAARTSFSTSFSMMARTSAMLRFTQLDEEDFALPPEIVASCNGYHGKYLTLVTRHNKPVNVRLEKRGQSFYICKGWKKFVELTGLRVGQCIRFSVSSPSTLDLLILDKHGVPKLPMPASSEEHLRFKAKRSIHQNSKGHSSSHGPESSSPINHRINKSGQLTIHRTPNPSLQMISKRRYWEPFNQHDPSQIDRPSLQPKKQMDKFRPQQWHKAPHSMHFPFLRLPIEEQPSISSEYAINVV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0186200 | OsMH63_11T0186200.7 | Chr11 | 13396613 | 13399759 | + | maker | ||
| CDS seq | ATGACGCCCACTAAGTCCCTAACCAAACCCTATCCGCCGCCGCCCCCTTCTCCCTCTCGTCTCTCCCTCACCCTCTTCCTCACCATCTCCCGCTCGCGCCACCGCCGCCGCGGGCGCGTCCACCTGCGCCGCCGCGGCCCCGTCCACCTCCGCCGCCGCCGCCTTCCCCTTGCTCCGTCGCCATCGTCGTCCCCGTCGGCTCGCGCCGCGCTTCTGCCTCCGCCTCCGCCTCCCCTTCGCGGCACCGCCACCTCCGCCACCACCACCGCCGTCGCCGTCGCTGAGCAACGCCACTTCCGCCTTTTCGCCTCGCTCCGCCGTCGCCGAGCACCGCCGTCCCCCGCTGCCGTCGCCATCACGGAGCACCGCCGCCGCGTGCGGATCCGACCTCCATGCAGTCGCTGCTTGGAATACTCAAGAACCTCCTCCATCACAGCAAAAAGTTATCAGGGCTCTATGCTCCTGTATTTCATAGCTGTTCAAAAGTGCCTTGGTCTATACTCAGAGAATGGTCAATATTGCACTAATGTTGACCGATTATGCACATTGTATATCTCACTTAAAAAAGAATATGGTTGGTCATCTGCTGTTAAGCGCATGCCCCTTGATTTCCTAGGAGGAGAGAAATTTCAGGAGGCAGCAGATAATTATGTCAGACCCCTATTAACCAAGGTAAATTCAGCAGCTCTTGGGAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGAAACAATAAACATGGAATAGGCCCATATTATGTCTGCAATCATCTTAATCTGCTAGATGATATTATCAGGATAGAGGCTGAACAAGGGAAACTAAATTATAAGGATTCTGATGAGTTGCTTGAATTTTTTCAGAAACGTAGCATTCTGGCTGGTTGTCACTTCTTATTCCGGGAACTAGAAGATGCAGTCCAGTTATGA
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| Protein seq | MTPTKSLTKPYPPPPPSPSRLSLTLFLTISRSRHRRRGRVHLRRRGPVHLRRRRLPLAPSPSSSPSARAALLPPPPPPLRGTATSATTTAVAVAEQRHFRLFASLRRRRAPPSPAAVAITEHRRRVRIRPPCSRCLEYSRTSSITAKSYQGSMLLYFIAVQKCLGLYSENGQYCTNVDRLCTLYISLKKEYGWSSAVKRMPLDFLGGEKFQEAADNYVRPLLTKVNSAALGREYHHYFLILAHCMSNLARNNKHGIGPYYVCNHLNLLDDIIRIEAEQGKLNYKDSDELLEFFQKRSILAGCHFLFRELEDAVQL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.9069885 | 14.5777065 | 8.512428 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0011650 | RBH | 1.601796 | 3.045177 | 10.002102 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0011650 | RBH | 0.643790 | 4.706949 | 3.228683 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0011600 | RBH | 2.506832 | 10.384840 | 21.202873 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0011340 | RBH | 0.392173 | 0.159919 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0011760 | RBH | 11.183613 | 6.418734 | 16.585363 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0011620 | RBH | 1.075955 | 0.206617 | 2.476452 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0011750 | RBH | 0.427724 | 0.467581 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_Ung0001430 | RBH | 1.722450 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0011510 | RBH | 15.389654 | 21.339647 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0011350 | RBH | 1.238073 | 0.0 | 0.586129 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0011580 | RBH | 0.862745 | 5.257153 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G011490 | RBH | 1.234832 | 2.386131 | 1.983509 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Os XI: R9311 | R9311 | AGIS | R9311C11g36630 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_11g0134400 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_11g0132000 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_11g0129700 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_11g0133200 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | NA | NA | NA | NA | NA |
| Os cB: Basmati1 | Basmati1 | SICAU | NA | NA | NA | NA | NA |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G1131865700.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: DG | DG | SICAU | OsDGG1125112100.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1129500500.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: G46 | G46 | SICAU | OsG46G1120965300.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G1117332700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G1125329500.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G1133693800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G1122359400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | NA | NA | NA | NA | NA |
| Os GJ-adm: LJ | LJ | SICAU | NA | NA | NA | NA | NA |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | OsS548G1142564500.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG1129277700.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG1124652300.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG1119600100.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G1125153400.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG1127525400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G1130134100.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
