Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 02428_MH63RS3_INS1122230

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-temp: 02428 | 02428

Os XI-adm: Minghui 63 | MH63RS3

Chr11

12173140

SV Length:

Query Start:

Query End:

Allele sv Count:

333 bp

13398919

13399251

30

Gene_id	Chromosome	Start	End
OsMH63_11G0186200	Chr11	13396612	13403197

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
02428_117534_INS1119410	Chr11	12173140	12173140	12715081	12715413	333
02428_125619_INS1118370	Chr11	12173140	12173140	12682497	12682165	333
02428_125827_INS1118660	Chr11	12173140	12173140	13688045	13688377	333
02428_127564_INS1119220	Chr11	12173140	12173140	12542506	12542174	333
02428_127652_INS1123210	Chr11	12173140	12173140	12514874	12514542	333
02428_127742_INS1121170	Chr11	12173140	12173140	13367349	13367681	333
02428_132424_INS1119320	Chr11	12173140	12173140	12599577	12599245	333
02428_CN1_INS1118480	Chr11	12173140	12173140	14184371	14184703	333
02428_DG_INS1118420	Chr11	12173140	12173140	14771557	14771889	333
02428_FH838_INS1119250	Chr11	12173140	12173140	14374408	14374740	333
02428_G46_INS1119290	Chr11	12173140	12173140	13222795	13223127	333
02428_G630_INS1121780	Chr11	12173140	12173140	13625735	13626067	333
02428_G8_INS1118090	Chr11	12173140	12173140	12706738	12707070	333
02428_HZ_INS1119430	Chr11	12173140	12173140	13135737	13135405	333
02428_IR64_INS1118390	Chr11	12173140	12173140	12715272	12715604	333
02428_J4155_INS1115840	Chr11	12173140	12173140	12499255	12498923	333
02428_J4155S_INS1119990	Chr11	12173140	12173140	13149976	13149644	333
02428_LK638S_INS1119810	Chr11	12173140	12173140	13182026	13181694	333
02428_R498_INS1118690	Chr11	12173140	12173140	13118906	13119238	333
02428_R527_INS1120250	Chr11	12173140	12173140	13414146	13414478	333
02428_R9311_INS1120870	Chr11	12173140	12173140	13297371	13297703	333
02428_S548_INS1119580	Chr11	12173140	12173140	13320119	13320451	333
02428_Tumba_INS1117190	Chr11	12173140	12173140	13151286	13151618	333
02428_WSSM_INS1118260	Chr11	12173140	12173140	12924095	12924427	333
02428_XL628S_INS1118510	Chr11	12173140	12173140	13176114	13175782	333
02428_Y3551_INS1117490	Chr11	12173140	12173140	12995459	12995127	333
02428_Y58S_INS1120300	Chr11	12173140	12173140	13881967	13881635	333
02428_YX1_INS1118510	Chr11	12173140	12173140	12888813	12889145	333
02428_ZS97RS3_INS1117900	Chr11	12173140	12173140	13282788	13282456	333
02428_MH63RS3_INS1122230	Chr11	12173140	12173140	13398919	13399251	333

>02428_MH63RS3_INS1122230
TTTGTAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTAATAGCAGTTATGCTTCTCAAAATCATTTTTTGTACTTCTTTTTCTCTGTTGTAGCATGATCTTTCAGATTGCCCTACATAATGTTTATTTTTTATACCTATAGCCATATTGATTACTTCAGATTTGACATGGAAAAATGTGAAATATTTAAAAGAACTCAGATTCAGTCAGAACTATTGTGTAAGCATGCATAGAAAGCTACCCTAAATAGACTTGATGCCCATTTGTCAAGTACAGCCTACATGTGAAGTAATCTAATACAAGCAGTT