Variation ID: FH838_OglaRS2_DEL0442120

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-adm: FH838 | FH838
Os O.glaberrima: OglaRS2 | OglaRS2
Chr04
13597135
13597718
SV Length:
Query Start:
Query End:
Allele sv Count:
584 bp
24354508
24355091
39
Gene_id Chromosome Start End
Oglab_016865 Chr04 24354667 24356360
SV_id Chromosome ref_start ref_end query_start query_end length
FH838_02428_DEL0435640 Chr04 13597135 13597534 28068477 28068876 400
FH838_117425_DEL0435110 Chr04 13597135 13597534 26487702 26488101 400
FH838_125619_DEL0428780 Chr04 13597135 13597534 28674152 28674551 400
FH838_125827_DEL0427240 Chr04 13597135 13597534 29653418 29653817 400
FH838_127518_DEL0427610 Chr04 13597135 13597534 28876461 28876860 400
FH838_127564_DEL0429430 Chr04 13597135 13597534 29152580 29152979 400
FH838_127742_DEL0424490 Chr04 13597135 13597534 28906285 28906684 400
FH838_128077_DEL0433840 Chr04 13597135 13597534 26347621 26348020 400
FH838_132278_DEL0435670 Chr04 13597135 13597534 27552536 27552935 400
FH838_Azucena_DEL0436720 Chr04 13597135 13597534 26269930 26270329 400
FH838_Basmati1_DEL0436090 Chr04 13597135 13597534 26037459 26037858 400
FH838_CN1_DEL0430720 Chr04 13597135 13597534 28303555 28303954 400
FH838_D62_DEL0428290 Chr04 13597135 13597534 28336112 28336511 400
FH838_DHX2_DEL0434350 Chr04 13597135 13597534 26940689 26941088 400
FH838_G630_DEL0425410 Chr04 13597135 13597534 28918030 28918429 400
FH838_G8_DEL0423970 Chr04 13597135 13597534 28615502 28615901 400
FH838_HZ_DEL0424300 Chr04 13597135 13597534 29077952 29078351 400
FH838_IR64_DEL0427560 Chr04 13597135 13597534 27263808 27264207 400
FH838_J4155_DEL0433090 Chr04 13597135 13597534 27216938 27217337 400
FH838_J4155S_DEL0435040 Chr04 13597135 13597534 27784843 27785242 400
FH838_Kosh_DEL0436000 Chr04 13597135 13597534 27737222 27737621 400
FH838_KY131_DEL0437040 Chr04 13597135 13597534 28165798 28166197 400
FH838_Lemont_DEL0434570 Chr04 13597135 13597534 27069959 27070358 400
FH838_LJ_DEL0436080 Chr04 13597135 13597534 27068470 27068869 400
FH838_NamRoo_DEL0436150 Chr04 13597135 13597534 28024669 28025068 400
FH838_Nipponbare_DEL0434670 Chr04 13597135 13597534 27679732 27680131 400
FH838_R498_DEL0427070 Chr04 13597135 13597534 27798469 27798868 400
FH838_R527_DEL0429750 Chr04 13597135 13597534 28379130 28379529 400
FH838_R9311_DEL0424630 Chr04 13597135 13597534 28987040 28987437 398
FH838_S548_DEL0429440 Chr04 13597135 13597534 27860187 27860586 400
FH838_TM_DEL0427400 Chr04 13597135 13597534 27024824 27025223 400
FH838_Tumba_DEL0429660 Chr04 13597135 13597534 29345900 29346299 400
FH838_WSSM_DEL0423880 Chr04 13597135 13597534 28467208 28467607 400
FH838_Y3551_DEL0430280 Chr04 13597135 13597534 29139593 29139992 400
FH838_Y58S_DEL0429330 Chr04 13597135 13597534 28875648 28876047 400
FH838_YX1_DEL0425300 Chr04 13597135 13597534 27361865 27362264 400
FH838_ZH11_DEL0435850 Chr04 13597135 13597534 27226595 27226994 400
FH838_OglaRS2_DEL0442120 Chr04 13597135 13597718 24354508 24355091 584
FH838_MH63RS3_DEL0430810 Chr04 13597135 13597534 29399278 29399677 400

>FH838_OglaRS2_DEL0442120
TTTTTACTGTCCTTGAGCAACTGCAGTACCAAATCGTGACTGTTGATTCGAGATCATCCAACGGTCCAAAAGGCGTCGGTACCTCATGGTACCGCACCTCCCATTGACGCGGTACCGTGGTATGGAGGGTAGTTTTGTACTTTCGCGTTGTATACCGATTCACGGCTTCACGCACGCGGCATCTGTTTCTTCGCTGTTTCGCGAGAGAGGAGGAAGCGCTTGGCAGAAGCGAGAGAAAGAACCCTAGATGGCGGCGGGAGGAGGGGCATGTAGCGAATCCTGGATCAGCGACTCGATGGCGGCCAGATCGGGGATGGGTGGAGGTCATCAGCGGCAGGCCCAAATCGGCCAACCGTCGGGAGCTCGAAGATGGTTGCGGCGGCGATTCATCGGCGACGGTGAGCTCGGAGGTTTCTATGCTACATCGGCGAGCTCGAAGATGGTTGCATTGGCCGTTCGTCGGGAGCTCGGCGATGGTTGTGGCGGCGTTTCGTCGGGATCTCGGTGACCAAAAGCGGGAGGGAGATAGGCAGTCTTCAGTCTTCACTCGTTCCCTCCAGCCCAGGCGTCGCCGTCCAGTGCTG

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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