Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_04G0562800 | OGI:04103170 | 44/50 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:36902767-36910689 | ||||||||
Gene Symbol | - | ||||||||||
Mutant | - | ||||||||||
Stuctural Variations | Lemont_ZS97RS3_DEL0401860,Lemont_ZS97RS3_INS0442240,Lemont_ZS97RS3_INS0449510,Lemont_ZS97RS3_TRA0450730,Basmati1_ZS97RS3_INS0436440,Basmati1_ZS97RS3_INS0444280_1,132278_ZS97RS3_INS0448560_1,132278_ZS97RS3_TRA0452070,NamRoo_ZS97RS3_TRA0401170,NamRoo_ZS97RS3_INS0447790,NamRoo_ZS97RS3_TRA0456180,ZH11_ZS97RS3_INS0445400,ZH11_ZS97RS3_INS0452670,ZH11_ZS97RS3_TRA0457630,FS32_ZS97RS3_DEL0418270,Tumba_ZS97RS3_DEL0410040,Tumba_ZS97RS3_DEL0425040,Tumba_ZS97RS3_DEL0437590,IR64_ZS97RS3_DEL0435370,G630_ZS97RS3_DEL0427740,DHX2_ZS97RS3_INS0444580,DHX2_ZS97RS3_INS0451930,DHX2_ZS97RS3_TRA0453150,127652_ZS97RS3_INS0439250,127652_ZS97RS3_TRA0441030,MH63RS3_ZS97RS3_DEL0433260,Azucena_ZS97RS3_INS0410600,Azucena_ZS97RS3_INS0437480,Azucena_ZS97RS3_INS0450570,R498_ZS97RS3_DEL0425720,R498_ZS97RS3_DEL0428300,R9311_ZS97RS3_DEL0425320,Kosh_ZS97RS3_TRA0456910,Kosh_ZS97RS3_TRA0459790,Kosh_ZS97RS3_INS0463350,KY131_ZS97RS3_INS0442880,KY131_ZS97RS3_INS0450360,KY131_ZS97RS3_DEL0455170,02428_ZS97RS3_TRA0413530,02428_ZS97RS3_INS0450990_1,TM_ZS97RS3_DEL0418400,LJ_ZS97RS3_INS0441210,LJ_ZS97RS3_INS0450300,LJ_ZS97RS3_TRA0451390,Nipponbare_ZS97RS3_DEL0401640,Nipponbare_ZS97RS3_INS0445880,Nipponbare_ZS97RS3_INS0453020,132424_ZS97RS3_DEL0437170,125827_ZS97RS3_INS0404600,125827_ZS97RS3_INS0432800,FH838_ZS97RS3_DEL0435300,128077_ZS97RS3_INS0434930,128077_ZS97RS3_TRA0442730,128077_ZS97RS3_INS0450110,117425_ZS97RS3_INS0436120_1,117425_ZS97RS3_INS0439530,OglaRS2_ZS97RS3_INS0441350,OglaRS2_ZS97RS3_INS0454640,OglaRS2_ZS97RS3_INS0463470_1,R527_ZS97RS3_DEL0427280,125619_ZS97RS3_DEL0431740,127518_ZS97RS3_DEL0425470,XL628S_ZS97RS3_DEL0415820,XL628S_ZS97RS3_DEL0426080,LK638S_ZS97RS3_DEL0414140,117534_ZS97RS3_TRA0437670,117534_ZS97RS3_INS0443470,127564_ZS97RS3_DEL0441650,127564_ZS97RS3_DEL0448520,
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DNA seq | CTAGTACTTTAGATAGGAGTACTTATTTGGACTGGTGCGTGCGTGTACCACATCGAGATTCATGATGACACCGATCGATGTACAATATATCACGTGGTGCATGCATGCATGCATGTGTCGATCATGCGGCATGCGATGAACCCCCACATGATACTTGTTGGCCGCTTCGTCCGGTCGATCAGTCGCCAACTTTAATTGATACACCATCGTTCCCTGAACCTCAACGTGCATCTCGTCGATCGTCGCCAACAACTCTTCATGCATCTTGTCGTACGTGTACTGTGCGCGCGTGAGTCGACCTTATCGAGGGCTGATGAATTACAGGTACGGTGGTGGATCCATCAGGAAAAAGATCTTGTTTTCTTTAACCCTTGTGAGGCAGACGCATATGTTGGTACTAGGTGTGGACAATTACATAGCTTATACTTCCTCCGTCCTGAATATTTAAAGGCATTGACTTTTTTAAATATATTTAACCATTCATTTTATTTAAATAATTATTTATTCTTTTCTTATCATTTGATTCATTGTTAAATATTTGAATAAGACGAACGGTCAAACATGCTTAAAAAAGTCAATGGCGTCAAATATTTAGGGATGGAGAGAGTATAAGATTACTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCACATTCATATTGATGTTAATGAATCTAGATATTTCACAATATAAGTCATTCTAGCATTTCTCATATTTATATTGATGTTACATATCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTATTGTCACGCCCCGAACTAGTACCGATCGGAACTAGCCCGTGACGCTCCAAATTAACCTGTTAATCGATACTAGTCCCAGGAAACAGTGCTGGTATCACAGGAAGACAGGATATCACAGCAATAGAGGTCTCTTTATTATAGAGTAGGAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGGAAGCGGAAGCCAAGACTTGGGCCAGACAACACAGGCGCGACTTGGGAACTAGGCCGAAACCCTAAAACTCATCGTAGCCGGCTTGCTCCTGGAAGAACTCCTTGTCAGCGGGATCCGCTTCATCTTCTTCAGCAACTGGGGGGGTTATTTATATAGAGCAAAGGTGAGTACAGGAGTACTCAGCAAGCCATGGGAAATAAGTGTTTAATGAAGGCTTCAAGGAAAGGCTGTTGTTTTTGGAATTGATTTTATTTGAACTCTCTTATCTAAAAACAACTAAGTGAGTGCTTCTCAAACGACACGGATAAGACAGTGCGTCTCGTCCGGTCGGAGTATGTGCAAAGGTATCAGTCTTTAGAATTGAAATAAGGTTGGCACCCGGCCAATAGCTTTTCAAACGGCCACCCGGGCCAACAACTTTCAAACGGCCACCCGGGCCTAGCTGATCCCATCAGCTGCAGATTTTCCAAACATCGATCCCCTTTCCACAACAGCAATTTCACAAGCAGTAGTCAAACAAAACTACGCTAGGAATCACCTCACATCCGCCCATGACCGTGGGCACGGCTGTTCGAACAGTTTAATAACCTCTGCAGAGGGGGGTACACTTTACCCACACGACACTACTAACCCAGATCACCCAGCCCGTGGGGATCAGCCACGTCGGGAGACCTCCAAGCTTTCATGACAAGGCATTTCGAAAGCCGACAAAGGTTTACCATATGCCGACGAGAGGGGTCCCAGGCCAACAACAGGTTAGGTCCCAGACCGTACTGTGCCAGAAAGCCCAGGGGTCCTCCCCGACACCACCCCGGCGAATCCACATGTCTCTCGGCATCAAGGCTCCCCTGATAAGCTAGTTACTCAGCCAGGGGTGTCCTATTCCACCCATGTGGTCGTACTTGTCTTATGTTCGGATGAAATTCCAAGGAAACGGTCCTTAAGTGCAAGAGCGGGAAACCGTACACCCGGTACGTTCCCCGGTCCGCGGTTTTGGAAAATTCATTTAGTTCGCAAGCACCGACCCAGGTGTCGGGTTTTCCAAGTCTTTTGTAAAACCCAAGTTTTACCCAAGATGTTTTTACGATTTTAAGTTTGAAGGCGGCCGTCGATACTCGTGCAGAGTGCACGATTTCCGAGGCGCAACTGGGTGGGTACAAGGGAACATGGTATAACAATTAACAAAGGAAGGTTAATATGCAACAAACTAGGTAGGTCTGCCAATCTGCCTTGCAGACGGGACAACAGATTAAGTGCGATCCTATCAATGCATAATATTTTTCAAGCAACATAATTAAATTTCAAATATAGGTTCAAGATGTTCAAAGGTGGCTTGCCTTGCTCGAGATCTGGAGCTTGATCCTCGAAATCCCCGCACTGCGGGTCTTCAGGCTCCGAAACTACACGCGAAACGGGACAGCTCAACAAACGGCGAAAAAAAAATAAAGCCCTATTAATGACCCCTAAGCATGCCATTAGATAGATCTCGAGATTTGAGGAATTTTGGAAGTTGAACGGAGTCAAACGGATTTACGGTTGGGAAGATATTGAATTTCTAAGATTATTGGATTTTTGGTCTAAAGGAGAAAGAATTTAATTAAATCCTTTTTGAAAAAGAAAAGAAAAGAAAAGAAAAGAGGGAGGGAATATAGACTTTTCTCGGGCGGCTAGGGCGCGGCCCAAGAGAAATGGAGCGGTCCGGCCGAGCTAAATGGGCCGGCCGGCCCAAGGCGGCCCAAGACGCGCGCGCGCGGGAGGGGAGGAGAGAGAGAGCCGGTGGACCGGGCTCACCACGCGCGGTCCCGGGTGGGACCCGCTTGTCGGTGACACGGTTCACCGTGCGGAGCGAGCACGCGGCGCACGCGCGCGGGCGGGGGAGGGATGCGGTGCACGCGCGTGGTTCGCGGAGGAACGGATGCGGCGGGCCCAGGCGCAGCCTCACGGCTCGCGGTGGAACGCGCGCACGGGAGGGGCTGACCGGGGTCGGCCCGACCCGATCTCGGCCGAGCTGGCGCCGACATGGCGCCGACGTGGCTGCCACGCGGGCTGGCGGGAGGAAGACGAAGGCGCCGGCCGCGAATGGACGGCAGGCGGCGGCGGTTTCTCCGGGACGCCTTGCGACGATGAGGGGCGACGGGGCGTACACCGGGATGACGAGGGAGAATGAGAGGGAGCGAGCCAACGGCTTGGATTCGCCGGAGGGAGTCCGTCAGCGACGGATTGTGGCTGCGGCAACCGGCGGAGAGAAAAGGGGGAAACGGCGACGAGGTCACGAGGGGCCAATTCCCGGCGGTGAGAGCATCTACGCGGCTTCGGGAATCCGTTGCTAGCGTCGGATTGAGCGGAGCTATGCCGAGCGAGGCCGGCGACGAGCGGGTGCTACGGTGCACGGGCGGCGACGGCGGCGAGCGGCGGCAACGGTCGGGGCGGCGCCGGCTAGCTACGGGGAGGCTACTCGTGCTACTACCGAAAACTAAGGGGAGAGATCGAGCGGGGAGGAAGAACGGAGGGAGGCACTACCGAGATGAGGAGGGGCGCTGTGACGAGAGGCCGACGGCGCGGGAGTGATCTCTCCGGCCTCGGGCCGGGGAAGAGGAAGGAGAGGGCGCGCCCGGAGTACCCTTCCGCGTCCACGAACGCACCGGCTCTCCCGGCGCTTGGCGATGAACGGCGGAGGCAAGATTGAGCTCGGAAGGCGGCGGCAACAATGGAGTGGAGGCGATGGGACAACGAGAGGAGAAGAGAGGGAGGGCGCCCGGGGCTTTAAGGGCGGCAATGTCGGTTTGGAAACTGACTTTGGGCGGTCAAGGCGCGAGCTGGCGCTTGGCGCTCGCGGCCAAATCGGCGACAGGGCGGAGGGAGGATGACGCCGGCGGGAGGAAAAGGGGAAAAGGAGGGAGAGAAAGGGGGCTCGCCCCTTTCTTCTTTGGGAAAAGGAGGAGGGGAGCGGGGGCGTCGCGGCAGAGGGAGGAGGGGCTCTGCCTCCGTCCCTTGGCGGCTTGCGCGCGGAGTGGCGGGGCCGAGGCGATGACGACGGCAATGACGGCGGGGCGGTTTGGAGCGGAGCGGCGACACGGGCGACAGGTGCGAGCAGGCGCGGCAGAGGGTGACGGCGGCGGCGACCAGGCGGTCGGCCACCACGGCACGCGCGCGCGGGATGCAACGGGAGGCGCGGCGGATTGAGTGGCGCGGCTCGGGCACGCGTGCTGGCTGCGGGGCCGAGCGGCTGCGCGGCTGCAGGCGGCAGGGCAGCGGGAACGGGTGACGCGGACGGCGCAGACGGCGCGGCACGGGCGGCAACCCCGCGGGCGCGCGCGCGAACAACGGCGCGCGGTGGTCGGCTTCGCGGGCGAGGAGCTCGCCAGGGATGGGGAGAAGGAGAGCGAGGGGGAAGGGGGCGCTCGGCGCGGCGCTCGCGCACACGCGCGCGGCGCGCGGGCGGAGCGGAGGGGGAGGAAGAGAGGGAGAGAGAGAGAGAGGGAAAGAGAGAGAGAGAGAGCGCCGGGAGGGAGGGGAGATGGGCCGAGAGAGATTCGGCCCATCGACCCTGGGGGAGGCAAAATAGACTTTTGCGGAGGGATTTGATTTGGAAGGATTTGGATTCGGAATTGAACTCGACGATAGATCGGGGATTTGAGATCTTGAGAAGGCACGGACACTAGACAACAAGCAAAAAAACAAATTTCGCAATTAGGGTTTTTAAGAGATAATTTTCCCGCTAGGCGCCACGACGGAACGGGCGCTACACTTATATTGTGAAATGGGGGAAGTAGAAATTATTACAGACGTTGTGGGTCAAAAATTACAACTTATAAAATAACAGCTTAATTAAAAACAGAAAACTTCTCAAACAACTACTCCGTAGTTAAAAGTTAAAATGGCTTGCAATATTTATTATAAAACGGCCGGGGAGAGTAGTTTTCTAACGCCACGCACGCGATGCATAAGATTGTATATATGTACTACCGGGGTGTTGTAACATCCCGGCCTAGGGCTTAATAGGATTAATAGAATACTCATATCAACAAGTTGCAACTTCTTTTCCGGAATCCAATCTCCAAAGAACTCCAGGGCTAAGTGTGCTTGGCCTGGAGCAATTTGGGATGGGTGACCGACCGGGAAATTCTTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGAGGGCAGTCTATGACCTATGAGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGTGGGCAGTCTATGACCTATGAAAGCTATCAGATGTAAGCGGGTCCGGCCTGGGGAAAGCTATCAGATATAAGCGGGTCCGGCCTGGGGGAAGGCGGGATGTTACAGGTGTTTGGTTGCCAATCATACTTTGTCGTAATTTACTTCGCTTAGGCAGGTTTGATCACATTGATGGCTGTTTGGTTGTAGCCACTATTGTGGCAAGATTTTCTTCCTATAAATTAGGTCCATATGTTATTAACTTGAAAAAGTGTGGTATGATTTTCTTAGGCTTATTAAATTGTGGCTAAGAATTTGATCACCTCAAATTAGATAAGTGTAACAATATTTATTGATAAAGTATGACTAGTAACCAAACGTGCATGCATACCCTAACATCCACTTGTTGTTGTTATATGATAGGTAGCGCGTGCGCCGAGACCTTGTGCTTGGCGTTTGAACGCTTCAAAGTCCCATAAACGATCGATACTCTATTAGTCAAGTGGATGCATCGAGCTAGGCTATAGTTTCAATTTAATCACTGTTTTCCCACTTCCCAGCTAGTACCGCTATATTATATTACATGTGGCTGAATTTATAAAGTGAGTGGCCATGTTGTCCTCGTGCAGCTGCAGCGTTAGGAAGACTATATGATTATTGGACTCGCACACTTTGGAGTTGGTAGAATGCAATCCTTCTTTTTTATTTCAAAAAAAGTTCAGTGGATGTGTTTATCTGACAGGCTAACAGCTATATTTGGAAACTCAAAATCCCCTTAAAGATATATATCTTTTCTGAAATGGTTAATTTAGTGGCACATAAAGAAAACGGTAAACTTTTCTTGGCATATAAGAAACCGGTTGAACCATTTTTAAGGTGACTAGTTAAAATATTAGTTCGCTCCAATTAATGGACCTCGGGTGATCCGGTTTTATAAATTGAGTGACCTATATTTTGATTTAGGAACGTATTTTAGACTCGGCGACAAATTAAGGGACCTGAAGTGTACTTACCAAAAGTTATGACGTTACGTGAACAAAATGGGCTTAATATGGCTAGTATGAAAATGTGGGCCTTAACGGGCCTACTTGAAAACGCCAATCGGTCGTACAAGGGATGCATGTAGGACGAAAGGAGTAAGTTCACCGGAGGTTCCTCAACTTAACAACGAGATTATTTAAGATCCCTTAACCACAAAATCAGAAATGTTTACCCCTAAATTACTAAAACCGTTCACTCAAGGTCCTATAGCAGTATATATGAGTGGTTTCACTGACGTGACATCCTAGTTAGCAATTTTTTTTAAAAAAAGTATGTGGGGCCCACATGTCAGCCGCACATTTTTTTTTTCTTCTCTTCTCTTCTCTCTCTTCTTTCTTTCTCTTAGCGTGCGGATGTGGGTGGCGCAGCGTAGGGCGATCGCGGCAGCGGAGAGGCGGCGGGCGCGAGCGCGGCGGCAGGCAAAGAAGCGGAGGGTGAGCGCGGCGGCGGAGGGCGAGCATGGCACACGATTAACTGCATGATGCATGCACACTGTGTAGTATGAACATGACCGATTGATTTAATTTGGGTACCTTCTCCGGTACGTGCTGCTGCTATCGGTCAAGTAGACGTCGCCGGTCCTCTGGTCGACGTCGAAGCCGTTGAGGAAGAACAGAAAAGGTTCTTTTGTGTGGTGCCGCAAAGCCTGCGTGTGTTTGCTCTTGTTGTGTGCAATCGTGTAGTGCAAAATCTGTGTAAGAATAAGTGTGTGCGTCCACGATGTTAGAATAAATGGACTAGTAAATTAGCTAGTAAAATACTTTCCGGTTGAGGAAGTTGAACGGCACATCGATGGCCTCCGTCGTCACCACCTTGGCCAGCCCGCCGCGCGCCGGCACCCTCAGGAGGCCCAGATACGCGTCGGCCACGTACAGGTCGCCAGAGGCGTGGTGGAACTGCAGCCCCAACGGCCGCCCGCACACGCTCTCCGGCACCACCAGCTTCTTCTCCGGCGAGCAAACGCTGACGCTCCTGGTGGTGAACAAATCGTCAGTGCATGCTTACTTACGGGCGCCGGCAGCGTCATGGCGGCGGAGGGAAAGGCGGAGAGGAGGCAGCCGGCGACGGCGAGCTCGGCGGCGGCGAGCTCTCCTTCCGACACATCGCATACAGAGCGACGAGCGCCGAACTGGCCGAGGCGTAGAAGGCCAGCAGCGGCGCGGTCTTTATCCCGTAGGCGTGCGCAGCGCGAGCAGGGACTCGTCGCCACCATGGCCGACTACGGCGACTCGTCCCCGCACTCTGCCGCGGCCATCGACGGCGCACCACCATGGAGACGGTGAACCAGTTGGAGAGGAGGAAGACGGCGACTCCCAGGCTCCCACACCTCCTGAGCAAGCCGAACGACACGGCGTAGTTGTCCCTCTTGATGTCGCTGTTGCCGCAGAGCACGCAGAGGCCGAGCACGAGGATGGGAAGACGATGTAGTTGACGAGGAGAAAGAAGGGGCTCGCGAGCATGACGGGGAGGACGGAGTGGTAGTAGTCGGTGACGAACCCGAGCTCGTTGTCGATCACCTGGAACAGCGTCGCCGCCACCGTCGCCCTATCGGAGAGGGGGGCGCCGGCCGCCTTTGTCTCCACCTCCGCTGCTCCCGAGGGTGGGGGCGGCAGGATCCGCGAGCCGGCGGCGCCCACCCCCTCTCCCGCCGGCCTCAT
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CDS seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVERQRLLAGEEAGGAGERFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLASAVHRQASTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY
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Protein seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVERQRLLAGEEAGGAGERFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLASAVHRQASTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_04G0562800 | OsZS97_04T0562800.1 | Chr04 | 36902767 | 36910689 | - | makerRMon | ||
CDS seq | ATGAGGCCGGCGGGAGAGGGGGTGGGCGCCGCCGGCTCGCGGATCCTGCCGCCCCCACCCTCGGGAGCAGCGGAGGTGGAGACAAAGGCGGCCGGCGCCCCCCTCTCCGATAGGGCGACGGTGGCGGCGACGCTGTTCCAGGTGATCGACAACGAGCTCGGGTTCGTCACCGACTACTACCACTCCGTCCTCCCCGTCATGCTCGCGAGCCCCTTCTTTCTCCTCGTCAACTACATCGTCTTCCCATCCTCCGACATCAAGAGGGACAACTACGCCGTGTCGTTCGGCTTGCTCAGGAGGTGTGGGAGCCTGGGAGTCGCCGTCTTCCTCCTCTCCAACTGGTTCACCGTCTCCATGGTGGAGCGTCAGCGTTTGCTCGCCGGAGAAGAAGCTGGTGGTGCCGGAGAGCGTTTCCACCACGCCTCTGGCGACCTGTACGTGGCCGACGCGTATCTGGGCCTCCTGAGGGTGCCGGCGCGCGGCGGGCTGGCCAAGGTGGTGACGACGGAGGCCATCGATGTGCCGTTCAACTTCCTCAACCGGAAAATTTTGCACTACACGATTGCACACAACAAGAGCAAACACACGCAGGCTTTGCGGCACCACACAAAAGAACCTTTTCTGTTCTTCCTCAACGGCTTCGACGTCGACCAGAGGACCGGCGACGTCTACTTGACCGATAGCAGCAGCACGTACCGGAGAAGAGTATCGATCGTTTATGGGACTTTGAAGCGTTCAAACGCCAAGCACAAGCCGCGCAGCCGCTCGGCCCCGCAGCCAGCACGCGTGCCCGAGCCGCGCCACTCAATCCGCCGCGCCTCCCGTTGCATCCCGCGCGCGCGTGCCGTGGTGGCCGACCGCCTGGTCGCCGCCGCCGTCACCCTCTGCCGCGCCTGCTCGCACCTGTCGCCCGTGTCGCCGCTCCGCTCCAAACCGCCCCGCCTCAGTTTCCAAACCGACATTGCCGCCCTTAAAGCCCCGGGCGCCCTCCCTCTCTTCTCCTCTCGTTGTCCCATCGCCTCCACTCCATTGTTGCCGCCGCCTTCCGAGCTCAATCTTGCCTCCGCCGTTCATCGCCAAGCTAGCACGAGTAGCCTCCCCGTAGCTAGCCGGCGCCGCCCCGACCGTTGCCGCCGCTCGCCGCCGTCGCCGCCCGTGCACCGTAGCACCCGCTCGTCGCCGGCCTCGCTCGGCATAGCTCCGCTCAATCCGACGCTAGCAACGGATTCCCGAAGCCGCGTAGATGCTCTCACCGCCGGGAATTGGCCCCTCGTGACCTCGTCGCCGTTTCCCCCTTTTCTCTCCGCCGGTTGCCGCAGCCACAATCCGTCGCTGACGGACTCCCTCCGGCGAATCCAAGCCGTTGGCTCGCTCCCTCTCATTCTCCCTCGTCATCCCGGTGTACGCCCCGTCGCCCCTCATCGTCGCAAGGCGTCCCGGAGAAACCGCCGCCGCCTGCCGTCCATTCGCGGCCGGCGCCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTCGGCGCCATGTCGGCGCCAGCTCGGCCGAGATCGGGTCGGGCCGACCCCGGTCAGCCCCTCCCTTGCGCCTCGGAAATCGTGCACTCTGCACGAGTATCGACGGCCGCCTTCAAACTTAAAATCGTAAAAACATCTTGGGTAAAACTTGGGTTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAATTTTCCAAAACCGCGGACCGGGGAACGTACCGGGTGTACGGTTTCCCGCTCTTGCACTTAAGGACCGTTTCCTTGGAATTTCATCCGAACATAAGACAATACACGTACGACAAGATGCATGAAGAGTTGTTGGCGACGATCGACGAGATGCACGTTGAGGTTCAGGGAACGATGGTGTATCAATTAAAGTTGGCGACTGATCGACCGGACGAAGCGGCCAACAAGTATCATGTGGGGGTTCATCGCATGCCGCATGATCGACACATGCATGCATGCATGCACCACGTGATATATTGTACATCGATCGGTGTCATCATGAATCTCGATGTGGTACACGCACGCACCAGTCCAAATAAGTACTCCTATCTAAAGTACTAG
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Protein seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVERQRLLAGEEAGGAGERFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLASAVHRQASTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.048037 | 6.627797 | 0.0361925 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g59300 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0031920 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0032690 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0032260 | RBH | 0.0 | 1.768901 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0032120 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0032390 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0556800 | RBH | 0.0088645 | 0.9976015 | 0.0922595 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0031000 | RBH | 0.0 | 0.000000 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0031470 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0031290 | RBH | 0.0 | 0.000000 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0031400 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0031990 | RBH | 0.0 | 0.000000 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0031950 | RBH | 0.0 | 3.728535 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G031460 | RBH | 0.0 | 0.713568 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0031200 | RBH | 0.0 | 0.000000 | 0.0 |
Os XI: R9311 | R9311 | AGIS | R9311C04g18078 | RBH | None | None | None |
Os XI-adm: HZ | HZ | PKU | NA | NA | NA | NA | NA |
Os XI-adm: J4155S | J4155S | PKU | NA | NA | NA | NA | NA |
Os XI-adm: LK638S | LK638S | PKU | OsLK638S_04g0317800 | SBH | None | None | None |
Os XI-adm: XL628S | XL628S | PKU | OsXL628S_04g0384900 | SBH | None | None | None |
Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0407876200.01 | RBH | None | None | None |
Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0417400400.01 | RBH | None | None | None |
Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_017885 | RBH | None | None | None |
Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0414882400.01 | RBH | None | None | None |
Os XI-1A: D62 | D62 | SICAU | OsD62G0416709800.01 | RBH | None | None | None |
Os XI-1A: DG | DG | SICAU | OsDGG0408744200.01 | RBH | None | None | None |
Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0409970200.01 | RBH | None | None | None |
Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0412484600.01 | RBH | None | None | None |
Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0408722800.01 | RBH | None | None | None |
Os XI-1A: G46 | G46 | SICAU | OsG46G0408683600.01 | RBH | None | None | None |
Os XI-adm: G630 | G630 | SICAU | OsG630G0407784000.01 | RBH | None | None | None |
Os XI-1B: G8 | G8 | SICAU | OsG8G0409395800.01 | RBH | None | None | None |
Os XI-1A: II32 | II32 | SICAU | OsII32G0416489800.01 | RBH | None | None | None |
Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0410191600.01 | RBH | None | None | None |
Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0410080800.01 | RBH | None | None | None |
Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0407871800.01 | RBH | None | None | None |
Os GJ-adm: LJ | LJ | SICAU | OsLJG0407868600.01 | RBH | None | None | None |
Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0409958200.01 | RBH | None | None | None |
Os XI-1B: R498 | R498 | SICAU | OsR498G0409533000.01 | RBH | None | None | None |
Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
Os XI-1B: S548 | S548 | SICAU | OsS548G0421315200.01 | RBH | None | None | None |
Os XI-2: TM | TM | SICAU | TMG0412525800.01 | RBH | None | None | None |
Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0407777400.01 | RBH | None | None | None |
Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0407805800.01 | RBH | None | None | None |
Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0409536200.01 | RBH | None | None | None |
Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0409712200.01 | RBH | None | None | None |
Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0412205400.01 | RBH | None | None | None |
Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0406027900.01 | RBH | None | None | None |