Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsY58SG0409712200.01 | OGI:04103170 | 44/50 | Os XI-1B: Y58S | Y58S | SICAU | Chr04:36659161-36667716 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | G630_Y58S_DEL0401070,Nipponbare_Y58S_TRA0401360,Nipponbare_Y58S_INS0435550,Nipponbare_Y58S_INS0440750,125827_Y58S_TRA0438860,125827_Y58S_DEL0443310,125827_Y58S_INS0447110,Kosh_Y58S_INS0443050,Kosh_Y58S_DEL0446350,G8_Y58S_DEL0428350,NamRoo_Y58S_INS0401220,NamRoo_Y58S_INS0445780,NamRoo_Y58S_INS0452040,KY131_Y58S_INS0442220,KY131_Y58S_TRA0445610,ZH11_Y58S_INS0401200,ZH11_Y58S_INS0442240,ZH11_Y58S_TRA0445450,R527_Y58S_DEL0424280,S548_Y58S_DEL0424160,Basmati1_Y58S_INS0435810,Basmati1_Y58S_INS0442350,117425_Y58S_INS0440630,117425_Y58S_INS0443670,02428_Y58S_INS0412790,02428_Y58S_INS0448150,II32_Y58S_DEL0428660,132278_Y58S_INS0412430,132278_Y58S_INS0448070,132424_Y58S_DEL0443920,D62_Y58S_DEL0425860,127564_Y58S_DEL0448350,Azucena_Y58S_INS0410440,Azucena_Y58S_INS0436040,Azucena_Y58S_INS0445890,128077_Y58S_INS0437780,128077_Y58S_INS0443410,128077_Y58S_INS0443750,CN1_Y58S_DEL0400930,CN1_Y58S_DEL0438950,117534_Y58S_DEL0401770,117534_Y58S_TRA0437940,117534_Y58S_DEL0443320,XL628S_Y58S_DEL0440830,YX1_Y58S_DEL0423630,DHX2_Y58S_INS0436180,DHX2_Y58S_INS0441720,DHX2_Y58S_INS0442080,Lemont_Y58S_DEL0401760,Lemont_Y58S_INS0440940,Lemont_Y58S_INS0446800,Lemont_Y58S_INS0447080,ZS97RS3_Y58S_DEL0430030,R9311_Y58S_DEL0427420,IR64_Y58S_DEL0438400,OglaRS2_Y58S_INS0440240,OglaRS2_Y58S_INS0453620_1,OglaRS2_Y58S_INS0462140_1,R498_Y58S_DEL0425360,WSSM_Y58S_DEL0422640,DG_Y58S_DEL0441180,HZ_Y58S_DEL0420390,127652_Y58S_INS0437180,127652_Y58S_TRA0439340,LJ_Y58S_INS0438750,LJ_Y58S_INS0445630,LJ_Y58S_INS0445920,127742_Y58S_DEL0419800,
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| DNA seq | CCCAGCACCGCCTTGTCGAGCCCAAACAATGCTTAATAGAGGATATAAAGAGCGAATAGAGAAAGATGAAGTGGAAGGAGGGTTAGAAGGAATCGCTCGTCCATGCTGGTAGCTCAACTCTTCACACCACGTGTGTGAAAAATGAAAGAAAAATATAGCTGAAAGGGTGACCATTTCTAAAAGTGGTAAATAATTTAATATCCTCGTAAGTTTTAAACCACATGTGCTTCGAAGGCCACCCATTTTTAAATGTGTCTGCTCCCAACGGATAGACAACCTATTTATGGATATGTGCTATCCGAATTAACAAGAACCCCAAAACATCTCCCAAAAGATCCCATGCATCCTACCTCCTCTTGTCTATTTTTAACAACAACCCTCCTCCCCTCCCCCTCCTCCAAACTGTCATGCGGTTCCTCTAACTATGGATGGAAGTTGTTTTTTTGGTATTCAAGTAGTTTTCTTGTTTTTAATTAAGTTATTATTTTATAAGCCGCAATGCTCGATCTAACTGTAGTTTTTTAAAGCAAATGCCCGGAATGAATTCTACTATTAAGAACCCATTAAGAAAATAATATACTTGCTGCTTTTAAGTTCTTTATGTACGTGCTACTTTAGATAATTGTAGTACTACTAGTACTTTAGATAGGAGTACTTATTTGGACTGGTGCGTGCGTGTACCACATCGAGATTCATGATGACACCGATCGATGTACAATATATCACGTGGTGCATGCATGCATGCATGTGTCGATCATGCGGCATGCGATGAACCCCCACATGATACTTGTTGGCCGCTTCGTCCGGTCGATCAGTCGCCAACTTTAATTGATACACCATCGTTCCCTGAACCTCAACGTGCATCTCGTCGATCGTCGCCAACAACTCTTCATGCATCTTGTCGTACGTGTACTGTGCGCGCGTGAGTCGACCTTATCGAGGGCTGATGAATTACAGGTACGGTGGTGGATCCATCAGGAAAAAGATCTTGTTTTCTTTAACCCTTGTGAGGCAGACGCATATGTTGGTACTAGGTGTGGACAATTACATAGCTTATACTTCCTCCGTCCTGAATATTTAAAGGCATTGACTTTTTTAAATATATTTAACCATTCATTTTATTTAAATAATTATTTATTCTTTTCTTATCATTTGATTCATTGTTAAATATTTGAATAAGACGAACGGTCAAACATGCTTAAAAAAGTCAATGGCGTCAAATATTTAGGGATGGAGAGAGTATAAGATTACTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCACATTCATATTGATGTTAATGAATCTAGATATTTCACAATATAAGTCATTCTAGCATTTCTCATATTTATATTGATGTTACATATCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTATTGTCACGCCCCGAACTAGTACCGATCGGAACTAGCCCGTGACGCTCCAAATTAACCTGTTAATCGATACTAGTCCCAGGAAACAGTGCTGGTATCACAGGAAGACAGGATATCACAGCAATAGAGGTCTCTTTATTATAGAGTAGGAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGGAAGCGGAAGCCAAGACTTGGGCCAGACAACACAGGCGCGACTTGGGAACTAGGCCGAAACCCTAAAACTCATCGTAGCCGGCTTGCTCCTGGAAGAACTCCTTGTCAGCGGGATCCGCTTCATCTTCTTCAGCAACTGGGGGGGTTATTTATATAGAGCAAAGGTGAGTACAGGAGTACTCAGCAAGCCATGGGAAATAAGTGTTTAATGAAGGCTTCAAGGAAAGGCTGTTGTTTTTGGAATTGATTTTATTTGAACTCTCTTATCTAAAAACAACTAAGTGAGTGCTTCTCAAACGACACGGATAAGACAGTGCGTCTCGTCCGGTCGGAGTATGTGCAAAGGTATCAGTCTTTAGAATTGAAATAAGGTTGGCACCCGGCCAATAGCTTTTCAAACGGCCACCCGGGCCAACAACTTTCAAACGGCCACCCGGGCCTAGCTGATCCCATCAGCTGCAGATTTTCCAAACATCGATCCCCTTTCCACAACAGCAATTTCACAAGCAGTAGTCAAACAAAACTACGCTAGGAATCACCTCACATCCGCCCATGACCGTGGGCACGGCTGTTCGAACAGTTTAATAACCTCTGCAGAGGGGGGTACACTTTACCCACACGACACTACTAACCCAGATCACCCAGCCCGTGGGGATCAGCCACGTCGGGAGACCTCCAAGCTTTCATGACAAGGCATTTCGAAAGCCGACAAAGGTTTACCATATGCCGACGAGAGGGGTCCCAGGCCAACAACAGGTTAGGTCCCAGACCGTACTGTGCCAGAAAGCCCAGGGGTCCTCCCCGACACCACCCCGGCGAATCCACATGTCTCTCGGCATCAAGGCTCCCCTGATAAGCTAGTTACTCAGCCAGGGGTGTCCTATTCCACCCATGTGGTCGTACTTGTCTTATGTTCGGATGAAATTCCAAGGAAACGGTCCTTAAGTGCAAGAGCGGGAAACCGTACACCCGGTACGTTCCCCGGTCCGCGGTTTTGGAAAATTCATTTAGTTCGCAAGCACCGACCCAGGTGTCGGGTTTTCCAAGTCTTTTGTAAAACCCAAGTTTTACCCAAGATGTTTTTACGATTTTAAGTTTGAAGGCGGCCGTCGATACTCGTGCAGAGTGCACGATTTCCGAGGCGCAACTGGGTGGGTACAAGGGAACATGGTATAACAATTAACAAAGGAAGGTTAATATGCAACAAACTAGGTAGGTCTGCCAATCTGCCTTGCAGACGGGACAACAGATTAAGTGCGATCCTATCAATGCATAATATTTTTCAAGCAACATAATTAAATTTCAAATATAGGTTCAAGATGTTCAAAGGTGGCTTGCCTTGCTCGAGATCTGGAGCTTGATCCTCGAAATCCCCGCACTGCGGGTCTTCAGGCTCCGAAACTACACGCGAAACGGGACAGCTCAACAAACGGCGAAAAAAAAATAAAGCCCTATTAATGACCCCTAAGCATGCCATTAGATAGATCTCGAGATTTGAGGAATTTTGGAAGTTGAACGGAGTCAAACGGATTTACGGTTGGGAAGATATTGAATTTCTAAGATTATTGGATTTTTGGTCTAAAGGAGAAAGAATTTAATTAAATCCTTTTTGAAAAAGAAAAGAAAAGAAAAGAAAAGAGGGAGGGAATATAGACTTTTCTCGGGCGGCTAGGGCGCGGCCCAAGAGAAATGGAGCGGTCCGGCCGAGCTAAATGGGCCGGCCGGCCCAAGGCGGCCCAAGACGCGCGCGCGCGGGAGGGGAGGAGAGAGAGAGCCGGTGGACCGGGCTCACCACGCGCGGTCCCGGGTGGGACCCGCTTGTCGGTGACACGGTTCACCGTGCGGAGCGAGCACGCGGCGCACGCGCGCGGGCGGGGGAGGGATGCGGTGCACGCGCGTGGTTCGCGGAGGAACGGATGCGGCGGGCCCAGGCGCAGCCTCACGGCTCGCGGTGGAACGCGCGCACGGGAGGGGCTGACCGGGGTCGGCCCGACCCGATCTCGGCCGAGCTGGCGCCGACATGGCGCCGACGTGGCTGCCACGCGGGCTGGCGGGAGGAAGACGAAGGCGCCGGCCGCGAATGGACGGCAGGCGGCGGCGGTTTCTCCGGGACGCCTTGCGACGATGAGGGGCGACGGGGCGTACACCGGGATGACGAGGGAGAATGAGAGGGAGCGAGCCAACGGCTTGGATTCGCCGGAGGGAGTCCGTCAGCGACGGATTGTGGCTGCGGCAACCGGCGGAGAGAAAAGGGGGAAACGGCGACGAGGTCACGAGGGGCCAATTCCCGGCGGTGAGAGCATCTACGCGGCTTCGGGAATCCGTTGCTAGCGTCGGATTGAGCGGAGCTATGCCGAGCGAGGCCGGCGACGAGCGGGTGCTACGGTGCACGGGCGGCGACGGCGGCGAGCGGCGGCAACGGTCGGGGCGGCGCCGGCTAGCTACGGGGAGGCTACTCGTGCTACTACCGAAAACTAAGGGGAGAGATCGAGCGGGGAGGAAGAACGGAGGGAGGCACTACCGAGATGAGGAGGGGCGCTGTGACGAGAGGCCGACGGCGCGGGAGTGATCTCTCCGGCCTCGGGCCGGGGAAGAGGAAGGAGAGGGCGCGCCCGGAGTACCCTTCCGCGTCCACGAACGCACCGGCTCTCCCGGCGCTTGGCGATGAACGGCGGAGGCAAGATTGAGCTCGGAAGGCGGCGGCAACAATGGAGTGGAGGCGATGGGACAACGAGAGGAGAAGAGAGGGAGGGCGCCCGGGGCTTTAAGGGCGGCAATGTCGGTTTGGAAACTGACTTTGGGCGGTCAAGGCGCGAGCTGGCGCTTGGCGCTCGCGGCCAAATCGGCGACAGGGCGGAGGGAGGATGACGCCGGCGGGAGGAAAAGGGGAAAAGGAGGGAGAGAAAGGGGGCTCGCCCCTTTCTTCTTTGGGAAAAGGAGGAGGGGAGCGGGGGCGTCGCGGCAGAGGGAGGAGGGGCTCTGCCTCCGTCCCTTGGCGGCTTGCGCGCGGAGTGGCGGGGCCGAGGCGATGACGACGGCAATGACGGCGGGGCGGTTTGGAGCGGAGCGGCGACACGGGCGACAGGTGCGAGCAGGCGCGGCAGAGGGTGACGGCGGCGGCGACCAGGCGGTCGGCCACCACGGCACGCGCGCGCGGGATGCAACGGGAGGCGCGGCGGATTGAGTGGCGCGGCTCGGGCACGCGTGCTGGCTGCGGGGCCGAGCGGCTGCGCGGCTGCAGGCGGCAGGGCAGCGGGAACGGGTGACGCGGACGGCGCAGACGGCGCGGCACGGGCGGCAACCCCGCGGGCGCGCGCGCGAACAACGGCGCGCGGTGGTCGGCTTCGCGGGCGAGGAGCTCGCCAGGGATGGGGAGAAGGAGAGCGAGGGGGAAGGGGGCGCTCGGCGCGGCGCTCGCGCACACGCGCGCGGCGCGCGGGCGGAGCGGAGGGGGAGGGAGAGAGGGAGAGAGAGAGAGAGGGAAAGAGAGAGAGAGAGAGCGCCGGGAGGGAGGGGAGATGGGCCGAGAGAGATTCGGCCCATCGACCCTGGGGGAGGCAAAATAGACTTTTGCGGAGGGATTTGATTTGGAAGGATTTGGATTCGGAATTGAACTCGACGATAGATCGGGGATTTGAGATCTTGAGAAGGCACGGACACTAGACAACAAGCAAAAAAACAAATTTCGCAATTAGGGTTTTTAAGAGATAATTTTCCCGCTAGGCGCCACGACGGAACGGGCGCTACACTTATATTGTGAAATGGGGGAAGTAGAAATTATTACAGACGTTGTGGGTCAAAAATTACAACTTATAAAATAACAGCTTAATTAAAAACAGAAAACTTCTCAAACAACTACTCCGTAGTTAAAAGTTAAAATGGCTTGCAATATTTATTATAAAACGGCCGGGGAGAGTAGTTTTCTAACGCCACGCACGCGATGCATAAGATTGTATATATGTACTACCGGGGTGTTGTAACATCCCGGCCTAGGGCTTAATAGGATTAATAGAATACTCATATCAACAAGTTGCAACTTCTTTTCCGGAATCCAATCTCCAAAGAACTCCAGGGCTAAGTGTGCTTGGCCTGGAGCAATTTGGGATGGGTGACCGACCGGGAAATTCTTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGAGGGCAGTCTATGACCTATGAGAGTGAGGACAAAGTGTGCTGAAAAGACATGTGTTGGTCTGTGTGGGCAGTCTATGACCTATGAAAGCTATCAGATGTAAGCGGGTCCGGCCTGGGGAAAGCTATCAGATATAAGCGGGTCCGGCCTGGGGGAAGGCGGGATGTTACAGGTGTTTGGTTGCCAATCATACTTTGTCGTAATTTACTTCGCTTAGGCAGGTTTGATCACATTGATGGCTGTTTGGTTGTAGCCACTATTGTGGCAAGATTTTCTTCCTATAAATTAGGTCCATATGTTATTAACTTGAAAAAGTGTGGTATGATTTTCTTAGGCTTATTAAATTGTGGCTAAGAATTTGATCACCTCAAATTAGATAAGTGTAACAATATTTATTGATAAAGTATGACTAGTAACCAAACGTGCATGCATACCCTAACATCCACTTGTTGTTGTTATATGATAGGTAGCGCGTGCGCCGAGACCTTGTGCTTGGCGTTTGAACGCTTCAAAGTCCCATAAACGATCGATACTCTATTAGTCAAGTGGATGCATCGAGCTAGGCTATAGTTTCAATTTAATCACTGTTTTCCCACTTCCCAGCTAGTACCGCTATATTATATTACATGTGGCTGAATTTATAAAGTGAGTGGCCATGTTGTCCTCGTGCAGCTGCAGCGTTAGGAAGACTATATGATTATTGGACTCGCACACTTTGGAGTTGGTAGAATGCAATCCTTCTTTTTTATTTCAAAAAAAGTTCAGTGGATGTGTTTATCTGACAGGCTAACAGCTATATTTGGAAACTCAAAATCCCCTTAAAGATATATATCTTTTCTGAAATGGTTAATTTAGTGGCACATAAAGAAAACGGTAAACTTTTCTTGGCATATAAGAAACCGGTTGAACCATTTTTAAGGTGACTAGTTAAAATATTAGTTCGCTCCAATTAATGGACCTCGGGTGATCCGGTTTTATAAATTGAGTGACCTATATTTTGATTTAGGAACGTATTTTAGACTCGGCGACAAATTAAGGGACCTGAAGTGTACTTACCAAAAGTTATGACGTTACGTGAACAAAATGGGCTTAATATGGCTAGTATGAAAATGTGGGCCTTAACGGGCCTACTTGAAAACGCCAATCGGTCGTACAAGGGATGCATGTAGGACGAAAGGAGTAAGTTCACCGGAGGTTCCTCAACTTAACAACGAGATTATTTAAGATCCCTTAACCACAAAATCAGAAATGTTTACCCCTAAATTACTAAAACCGTTCACTCAAGGTCCTATAGCAGTATATATGAGTGGTTTCACTGACGTGACATCCTAGTTAGCAATTTTTTTTAAAAAAAGTATGTGGGGCCCACATGTCAGCCGCACATTTTTTTTTTCTTCTCTTCTCTTCTCTCTCTTCTTTCTTTCTCTTAGCGTGCGGATGTGGGTGGCGCAGCGTAGGGCGATCGCGGCAGCGGAGAGGCGGCGGGCGCGAGCGCGGCGGCAGGCAAAGAAGCGGAGGGTGAGCGCGGCGGCGGAGGGCGAGCATGGCACACGATTAACTGCATGATGCATGCACACTGTGTAGTATGAACATGACCGATTGATTTAATTTGGGTACCTTCTCCGGTACGTGCTGCTGCTATCGGTCAAGTAGACGTCGCCGGTCCTCTGGTCGACGTCGAAGCCGTTGAGGAAGAACAGAAAAGGTTCTTTTGTGTGGTGCCGCAAAGCCTGCGTGTGTTTGCTCTTGTTGTGTGCAATCGTGTAGTGCAAAATCTGTGTAAGAATAAGTGTGTGCGTCCACGATGTTAGAATAAATGGACTAGTAAATTAGCTAGTAAAATACTTTCCGGTTGAGGAAGTTGAACGGCACATCGATGGCCTCCGTCGTCACCACCTTGGCCAGCCCGCCGCGCGCCGGCACCCTCAGGAGGCCCAGATACGCGTCGGCCACGTACAGGTCGCCAGAGGCGTGGTGGAACTGCAGCCCCAACGGCCGCCCGCACACGCTCTCCGGCACCACCAGCTTCTTCTCCGGCGAGCAAACGCTGACGCTCCTGGTGGTGAACAAATCGTCAGTGCATGCTTACTTACGGGCGCCGGCAGCGTCATGGCGGCGGAGGGAAAGGCGGAGAGGAGGCAGCCGGCGACGGCGAGCTCGGCGGCGGCGAGCTCTCCTTCCGACACATCGCATACAGAGCGACGAGCGCCGAACTGGCCGAGGCGTAGAAGGCCAGCAGCGGCGCGGTCTTTATCCCGTAGGCGTGCGCAGCGCGAGCAGGGACTCGTCGCCACCATGGCCGACTACGGCGACTCGTCCCCGCACTCTGCCGCGGCCATCGACGGCGCACCACCATGGAGACGGTGAACCAGTTGGAGAGGAGGAAGACGGCGACTCCCAGGCTCCCACACCTCCTGAGCAAGCCGAACGACACGGCGTAGTTGTCCCTCTTGATGTCGCTGTTGCCGCAGAGCACGCAGAGGCCGAGCACGAGGATGGGAAGACGATGTAGTTGACGAGGAGAAAGAAGGGGCTCGCGAGCATGACGGGGAGGACGGAGTGGTAGTAGTCGGTGACGAACCCGAGCTCGTTGTCGATCACCTGGAACAGCGTCGCCGCCACCGTCGCCCTATCGGAGAGGGGGGCGCCGGCCGCCTTTGTCTCCACCTCCGCTGCTCCCGAGGGTGGGGGCGGCAGGATCCGCGAGCCGGCGGCGCCCACCCCCTCTCCCGCCGGCCTCAT
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| CDS seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVVRRRWPRQSAGTSRRSRPWWRRVPARAAHAYGIKTAPLLAFYASASSALVALSVSVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLAPPFIAKRRESRSTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY
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| Protein seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVVRRRWPRQSAGTSRRSRPWWRRVPARAAHAYGIKTAPLLAFYASASSALVALSVSVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLAPPFIAKRRESRSTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY |
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| Function | Protein STRICTOSIDINE SYNTHASE-LIKE 3 [UniProtKB/Swiss-Prot:Q8VWF6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsY58SG0409712200.01 | OsY58SG0409712200.01.T01 | Chr04 | 36659161 | 36667716 | - | IGDBv1 | ||
| CDS seq | ATGAGGCCGGCGGGAGAGGGGGTGGGCGCCGCCGGCTCGCGGATCCTGCCGCCCCCACCCTCGGGAGCAGCGGAGGTGGAGACAAAGGCGGCCGGCGCCCCCCTCTCCGATAGGGCGACGGTGGCGGCGACGCTGTTCCAGGTGATCGACAACGAGCTCGGGTTCGTCACCGACTACTACCACTCCGTCCTCCCCGTCATGCTCGCGAGCCCCTTCTTTCTCCTCGTCAACTACATCGTCTTCCCATCCTCCGACATCAAGAGGGACAACTACGCCGTGTCGTTCGGCTTGCTCAGGAGGTGTGGGAGCCTGGGAGTCGCCGTCTTCCTCCTCTCCAACTGGTTCACCGTCTCCATGGTGGTGCGCCGTCGATGGCCGCGGCAGAGTGCGGGGACGAGTCGCCGTAGTCGGCCATGGTGGCGACGAGTCCCTGCTCGCGCTGCGCACGCCTACGGGATAAAGACCGCGCCGCTGCTGGCCTTCTACGCCTCGGCCAGTTCGGCGCTCGTCGCTCTGAGCGTCAGCGTTTGCTCGCCGGAGAAGAAGCTGGTGGTGCCGGAGAGCGTGTGCGGGCGGCCGTTGGGGCTGCAGTTCCACCACGCCTCTGGCGACCTGTACGTGGCCGACGCGTATCTGGGCCTCCTGAGGGTGCCGGCGCGCGGCGGGCTGGCCAAGGTGGTGACGACGGAGGCCATCGATGTGCCGTTCAACTTCCTCAACCGGAAAATTTTGCACTACACGATTGCACACAACAAGAGCAAACACACGCAGGCTTTGCGGCACCACACAAAAGAACCTTTTCTGTTCTTCCTCAACGGCTTCGACGTCGACCAGAGGACCGGCGACGTCTACTTGACCGATAGCAGCAGCACGTACCGGAGAAGAGTATCGATCGTTTATGGGACTTTGAAGCGTTCAAACGCCAAGCACAAGCCGCGCAGCCGCTCGGCCCCGCAGCCAGCACGCGTGCCCGAGCCGCGCCACTCAATCCGCCGCGCCTCCCGTTGCATCCCGCGCGCGCGTGCCGTGGTGGCCGACCGCCTGGTCGCCGCCGCCGTCACCCTCTGCCGCGCCTGCTCGCACCTGTCGCCCGTGTCGCCGCTCCGCTCCAAACCGCCCCGCCTCAGTTTCCAAACCGACATTGCCGCCCTTAAAGCCCCGGGCGCCCTCCCTCTCTTCTCCTCTCGTTGTCCCATCGCCTCCACTCCATTGTTGCCGCCGCCTTCCGAGCTCAATCTTGCCCCGCCGTTCATCGCCAAGCGCCGGGAGAGCCGTAGCACGAGTAGCCTCCCCGTAGCTAGCCGGCGCCGCCCCGACCGTTGCCGCCGCTCGCCGCCGTCGCCGCCCGTGCACCGTAGCACCCGCTCGTCGCCGGCCTCGCTCGGCATAGCTCCGCTCAATCCGACGCTAGCAACGGATTCCCGAAGCCGCGTAGATGCTCTCACCGCCGGGAATTGGCCCCTCGTGACCTCGTCGCCGTTTCCCCCTTTTCTCTCCGCCGGTTGCCGCAGCCACAATCCGTCGCTGACGGACTCCCTCCGGCGAATCCAAGCCGTTGGCTCGCTCCCTCTCATTCTCCCTCGTCATCCCGGTGTACGCCCCGTCGCCCCTCATCGTCGCAAGGCGTCCCGGAGAAACCGCCGCCGCCTGCCGTCCATTCGCGGCCGGCGCCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTCGGCGCCATGTCGGCGCCAGCTCGGCCGAGATCGGGTCGGGCCGACCCCGGTCAGCCCCTCCCTTGCGCCTCGGAAATCGTGCACTCTGCACGAGTATCGACGGCCGCCTTCAAACTTAAAATCGTAAAAACATCTTGGGTAAAACTTGGGTTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAATTTTCCAAAACCGCGGACCGGGGAACGTACCGGGTGTACGGTTTCCCGCTCTTGCACTTAAGGACCGTTTCCTTGGAATTTCATCCGAACATAAGACAATACACGTACGACAAGATGCATGAAGAGTTGTTGGCGACGATCGACGAGATGCACGTTGAGGTTCAGGGAACGATGGTGTATCAATTAAAGTTGGCGACTGATCGACCGGACGAAGCGGCCAACAAGTATCATGTGGGGGTTCATCGCATGCCGCATGATCGACACATGCATGCATGCATGCACCACGTGATATATTGTACATCGATCGGTGTCATCATGAATCTCGATGTGGTACACGCACGCACCAGTCCAAATAAGTACTCCTATCTAAAGTACTAG
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| Protein seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVVRRRWPRQSAGTSRRSRPWWRRVPARAAHAYGIKTAPLLAFYASASSALVALSVSVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLAPPFIAKRRESRSTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g59300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0031920 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0032690 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0032260 | RBH | 0.0 | 1.768901 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0032120 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0032390 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0556800 | SBH | 0.0088645 | 0.9976015 | 0.0922595 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0031000 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0562800 | RBH | 0.048037 | 6.627797 | 0.0361925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0031470 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0031290 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0031400 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0031990 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0031950 | RBH | 0.0 | 3.728535 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G031460 | RBH | 0.0 | 0.713568 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0031200 | RBH | 0.0 | 0.000000 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C04g18078 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: J4155S | J4155S | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_04g0317800 | SBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_04g0384900 | SBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0407876200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0417400400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_017885 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0414882400.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0416709800.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0408744200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0409970200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0412484600.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0408722800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0408683600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0407784000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0409395800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0416489800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0410191600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0410080800.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0407871800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0407868600.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0409958200.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0409533000.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0421315200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0412525800.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0407777400.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0407805800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0409536200.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0401244400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0413163000.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0406027900.01 | RBH | None | None | None |
