Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsJ4155G0410191600.01 | OGI:04103170 | 44/50 | Os XI-1B: J4155 | J4155 | SICAU | Chr04:34828940-34841349 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | 125827_J4155_TRA0447940,125827_J4155_DEL0452710,125827_J4155_INS0456860,ZH11_J4155_INS0401100,ZH11_J4155_INS0421600,ZH11_J4155_TRA0424790,FS32_J4155_DEL0444860,MH63RS3_J4155_DEL0444820,132278_J4155_INS0410470,132278_J4155_INS0427120,127652_J4155_INS0470630,127652_J4155_INS0448250,127652_J4155_INS0450100,128077_J4155_TRA0407280,128077_J4155_INS0430570,128077_J4155_INS0436290,127564_J4155_DEL0450800,127564_J4155_DEL0455230,G630_J4155_DEL0400990,G630_J4155_DEL0447420,127518_J4155_DEL0447880,XL628S_J4155_DEL0442070,FH838_J4155_DEL0446210,ZS97RS3_J4155_DEL0447670,Tumba_J4155_DEL0449970,02428_J4155_INS0411170,02428_J4155_INS0430720,KY131_J4155_INS0425390,KY131_J4155_TRA0428590,Y3551_J4155_DEL0441880,IR64_J4155_DEL0442680,NamRoo_J4155_TRA0400930,NamRoo_J4155_INS0425120,NamRoo_J4155_INS0431110,TM_J4155_DEL0442940,R9311_J4155_DEL0446450,Nipponbare_J4155_TRA0401210,Nipponbare_J4155_INS0413130,Nipponbare_J4155_INS0418390,Kosh_J4155_INS0423210,Kosh_J4155_DEL0426410,DHX2_J4155_INS0416060,DHX2_J4155_INS0421680,DHX2_J4155_INS0422000,G46_J4155_DEL0441050,LJ_J4155_INS0422740,LJ_J4155_INS0429430,LJ_J4155_INS0429790,Basmati1_J4155_DEL0431240,Basmati1_J4155_INS0439180,LK638S_J4155_DEL0440200,117425_J4155_INS0436100,117425_J4155_INS0439100,132424_J4155_DEL0455330,OglaRS2_J4155_INS0437690,OglaRS2_J4155_INS0450160_1,OglaRS2_J4155_INS0458660_1,117534_J4155_DEL0401630,117534_J4155_INS0446910,117534_J4155_DEL0452490,CN1_J4155_DEL0400830,CN1_J4155_DEL0441070,DG_J4155_DEL0444050,Azucena_J4155_INS0408540,Azucena_J4155_INS0427440,Azucena_J4155_INS0437480,D62_J4155_DEL0440350,Lemont_J4155_INS0421510,Lemont_J4155_INS0426800,Lemont_J4155_INS0427090,II32_J4155_DEL0445690,
More
|
||||||||||
| DNA seq | CTCGGATAAAACGTCCGATCGATCTCTAGTCGCGTACTCGTACGTACTAACAATCTTTAACAAGGTGGGATGTAAGAGAATACGAGGTTGAAATGACGAGGGATCGCTACTCGCTAGCTAGGAAAGAAAAACAGTCTTACTAGTTATTATTGCACGGACATAACGAAAGCATATGCGTACAAAAGCCAAGGCCTGAAGACTAAAGAGACTAGGATCAGCTAGCGACGTCAAGCACCTAGCTCCCTAATTAACGAGCAACGACAGACAGCTGAATGATCAAGCAGAAGCAGCGAAGCCCTCCTCATCGCTGGTGGCGAAGTCGACGAGGCTCTGGCTGTTGGTCCTGAAGCAGCTGCGGCGGATCTCGCCGACGTTCCTGTCAGTCCTCGGCACATTGCTTAGTTTGACCATGGACTTGGCGAACTGCGTGAAGAAGGCGGCCTTGTCCGTGGCGAACTGCCTGACGATGGGCGCCGTGATCCGGTCCTTGATGAGCGCCATGTCGGAGGTGAAGACGCCCTGGTTGTGGGTGAGCGCGATGTAGTAGGCGTTGTCGAAGGCGTCGGGGGTGATCACGTCCAGGTTCTGCAGCCGGTTGGGGTCCTTGGTGCAGTTCAACGCCAGCTTCTTGGAGAAGGTGTCGTCCTGGCGGCGGGCGCGGTCATCGAAGAAGGCGCAGCGTGTCCTCCCGACGGTGTGCCCGCCGGAGAGCGCCACCAGGTCGGCGGCGTCCCGCAGTCCCCTGCTTGCAAAAAGGTCGATGAGATCCTGGACTCTGGAGGTGCCCGGGCCCGGGAGATCTCCGACGAGGTCCAACGATGCCGGAGCGAGGCTGTCTTTTTGGCCGAGTGGCACGGCGTAAGAGGGGCCGCCGGAGACGACGACAGCGTCGCGGGTGGCGAGGGCGGAGATGTCGGCGCAGGAGACGGTGGGGCCGCAGGCGGCGTGCACCTTGGCGCGGATGTCCTCCACCAGCTGCAGCGCCCGCGGCTGCAGCGTGAGGTTTGGGCCCATGCCCTGCTCCGAGTTGCTGCCTCCTCTCAGATACACCGACGCATCGCACCCCTGCATATATATATGTATGTTCAGTTCAGTACAGCATTGTTCGTCGGTACGTGCAAATGTTCTTGCGTGCGTGCCTGCGGGAAGCAGTCGTGGAAGAAGATGCGGAGGAGGCCGGCGGCGAGGGCGATCTCCTGCTGGAGAGCGGCTTGCACGGAGGAGCGCACGATGGACTCCAGCTGCGGGCACGACGCCGCGTGGAAGTCCACGGACAACTCTGCTGCTGCTGCTGGTGAGGAGATGAGGAGGACGGCGACGATGGAGACGAGCTCCAGGACGGCCAGTCTCCTGCTCGCTGCACCCATCTCAATTTGGCTCTCCGCACTCACTCTCTTACCGGCTGTGCTGTGCTAGCTTGTGGCTTCCTCACGTCCAATACTGTATGGCTAGCTGTTATTTATAAGCCAGCAACCATCAATCTATGTACCCCACATGACAGACACTACGCCACGGACAGACACACATGCACAGTACTCATAACACAAGCAAATCGCTAGCTTCATTCCATGAGCCTATAGATAAACAAAACAACAAATTACAGTCGAGTGGTCCAACGAGTTTATCACGTGGTTGGTGAAAAGTACTCATTCCCTCCGTCTCAGAATATAGCAACCTAGAATCGGATTGGACATATTCTAAGATATGTCCAGCTTTATAGTACTAGGATATATCCAATCTAATTCTAGGTTGTTATATTCTATGACAGAGGGAGCATATGTTATCTTATGGATAATGGGTACATGTGTGCGCCTTTTTTTACGGTTCATGGATACCTTTTGTTCCCTATCTTTTTTTTTCCCGCACGCACCTAGAGCTAACAGTAAGCAAGTGGTTTGTACATTACAATATGGTGGGGCATTATCTCATACTCGCTCCATCTGTGCATCTCTATTACTCTAATTTTATCCTAAAATGCATTATTAAGCACTACATGTTTGTGTCAATAATTTCTTATTTAAGTTTATCTCCATCTTATATTACACCGGCCCCTACCCCCCGGAGGAAAAAAAACAACAATCCTAGTGCATTATTAGGGGTATGTATGTCATTTATCTTTCCTACTAATTTGTGCTTCATGTGCTAAAAATATACTTATTTAAGGACGATGGTAATACTAGTATGTATTACTAGTATGTATAGTAGTACTACCTCGTTTGGGTACCGGTTTACCGTTTTTCTAAGCTATCGGCTTGTCGTGGTTCCTTTTCCCTTTTCTTTGTTATCAGAAAAAAAATGTTTTCCTAATACTTTTGTCACTTTCAATGATGCGACGTGACAGGTCAGGATACAAGCATGGACTAGTGAATGAAATGTATATTTTGCAAATACCCCCACCTCTTCATTTATCTCTTCTCTCTTGTCTCCGGTCCTCATCCAGTGTTGCCCTATTTGAGATCTTGACCAGTAGAGACGATAACTTAGCTTGAGGGAATTAACAGAAGTGCCTCCGCTATCTCATCTGGCTGGACACACACGCGGGCGACGCGATGCGCTGGTCAATCACCCCCTCCACCCACGTGGCCCTCTACAATCACCACACTCACTTTATTGCTCCATGCGCTGGCCTCAGCCTCCGCCTCCGCCTCTGCTCCACACTAGCATCCTGTGTTACCTGATACGGCACAAATGTCACGTATCCGTATCGGATACTCGCACGGACACGGATACGTTTCGGATACGCTCTGATACGTATCCCGTACGTATCCCAGATTTTCGTAATTTTCAATTAAATGGAAAAACACGGATACTTCACCGATACGTCCCGAACATTCCTAATATGGTTCCATCTGCTATTCCTCCGGATGCTCCTCATGCTCGTGGCCTTACGTCCCGGTGCCGTCGTCATCGCCACACGCGGAAGCAACAGCATCGCAGCTAGGCGCAGCGGAAGATTGCCCGCGCCAACGCCAGGCGGAGGCCGTTTGGCCGCTGCCGCCGCCGTCGCCGCCGCCTCCGCCGCTGCCGCTACAACCGCCGGCGGCACCGTGGAAGCACGAGTATACTTCTCTTCGTTCCCCTGTGAGCCAAATCTCCTCTTCTGGCTTGGCTTTCCAAGTTCCCATGCTTGATCTGTATTTTTTTTTCTTATTTTCTTGCTACAAGTAGTTAAGCATTATCATGGATTTTGGATTTGGAAGCTCAGGCTAGTGCATGTGCATCTAGCAATCCTAGTGCTAGCGCGGCTGCTCATGCAGCTGCTAATTTATCAAGAGAAAGCAAGGGCAAGTAACATCTTGATATTGGTGGTGGTCGATCGGTAGGTGTTGGGTCCTCCTACTTGCCTAGTCGGCGCTTCACTTGATGTTGTAAGCACGATGCATCAATTTACATGTGTTGATTTTTGTCTGAATTCGCCAACTTGAATTATCTAGAAAAGATAATTTGGAGAAGATTGATACGGAATTGGCTGAACACTCCTATTTTATTGCTATTTCCTTAATATATATAAATATGTACACGTATCCCCGTATCTTAATATTTTAAAAAATGACGTATCCCCGTATCACCGTATCGCGTATTCGTATCCCCGTATCAAGTAACATAGCCAGCATCATGATCAGTAGTCTCTATCTTCTATACCCACTTGTCACCACGAATATTCTTGCTCTTCCTAGCTCTCGTCTCTGCTAAGCCCACGCCGACCCTGAGCTCACCAACACCATCGTCATCGAGTGTGTGGCCAGGTCATTGTGGAAGGGCATCAAATGGCAGTTGTGGCCAATGGCCATGTACACATCAAATTCTACGGTGGCGGGTTGCCGAGCATCACTAGTTCATTGAGCCCGAGCAACCCCCAGCACCGCCTTGTCGAGCCCAAACAATGCTTAATAGAGGATATAAAGAGCGAATAGAGAAAGATGAAGTGGAAGGAGGGTTAGAAGGAATCGCTCGTCCATGCTGGTAGCTCAACTCTTCACACCACGTGTGTGAAAAATGAAAGAAAAATATAGCTGAAAGGGTGACCATTTCTAAAAGTGGTAAATAATTTAATATCCTCGTAAGTTTTAAACCACATGTGCTTCGAAGGCCACCCATTTTTAAATGTGTCTGCTCCCAACGGATAGACAACCTATTTATGGATATGTGCTATCCGAATTAACAAGAACCCCAAAACATCTCCCAAAAGATCCCATGCATCCTACCTCCTCTTGTCTATTTTTAACAACAACCCTCCCCCCCTCCCCCTCCTCCAAACTGTCATGCGGTTCCTCTAACTATGGATGGAAGTTGTTTTTTTGGTATTCAAGTAGTTTTCTTGTTTTTAATTAAGTTGTTATTTTATAAGCCGCAATGCTCGATCTAACTGTAGTTTTTTAAAGCAAATGCCCGGAATGAATTCTACTATTAAGAACCCATTAAGAAAATAATATACTTGCTGCTTTTAAGTTCTTTATGTACGTGCTACTTTAGATAATTGTAGTACTACTAGTACTTTAGATAGGAGTACTTATTTGGACTGGTGCGTGCGTGTACCACATCGAGATTCATGATGACACCGATCGATGTACAATATATCACGTGGTGCATGCATGCATGCATGTGTCGATCATGCGGCATGCGATGAACCCCCACATGATACTTGTTGGCCGCTTCGTCCGGTCGATCAGTCGCCAACTTTAATTGATACACCATCGTTCCCTGAACCTCAACGTGCATCTCGTCGATCGTCGCCAACAACTCTTCATGCATCTTGTCGTACGTGTACTGTGCGCGCGTGAGTCGACCTTATCGAGGGCTGATGAATTACAGGTACGGTGGTGGATCCATCAGGAAAAAGATCTTGTTTTCTTTAACCCTTGTGAGGCAGACGCATATGTTGGTACTAGGTGTGGACAATTACATAGCTTATACTTCCTCCGTCCTGAATATTTAAAGGCATTGACTTTTTTAAATATATTTAACCATTCATTTTATTTAAATAATTATTTATTCTTTTCTTATCATTTGATTCATTGTTAAATATTTGAATAAGACGAACGGTCAAACATGCTTAAAAAAGTCAATGGCGTCAAATATTTAGGGATGGAGAGAGTATAAGATTACTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCACATTCATATTGATGTTAATGAATCTAGATATTTCACAATATAAGTCATTCTAGCATTTCTCATATTTATATTGATGTTACATATCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTATTGTCACGCCCCGAACTAGTACCGATCGGAACTAGCCCGTGACGCTCCAAATTAACCTGTTAATCGATACTAGTCCCAGGAAACAGTGCTGGTATCACAGGAAGACAGGATATCACAGCAATAGAGGTCTCTTTATTATAGAGTAGGAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGGAAGCGGAAGCCAAGACTTGGGCCAGACAACACAGGCGCGACTTGGGAACTAGGCCGAAACCCTAAAACTCATCGTAGCCGGCTTGCTCCTGGAAGAACTCCTTGTCAGCGGGATCCGCTTCATCTTCTTCAGCAACTGGGGGGGTTATTTATATAGAGCAAAGGTGAGTACAGGAGTACTCAGCAAGCCATGGGAAATAAGTGTTTAATGAAGGCTTCAAGGAAAGGCTGTTGTTTTTGGAATTGATTTTATTTGAACTCTCTTATCTAAAAACAACTAAGTGAGTGCTTCTCAAACGACACGGATAAGACAGTGCGTCTCGTCCGGTCGGAGTATGTGCAAAGGTATCAGTCTTTAGAATTGAAATAAGGTTGGCACCCGGCCAATAGCTTTTCAAACGGCCACCCGGGCCAACAACTTTCAAACGGCCACCCGGGCCTAGCTGATCCCATCAGCTGCAGATTTTCCAAACATCGATCCCCTTTCCACAACAGCAATTTCACAAGCAGTAGTCAAACAAAACTACGCTAGGAATCACCTCACATCCGCCCATGACCGTGGGCACGGCTGTTCGAACAGTTTAATAACCTCTGCAGAGGGGGGTACACTTTACCCACACGACACTACTAACCCAGATCACCCAGCCCGTGGGGATCAGCCACGTCGGGAGACCTCCAAGCTTTCATGACAAGGCATTTCGAAAGCCGACAAAGGTTTACCATATGCCGACGAGAGGGGTCCCAGGCCAACAACAGGTTAGGTCCCAGACCGTACTGTGCCAGAAAGCCCAGGGGTCCTCCCCGACACCACCCCGGCGAATCCACATGTCTCTCGGCATCAAGGCTCCCCTGATAAGCTAGTTACTCAGCCAGGGGTGTCCTATTCCACCCATGTGGTCGTACTTGTCTTATGTTCGGATGAAATTCCAAGGAAACGGTCCTTAAGTGCAAGAGCGGGAAACCGTACACCCGGTACGTTCCCCGGTCCGCGGTTTTGGAAAATTCATTTAGTTCGCAAGCACCGACCCAGGTGTCGGGTTTTCCAAGTCTTTTGTAAAACCCAAGTTTTACCCAAGATGTTTTTACGATTTTAAGTTTGAAGGCGGCCGTCGATACTCGTGCAGAGTGCACGATTTCCGAGGCGCAACTGGGTGGGTACAAGGGAACATGGTATAACAATTAACAAAGGAAGGTTAATATGCAACAAACTAGGTAGGTCTGCCAATCTGCCTTGCAGACGGGACAACAGATTAAGTGCGATCCTATCAATGCATAATATTTTTCAAGCAACATAATTAAATTTCAAATATAGGTTCAAGATGTTCAAAGGTGGCTTGCCTTGCTCGAGATCTGGAGCTTGATCCTCGAAATCCCCGCACTGCGGGTCTTCAGGCTCCGAAACTACACGCGAAACGGGACAGCTCAACAAACGGCGAAAAAAAAATAAAGCCCTATTAATGACCCCTAAGCATGCCATTAGATAGATCTCGAGATTTGAGGAATTTTGGAAGTTGAACGGAGTCAAACGGATTTACGGTTGGGAAGATATTGAATTTCTAAGATTATTGGATTTTTGGTCTAAAGGAGAAAGAATTTAATTAAATCCTTTTTGAAAAAGAAAAGAAAAGAAAAGAAAAGAGGGAGGGAATATAGACTTTTCTCGGGCGGCTAGGGCGCGGCCCAAGAGAAATGGAGCGGTCCGGCCGAGCTAAATGGGCCGGCCGGCCCAAGGCGGCCCAAGACGCGCGCGCGCGGGAGGGGAGGAGAGAGAGAGCCGGTGGACCGGGCTCACCACGCGCGGTCCCGGGTGGGACCCGCTTGTCGGTGACACGGTTCACCGTGCGGAGCGAGCACGCGGCGCACGCGCGCGGGCGGGGGAGGGATGCGGTGCACGCGCGTGGTTCGCGGAGGAACGGATGCGGCGGGCCCAGGCGCAGCCTCACGGCTCGCGGTGGAACGCGCGCACGGGAGGGGCTGACCGGGGTCGGCCCGACCCGATCTCGGCCGAGCTGGCGCCGACATGGCGCCGACGTGGCTGCCACGCGGGCTGGCGGGAGGAAGACGAAGGCGCCGGCCGCGAATGGACGGCAGGCGGCGGCGGTTTCTCCGGGACGCCTTGCGACGATGAGGGGCGACGGGGCGTACACCGGGATGACGAGGGAGAATGAGAGGGAGCGAGCCAACGGCTTGGATTCGCCGGAGGGAGTCCGTCAGCGACGGATTGTGGCTGCGGCAACCGGCGGAGAGAAAAGGGGGAAACGGCGACGAGGTCACGAGGGGCCAATTCCCGGCGGTGAGAGCATCTACGCGGCTTCGGGAATCCGTTGCTAGCGTCGGATTGAGCGGAGCTATGCCGAGCGAGGCCGGCGACGAGCGGGTGCTACGGTGCACGGGCGGCGACGGCGGCGAGCGGCGGCAACGGTCGGGGCGGCGCCGGCTAGCTACGGGGAGGCTACTCGTGCTACTACCGAAAACTAAGGGGAGAGATCGAGCGGGGAGGAAGAACGGAGGGAGGCACTACCGAGATGAGGAGGGGCGCTGTGACGAGAGGCCGACGGCGCGGGAGTGATCTCTCCGGCCTCGGGCCGGGGAAGAGGAAGGAGAGGGCGCGCCCGGAGTACCCTTCCGCGTCCACGAACGCACCGGCTCTCCCGGCGCTTGGCGATGAACGGCGGAGGCAAGATTGAGCTCGGAAGGCGGCGGCAACAATGGAGTGGAGGCGATGGGACAACGAGAGGAGAAGAGAGGGAGGGCGCCCGGGGCTTTAAGGGCGGCAATGTCGGTTTGGAAACTGACTTTGGGCGGTCAAGGCGCGAGCTGGCGCTTGGCGCTCGCGGCCAAATCGGCGACAGGGCGGAGGGAGGATGACGCCGGCGGGAGGAAAAGGGGAAAAGGAGGGAGAGAAAGGGGGCTCGCCCCTTTCTTCTTTGGGAAAAGGAGGAGGGGAGCGGGGGCGTCGCGGCAGAGGGAGGAGGGGCTCTGCCTCCGTCCCTTGGCGGCTTGCGCGCGGAGTGGCGGGGCCGAGGCGATGACGACGGCAATGACGGCGGGGCGGTTTGGAGCGGAGCGGCGACACGGGCGACAGGTGCGAGCAGGCGCGGCAGAGGGTGACGGCGGCGGCGACCAGGCGGTCGGCCACCACGGCACGCGCGCGCGGGATGCAACGGGAGGCGCGGCGGATTGAGTGGCGCGGCTCGGGCACGCGTGCTGGCTGCGGGGCCGAGCGGCTGCGCGGCTGCAGGCGGCAGGGCAGCGGGAACGGGTGACGCGGACGGCGCAGACGGCGCGGCACGGGCGGCAACCCCGCGGGCGCGCGCGCGAACAACGGCGCGCGGTGGTCGGCTTCGCGGGCGAGGAGCTCGCCAGGGATGGGGAGAAGGAGAGCGAGGGGAAGGGGGCGCTCGGCGCGGCGCTCGCGCACACGCGCGCGGCGCGCGGGCGGAGCGGAGGGGGAGGGAGAGAGGGAGAGAGAGAGAGAGGGAAAGAGAGAGAGAGAGAGCGCCGGGAGGGAGGGGAGATGGGCCGAGAGAGATTCGGCCCATCGACCCTGGGGGAGGCAAAATAGACTTTTGCGGAGGGATTTGATTTGGAAGGATTTGGATTCGGAATTGAACTCGACGATAGATCGGGGATTTGAGATCTTGAGAAGGCACGGACACTAGACAACAAGCAAAAAAACAAATTTCGCAATTAGGGTTTTTAAGAGATAATTTTCCCGCTAGGCGCCACGACGGAACGGGCGCTACACTTATATTGTGAAATGGGGGAAGTAGAAATTATTACAGACGTTGTGGGTCAAAAATTACAACTTATAAAATAACAGCTTAATTAAAAACAGAAAACTTCTCAAACAACTACTCCGTAGTTAAAAGTTAAAATGGCTTGCAATATTTATTATAAAACGGCCGGGGAGAGTAGTTTTCTAACGCCACGCACGCGATGCATAAGATTGTATATATGTACTACCGGGGTGTTGTAACATCCCGGCCTAGGGCTTAATAGGATTAATAGAATACTCATATCAACAAGTTGCAACTTCTTTTCCGGAATCCAATCTCCAAAGAACTCCAGGGCTAAGTGTGCTTGGCCTGGAGCAATTTGGGATGGGTGACCGACCGGGAAATTCTTCCCGGGTGCACACGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGAGGGCAGTCTATGACCTATGAGAGTGAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGTGGGCAGTCTATGACCTATGAAAGCTATCAGATGTAAGCGGGTCCGGCCTGGGGAAAGCTATCAGATATAAGCGGGTCCGGCCTGGGGGAAGGCGGGATGTTACAGGTGTTTGGTTGCCAATCATACTTTGTCGTAATTTACTTCGCTTAGGCAGGTTTGATCACATTGATGGCTGTTTGGTTGTAGCCACTATTGTGGCAAGATTTTCTTCCTATAAATTAGGTCCATATGTTATTAACTTGAAAAAGTGTGGTATGATTTTCTTAGGCTTATTAAATTGTGGCTAAGAATTTGATCACCTCAAATTAGATAAGTGTAACAATATTTATTGATAAAGTATGACTAGTAACCAAACGTGCATGCATACCCTAACATCCACTTGTTGTTGTTATATGATAGGTAGCGCGTGCGCCGAGACCTTGTGCTTGGCGTTTGAACGCTTCAAAGTCCCATAAACGATCGATACTCTATTAGTCAAGTGGATGCATCGAGCTAGGCTATAGTTTCAATTTAATCACTGTTTTCCCACTTCCCAGCTAGTACCGCTATATTATATTACATGTGGCTGAATTTATAAAGTGAGTGGCCATGTTGTCCTCGTGCAGCTGCAGCGTTAGGAAGACTATATGATTATTGGACTCGCACACTTTGGAGTTGGTAGAATGCAATCCTTCTTTTTTATTTCAAAAAAAGTTCAGTGGATGTGTTTATCTGACAGGCTAACAGCTATATTTGGAAACTCAAAATCCCCTTAAAGATATATATCTTTTCTGAAATGGTTAATTTAGTGGCACATAAAGAAAACGGTAAACTTTTCTTGGCATATAAGAAACCGGTTGAACCATTTTTAAGGTGACTAGTTAAAATATTAGTTCGCTCCAATTAATGGACCTCGGGTGATCCGGTTTTATAAATTGAGTGACCTATATTTTGATTTAGGAACGTATTTTAGACTCGGCGACAAATTAAGGGACCTGAAGTGTACTTACCAAAAGTTATGACGTTACGTGAACAAAATGGGCTTAATATGGCTAGTATGAAAATGTGGGCCTTAACGGGCCTACTTGAAAACGCCAATCGGTCGTACAAGGGATGCATGTAGGACGAAAGGAGTAAGTTCACCGGAGGTTCCTCAACTTAACAACGAGATTATTTAAGATCCCTTAACCACAAAATCAGAAATGTTTACCCCTAAATTACTAAAACCGTTCACTCAAGGTCCTATAGCAGTATATATGAGTGGTTTCACTGACGTGACATCCTAGTTAGCAATTTTTTTTAAAAAAAGTATGTGGGGCCCACATGTCAGCCGCACATTTTTTTTTTCTTCTCTTCTCTTCTCTCTCTTCTTTCTTTCTCTTAGCGTGCGGATGTGGGTGGCGCAGCGTAGGGCGATCGCGGCAGCGGAGAGGCGGCGGGCGCGAGCGCGGCGGCAGGCAAAGAAGCGGAGGGTGAGCGCGGCGGCGGAGGGCGAGCATGGCACACGATTAACTGCATGATGCATGCACACTGTGTAGTATGAACATGACCGATTGATTTAATTTGGGTACCTTCTCCGGTACGTGCTGCTGCTATCGGTCAAGTAGACGTCGCCGGTCCTCTGGTCGACGTCGAAGCCGTTGAGGAAGAACAGAAAAGGTTCTTTTGTGTGGTGCCGCAAAGCCTGCGTGTGTTTGCTCTTGTTGTGTGCAATCGTGTAGTGCAAAATCTGTGTAAGAATAAGTGTGTGCGTCCACGATGTTAGAATAAATGGACTAGTAAATTAGCTAGTAAAATACTTTCCGGTTGAGGAAGTTGAACGGCACATCGATGGCCTCCGTCGTCACCACCTTGGCCAGCCCGCCGCGCGCCGGCACCCTCAGGAGGCCCAGATACGCGTCGGCCACGTACAGGTCGCCAGAGGCGTGGTGGAACTGCAGCCCCAACGGCCGCCCGCACACGCTCTCCGGCACCACCAGCTTCTTCTCCGGCGAGCAAACGCTGACGCTCCTGGTGGTGAACAAATCGTCAGTGCATGCTTACTTACGGGCGCCGGCAGCGTCATGGCGGCGGAGGGAAAGGCGGAGAGGAGGCAGCCGGCGACGGCGAGCTCGGCGGCGGCGAGCTCTCCTTCCGACACATCGCATACAGAGCGACGAGCGCCGAACTGGCCGAGGCGTAGAAGGCCAGCAGCGGCGCGGTCTTTATCCCGTAGGCGTGCGCAGCGCGAGCAGGGACTCGTCGCCACCATGGCCGACTACGGCGACTCGTCCCCGCACTCTGCCGCGGCCATCGACGGCGCACCACCATGGAGACGGTGAACCAGTTGGAGAGGAGGAAGACGGCGACTCCCAGGCTCCCACACCTCCTGAGCAAGCCGAACGACACGGCGTAGTTGTCCCTCTTGATGTCGCTGTTGCCGCAGAGCACGCAGAGGCCGAGCACGAGGATGGGAAGACGATGTAGTTGACGAGGAGAAAGAAGGGGCTCGCGAGCATGACGGGGAGGACGGAGTGGTAGTAGTCGGTGACGAACCCGAGCTCGTTGTCGATCACCTGGAACAGCGTCGCCGCCACCGTCGCCCTATCGGAGAGGGGGGCGCCGGCCGCCTTTGTCTCCACCTCCGCTGCTCCCGAGGGTGGGGGCGGCAGGATCCGCGAGCCGGCGGCGCCCACCCCCTCTCCCGCCGGCCTCAT
More
|
||||||||||
| CDS seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVVRRRWPRQSAGTSRRSRPWWRRVPARAAHAYGIKTAPLLAFYASASSALVALSVSVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLAPPFIAKRRESRSTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY
More
|
||||||||||
| Protein seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVVRRRWPRQSAGTSRRSRPWWRRVPARAAHAYGIKTAPLLAFYASASSALVALSVSVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLAPPFIAKRRESRSTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY |
||||||||||
| Function | Protein STRICTOSIDINE SYNTHASE-LIKE 3 [UniProtKB/Swiss-Prot:Q8VWF6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsJ4155G0410191600.01 | OsJ4155G0410191600.01.T03 | Chr04 | 34829219 | 34841349 | - | IGDBv1 | ||
| CDS seq | ATGAGGCCGGCGGGAGAGGGGGTGGGCGCCGCCGGCTCGCGGATCCTGCCGCCCCCACCCTCGGGAGCAGCGGAGGTGGAGACAAAGGCGGCCGGCGCCCCCCTCTCCGATAGGGCGACGGTGGCGGCGACGCTGTTCCAGGTGATCGACAACGAGCTCGGGTTCGTCACCGACTACTACCACTCCGTCCTCCCCGTCATGCTCGCGAGCCCCTTCTTTCTCCTCGTCAACTACATCGTCTTCCCATCCTCCGACATCAAGAGGGACAACTACGCCGTGTCGTTCGGCTTGCTCAGGAGGTGTGGGAGCCTGGGAGTCGCCGTCTTCCTCCTCTCCAACTGGTTCACCGTCTCCATGGTGGTGCGCCGTCGATGGCCGCGGCAGAGTGCGGGGACGAGTCGCCGTAGTCGGCCATGGTGGCGACGAGTCCCTGCTCGCGCTGCGCACGCCTACGGGATAAAGACCGCGCCGCTGCTGGCCTTCTACGCCTCGGCCAGTTCGGCGCTCGTCGCTCTGAGCGTCAGCGTTTGCTCGCCGGAGAAGAAGCTGGTGGTGCCGGAGAGCGTGTGCGGGCGGCCGTTGGGGCTGCAGTTCCACCACGCCTCTGGCGACCTGTACGTGGCCGACGCGTATCTGGGCCTCCTGAGGGTGCCGGCGCGCGGCGGGCTGGCCAAGGTGGTGACGACGGAGGCCATCGATGTGCCGTTCAACTTCCTCAACCGGAAAATTTTGCACTACACGATTGCACACAACAAGAGCAAACACACGCAGGCTTTGCGGCACCACACAAAAGAACCTTTTCTGTTCTTCCTCAACGGCTTCGACGTCGACCAGAGGACCGGCGACGTCTACTTGACCGATAGCAGCAGCACGTACCGGAGAAGAGTATCGATCGTTTATGGGACTTTGAAGCGTTCAAACGCCAAGCACAAGCCGCGCAGCCGCTCGGCCCCGCAGCCAGCACGCGTGCCCGAGCCGCGCCACTCAATCCGCCGCGCCTCCCGTTGCATCCCGCGCGCGCGTGCCGTGGTGGCCGACCGCCTGGTCGCCGCCGCCGTCACCCTCTGCCGCGCCTGCTCGCACCTGTCGCCCGTGTCGCCGCTCCGCTCCAAACCGCCCCGCCTCAGTTTCCAAACCGACATTGCCGCCCTTAAAGCCCCGGGCGCCCTCCCTCTCTTCTCCTCTCGTTGTCCCATCGCCTCCACTCCATTGTTGCCGCCGCCTTCCGAGCTCAATCTTGCCCCGCCGTTCATCGCCAAGCGCCGGGAGAGCCGTAGCACGAGTAGCCTCCCCGTAGCTAGCCGGCGCCGCCCCGACCGTTGCCGCCGCTCGCCGCCGTCGCCGCCCGTGCACCGTAGCACCCGCTCGTCGCCGGCCTCGCTCGGCATAGCTCCGCTCAATCCGACGCTAGCAACGGATTCCCGAAGCCGCGTAGATGCTCTCACCGCCGGGAATTGGCCCCTCGTGACCTCGTCGCCGTTTCCCCCTTTTCTCTCCGCCGGTTGCCGCAGCCACAATCCGTCGCTGACGGACTCCCTCCGGCGAATCCAAGCCGTTGGCTCGCTCCCTCTCATTCTCCCTCGTCATCCCGGTGTACGCCCCGTCGCCCCTCATCGTCGCAAGGCGTCCCGGAGAAACCGCCGCCGCCTGCCGTCCATTCGCGGCCGGCGCCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTCGGCGCCATGTCGGCGCCAGCTCGGCCGAGATCGGGTCGGGCCGACCCCGGTCAGCCCCTCCCTTGCGCCTCGGAAATCGTGCACTCTGCACGAGTATCGACGGCCGCCTTCAAACTTAAAATCGTAAAAACATCTTGGGTAAAACTTGGGTTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAATTTTCCAAAACCGCGGACCGGGGAACGTACCGGGTGTACGGTTTCCCGCTCTTGCACTTAAGGACCGTTTCCTTGGAATTTCATCCGAACATAAGACAATACACGTACGACAAGATGCATGAAGAGTTGTTGGCGACGATCGACGAGATGCACGTTGAGGTTCAGGGAACGATGGTGTATCAATTAAAGTTGGCGACTGATCGACCGGACGAAGCGGCCAACAAGTATCATGTGGGGGTTCATCGCATGCCGCATGATCGACACATGCATGCATGCATGCACCACGTGATATATTGTACATCGATCGGTGTCATCATGAATCTCGATGTGGTACACGCACGCACCAGTCCAAATAAGTACTCCTATCTAAAGTACTAG
More
|
|||||||
| Protein seq | MRPAGEGVGAAGSRILPPPPSGAAEVETKAAGAPLSDRATVAATLFQVIDNELGFVTDYYHSVLPVMLASPFFLLVNYIVFPSSDIKRDNYAVSFGLLRRCGSLGVAVFLLSNWFTVSMVVRRRWPRQSAGTSRRSRPWWRRVPARAAHAYGIKTAPLLAFYASASSALVALSVSVCSPEKKLVVPESVCGRPLGLQFHHASGDLYVADAYLGLLRVPARGGLAKVVTTEAIDVPFNFLNRKILHYTIAHNKSKHTQALRHHTKEPFLFFLNGFDVDQRTGDVYLTDSSSTYRRRVSIVYGTLKRSNAKHKPRSRSAPQPARVPEPRHSIRRASRCIPRARAVVADRLVAAAVTLCRACSHLSPVSPLRSKPPRLSFQTDIAALKAPGALPLFSSRCPIASTPLLPPPSELNLAPPFIAKRRESRSTSSLPVASRRRPDRCRRSPPSPPVHRSTRSSPASLGIAPLNPTLATDSRSRVDALTAGNWPLVTSSPFPPFLSAGCRSHNPSLTDSLRRIQAVGSLPLILPRHPGVRPVAPHRRKASRRNRRRLPSIRGRRLRLPPASPRGSHVGAMSAPARPRSGRADPGQPLPCASEIVHSARVSTAAFKLKIVKTSWVKLGFYKRLGKPDTWVGACELNEFSKTADRGTYRVYGFPLLHLRTVSLEFHPNIRQYTYDKMHEELLATIDEMHVEVQGTMVYQLKLATDRPDEAANKYHVGVHRMPHDRHMHACMHHVIYCTSIGVIMNLDVVHARTSPNKYSYLKY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g59300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0031920 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0032690 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0032260 | RBH | 0.0 | 1.768901 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0032120 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0032390 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0556800 | RBH | 0.0088645 | 0.9976015 | 0.0922595 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0031000 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0562800 | RBH | 0.048037 | 6.627797 | 0.0361925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0031470 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0031290 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0031400 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0031990 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0031950 | RBH | 0.0 | 3.728535 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G031460 | RBH | 0.0 | 0.713568 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0031200 | RBH | 0.0 | 0.000000 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C04g18078 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: J4155S | J4155S | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_04g0317800 | SBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_04g0384900 | SBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0407876200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0417400400.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_017885 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0414882400.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0416709800.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0408744200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0409970200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0412484600.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0408722800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0408683600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0407784000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0409395800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0416489800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0410080800.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0407871800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0407868600.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0409958200.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0409533000.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0421315200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0412525800.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0407777400.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0407805800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0409536200.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0409712200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0413163000.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0406027900.01 | RBH | None | None | None |
