Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0363000 | OGI:12069400 | 35/50 | Minghui 63 | MH63RS3 | HZAU | Chr12:25694794-25696166 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | CTGGGAAGGAGTATATATTGGCATATAAGAAATTGATGTTCATCCATGACATTACAGACTAATTAAGAACATTACAACTTAGGCCTTAGCATAACAGCACATATTGTTCAGGAGATTACATCATAATAACTTAGGATGGCAGTACATAGTGCCAGACAAAATTGGTGATGTTCGGCCATCACACTAATTAAGAACATGGATAGTAAGACTAAGCAGCTCGTCAATCTGTGTGAACTGAAACACACAGACATCATCCATCATGAATGGGTCGGCGTCGACCAAGCGATTCCAGCCGGTTGTTATCAAAGCCCTGTCATCCTGGGATTTCATCAGTTTCATCAGATATGTATCTATTGATCCATGCATAGACACCATGAGATTGTCCATTGGGCTGCTCTCAATGTGCTTGAGTAGGTACCTCAAGCTAAAAACAGTCGAAAAGGTCTGAAAAACAACATTATTTCAGTACAAACAACAAGTGGTAAATACAAACTGTACTACATCAATTCAATGTCCATACCATTTTCCCTTTTTCAACACAAGTTTTTTTCAATGTGCAATGGAAGAGTGGAATCTTAGGCAAATTGACTGCGGCAATATGAGCAAGTTGTTGCTGCATACTGCGTGTCAACGTTACGTCATTTCCATACCAACAGTACTTATCGAAACCACTGAAAGTATTGTCCTATAAAATAAAATTAGTAGACAACAACAAATGGATGGGTTTTTTTTGTCGGTAGAGAGAACAAATGCATTCAAGGTAGTGACAAATTTCACACCTATTGTGACTGTAGAACGGCGCACGCTTCGATAAATTTTCCTTCTCTCAACCTCTTCTGCACGAGTTTAATCAAATCCTATAACACCTTGCATGTCCAAAAATAATTGAAATGACAGTTGGGTTAAGAAAGCAAACCATCATCACTGTCTGAGTTAACGATTACTTCGTTTGCATCAGCCATTGCTAGTTGGGTGATGCACTGGTAAGCATGTTTTGCGAGATTATATTTCATCAGTTTCATCGGATTTGTATAATCAAAATTGATTATTAGAGGAAGCAAAACCAACCTGGAAGCCTCCTCCCGGGCTGTACAACCGCCGGCTCCCGGTTCCCGGGCCGACCGACCGCCTCCCCCGGCGCCGCGCGACCGCCGGCTCCCGGGCCGAGCGACCGCCGCCGACCACCAGCCCCGTGCCTCTTCTTCGAGCAGATGGAGAGGTTTCTGGAAGGGGAGAGGACTCTGCAAGAGTAGAGGTTGGGTGGGTTAATGTGAGATTGATGGGTGGGTTAATGTGAGTTTCTGGTGTAGGCATTAATTTTGATTGGTCAATGTACGGAGTATGTACTGTATTGCTGACTTGCTGTGGTACAT
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| CDS seq | MPTPETHINPPINLTLTHPTSTLAESSPLPETSPSARRRGTGLVVGGGRSAREPAVARRRGRRSVGPGTGSRRLYSPGGGFQCITQLAMADANEVIVNSDSDDEEVERRKIYRSVRRSTVTIGDNTFSGFDKYCWYGNDVTLTRSMQQQLAHIAAVNLPKIPLFHCTLKKTCVEKGKMTFSTVFSLRYLLKHIESSPMDNLMVSMHGSIDTYLMKLMKSQDDRALITTGWNRLVDADPFMMDDVCVFQFTQIDELLSLTIHVLN |
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| Protein seq | MPTPETHINPPINLTLTHPTSTLAESSPLPETSPSARRRGTGLVVGGGRSAREPAVARRRGRRSVGPGTGSRRLYSPGGGFQCITQLAMADANEVIVNSDSDDEEVERRKIYRSVRRSTVTIGDNTFSGFDKYCWYGNDVTLTRSMQQQLAHIAAVNLPKIPLFHCTLKKTCVEKGKMTFSTVFSLRYLLKHIESSPMDNLMVSMHGSIDTYLMKLMKSQDDRALITTGWNRLVDADPFMMDDVCVFQFTQIDELLSLTIHVLN |
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| Function | B3 domain-containing protein Os03g0164300 [UniProtKB/Swiss-Prot:B7EIH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0363000 | OsMH63_12T0363000-mRNA-1 | Chr12 | 25694794 | 25696107 | - | maker | ||
| CDS seq | ATGCCTACACCAGAAACTCACATTAACCCACCCATCAATCTCACATTAACCCACCCAACCTCTACTCTTGCAGAGTCCTCTCCCCTTCCAGAAACCTCTCCATCTGCTCGAAGAAGAGGCACGGGGCTGGTGGTCGGCGGCGGTCGCTCGGCCCGGGAGCCGGCGGTCGCGCGGCGCCGGGGGAGGCGGTCGGTCGGCCCGGGAACCGGGAGCCGGCGGTTGTACAGCCCGGGAGGAGGCTTCCAGTGCATCACCCAACTAGCAATGGCTGATGCAAACGAAGTAATCGTTAACTCAGACAGTGATGATGAAGAGGTTGAGAGAAGGAAAATTTATCGAAGCGTGCGCCGTTCTACAGTCACAATAGGTGACAATACTTTCAGTGGTTTCGATAAGTACTGTTGGTATGGAAATGACGTAACGTTGACACGCAGTATGCAGCAACAACTTGCTCATATTGCCGCAGTCAATTTGCCTAAGATTCCACTCTTCCATTGCACATTGAAAAAAACTTGTGTTGAAAAAGGGAAAATGACCTTTTCGACTGTTTTTAGCTTGAGGTACCTACTCAAGCACATTGAGAGCAGCCCAATGGACAATCTCATGGTGTCTATGCATGGATCAATAGATACATATCTGATGAAACTGATGAAATCCCAGGATGACAGGGCTTTGATAACAACCGGCTGGAATCGCTTGGTCGACGCCGACCCATTCATGATGGATGATGTCTGTGTGTTTCAGTTCACACAGATTGACGAGCTGCTTAGTCTTACTATCCATGTTCTTAATTAG
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| Protein seq | MPTPETHINPPINLTLTHPTSTLAESSPLPETSPSARRRGTGLVVGGGRSAREPAVARRRGRRSVGPGTGSRRLYSPGGGFQCITQLAMADANEVIVNSDSDDEEVERRKIYRSVRRSTVTIGDNTFSGFDKYCWYGNDVTLTRSMQQQLAHIAAVNLPKIPLFHCTLKKTCVEKGKMTFSTVFSLRYLLKHIESSPMDNLMVSMHGSIDTYLMKLMKSQDDRALITTGWNRLVDADPFMMDDVCVFQFTQIDELLSLTIHVLN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0363000 | OsMH63_12T0363000-mRNA-2 | Chr12 | 25694977 | 25696107 | - | maker | ||
| CDS seq | ATGCCTACACCAGAAACTCACATTAACCCACCCATCAATCTCACATTAACCCACCCAACCTCTACTCTTGCAGAGTCCTCTCCCCTTCCAGAAACCTCTCCATCTGCTCGAAGAAGAGGCACGGGGCTGGTGGTCGGCGGCGGTCGCTCGGCCCGGGAGCCGGCGGTCGCGCGGCGCCGGGGGAGGCGGTCGGTCGGCCCGGGAACCGGGAGCCGGCGGTTGTACAGCCCGGGAGGAGGCTTCCAGTGCATCACCCAACTAGCAATGGCTGATGCAAACGAAGTAATCGTTAACTCAGACAGTGATGATGAAGAGGTTGAGAGAAGGAAAATTTATCGAAGCGTGCGCCGTTCTACAGTCACAATAGATACATATCTGATGAAACTGATGAAATCCCAGGATGACAGGGCTTTGATAACAACCGGCTGGAATCGCTTGGTCGACGCCGACCCATTCATGATGGATGATGTCTGTGTGTTTCAGTTCACACAGATTGACGAGCTGCTTAGTCTTACTATCCATGTTCTTAATTAG
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| Protein seq | MPTPETHINPPINLTLTHPTSTLAESSPLPETSPSARRRGTGLVVGGGRSAREPAVARRRGRRSVGPGTGSRRLYSPGGGFQCITQLAMADANEVIVNSDSDDEEVERRKIYRSVRRSTVTIDTYLMKLMKSQDDRALITTGWNRLVDADPFMMDDVCVFQFTQIDELLSLTIHVLN |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0363000 | OsMH63_12T0363000-mRNA-3 | Chr12 | 25694977 | 25696166 | - | maker | ||
| CDS seq | ATGTACCACAGCAAGTCAGCAATACAAGTCCTCTCCCCTTCCAGAAACCTCTCCATCTGCTCGAAGAAGAGGCACGGGGCTGGTGGTCGGCGGCGGTCGCTCGGCCCGGGAGCCGGCGGTCGCGCGGCGCCGGGGGAGGCGGTCGGTCGGCCCGGGAACCGGGAGCCGGCGGTTGTACAGCCCGGGAGGAGGCTTCCAGAAGAGGTTGAGAGAAGGAAAATTTATCGAAGCGTGCGCCGTTCTACAGTCACAATAGATACATATCTGATGAAACTGATGAAATCCCAGGATGACAGGGCTTTGATAACAACCGGCTGGAATCGCTTGGTCGACGCCGACCCATTCATGATGGATGATGTCTGTGTGTTTCAGTTCACACAGATTGACGAGCTGCTTAGTCTTACTATCCATGTTCTTAATTAG
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| Protein seq | MYHSKSAIQVLSPSRNLSICSKKRHGAGGRRRSLGPGAGGRAAPGEAVGRPGNREPAVVQPGRRLPEEVERRKIYRSVRRSTVTIDTYLMKLMKSQDDRALITTGWNRLVDADPFMMDDVCVFQFTQIDELLSLTIHVLN |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0363000 | OsMH63_12T0363000-mRNA-4 | Chr12 | 25694796 | 25696107 | - | maker | ||
| CDS seq | ATGCCTACACCAGAAACTCACATTAACCCACCCATCAATCTCACATTAACCCACCCAACCTCTACTCTTGCAGAGTCCTCTCCCCTTCCAGAAACCTCTCCATCTGCTCGAAGAAGAGGCACGGGGCTGGTGGTCGGCGGCGGTCGCTCGGCCCGGGAGCCGGCGGTCGCGCGGCGCCGGGGGAGGCGGTCGGTCGGCCCGGGAACCGGGAGCCGGCGGTTGTACAGCCCGGGAGGAGGCTTCCAGTGCATCACCCAACTAGCAATGGCTGATGCAAACGAAGTAATCGTTAACTCAGACAGTGATGATGAAGAGGTTGAGAGAAGGAAAATTTATCGAAGCGTGCGCCGTTCTACAGTCACAATAGGTACCTTTTCGACTGTTTTTAGCTTGAGGTACCTACTCAAGCACATTGAGAGCAGCCCAATGGACAATCTCATGGTGTCTATGCATGGATCAATAGATACATATCTGATGAAACTGATGAAATCCCAGGATGACAGGGCTTTGATAACAACCGGCTGGAATCGCTTGGTCGACGCCGACCCATTCATGATGGATGATGTCTGTGTGTTTCAGTTCACACAGATTGACGAGCTGCTTAGTCTTACTATCCATGTTCTTAATTAG
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| Protein seq | MPTPETHINPPINLTLTHPTSTLAESSPLPETSPSARRRGTGLVVGGGRSAREPAVARRRGRRSVGPGTGSRRLYSPGGGFQCITQLAMADANEVIVNSDSDDEEVERRKIYRSVRRSTVTIGTFSTVFSLRYLLKHIESSPMDNLMVSMHGSIDTYLMKLMKSQDDRALITTGWNRLVDADPFMMDDVCVFQFTQIDELLSLTIHVLN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0363000 | OsMH63_12T0363000-mRNA-5 | Chr12 | 25695511 | 25696107 | - | maker | ||
| CDS seq | ATGCCTACACCAGAAACTCACATTAACCCACCCATCAATCTCACATTAACCCACCCAACCTCTACTCTTGCAGAGTCCTCTCCCCTTCCAGAAACCTCTCCATCTGCTCGAAGAAGAGGCACGGGGCTGGTGGTCGGCGGCGGTCGCTCGGCCCGGGAGCCGGCGGTCGCGCGGCGCCGGGGGAGGCGGTCGGTCGGCCCGGGAACCGGGAGCCGGCGGTTGTACAGCCCGGGAGGAGGCTTCCAGTGCATCACCCAACTAGCAATGGCTGATGCAAACGAAGTAATCGTTAACTCAGACAGTGATGATGGTTTGCTTTCTTAA
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| Protein seq | MPTPETHINPPINLTLTHPTSTLAESSPLPETSPSARRRGTGLVVGGGRSAREPAVARRRGRRSVGPGTGSRRLYSPGGGFQCITQLAMADANEVIVNSDSDDGLLS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0564285 | 0.1466095 | 7.200529 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0591300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g40070 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0591300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0019210 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0019320 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0022230 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0021210 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0395000 | RBH | 0.0876175 | 0.0516655 | 3.234631 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0018690 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0018920 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0018840 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0075270 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0019050 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G021230 | RBH | 0.000000 | 0.000000 | 2.720004 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0020980 | RBH | 0.000000 | 0.0 | 4.799423 |
| Os XI: R9311 | R9311 | AGIS | R9311C12g40263 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_12g0218600 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_12g0226100 | SBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_12g0246300 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_12g0223400 | SBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G1224838600.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G1239295000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G1234796200.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1237411200.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG1228732400.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G1234952400.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1233386000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G1227720800.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G1223748600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G1219440200.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G1229031600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G1237325800.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G1224436800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG1235967200.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G1219408500.01 | SBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG1225531800.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG1226958800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG1233861600.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G1222158800.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G1224876700.01 | SBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G1246857200.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG1232995200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG1228422000.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG1223312400.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G1228998000.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG1231370200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G1233191700.01 | SBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G1233485200.01 | RBH | None | None | None |
