Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0472800 | OGI:07079200 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr07:30218743-30221447 | ||||||||
| Gene Symbol | WOX11,OsWOX11,OsWOX12A,Os | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CACAACTATCAAAGCTTAGCTAAGTTACTAGCTGCTTCTTCTCCTATAAGTAGGGCGATCTCACTCTCTCGCAGCAAGCCAATTAAGCGAATTAAGCACACATCAATTGACCAAACCTATCTCTCTATCTCTCTCGAGCTAGCGAGCTCTAGGTGTTCGACACCGAACAAGGCAGCTAGCTAGTGGCGATGGACGGCGGCCACAGCCCGGACAGGCATGCGGCGGCGGCGGCGGGGGAGCCGGTGAGGTCGCGGTGGACGCCGAAGCCGGAGCAGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCGCAGGCGCAGGCGGCCGCGGCCGCCGCCTCGTCGGGATCTCCTCCGACTGCTTCGTCCGGTGGCCTCGCGCCTGGCCACGCCGGCTCGCCGGCTTCGTCGCTCGGGATGTTCGCGCACGGCGCCGCCGGGTACAGCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGATGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGATGGGGTACATGGACGGCGGCGGCGGCTCGTCGTCGTCGGCGGCCGCCGGTCAGCATCAGCAGCAGCAGCTCTACTACTCGTGTCAACCTGGTGAGCCCTTCATACATGATGCATGTCCCCCCAATTTCCATTCGTCGGTGCTTTGATTAATTTGCCTTTAATTTCTCTCTAACTAAACATGCACATATATAGCTAGTTTTTAGCATATATATACATGTTTAATTACGCATGCAGATGCAGTGATGAGGGGTATTAGTTGTTCCGTTTGGTGCTAATAATTCTTGCTCTCCTAGTACAAATTCAGAGAGAGAAAATTCCTTTCAGTCTCTCTTTGCTTCGATCGATCTCTTCTAGAGTATTAAGGGACATGTACATACGATCATATTACTGCATATATACACTTGATCGATCGTTTCATCTTCCAGAAACTCATATTTTGTCTTCCTTAATTTTAATTTGTCCTTATTTTGATCTTCCGCGTTGAATGTCTTTGAGACTTTGCACTTGTATTTTTGCGGTAATTGAGATTGGGAACGATCAATTACGCAGTACTAGCTAGTGTACTACACTGAAATAAGAGAATTAAGGGCAAAGCTTTGTCTTGTTCTTTTATCTTAGTAGTAGCAAATATGCTTCATGCATGCATACTAAATAAACTAATACTGCCAATTTATCCATGCACGCATATATAATCGTACTACATTATATGCATATGGAGTATATATAATGCAATTAATACTAGCTAGTAGTTGAATTGTTGCATGCGTGAATGGCGCAATACAATATATGTACTTAATTATGCAGATGCATGCATGTTTTTGTCATGGATTTGTAGATATGCATGAGTATACATATAATTTAGACATAGGGCTGATACTAGCTAGGACACTGAATTTCTAACCACCGGCCAGCCGATCAATGGTAGTACTACTTATTATTAGTTAATCATCAAGTAAAGCCACCTATTGATCGATCGATCATATATATGTACACTGTATATATCACTCCAGTTGTAGTAGGAGTAGTACTTTTGCAATAATTGAGAAGTAGTCCTTGTCCGAAGTGACATTAGATATGTAGGTAATGTGAATTGGGAAAGAAAAATGATGGATGAATATGATATGTGCAGCGACGATGACGGTGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGGACCGATCGATCTGAGATCAATGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGTACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCAGTCTCAGCCCTGATCGATCGCTAGCTACTAATTCGATTCTGTCATCACAATGCACGTCACTAAGCTAACTAGCTATATACCCTGTCAATTAATTACTTACTTACAGAACAATTAATTAATCGATCTATAGTCAATTAATTAACAAGGCGTTGCATCATCTATGTATATATGACAGGTCACGAGGTCGTCTTGATCGAGTTGAGCGATTCGTCGATTGATTGATCGATGGCAACGTACGTATTGTGTCAGCAAGATTTAGGTACCCCTTGTCCGTTGGATCAGATCGATATGCAAGCAACGCATGCTTTGCAGGTGCCGGCCGGTTAATTACGCGATCGATCGAGCTAGCAGATGATGAATGCTGCACGTACGCATGGCAATTGTCACTGCGACGAGCCTGCATATATATGAACGATCCATTGATCGTCATTCTAGCGACCAAGCAGCACGATAGTACAAGTATATACTATACAATGCAATTGCAGCGACGAACTAGTTAATTATAATACAGATAATGCATGTGTACTTCTGTGGCCATACATATATATATAGAGAGAGAGAGGGGATTAATTACTATATTCGTTTTTCATCTAGCTGGTCGATCTCTGTGTACTTGTATGTATCCCGTTCTCGATCTTTATATCAGAATATTTTATATATGTATATTTTACAATTATATATATAGCCGTCTCGATCGCCAAGC
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| CDS seq | ATGGACGGCGGCCACAGCCCGGACAGGCATGCGGCGGCGGCGGCGGGGGAGCCGGTGAGGTCGCGGTGGACGCCGAAGCCGGAGCAGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCGCAGGCGCAGGCGGCCGCGGCCGCCGCCTCGTCGGGATCTCCTCCGACTGCTTCGTCCGGTGGCCTCGCGCCTGGCCACGCCGGCTCGCCGGCTTCGTCGCTCGGGATGTTCGCGCACGGCGCCGCCGGGTACAGCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGATGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGATGGGGTACATGGACGGCGGCGGCGGCTCGTCGTCGTCGGCGGCCGCCGGTCAGCATCAGCAGCAGCAGCTCTACTACTCGTGTCAACCTGCGACGATGACGGTGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGGACCGATCGATCTGAGATCAATGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGTACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCACGAGGTCGTCTTGA
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| Protein seq | MDGGHSPDRHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS |
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| Function | WUSCHEL-related homeobox 11 [UniProtKB/Swiss-Prot:Q0D3I7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0472800 | OsMH63_07T0472800.1 | Chr07 | 30218743 | 30221447 | + | maker | ||
| CDS seq | ATGGACGGCGGCCACAGCCCGGACAGGCATGCGGCGGCGGCGGCGGGGGAGCCGGTGAGGTCGCGGTGGACGCCGAAGCCGGAGCAGATACTCATCCTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCCCGCCGCCGCCAGCGCCAGCTGCAGGCGCAGGCGCAGGCGGCCGCGGCCGCCGCCTCGTCGGGATCTCCTCCGACTGCTTCGTCCGGTGGCCTCGCGCCTGGCCACGCCGGCTCGCCGGCTTCGTCGCTCGGGATGTTCGCGCACGGCGCCGCCGGGTACAGCTCCTCGTCGTCCTCATCGTGGCCGTCCTCGCCGCCGTCGGTGGGGATGATGATGGGGGACGTGGACTACGGGGGCGGCGGCGACGACCTGTTCGCCATCTCGAGGCAGATGGGGTACATGGACGGCGGCGGCGGCTCGTCGTCGTCGGCGGCCGCCGGTCAGCATCAGCAGCAGCAGCTCTACTACTCGTGTCAACCTGCGACGATGACGGTGTTCATCAACGGAGTGGCGACGGAGGTGCCAAGGGGACCGATCGATCTGAGATCAATGTTTGGGCAGGACGTGATGCTGGTGCATTCAACGGGTGCTCTTCTTCCAGCCAACGAGTACGGCATCCTCCTCCATTCTCTCCAGATGGGCGAGAGCTACTTCCTGGTCACGAGGTCGTCTTGA
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| Protein seq | MDGGHSPDRHAAAAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQLQAQAQAAAAAASSGSPPTASSGGLAPGHAGSPASSLGMFAHGAAGYSSSSSSSWPSSPPSVGMMMGDVDYGGGGDDLFAISRQMGYMDGGGGSSSSAAAGQHQQQQLYYSCQPATMTVFINGVATEVPRGPIDLRSMFGQDVMLVHSTGALLPANEYGILLHSLQMGESYFLVTRSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.142162 | 0.4955175 | 1.8502675 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0684900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48560 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0684900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028070 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028120 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027910 | RBH | 0.0 | 1.502930 | 0.254555 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027700 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028010 | RBH | 0.0 | 2.694478 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0197400 | RBH | 0.007297 | 2.4930205 | 0.8010475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028440 | RBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0486700 | RBH | 0.550267 | 1.6508605 | 1.180697 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027730 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028180 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027900 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028230 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027790 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027860 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027610 | RBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C07g27787 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_07g0325900 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_07g0331200 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_07g0319900 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_07g0332000 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0712824500.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0726463700.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_027570 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0723636900.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0725609900.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0717225100.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0720352500.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0721497900.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0716786900.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0714178700.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0712728100.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0717305900.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0725349300.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0717732900.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0720732100.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0716032100.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0712858100.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0712857300.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0720000700.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0714981500.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0716096100.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0732389900.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0721199700.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0716623300.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0712775700.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0718309300.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0718878500.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0721938300.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0718087500.01 | RBH | None | None | None |
