Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_03G0197400 OGI:03031810 | 49/50 Minghui 63 | MH63RS3 | HZAU Chr03:12167676-12171675
Gene Symbol OsWOX12B,WOX6,WOX12B,OsWOX6,Os
Mutant -
Stuctural Variations

-

DNA seq

TGATGCATACAAACATTAGAATCTTCACTACTCAATATATTGTTGATATCATATATAGTATACACTTGAACATTGATAGCTTAGCTGTAGAGTGAAAAGGAGTCAAGCCTTTGCCGACATATGCACGGCTGCACGCTAAAGACAAATTAAGTACAAAGAAAAATGGTAGTTTAAATTCCAACCGGCCTTGAATCAAGCACCAACATTCCAGGCGCGTTTGGCTGACACATATAGCATTACATCACACGGTAAAAAAAAAAAACAATACAAACGTGCATCTATAGCTAGCACAAATTAAAGAATATATATAGCTCGACTGCCAAGGGCAGGCATGCATACATGCATATTGTAATGGAATTGTGAAAATGATGAGAAGAGACGCGACCATATTGTAATCTGTATTCTAAGGACAACAAACTCGACCGCCCACGCTTTCATAGGTTTTTAATTAAGGGGCATATATATAAGTACGTAGTTGTACTTTTGCCGATCGATATGCTGCAATGCATGCATTAATTTGCTTCTCGTACCTAGCTAATATATATAGTCTTGTTCTCGATAGACGATTGATCGATTTAGACATACTCCAAGGTCTTGAATCCAAGACAGCATTCTTGATTGATGATTAACTGAGAACTAGCTGCACCCCGGCCGGCTCATGCATCTGATCCAATGAGTATCGAGTAGAGATATATATCTGACTATCTACTGCAAGGATAGATCGAGAGCTCGTTTTTAAGTTGGCCTAGCGACCTGTCGATCAGGAAACACAACACATTGAAGATGATCAGAAACACACATACACACATATAAATGTACTCCTCATTAAGCAGGAAATTAAGAAGATCACAACAATAGCTAGCTATGCATTTCACAATTCACACAAACATGCATGCAATTAATTAAATTAATAGTAATTAGTTTTGCACATTTCAAACATGATACACATATATAAGCATGAATGCATGCCTAAAAATGTGGTGCTTTCATGAAGACGAAACTGCATTGACTGATCGGAGTAGAGAGAGAGCGATGAGACCAGCTAGTAAGAGCTTGGAGATGGATGGTTACCAGAAAGTAGCTCTCTCCGATTTGGAGGCTCTGCATTAGGATTCCATAGTCGTTGACTGGGAGGAGGGCCCCAGTAGAGTGGACGAGCATCACATCCTGGCCGAACATGGCTCGCAAGTCTATTGGACCCCTCGGCATCTCCATTGGGACTCCGTTGATGAACACCGTGATCGTCGCTGGAATTAGCAGGCAATCAAACCAGCAACCAATCAGCATCTAGCCAGCATATATATAATCCACTCACAAGAAATATCAACAGCTCATTGACGACAAAATTAGCAACAAACAGATGCAGAAGCTAGCCAAACAAATTATCCAATGATGAGATTATCAATATCGTTAATTAGTTGGTCGGTACTCGGTACTACCGTTTACTCCCCAGTTGGGAGTTGGGACTTTGGGACCTCTAATCCTTTATCATATTGGCATATGCACCTAGTCTATTTGATTCCAATAAGAGTTCTGCAAATGCATGAGAGGATATTCTGAAATTATATTGTTGCTCCATCTGCAATAGCATGCATGGGCATTACACACATTTGCATGCATGCGACATGCATGAATTATACTGTGGCTTGTTTTTAGCTCAGAATTAAGTAGCTAGTTGGTAAATTAATTGATGATAGATTGTACATATAACATGTCAGTAAGAAAGCAAGAAAAATTACCAAAGTAGGATGGATTGCTCATGCATGCATGCATTTAGTAAATCATAATAATGTAACCAAAGTTACATTGCCAAAATTAATTTACTATTTGACATACAGGCATCAAATGATTGGATCATGCATAAACATGTGTGCTAACTCTATTGTGTGCTACATGGAGCTTCAAATGGATATAATTGACAAAAAAACATATACACGGTGAGAAGAATCTGAAGACAGTTGGGTGGGTGCATGCATGCTTAGAATCTATGGAAAATTACTAATGTGTTTATTTTGTAATTTTCATTTTTGGGTATTGGTTAATTTTTAAAATTGTATGATACATCCTAGAATTATAGGAGTATTTCTTCCGTCCTATAATATAGCAACATAATACTAGATGGGACACATTCTAATACTAGGAATTTGGATAGACTATCTATCCAGATTTGAAGTAGGATATGTTCCATCCATTACTAGATTCTTATATTTTTGAGATGGAGGGAGTACTTTCTAGTGTATGCATATCATTAACACCAGGCAAGGCTCCCTAAAATTTTGAAAATTGTACAATTCAGTCTGGAATACACCGTACAAGTAATTAAGAACATAGCTAGACACAAGAGCAAGGCTTCGCAAAACGTAGGAACATATCATTGTGATCTTTCAAAAGGAAAGTGTCATGCATGGTGAATTATTATGTAGTATGATCTTATGTGCCGGTACACTAGCTAGGAAGTGTAAGTTGTAACCGAAATAGTATAGTGAAGAGCTAAAGAACAAGAACTGACACAATTAATTATATGGAAGGCCAAATAAAGTATGCACACGCAAAAGATCCAAACTAGATCTCCTTGAATTCTGCAGCACTACAATACAAACAGACAAAATTTTAGTGGTGAAATGATCAGCATATTTACACCTTCATAAGTTTCTTCGATCAGGTGATATATGCAGTATAGTAGTAGAAATCACAATAACTTGTAAAATCACAAGAGTAAGTGTGTTAAGATTAGAGCCATTTCGATGAAAAGATGAACAAATTAATAAATAACCTAATCCCTTAAGCGATCGAGACATGGGAAACACATGCATGAGAATACGAGATTGATCGGTGAGTACTGAGTAGCTAACCAACCAAATATTGAAGGGAAGAAATAGCAAATTAGCAATGGCCAAAACCAAGATTGATGTGGTAACTGATCAACTCACCTGCAGGTAATTGGCATGAGTAGAACTGCTGCTGCGCGGCGGTGGCCGCGGAGCTCGGCGTCGCCGGCGAGCTGGCCGGCGAGCAGCGAGGGCTCCCCACAAACCCCATCTGCCTCGAGATGGCGAAGAGATCGTCGCTTCCCCCGCTGTCCACCACATCCCCCATCAGCCCGGGCGCCAGCGCCGACGACGCCGACGCGGACGCGCCGCACGACGCCTGCAGGTACCCGCCGGCGCCGGAGGCCCCCGCGCCGTGCGCGAACAGCCCCAGCGACGAACCTCCCGTGCTGCCGGACGACGACGACGAGCTCGCCTGCTGCTCGTACTGGCACGCGCTCCCACCCATGGCCATGGTGTGGACGACGGCGACGGGCGGGAGGCCCACCTGCACGGTGGCGGCGCTCGCGGCTGCGGGAGAGGTGTTGGCGGATGGGGAAGAGGAAGAGGCCGCCGCTGCGGCGGCGGCGGCGGCCGCCTGCATCTGGCGCTGGCGGCGGCGCGAGCGCGAGCGGCGGTTCTGGAACCAGTAGAAGACGTTGGCGTCGCCGACGGCGCCGAACCTCTCGAGCAGCTTGCGGATGCGGACGGTCTCGTCCTTGGGCGGGTTGACCATGCCGCTGTTGAAGATGGACTCCAGGATCAGTATCTGCTCCGGCTTGGGCGTCCACCGCGACCGCACCGGCTCGCCGGCGGCGCTCCGCCCTCCTCCTCCACCGCTTCCCCCGCCGCCGCGCTCCTCCGGCGGGCTGCCGCCCGACGACTGCCTATCCGGGCTATTACTGCTCCCCTCCATCGATCGATCGACCGATCGTCGGGAGATAGGGTAAGTAAAAGATCGAGCGTTGGTTACCTCGGAATCTTGGTTCTTGGATGTGTGTGTGAGTGACACAACACGAGTTGCAGCACGCGCTACGTGTGAAGCAGTAGCTAGGTTTCAATAAGCGAGAGAGGATCGGAGTAGTATAGCTAGCTAGCTTGAGAGGAGGCAACAACAATTAAACCATGCTTGCACACTCATGTCCTTGTGAGGGGTTGTACTTATAGGAGAAGGGTTGGCCTAGGTAGGGAAG

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CDS seq

ATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAGGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGTCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTAACCATCCATCTCCAAGCTCTTACTAGCTGGTCTCATCGCTCTCTCTCTACTCCGATCAGTCAATGCAGTTTCGTCTTCATGAAAGCACCACATTTTTAG

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Protein seq

MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVTIHLQALTSWSHRSLSTPISQCSFVFMKAPHF

Function WUSCHEL-related homeobox 6 [UniProtKB/Swiss-Prot:A2XG77]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0197400 OsMH63_03T0197400.1 Chr03 12167676 12171675 - maker
CDS seq

ATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAGGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGTCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTCGCTAGGCCAACTTAA

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Protein seq

MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVARPT

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Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0197400 OsMH63_03T0197400.2 Chr03 12168485 12171675 - maker
CDS seq

ATGGAGGGGAGCAGTAATAGCCCGGATAGGCAGTCGTCGGGCGGCAGCCCGCCGGAGGAGCGCGGCGGCGGGGGAAGCGGTGGAGGAGGAGGGCGGAGCGCCGCCGGCGAGCCGGTGCGGTCGCGGTGGACGCCCAAGCCGGAGCAGATACTGATCCTGGAGTCCATCTTCAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGAGGTTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCGCGCTCGCGCCGCCGCCAGCGCCAGATGCAGGCGGCCGCCGCCGCCGCCGCAGCGGCGGCCTCTTCCTCTTCCCCATCCGCCAACACCTCTCCCGCAGCCGCGAGCGCCGCCACCGTGCAGGTGGGCCTCCCGCCCGTCGCCGTCGTCCACACCATGGCCATGGGTGGGAGCGCGTGCCAGTACGAGCAGCAGGCGAGCTCGTCGTCGTCGTCCGGCAGCACGGGAGGTTCGTCGCTGGGGCTGTTCGCGCACGGCGCGGGGGCCTCCGGCGCCGGCGGGTACCTGCAGGCGTCGTGCGGCGCGTCCGCGTCGGCGTCGTCGGCGCTGGCGCCCGGGCTGATGGGGGATGTGGTGGACAGCGGGGGAAGCGACGATCTCTTCGCCATCTCGAGGCAGATGGGGTTTGTGGGGAGCCCTCGCTGCTCGCCGGCCAGCTCGCCGGCGACGCCGAGCTCCGCGGCCACCGCCGCGCAGCAGCAGTTCTACTCATGCCAATTACCTGCAGCGACGATCACGGTGTTCATCAACGGAGTCCCAATGGAGATGCCGAGGGGTCCAATAGACTTGCGAGCCATGTTCGGCCAGGATGTGATGCTCGTCCACTCTACTGGGGCCCTCCTCCCAGTCAACGACTATGGAATCCTAATGCAGAGCCTCCAAATCGGAGAGAGCTACTTTCTGGTAACCATCCATCTCCAAGCTCTTACTAGCTGGTCTCATCGCTCTCTCTCTACTCCGATCAGTCAATGCAGTTTCGTCTTCATGAAAGCACCACATTTTTAG

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Protein seq

MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVTIHLQALTSWSHRSLSTPISQCSFVFMKAPHF

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.007297 2.4930205 0.8010475

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0325600 RBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g20910 RBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os03g0325600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0016170 RBH 0.0 0.000000 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0016010 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0016030 RBH 0.0 1.158161 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0016020 RBH 0.0 0.030642 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0015830 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0472800 RBH 0.142162 0.4955175 1.8502675
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0015710 RBH 0.0 0.000000 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0201500 RBH 0.024327 6.5543875 0.566719
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0015970 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0015980 RBH 0.0 1.570190 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0016010 RBH 0.0 6.413163 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0015890 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0015830 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G015780 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0015680 RBH 0.0 2.055665 0.0
Os XI: R9311 | R9311 | AGIS R9311C03g11605 RBH None None None
Os XI-adm: HZ | HZ | PKU OsHZ_03g0175200 RBH None None None
Os XI-adm: J4155S | J4155S | PKU OsJ4155_03g0175300 RBH None None None
Os XI-adm: LK638S | LK638S | PKU OsLK638S_03g0161500 RBH None None None
Os XI-adm: XL628S | XL628S | PKU OsXL628S_03g0178800 RBH None None None
Os GJ-temp: 02428 | 02428 | SICAU Os02428G0304544000.01 RBH None None None
Os cB: Basmati1 | Basmati1 | SICAU OsBasmati1G0310879800.01 RBH None None None
Os O.glaberrima: Ogla | OglaRS2 | DIADE Oglab_007015 RBH None None None
Os XI-1A: CN1 | CN1 | SICAU OsCN1G0309827000.01 RBH None None None
Os XI-1A: D62 | D62 | SICAU OsD62G0310578800.01 RBH None None None
Os XI-1A: DG | DG | SICAU NA NA NA NA NA
Os GJ-temp: DHX2 | DHX2 | SICAU OsDHX2G0304546400.01 RBH None None None
Os XI-adm: FH838 | FH838 | SICAU OsFH838G0306157200.01 RBH None None None
Os XI-1A: FS32 | FS32 | SICAU OsFS32G0304985000.01 RBH None None None
Os XI-1A: G46 | G46 | SICAU OsG46G0305029000.01 RBH None None None
Os XI-adm: G630 | G630 | SICAU OsG630G0304500200.01 RBH None None None
Os XI-1B: G8 | G8 | SICAU OsG8G0304519000.01 RBH None None None
Os XI-1A: II32 | II32 | SICAU OsII32G0310342400.01 RBH None None None
Os XI-1B: J4155 | J4155 | SICAU OsJ4155G0304529400.01 RBH None None None
Os GJ-temp: Kosh | Kosh | SICAU OsKoshG0304534800.01 RBH None None None
Os GJ-temp: KY131 | KY131 | SICAU OsKY131G0303617800.01 RBH None None None
Os GJ-trp: Lemont | Lemont | SICAU OsLemontG0304569400.01 RBH None None None
Os GJ-adm: LJ | LJ | SICAU OsLJG0304561400.01 RBH None None None
Os GJ-sbtrp: NamRoo | NamRoo | SICAU OsNamRooG0304541000.01 RBH None None None
Os XI-1B: R498 | R498 | SICAU OsR498G0305857800.01 RBH None None None
Os XI-1B: R527 | R527 | SICAU OsR527G0305079200.01 RBH None None None
Os XI-1B: S548 | S548 | SICAU OsS548G0313703400.01 RBH None None None
Os XI-2: TM | TM | SICAU TMG0306510200.01 RBH None None None
Os XI-3: Tumba | Tumba | SICAU OsTumbaG0304481400.01 RBH None None None
Os XI-adm: WSSM | WSSM | SICAU OsWSSMG0304513600.01 RBH None None None
Os XI-1B: Y3551 | Y3551 | SICAU OsY3551G0304559400.01 RBH None None None
Os XI-1B: Y58S | Y58S | SICAU OsY58SG0304538800.01 RBH None None None
Os XI-adm: YX1 | YX1 | SICAU OsYX1G0306842200.01 RBH None None None
Os GJ-temp: ZH11 | ZH11 | SICAU OsZH11G0304579000.01 RBH None None None
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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