Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0015680 | OGI:03031810 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:12107970-12111893 | ||||||||
| Gene Symbol | WOX6, OsWOX6, Os WOX6, OsWOX12B, WOX12B | ||||||||||
| DNA seq | agaatcttcactactcaatatattgttgatatcatatatagtatacacttgaacattgatagcttagctgtagagtgaaaaggagtcaagcctttgccgacatatgcacggctgcacgctaaagacaaattaagtacaaagaaaaatggtagtttaaattccaaccggccttgaatcaagcaccaacattccaggcgcgtttggctgacacatatagcattacatcacacggtAaaaaaaaaaacaatacaaacgtgcatctatagctagcacaaattaaagaatatatatagctcgactgccaagggcaggcatgcatacatgcatattgtaatggaattgtgaaaatgatgagaagagacgcgaccatattgtaatctgtattctaaggacaacaaactcgaccgcccacgctttcataggtttttaattaaggggcatatatataagtacgtagttgtacttttgccgatcgatatgctgcaatgcatgcattaatttgcttctcgtacctagctaatatatatagtcttgttctcgatagacgattgatcgatttagacatactccaaggtcttgaatccaagacagcattcttgattgatgattaactgagaactagctgcaccccggccggctcatgcatctgatccaatgagtatcgagtagagatatatatctgactatctactgcaaggatagatcgagagctcgtttttaagttggcctagcgacctgtcgatcaggaaacacaacacattgaagatgatcagaaacacacatacacacatataaatgtactcctcattaagcaggaaattaagaagatcacaacaatagctagctatgcatttcacaattcacacaaacatgcatgcaattaattaaattaatagtaattagttttgcacatttcaaacatgatacacatatataagcatgaatgcatgcctaaaaatgtggtgctttcatgaagacgaaactgcattgactgatcggagtagagagagagcgatgagaccagctagtaagagcttggagatggatggttaccagaaagtagctctctccgatttggaggctctgcattaggattccatagtcgttgactgggaggagggccccagtagagtggacgagcatcacatcctggccgaacatggctcgcaagtctattggacccctcggcatctccattgggactccgttgatgaacaccgtgatcgtcgctggaattagcaggcaatcaaaccagcaaccaatcagcatctagccagcatatatataatccactcacaagAaatatcaacagctcattgacgacaaaattagcaacaaacagatgcagaagctagccaaacaaattatccaatgatgagattatcaatatcgttaattagttggtcggtactcggtactaccgtttactccccagttgggagttgggactttgggacctctaatcctttatcatattggcatatgcacctagtctatttgattccaataagagttctgcaaatgcatgagaggatattctgaaattatattgttgctccatctgcaatagcatgcatgggcattacacacatttgcatgcatgcgacatgcatgaattatactgtggcttgtttttagctcagaattaagtagctagttggtaaattaattgatgatagattgtacatataacatgtcagtaagaaagcaagaaaaattaccaaagtaggatggattgctcatgcatgcatgcatttagtaaatcataataatgtaaccaaagttacattgccaaaattaatttactatttgacatacaggcatcaaatgattggatcatgcataaacatgtgtgctaactctattgtgtgctacatggagcttcaaatggatataattgacAaaaaaacatatacacggtgagaagaatctgaagacagttgggtgggtgcatgcatgcttagaatctatggaaaattactaatgtgtttattttgtaattttcatttttgggtattggttaatttttaaaattgtatgatacatcctagaattataggagtatttcttccgtcctataatatagcaacataatactagatgggacacattctaatactaggaatttggatagactatctatccagatttgaagtaggatatgttccatccattactagattcttatatttttgagatggagggagtactttctagtgtatgcatatcattaacaccaggcaaggctccctaaaattttgaaaattgtacaattcagtctggaatacaccgtacaagtaattaagaacatagctagacacaagagcaaggcttcgcaaaacgtaggaacatatcattgtgatctttcaaaaggaaagtgtcatgcatggtgaattattatgtagtatgatcttatgtgccggtacactagctaggaagtgtaagttgtaaccgaaatagtatagtgaagagctaaagaacaagaactgacacaattaattatatggaaggccaaataaagtatgcacacgcaaaagatccaaactagatctccttgaattctgcagcactacaatacaaacagacaaaattttagtggtgaaatgatcagcatatttacaccttcataagtttcttcgatcaggtgatatatgcagtatagtagtagaaatcacaataacttgtaaaatcacaagagtaagtgtgttaagattagagccatttcgatgaaaagatgaacAaattaataaataacctaatcccttaagcgatcgagacatgggaaacacatgcatgagaatacgagattgatcggtgagtactgagtagctaaccaaccaaatattgaaGggaagaaatagcaaattagcaatggccAaaaccaagattgatgtggtaactgatcaactcacctgcaggtaattggcatgagtagaactgctgctgcgcggcggtggccgcggagctcggcgtcgccggcgagctggccggcgagcagcgagggctccccacaaaccccatctgcctcgagatggcgaagagatcgtcgcttcccccgctgtccaccacatcccccatcagcccgggcgccagcgccgacgacgccgacgcggacgcgccgcacgacgcctgcaggtacccgccggcgccggaggcccccgcgccgtgcgcgaacagccccagcgacgaacctcccgtgctgccggacgacgacgacgagctcgcctgctgctcgtactggcacgcgctcccacccatggccatggtgtggacgacggcgacgggcgggaggcccacctgcacggtggcggcgctcgcggctgcgggagaggtgttggcggatggggaagaggaagaggccgccgctgcggcggcggcggcggccgcctgcatctggcgctggcggcggcgcgagcgcgagcggcggttctggaaccagtagaagacgttggcgtcgccgacggcgccgaacctctcgagcagcttgcggatgcggacggtctcgtccttgggcgggttgaccatgccgctgttgaagatggactccaggatcagtatctgctccggcttgggcgtccaccgcgaccgcaccggctcgccggcggcgctccgccctcctcctccaccgcttcccccgccgccgcgctcctccggcgggctgccgcccgacgactgcctatccgggctattactgctcccctccatcgatcgatcgaccgatcgtcgggagatagggtaagtaaaagatcgagcgttggttacctcggaatcttggttcttggatgtgtgtgtgagtgacacaacacgagttgcagcacgcgctacgtgtgaagcagtagctaggtttcaataagcgagagaggatcggagtagtatagctagctagcttgagaggaggcaacaacaattaaaccatgcttgcac
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| CDS seq | atggaggggagcagtaatagcccggataggcagtcgtcgggcggcagcccgccggaggagcgcggcggcgggggaagcggtggaggaggagggcggagcgccgccggcgagccggtgcggtcgcggtggacgcccaagccggagcagatactgatcctggagtccatcttcaacagcggcatggtcaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagaggttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcgcgccgccgccagcgccagatgcaggcggccgccgccgccgccgcagcggcggcctcttcctcttccccatccgccaacacctctcccgcagccgcgagcgccgccaccgtgcaggtgggcctcccgcccgtcgccgtcgtccacaccatggccatgggtgggagcgcgtgccagtacgagcagcaggcgagctcgtcgtcgtcgtccggcagcacgggaggttcgtcgctggggctgttcgcgcacggcgcgggggcctccggcgccggcgggtacctgcaggcgtcgtgcggcgcgtccgcgtcggcgtcgtcggcgctggcgcccgggctgatgggggatgtggtggacagcgggggaagcgacgatctcttcgccatctcgaggcagatggggtttgtggggagccctcgctgctcgccggccagctcgccggcgacgccgagctccgcggccaccgccgcgcagcagcagttctactcatgccaattacctgcagcgacgatcacggtgttcatcaacggagtcccaatggagatgccgaggggtccaatagacttgcgagccatgttcggccaggatgtgatgctcgtccactctactggggccctcctcccagtcaacgactatggaatcctaatgcagagcctccaaatcggagagagctactttctggtaaccatccatctccaagctcttactagctggtctcatcgctctctctctactccgatcagtcaatgcagtttcgtcttcatgaaagcaccacatttttag
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| Protein seq | MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVTIHLQALTSWSHRSLSTPISQCSFVFMKAPHF |
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| Function | WUSCHEL-related homeobox 6 [UniProtKB/Swiss-Prot:A2XG77] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0015680 | OsNaBo_03g0015680.02 | Chr03 | 12108761 | 12111674 | - | NAM | ||
| CDS seq | atggaggggagcagtaatagcccggataggcagtcgtcgggcggcagcccgccggaggagcgcggcggcgggggaagcggtggaggaggagggcggagcgccgccggcgagccggtgcggtcgcggtggacgcccaagccggagcagatactgatcctggagtccatcttcaacagcggcatggtcaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagaggttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcgcgccgccgccagcgccagatgcaggcggccgccgccgccgccgcagcggcggcctcttcctcttccccatccgccaacacctctcccgcagccgcgagcgccgccaccgtgcaggtgggcctcccgcccgtcgccgtcgtccacaccatggccatgggtgggagcgcgtgccagtacgagcagcaggcgagctcgtcgtcgtcgtccggcagcacgggaggttcgtcgctggggctgttcgcgcacggcgcgggggcctccggcgccggcgggtacctgcaggcgtcgtgcggcgcgtccgcgtcggcgtcgtcggcgctggcgcccgggctgatgggggatgtggtggacagcgggggaagcgacgatctcttcgccatctcgaggcagatggggtttgtggggagccctcgctgctcgccggccagctcgccggcgacgccgagctccgcggccaccgccgcgcagcagcagttctactcatgccaattacctgcagcgacgatcacggtgttcatcaacggagtcccaatggagatgccgaggggtccaatagacttgcgagccatgttcggccaggatgtgatgctcgtccactctactggggccctcctcccagtcaacgactatggaatcctaatgcagagcctccaaatcggagagagctactttctggtaaccatccatctccaagctcttactagctggtctcatcgctctctctctactccgatcagtcaatgcagtttcgtcttcatgaaagcaccacatttttag
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| Protein seq | MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVTIHLQALTSWSHRSLSTPISQCSFVFMKAPHF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0015680 | OsNaBo_03g0015680.01 | Chr03 | 12107970 | 12111893 | - | NAM | ||
| CDS seq | atggaggggagcagtaatagcccggataggcagtcgtcgggcggcagcccgccggaggagcgcggcggcgggggaagcggtggaggaggagggcggagcgccgccggcgagccggtgcggtcgcggtggacgcccaagccggagcagatactgatcctggagtccatcttcaacagcggcatggtcaacccgcccaaggacgagaccgtccgcatccgcaagctgctcgagaggttcggcgccgtcggcgacgccaacgtcttctactggttccagaaccgccgctcgcgctcgcgccgccgccagcgccagatgcaggcggccgccgccgccgccgcagcggcggcctcttcctcttccccatccgccaacacctctcccgcagccgcgagcgccgccaccgtgcaggtgggcctcccgcccgtcgccgtcgtccacaccatggccatgggtgggagcgcgtgccagtacgagcagcaggcgagctcgtcgtcgtcgtccggcagcacgggaggttcgtcgctggggctgttcgcgcacggcgcgggggcctccggcgccggcgggtacctgcaggcgtcgtgcggcgcgtccgcgtcggcgtcgtcggcgctggcgcccgggctgatgggggatgtggtggacagcgggggaagcgacgatctcttcgccatctcgaggcagatggggtttgtggggagccctcgctgctcgccggccagctcgccggcgacgccgagctccgcggccaccgccgcgcagcagcagttctactcatgccaattacctgcagcgacgatcacggtgttcatcaacggagtcccaatggagatgccgaggggtccaatagacttgcgagccatgttcggccaggatgtgatgctcgtccactctactggggccctcctcccagtcaacgactatggaatcctaatgcagagcctccaaatcggagagagctactttctggtcgctaggccaacttaa
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| Protein seq | MEGSSNSPDRQSSGGSPPEERGGGGSGGGGGRSAAGEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPVAVVHTMAMGGSACQYEQQASSSSSSGSTGGSSLGLFAHGAGASGAGGYLQASCGASASASSALAPGLMGDVVDSGGSDDLFAISRQMGFVGSPRCSPASSPATPSSAATAAQQQFYSCQLPAATITVFINGVPMEMPRGPIDLRAMFGQDVMLVHSTGALLPVNDYGILMQSLQIGESYFLVARPT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.055665 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0325600 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g20910 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0325600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016170 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016010 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016030 | RBH | 0.0 | 1.158161 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016020 | RBH | 0.0 | 0.030642 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0015830 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0197400 | RBH | 0.007297 | 2.4930205 | 0.8010475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0015710 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0201500 | RBH | 0.024327 | 6.5543875 | 0.566719 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0015970 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0015980 | RBH | 0.0 | 1.570190 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016010 | RBH | 0.0 | 6.413163 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0015890 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0015830 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G015780 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027610 | RBH | 0.0 | 0.0 | 0.0 |
