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© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved. National Key Laboratory of Crop Genetic Improvement Huazhong Agricultural University Any comments and suggestions, please contact us. |
Search Results: |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Loci | Gene Symbol(s) | Function | GO |
|---|---|---|---|---|---|---|
| OsMH63_07G0073900 | OGI:07013080 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:4385309-4386280 | ARF20, OsARF20 | Putative auxin response factor 20 [UniProtKB/Swiss-Prot: A3BH85]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_07G0074200 | OGI:07013080 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:4392720-4394796 | ARF20, OsARF20 | Putative auxin response factor 20 [UniProtKB/Swiss-Prot: A3BH85]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_07G0074400 | OGI:07013120 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:4398366-4401533 | - | B3 domain-containing protein Os07g0183300/Os07g0183600 [UniProtKB/Swiss-Prot: Q8H506]
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GO:0003677 (DNA binding)GO:0006355 (regulation of transcription, DNA-templated)GO:0009725 (response to hormone)GO:0005634 (nucleus)
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| OsMH63_07G0078800 | OGI:07013710 | 1/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:4621728-4623420 | - | Putative AC9 transposase [UniProtKB/Swiss-Prot: P03010]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_06G0058000 | OGI:06009790 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:3219983-3220537 | ERF7, OsERF#007, OsERF007, OsERF7, AP2/EREBP#142, AP2/EREBP142, DLN158, OsDLN158 | Ethylene-responsive transcription factor ERF008 [UniProtKB/Swiss-Prot: O22174]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_06G0065100 | OGI:06010920 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:3546563-3576161 | - | Transcription factor DIVARICATA [UniProtKB/Swiss-Prot: Q8S9H7]
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GO:0003677 (DNA binding)GO:0048262 (determination of dorsal/ventral asymmetry)GO:0009908 (flower development)GO:0005634 (nucleus)
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| OsMH63_06G0066100 | OGI:06011110 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:3643059-3645686 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_06G0083100 | OGI:06014010 | 13/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:4744227-4751695 | ERF16, OsERF#016, OsERF016, OsERF16, AP2/EREBP#055, AP2/EREBP55, ERF15, OsERF#015, OsERF015, OsERF15, AP2/EREBP#102, AP2/EREBP102, ERF14, OsERF#014, OsERF014, OsERF14, AP2/EREBP#103, AP2/EREBP103
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Ethylene-responsive transcription factor ERF017 [UniProtKB/Swiss-Prot: Q84QC2]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_06G0137000 | OGI:06023000 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:8023691-8025931 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_06G0165400 | OGI:06028590 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:9851357-9852880 | DOF20, OsDof20, Dof20, OsDof-20 | Dof zinc finger protein 4 [UniProtKB/Swiss-Prot: Q6Z345]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0184700 | OGI:06031750 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:10941511-10943691 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_02G0558200 | OGI:02083900 | 7/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:35469635-35472114 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_03G0008800 | OGI:03001480 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:565745-574059 | LF1, HOX10, Oshox10, OsHox10, OsHB1, HB1, OSHB1, LF1/OsHB1, OsLF1 | Homeobox-leucine zipper protein HOX10 [UniProtKB/Swiss-Prot: A2XBL9]
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GO:0003677 (DNA binding)GO:0008289 (lipid binding)GO:0005634 (nucleus)
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| OsMH63_03G0026400 | OGI:03004600 | 8/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:1726581-1731599 | PHR1, OsPHR1 | Putative Myb family transcription factor At1g14600 [UniProtKB/Swiss-Prot: Q700D9]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_03G0162500 | OGI:03025910 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:9791433-9799018 | OsbHLH078, - | Transcription factor bHLH110 [UniProtKB/Swiss-Prot: Q9SFZ3]
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GO:0003677 (DNA binding)GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_03G0505700 | OGI:03082840 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:32613329-32615797 | OsbHLH018 | Transcription factor bHLH25 [UniProtKB/Swiss-Prot: Q9T072]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_02G0461000 | OGI:02079950 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:29737865-29741532 | OsbHLH049 | Transcription factor bHLH96 [UniProtKB/Swiss-Prot: Q9C7T4]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_02G0526700 | OGI:02091020 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:33534021-33534749 | ERF103, DERF5, OsDERF5, OsERF#103, OsERF103, AP2/EREBP#130, AP2/EREBP130, OsERF109 | Ethylene-responsive transcription factor ERF112 [UniProtKB/Swiss-Prot: P93007]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0009873 (ethylene-activated signaling pathway)GO:0005634 (nucleus)
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| OsMH63_07G0040600 | OGI:07007050 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:2394586-2397782 | - | Dof zinc finger protein 2 [UniProtKB/Swiss-Prot: B9F1L8]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_07G0317000 | OGI:07054050 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:20217423-20221043 | GLW7, OsSPL13, SPL13 | Squamosa promoter-binding-like protein 13 [UniProtKB/Swiss-Prot: Q6Z461]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_07G0230800 | OGI:07038520 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:14080839-14085007 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_07G0284700 | OGI:07048240 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:18165194-18172160 | BHLH77, OsbHLH077, bHLH077, bHLH77, OsNRP1, NRP1, - | Transcription factor bHLH111 [UniProtKB/Swiss-Prot: Q9FYJ6]
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GO:0003677 (DNA binding)GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_07G0306500 | OGI:07052320 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:19515872-19519651 | - | Putative AC9 transposase [UniProtKB/Swiss-Prot: P03010]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_06G0322500 | OGI:06056880 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:21102829-21105866 | DLN168, OsDLN168 | Putative Myb family transcription factor At1g14600 [UniProtKB/Swiss-Prot: Q700D9]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0386000 | OGI:06069500 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:25360200-25366666 | OsbHLH095, bHLH095 | Transcription factor bHLH48 [UniProtKB/Swiss-Prot: Q8VZ02]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0162300 | OGI:06028130 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:9635768-9652171 | - | DNA topoisomerase 1 [UniProtKB/Swiss-Prot: Q4UM42]
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GO:0003677 (DNA binding)GO:0003917 (DNA topoisomerase type I (single strand cut, ATP-independent) activity)GO:0046872 (metal ion binding)GO:0006265 (DNA topological change)GO:0005694 (chromosome)
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| OsMH63_06G0169000 | OGI:06029300 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:10010816-10025096 | - | Sister chromatid cohesion protein PDS5 homolog B-B [UniProtKB/Swiss-Prot: Q5U241]
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GO:0003677 (DNA binding)GO:0051301 (cell division)GO:0007064 (mitotic sister chromatid cohesion)GO:0008285 (negative regulation of cell population proliferation)GO:0005634 (nucleus)
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| OsMH63_06G0408100 | OGI:06073530 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:26809664-26816636 | AP2/EREBP59, AP2/EREBP#059, AP2-4, OsSAE1 | APETALA2-like protein 4 [UniProtKB/Swiss-Prot: B8B0I8]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_06G0441400 | OGI:06079160 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:29044752-29051241 | ARF17, OsARF17 | Auxin response factor 17 [UniProtKB/Swiss-Prot: A2YG67]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0449600 | OGI:06080410 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:29501728-29505835 | ARF10, OsARF10, OsARF18, ARF18 | Auxin response factor 18 [UniProtKB/Swiss-Prot: Q653H7]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0466500 | OGI:06083190 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:30490420-30498675 | ARF7A, OsARF7a, OsARF19, ARF19, OsARF7 | Auxin response factor 19 [UniProtKB/Swiss-Prot: Q0D9R7]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0467100 | OGI:06083270 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:30535434-30541304 | SPL12, OsSPL12, DLN176, OsDLN176 | Squamosa promoter-binding-like protein 12 [UniProtKB/Swiss-Prot: A2YGR5]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0042025 (host cell nucleus)GO:0005634 (nucleus)
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| OsMH63_06G0487700 | OGI:06086910 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:31813265-31816085 | - | DNA-binding protein RHL1 [UniProtKB/Swiss-Prot: O81242]
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GO:0003677 (DNA binding)GO:0042023 (DNA endoreduplication)GO:0048766 (root hair initiation)GO:0005730 (nucleolus)
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| OsMH63_05G0002200 | OGI:05000430 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:191273-194938 | OsbHLH083 | Transcription factor bHLH137 [UniProtKB/Swiss-Prot: Q93W88]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0009739 (response to gibberellin)GO:0005634 (nucleus)
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| OsMH63_04G0444500 | OGI:04084260 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:30008381-30011123 | - | Protein RKD5 [UniProtKB/Swiss-Prot: O81791]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_04G0472000 | OGI:04088650 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:31752332-31755909 | OsbHLH050 | Transcription factor bHLH96 [UniProtKB/Swiss-Prot: Q9C7T4]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_04G0504500 | OGI:04094180 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:33869054-33872536 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_04G0540500 | OGI:04100510 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:36020114-36027882 | ARF8, OsARF8, OsARF12, ARF12 | Auxin response factor 12 [UniProtKB/Swiss-Prot: Q258Y5]
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GO:0003677 (DNA binding)GO:0009734 (auxin-activated signaling pathway)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_05G0292300 | OGI:05051530 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:20063565-20069723 | - | SNF2 domain-containing protein CLASSY 3 [UniProtKB/Swiss-Prot: F4I8S3]
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GO:0005524 (ATP binding)GO:0003677 (DNA binding)GO:0004386 (helicase activity)GO:1900370 (positive regulation of RNA interference)GO:0005634 (nucleus)
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| OsMH63_05G0295000 | OGI:05052010 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:20236789-20241333 | RR27, OsRR27, Rra16, OsPRR5, OsRRA16 | Two-component response regulator ORR27 [UniProtKB/Swiss-Prot: Q75HW2]
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GO:0003677 (DNA binding)GO:0009736 (cytokinin-activated signaling pathway)GO:0000160 (phosphorelay signal transduction system)GO:0005634 (nucleus)
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| OsMH63_05G0349900 | OGI:05061510 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:23720896-23721399 | - | Histone H2B.2 [UniProtKB/Swiss-Prot: P05621]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0006334 (nucleosome assembly)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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| OsMH63_05G0396200 | OGI:05069130 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:26713442-26715198 | NAC89, ONAC089, ONAC89 | NAC domain-containing protein 71 [UniProtKB/Swiss-Prot: Q53NF7]
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GO:0003677 (DNA binding)GO:1901002 (positive regulation of response to salt stress)GO:0045893 (positive regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_05G0450400 | OGI:05078080 | 11/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:29922221-29932048 | - | Protein RADIALIS-like 6 [UniProtKB/Swiss-Prot: Q1A173]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0006355 (regulation of transcription, DNA-templated)GO:0005634 (nucleus)
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| OsMH63_06G0062900 | OGI:06010590 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr06:3439655-3442103 | - | Putative AC transposase [UniProtKB/Swiss-Prot: P08770]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0006310 (DNA recombination)GO:0032196 (transposition)
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| OsMH63_04G0397000 | OGI:04076710 | 3/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:27048413-27050204 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_04G0439200 | OGI:04083360 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr04:29685861-29692105 | PL, PS, Pl, Pl1, Ra*, bhlh13, OsbHLH013, OsbHLH13, Ra, OSB1, Ra1, OsGL3A, GL3A, OsB2, OsMYC7, MYC7, OsPs, Ps, OsHLH1, HLH1
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Anthocyanin regulatory Lc protein [UniProtKB/Swiss-Prot: P13526]
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GO:0003677 (DNA binding)GO:0046983 (protein dimerization activity)GO:0005634 (nucleus)
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| OsMH63_05G0111800 | OGI:05019980 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr05:7461936-7463374 | - | Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot: Q6AVI0]
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GO:0003677 (DNA binding)GO:0046872 (metal ion binding)GO:0046983 (protein dimerization activity)GO:0009791 (post-embryonic development)GO:0005634 (nucleus)
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| OsMH63_01G0038200 | OGI:01007120 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:2265948-2268422 | AP2/EREBP129, AP2/EREBP#129, OsRAV2, RAV2, OsRAV9/OsTEM1, OsRAV9, OsTEM1, RAV9, TEM1 | AP2/ERF and B3 domain-containing protein Os01g0141000 [UniProtKB/Swiss-Prot: Q9AWS0]
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GO:0003677 (DNA binding)GO:0003700 (DNA-binding transcription factor activity)GO:0005634 (nucleus)
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| OsMH63_01G0039100 | OGI:01007340 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:2345557-2349282 | - | Transcription factor DIVARICATA [UniProtKB/Swiss-Prot: Q8S9H7]
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GO:0003677 (DNA binding)GO:0048262 (determination of dorsal/ventral asymmetry)GO:0009908 (flower development)GO:0005634 (nucleus)
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| OsMH63_01G0048400 | OGI:01008950 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr01:2866725-2867548 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59, H2B, - | Histone H2B.10 [UniProtKB/Swiss-Prot: A2WKS3]
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GO:0003677 (DNA binding)GO:0046982 (protein heterodimerization activity)GO:0000786 (nucleosome)GO:0005634 (nucleus)
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