Transcription factor GAMYB [UniProtKB/Swiss-Prot: A2WW87]

GO:0003677 (DNA binding)
GO:0048653 (anther development)
GO:0030154 (cell differentiation)
GO:0009555 (pollen development)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Transcription factor IBH1-like 1 [UniProtKB/Swiss-Prot: Q9M0B9]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0009742 (brassinosteroid mediated signaling pathway)
GO:0009740 (gibberellic acid mediated signaling pathway)
GO:0040008 (regulation of growth)
GO:0005634 (nucleus)

Protein G1-like2 [UniProtKB/Swiss-Prot: Q652I1]

GO:0003677 (DNA binding)
GO:0009299 (mRNA transcription)
GO:0007275 (multicellular organism development)
GO:0090698 (post-embryonic plant morphogenesis)
GO:0009416 (response to light stimulus)
GO:0005634 (nucleus)

Zinc finger CCCH domain-containing protein 45 [UniProtKB/Swiss-Prot: Q0DA50]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0003729 (mRNA binding)
GO:1990247 (N6-methyladenosine-containing RNA binding)
GO:0000398 (mRNA splicing, via spliceosome)
GO:0048024 (regulation of mRNA splicing, via spliceosome)
GO:0005654 (nucleoplasm)

Protein ULTRAPETALA 1 [UniProtKB/Swiss-Prot: Q8GZA8]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0007275 (multicellular organism development)
GO:0009910 (negative regulation of flower development)
GO:0009909 (regulation of flower development)
GO:1905435 (regulation of histone H3-K4 trimethylation)
GO:1901000 (regulation of response to salt stress)
GO:0005829 (cytosol)
GO:0005634 (nucleus)

Splicing factor U2af small subunit B [UniProtKB/Swiss-Prot: Q6AUG0]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0030628 (pre-mRNA 3'-splice site binding)
GO:0000398 (mRNA splicing, via spliceosome)
GO:0005681 (spliceosomal complex)
GO:0089701 (U2AF complex)

AP2-like ethylene-responsive transcription factor CRL5 [UniProtKB/Swiss-Prot: Q84Z02]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0048830 (adventitious root development)
GO:0080037 (negative regulation of cytokinin-activated signaling pathway)
GO:0005634 (nucleus)

Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 [UniProtKB/Swiss-Prot: Q10CH5]

GO:0003677 (DNA binding)
GO:0046983 (protein dimerization activity)
GO:0080006 (internode patterning)
GO:0090229 (negative regulation of red or far-red light signaling pathway)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Protein YABBY 1 [UniProtKB/Swiss-Prot: Q7XIM7]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0010158 (abaxial cell fate specification)
GO:0045165 (cell fate commitment)
GO:0048833 (specification of floral organ number)
GO:0005634 (nucleus)

NAC transcription factor 47 [UniProtKB/Swiss-Prot: Q84TD6]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009793 (embryo development ending in seed dormancy)
GO:0010365 (positive regulation of ethylene biosynthetic process)
GO:0009413 (response to flooding)
GO:0005634 (nucleus)

Probable histone H2A.6 [UniProtKB/Swiss-Prot: Q75L11]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006325 (chromatin organization)
GO:0006342 (chromatin silencing)
GO:0000790 (nuclear chromatin)
GO:0000786 (nucleosome)

DNA-directed RNA polymerase subunit beta'' [UniProtKB/Swiss-Prot: Q01923]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0008270 (zinc ion binding)
GO:0006351 (transcription, DNA-templated)
GO:0009507 (chloroplast)

Transcription factor GAMYB [UniProtKB/Swiss-Prot: A2WW87]

GO:0003677 (DNA binding)
GO:0048653 (anther development)
GO:0030154 (cell differentiation)
GO:0009555 (pollen development)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Zinc finger CCCH domain-containing protein 40 [UniProtKB/Swiss-Prot: Q5SNN4]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0036002 (pre-mRNA binding)
GO:0017070 (U6 snRNA binding)
GO:0000974 (Prp19 complex)
GO:0071006 (U2-type catalytic step 1 spliceosome)
GO:0071007 (U2-type catalytic step 2 spliceosome)

Zinc finger CCCH domain-containing protein 7 [UniProtKB/Swiss-Prot: Q657B3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046872 (metal ion binding)
GO:0045892 (negative regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Putative transcription factor bHLH041 [UniProtKB/Swiss-Prot: Q9LTS4]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Transcription factor HHO2 [UniProtKB/Swiss-Prot: Q8VZS3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0071456 (cellular response to hypoxia)
GO:0055062 (phosphate ion homeostasis)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0009737 (response to abscisic acid)
GO:0005634 (nucleus)

DNA (cytosine-5)-methyltransferase CMT2 [UniProtKB/Swiss-Prot: Q5KQL9]

GO:0003682 (chromatin binding)
GO:0003886 (DNA (cytosine-5-)-methyltransferase activity)
GO:0003677 (DNA binding)
GO:0010424 (DNA methylation on cytosine within a CG sequence)
GO:0010216 (maintenance of DNA methylation)
GO:0005634 (nucleus)

Probable histone H2A.6 [UniProtKB/Swiss-Prot: Q75L11]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006325 (chromatin organization)
GO:0006342 (chromatin silencing)
GO:0000790 (nuclear chromatin)
GO:0000786 (nucleosome)

FACT complex subunit SSRP1-B [UniProtKB/Swiss-Prot: Q65WY8]

GO:0003677 (DNA binding)
GO:0042393 (histone binding)
GO:0031491 (nucleosome binding)
GO:0006281 (DNA repair)
GO:0006260 (DNA replication)
GO:0035101 (FACT complex)
GO:0000790 (nuclear chromatin)

Transcription factor bHLH62 [UniProtKB/Swiss-Prot: Q9SRT2]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

DNA-directed RNA polymerase III subunit RPC4 [UniProtKB/Swiss-Prot: Q5E9Z7]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0051607 (defense response to virus)
GO:0045087 (innate immune response)
GO:0045089 (positive regulation of innate immune response)
GO:0032728 (positive regulation of interferon-beta production)
GO:0006383 (transcription by RNA polymerase III)
GO:0005666 (RNA polymerase III complex)

Ethylene-responsive transcription factor LEP [UniProtKB/Swiss-Prot: Q9M644]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0009740 (gibberellic acid mediated signaling pathway)
GO:0010030 (positive regulation of seed germination)
GO:0009739 (response to gibberellin)
GO:0005634 (nucleus)

Probable histone H2A.6 [UniProtKB/Swiss-Prot: Q75L11]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006325 (chromatin organization)
GO:0006342 (chromatin silencing)
GO:0000790 (nuclear chromatin)
GO:0000786 (nucleosome)

DNA-directed RNA polymerase III subunit RPC4 [UniProtKB/Swiss-Prot: Q5E9Z7]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0051607 (defense response to virus)
GO:0045087 (innate immune response)
GO:0045089 (positive regulation of innate immune response)
GO:0032728 (positive regulation of interferon-beta production)
GO:0006383 (transcription by RNA polymerase III)
GO:0005666 (RNA polymerase III complex)

DNA-directed RNA polymerase III subunit RPC4 [UniProtKB/Swiss-Prot: Q5E9Z7]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0051607 (defense response to virus)
GO:0045087 (innate immune response)
GO:0045089 (positive regulation of innate immune response)
GO:0032728 (positive regulation of interferon-beta production)
GO:0006383 (transcription by RNA polymerase III)
GO:0005666 (RNA polymerase III complex)

DNA-directed RNA polymerase III subunit RPC4 [UniProtKB/Swiss-Prot: Q5E9Z7]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0051607 (defense response to virus)
GO:0045087 (innate immune response)
GO:0045089 (positive regulation of innate immune response)
GO:0032728 (positive regulation of interferon-beta production)
GO:0006383 (transcription by RNA polymerase III)
GO:0005666 (RNA polymerase III complex)

DNA-directed RNA polymerase III subunit RPC4 [UniProtKB/Swiss-Prot: Q5E9Z7]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0051607 (defense response to virus)
GO:0045087 (innate immune response)
GO:0045089 (positive regulation of innate immune response)
GO:0032728 (positive regulation of interferon-beta production)
GO:0006383 (transcription by RNA polymerase III)
GO:0005666 (RNA polymerase III complex)

DNA-directed RNA polymerase subunit beta'' [UniProtKB/Swiss-Prot: P0C508]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0008270 (zinc ion binding)
GO:0006351 (transcription, DNA-templated)
GO:0009507 (chloroplast)
GO:0009536 (plastid)

ATP-dependent DNA helicase MER3 homolog [UniProtKB/Swiss-Prot: B6DMK2]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0003678 (DNA helicase activity)
GO:0007131 (reciprocal meiotic recombination)
GO:0000712 (resolution of meiotic recombination intermediates)
GO:0005694 (chromosome)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor ERF054 [UniProtKB/Swiss-Prot: Q9M0J3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

ATP-dependent DNA helicase PIF1 [UniProtKB/Swiss-Prot: Q0R4F1]

GO:0043139 (5'-3' DNA helicase activity)
GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0006310 (DNA recombination)
GO:0006281 (DNA repair)
GO:0000002 (mitochondrial genome maintenance)
GO:0000723 (telomere maintenance)
GO:0005739 (mitochondrion)
GO:0005634 (nucleus)

Transcription factor bHLH74 [UniProtKB/Swiss-Prot: Q6NKN9]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0040008 (regulation of growth)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0009637 (response to blue light)
GO:0005634 (nucleus)

Replication factor C subunit 5 [UniProtKB/Swiss-Prot: Q852K3]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0006281 (DNA repair)
GO:0006261 (DNA-dependent DNA replication)
GO:0005663 (DNA replication factor C complex)
GO:0005634 (nucleus)

DNA-directed RNA polymerase III subunit 2 [UniProtKB/Swiss-Prot: F4KD38]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0046872 (metal ion binding)
GO:0032549 (ribonucleoside binding)
GO:0009561 (megagametogenesis)
GO:0006351 (transcription, DNA-templated)
GO:0005666 (RNA polymerase III complex)

NAC transcription factor 47 [UniProtKB/Swiss-Prot: Q84TD6]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009793 (embryo development ending in seed dormancy)
GO:0010365 (positive regulation of ethylene biosynthetic process)
GO:0009413 (response to flooding)
GO:0005634 (nucleus)

Dof zinc finger protein MNB1A [UniProtKB/Swiss-Prot: P38564]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0000976 (transcription regulatory region sequence-specific DNA binding)
GO:0008270 (zinc ion binding)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

ATP-dependent DNA helicase PIF1 [UniProtKB/Swiss-Prot: Q0R4F1]

GO:0043139 (5'-3' DNA helicase activity)
GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0006310 (DNA recombination)
GO:0006281 (DNA repair)
GO:0000002 (mitochondrial genome maintenance)
GO:0000723 (telomere maintenance)
GO:0005739 (mitochondrion)
GO:0005634 (nucleus)

Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 [UniProtKB/Swiss-Prot: Q10CH5]

GO:0003677 (DNA binding)
GO:0046983 (protein dimerization activity)
GO:0080006 (internode patterning)
GO:0090229 (negative regulation of red or far-red light signaling pathway)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

KH domain-containing protein SPIN1 [UniProtKB/Swiss-Prot: Q75GR5]

GO:0003677 (DNA binding)
GO:0003729 (mRNA binding)
GO:0003723 (RNA binding)
GO:0009908 (flower development)
GO:0048579 (negative regulation of long-day photoperiodism, flowering)
GO:0048577 (negative regulation of short-day photoperiodism, flowering)
GO:0000381 (regulation of alternative mRNA splicing, via spliceosome)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor CRF4 [UniProtKB/Swiss-Prot: Q9SUE3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009736 (cytokinin-activated signaling pathway)
GO:0009873 (ethylene-activated signaling pathway)
GO:0048366 (leaf development)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

APETALA2-like protein 2 [UniProtKB/Swiss-Prot: B8AMA9]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009909 (regulation of flower development)
GO:0080050 (regulation of seed development)
GO:0010228 (vegetative to reproductive phase transition of meristem)
GO:0005634 (nucleus)

Zinc finger CCCH domain-containing protein 25 [UniProtKB/Swiss-Prot: Q10B98]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0003723 (RNA binding)
GO:0000398 (mRNA splicing, via spliceosome)
GO:0071011 (precatalytic spliceosome)
GO:0005686 (U2 snRNP)

Single-stranded DNA-binding protein WHY2, mitochondrial [UniProtKB/Swiss-Prot: D9J034]

GO:0003677 (DNA binding)
GO:0003697 (single-stranded DNA binding)
GO:0006952 (defense response)
GO:0006281 (DNA repair)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005739 (mitochondrion)

BLS1, OsBLS1, OsG1L6, G1L6, TH1, OsTH1, TH1/BSG1/BLS1/AFD1, BSG1, OsBSG1, AFD1, OsAFD1, BH1, OsBH1

Protein G1-like6 [UniProtKB/Swiss-Prot: Q6K5X1]

GO:0003677 (DNA binding)
GO:0009299 (mRNA transcription)
GO:0007275 (multicellular organism development)
GO:0090698 (post-embryonic plant morphogenesis)
GO:0009416 (response to light stimulus)
GO:0005634 (nucleus)

NAC domain-containing protein 78 [UniProtKB/Swiss-Prot: Q84K00]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:0009962 (regulation of flavonoid biosynthetic process)
GO:0009644 (response to high light intensity)
GO:0005737 (cytoplasm)
GO:0016021 (integral component of membrane)
GO:0005634 (nucleus)

Cyanate hydratase [UniProtKB/Swiss-Prot: Q9FWK4]

GO:0008824 (cyanate hydratase activity)
GO:0003677 (DNA binding)
GO:0042802 (identical protein binding)
GO:0009440 (cyanate catabolic process)
GO:0009651 (response to salt stress)
GO:0005829 (cytosol)

Protein G1-like5 [UniProtKB/Swiss-Prot: Q7XDD0]

GO:0003677 (DNA binding)
GO:0009299 (mRNA transcription)
GO:0007275 (multicellular organism development)
GO:0090698 (post-embryonic plant morphogenesis)
GO:0009416 (response to light stimulus)
GO:0005634 (nucleus)

ERF18, OsERF#018, OsERF018, OsERF18, AP2/EREBP#115, AP2/EREBP115, ERF36, OsERF#036, OsERF036, OsERF36, AP2/EREBP#007, AP2/EREBP7

Ethylene-responsive transcription factor ERF024 [UniProtKB/Swiss-Prot: Q9SJR0]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0050832 (defense response to fungus)
GO:0009873 (ethylene-activated signaling pathway)
GO:0005634 (nucleus)

Transcription factor MYBS2 [UniProtKB/Swiss-Prot: Q7XC51]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:0009739 (response to gibberellin)
GO:0009744 (response to sucrose)
GO:0005634 (nucleus)