Protein STICHEL-like 2 [UniProtKB/Swiss-Prot: F4JRP8]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0003887 (DNA-directed DNA polymerase activity)
GO:0006281 (DNA repair)
GO:0006261 (DNA-dependent DNA replication)
GO:0009360 (DNA polymerase III complex)
GO:0005663 (DNA replication factor C complex)
GO:0005634 (nucleus)

NAC domain-containing protein 76 [UniProtKB/Swiss-Prot: Q5Z6B6]

GO:0003677 (DNA binding)
GO:0009834 (plant-type secondary cell wall biogenesis)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0048829 (root cap development)
GO:0005634 (nucleus)

Putative transcription factor bHLH041 [UniProtKB/Swiss-Prot: Q9LTS4]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Zinc finger CCCH domain-containing protein 44 [UniProtKB/Swiss-Prot: Q69XQ3]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0003729 (mRNA binding)
GO:0010468 (regulation of gene expression)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

NAM, OsNAM, OMTN5, ONAC092, ONAC92, NAC92, CUC2, OsNAM/CUC2, DLN165, OsDLN165, OsCUC1, CUC1, OsNAM/ OMTN5

Protein CUP-SHAPED COTYLEDON 2 [UniProtKB/Swiss-Prot: O04017]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0090691 (formation of plant organ boundary)
GO:0048366 (leaf development)
GO:0010072 (primary shoot apical meristem specification)
GO:0090709 (regulation of timing of plant organ formation)
GO:0010223 (secondary shoot formation)
GO:0005634 (nucleus)

Protein G1 [UniProtKB/Swiss-Prot: Q8GVZ6]

GO:0003677 (DNA binding)
GO:0048449 (floral organ formation)
GO:0009299 (mRNA transcription)
GO:0090698 (post-embryonic plant morphogenesis)
GO:0009909 (regulation of flower development)
GO:0009416 (response to light stimulus)
GO:0005634 (nucleus)

DNA-directed RNA polymerases II, IV and V subunit 11 [UniProtKB/Swiss-Prot: Q38859]

GO:0003677 (DNA binding)
GO:0046983 (protein dimerization activity)
GO:0001055 (RNA polymerase II activity)
GO:0005665 (RNA polymerase II, core complex)
GO:0000418 (RNA polymerase IV complex)
GO:0000419 (RNA polymerase V complex)

NAC transcription factor 47 [UniProtKB/Swiss-Prot: Q84TD6]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009793 (embryo development ending in seed dormancy)
GO:0010365 (positive regulation of ethylene biosynthetic process)
GO:0009413 (response to flooding)
GO:0005634 (nucleus)

Protein BZR1 homolog 1 [UniProtKB/Swiss-Prot: Q7XI96]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009742 (brassinosteroid mediated signaling pathway)
GO:0040008 (regulation of growth)
GO:0009741 (response to brassinosteroid)
GO:0006351 (transcription, DNA-templated)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor CRF4 [UniProtKB/Swiss-Prot: Q9SUE3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009736 (cytokinin-activated signaling pathway)
GO:0009873 (ethylene-activated signaling pathway)
GO:0048366 (leaf development)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

Protein ETHYLENE-INSENSITIVE 3-like 1b [UniProtKB/Swiss-Prot: Q8W3M0]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0043565 (sequence-specific DNA binding)
GO:0009873 (ethylene-activated signaling pathway)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:0010104 (regulation of ethylene-activated signaling pathway)
GO:1903034 (regulation of response to wounding)
GO:0005634 (nucleus)

Transcription factor bHLH78 [UniProtKB/Swiss-Prot: Q9FJL4]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0009637 (response to blue light)
GO:0005634 (nucleus)

Transcription factor HY5 [UniProtKB/Swiss-Prot: Q9SM50]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0010017 (red or far-red light signaling pathway)
GO:0009585 (red, far-red light phototransduction)
GO:0010099 (regulation of photomorphogenesis)
GO:0010218 (response to far red light)
GO:0010114 (response to red light)
GO:0005634 (nucleus)

Dof zinc finger protein DOF3.1 [UniProtKB/Swiss-Prot: Q94AR6]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046872 (metal ion binding)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Protein ALWAYS EARLY 2 [UniProtKB/Swiss-Prot: Q6A333]

GO:0003677 (DNA binding)
GO:0051726 (regulation of cell cycle)
GO:0006357 (regulation of transcription by RNA polymerase II)
GO:0000003 (reproduction)
GO:0006351 (transcription, DNA-templated)
GO:0005654 (nucleoplasm)
GO:0017053 (transcription repressor complex)

Putative transcription factor bHLH041 [UniProtKB/Swiss-Prot: Q9LTS4]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Transcription factor bHLH68 [UniProtKB/Swiss-Prot: Q8S3D1]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

DNA excision repair protein CSB [UniProtKB/Swiss-Prot: Q7F2E4]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0008094 (DNA-dependent ATPase activity)
GO:0004386 (helicase activity)
GO:0006283 (transcription-coupled nucleotide-excision repair)
GO:0005634 (nucleus)

Transcription factor RHD6 [UniProtKB/Swiss-Prot: Q9C707]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0048766 (root hair initiation)
GO:0005739 (mitochondrion)
GO:0005634 (nucleus)

Cyclic dof factor 2 [UniProtKB/Swiss-Prot: Q93ZL5]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046872 (metal ion binding)
GO:0009908 (flower development)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor ERF071 [UniProtKB/Swiss-Prot: O22259]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0071456 (cellular response to hypoxia)
GO:0009873 (ethylene-activated signaling pathway)
GO:2000280 (regulation of root development)
GO:0034059 (response to anoxia)
GO:0005634 (nucleus)

DNA-directed RNA polymerases II and IV subunit 5A [UniProtKB/Swiss-Prot: O81098]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0006351 (transcription, DNA-templated)
GO:0042025 (host cell nucleus)
GO:0005736 (RNA polymerase I complex)
GO:0005665 (RNA polymerase II, core complex)
GO:0005666 (RNA polymerase III complex)
GO:0000418 (RNA polymerase IV complex)

Transcription factor bHLH153 [UniProtKB/Swiss-Prot: Q7XJU2]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0005634 (nucleus)

Septin and tuftelin-interacting protein 1 homolog 1 [UniProtKB/Swiss-Prot: Q9SHG6]

GO:0003677 (DNA binding)
GO:1990446 (U1 snRNP binding)
GO:0000398 (mRNA splicing, via spliceosome)
GO:0042752 (regulation of circadian rhythm)
GO:0000390 (spliceosomal complex disassembly)
GO:0031981 (nuclear lumen)
GO:0071008 (U2-type post-mRNA release spliceosomal complex)

Ethylene-responsive transcription factor ERF054 [UniProtKB/Swiss-Prot: Q9M0J3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor 5 [UniProtKB/Swiss-Prot: O80341]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0006952 (defense response)
GO:0009873 (ethylene-activated signaling pathway)
GO:0010200 (response to chitin)
GO:0009409 (response to cold)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor ERF038 [UniProtKB/Swiss-Prot: Q9ZQP3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0009834 (plant-type secondary cell wall biogenesis)
GO:0005634 (nucleus)

Transcription factor GAMYB [UniProtKB/Swiss-Prot: A2WW87]

GO:0003677 (DNA binding)
GO:0048653 (anther development)
GO:0030154 (cell differentiation)
GO:0009555 (pollen development)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Two-component response regulator ORR26 [UniProtKB/Swiss-Prot: Q5N6V8]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009736 (cytokinin-activated signaling pathway)
GO:0000160 (phosphorelay signal transduction system)
GO:0005634 (nucleus)

B3 domain-containing protein VP1 [UniProtKB/Swiss-Prot: P37398]

GO:0003677 (DNA binding)
GO:0009738 (abscisic acid-activated signaling pathway)
GO:0007275 (multicellular organism development)
GO:0009737 (response to abscisic acid)
GO:0005634 (nucleus)

Transcription factor ILR3 [UniProtKB/Swiss-Prot: Q9FH37]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0019760 (glucosinolate metabolic process)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Transcription factor MAMYB [UniProtKB/Swiss-Prot: Q9ASQ2]

GO:0003677 (DNA binding)
GO:0048767 (root hair elongation)
GO:0005783 (endoplasmic reticulum)
GO:0005789 (endoplasmic reticulum membrane)
GO:0016021 (integral component of membrane)
GO:0005634 (nucleus)
GO:0005886 (plasma membrane)

Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [UniProtKB/Swiss-Prot: Q9LMK2]

GO:0003677 (DNA binding)
GO:0009299 (mRNA transcription)
GO:0007275 (multicellular organism development)
GO:0090698 (post-embryonic plant morphogenesis)
GO:0009416 (response to light stimulus)
GO:0005634 (nucleus)

Histone H4 [UniProtKB/Swiss-Prot: P0CG89]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006334 (nucleosome assembly)
GO:0042025 (host cell nucleus)
GO:0000786 (nucleosome)
GO:0005634 (nucleus)

Protein BZR1 homolog 1 [UniProtKB/Swiss-Prot: Q7XI96]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009742 (brassinosteroid mediated signaling pathway)
GO:0040008 (regulation of growth)
GO:0009741 (response to brassinosteroid)
GO:0006351 (transcription, DNA-templated)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

Transcription factor HEC2 [UniProtKB/Swiss-Prot: Q9SND4]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0048462 (carpel formation)
GO:0048467 (gynoecium development)
GO:0080126 (ovary septum development)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0010500 (transmitting tissue development)
GO:0005634 (nucleus)

Transcription factor bHLH49 [UniProtKB/Swiss-Prot: Q9CAA9]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0040008 (regulation of growth)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Genome polyprotein [UniProtKB/Swiss-Prot: Q6XKE6]

GO:0004190 (aspartic-type endopeptidase activity)
GO:0003677 (DNA binding)
GO:0003887 (DNA-directed DNA polymerase activity)
GO:0004519 (endonuclease activity)
GO:0003964 (RNA-directed DNA polymerase activity)
GO:0008270 (zinc ion binding)
GO:0046740 (transport of virus in host, cell to cell)

Transcription factor bHLH130 [UniProtKB/Swiss-Prot: Q66GR3]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0048573 (photoperiodism, flowering)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Luc7-like protein 3 [UniProtKB/Swiss-Prot: Q5R8W6]

GO:0003677 (DNA binding)
GO:0003729 (mRNA binding)
GO:0006376 (mRNA splice site selection)
GO:0008380 (RNA splicing)
GO:0016607 (nuclear speck)
GO:0005634 (nucleus)
GO:0005685 (U1 snRNP)

Multiprotein-bridging factor 1a [UniProtKB/Swiss-Prot: Q9SJI8]

GO:0003677 (DNA binding)
GO:0003729 (mRNA binding)
GO:0003713 (transcription coactivator activity)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:0005829 (cytosol)
GO:0005730 (nucleolus)
GO:0005634 (nucleus)

Putative ETHYLENE INSENSITIVE 3-like 4 protein [UniProtKB/Swiss-Prot: Q9LX16]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0080167 (response to karrikin)
GO:0005634 (nucleus)

SNB, AP2/EREBP#073, AP2/EREBP73, AP2-3, SSH1, OsSSH1, OsSNB, DLN181, DLN181a, DLN181b, OsDLN181, OsDLN181a, OsDLN181b, SUI4, OsSUI4, SUI4/SNB

APETALA2-like protein 3 [UniProtKB/Swiss-Prot: B8B8J2]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009909 (regulation of flower development)
GO:0010228 (vegetative to reproductive phase transition of meristem)
GO:0005634 (nucleus)

DNA-directed RNA polymerase II subunit RPB1 [UniProtKB/Swiss-Prot: P14248]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0046872 (metal ion binding)
GO:0006366 (transcription by RNA polymerase II)
GO:0005634 (nucleus)

Probable histone H2A.6 [UniProtKB/Swiss-Prot: Q75L11]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006325 (chromatin organization)
GO:0006342 (chromatin silencing)
GO:0000790 (nuclear chromatin)
GO:0000786 (nucleosome)

Transcription factor RHD6 [UniProtKB/Swiss-Prot: Q9C707]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0048766 (root hair initiation)
GO:0005739 (mitochondrion)
GO:0005634 (nucleus)

Replication factor C subunit 3 [UniProtKB/Swiss-Prot: Q6YZ54]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0006281 (DNA repair)
GO:0006261 (DNA-dependent DNA replication)
GO:0031348 (negative regulation of defense response)
GO:0005663 (DNA replication factor C complex)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor ERF020 [UniProtKB/Swiss-Prot: Q9C9I8]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Transcription factor ILR3 [UniProtKB/Swiss-Prot: Q9FH37]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0019760 (glucosinolate metabolic process)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

KH domain-containing protein SPIN1 [UniProtKB/Swiss-Prot: Q75GR5]

GO:0003677 (DNA binding)
GO:0003729 (mRNA binding)
GO:0003723 (RNA binding)
GO:0009908 (flower development)
GO:0048579 (negative regulation of long-day photoperiodism, flowering)
GO:0048577 (negative regulation of short-day photoperiodism, flowering)
GO:0000381 (regulation of alternative mRNA splicing, via spliceosome)
GO:0005634 (nucleus)