DNA-directed RNA polymerase III subunit 1 [UniProtKB/Swiss-Prot: F4JXF9]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0046872 (metal ion binding)
GO:0006351 (transcription, DNA-templated)
GO:0005666 (RNA polymerase III complex)

Transcription factor LAX PANICLE 1 [UniProtKB/Swiss-Prot: Q7XAQ6]

GO:0003677 (DNA binding)
GO:0046983 (protein dimerization activity)
GO:0007275 (multicellular organism development)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:2000032 (regulation of secondary shoot formation)
GO:0005634 (nucleus)

Histone H4 [UniProtKB/Swiss-Prot: P0CG89]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006334 (nucleosome assembly)
GO:0042025 (host cell nucleus)
GO:0000786 (nucleosome)
GO:0005634 (nucleus)

Transcription initiation factor TFIID subunit 12 [UniProtKB/Swiss-Prot: Q9SR71]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0017025 (TBP-class protein binding)
GO:0051123 (RNA polymerase II preinitiation complex assembly)
GO:0000124 (SAGA complex)
GO:0046695 (SLIK (SAGA-like) complex)
GO:0005669 (transcription factor TFIID complex)

FACT complex subunit SSRP1-A [UniProtKB/Swiss-Prot: Q9LGR0]

GO:0003677 (DNA binding)
GO:0042393 (histone binding)
GO:0031491 (nucleosome binding)
GO:0006281 (DNA repair)
GO:0006260 (DNA replication)
GO:0035101 (FACT complex)
GO:0000790 (nuclear chromatin)

AT-hook motif nuclear-localized protein 21 [UniProtKB/Swiss-Prot: O82166]

GO:0003680 (minor groove of adenine-thymine-rich DNA binding)
GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0048653 (anther development)
GO:0048440 (carpel development)
GO:0045892 (negative regulation of transcription, DNA-templated)
GO:0005654 (nucleoplasm)
GO:0005634 (nucleus)

Probable histone H2A.5 [UniProtKB/Swiss-Prot: Q94E96]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006325 (chromatin organization)
GO:0006342 (chromatin silencing)
GO:0000790 (nuclear chromatin)
GO:0000786 (nucleosome)

DNA repair protein RAD51 homolog 3 [UniProtKB/Swiss-Prot: Q8GXF0]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0008094 (DNA-dependent ATPase activity)
GO:0006281 (DNA repair)
GO:0007131 (reciprocal meiotic recombination)
GO:0033063 (Rad51B-Rad51C-Rad51D-XRCC2 complex)
GO:0033065 (Rad51C-XRCC3 complex)
GO:0005657 (replication fork)

ATP-dependent DNA helicase pif1 [UniProtKB/Swiss-Prot: A5WFR0]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0003678 (DNA helicase activity)
GO:0006310 (DNA recombination)
GO:0006281 (DNA repair)
GO:0000723 (telomere maintenance)

Zinc finger BED domain-containing protein DAYSLEEPER [UniProtKB/Swiss-Prot: Q9M2N5]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0046983 (protein dimerization activity)
GO:0009791 (post-embryonic development)
GO:0005829 (cytosol)
GO:0005634 (nucleus)

Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [UniProtKB/Swiss-Prot: Q9FGH2]

GO:0003677 (DNA binding)
GO:0009299 (mRNA transcription)
GO:0007275 (multicellular organism development)
GO:0090698 (post-embryonic plant morphogenesis)
GO:0009416 (response to light stimulus)
GO:0005634 (nucleus)

DNA excision repair protein CSB [UniProtKB/Swiss-Prot: Q7F2E4]

GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0008094 (DNA-dependent ATPase activity)
GO:0004386 (helicase activity)
GO:0006283 (transcription-coupled nucleotide-excision repair)
GO:0005634 (nucleus)

DNA-directed RNA polymerases I, II, and III subunit RPABC5 [UniProtKB/Swiss-Prot: Q39290]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0008270 (zinc ion binding)
GO:0006351 (transcription, DNA-templated)
GO:0005634 (nucleus)

Zinc finger CCCH domain-containing protein 19 [UniProtKB/Swiss-Prot: Q9SIV5]

GO:0003677 (DNA binding)
GO:0042393 (histone binding)
GO:0046872 (metal ion binding)
GO:0032776 (DNA methylation on cytosine)
GO:0031047 (gene silencing by RNA)
GO:0010964 (regulation of heterochromatin assembly by small RNA)
GO:0005829 (cytosol)
GO:0005634 (nucleus)

Protein FEZ [UniProtKB/Swiss-Prot: Q9ZVH0]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0045770 (positive regulation of asymmetric cell division)
GO:0009733 (response to auxin)
GO:0048829 (root cap development)
GO:0048103 (somatic stem cell division)
GO:0005634 (nucleus)

ETHYLENE INSENSITIVE 3-like 3 protein [UniProtKB/Swiss-Prot: O23116]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009873 (ethylene-activated signaling pathway)
GO:0042762 (regulation of sulfur metabolic process)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Zinc finger protein CO3 [UniProtKB/Swiss-Prot: O82117]

GO:0003677 (DNA binding)
GO:0008270 (zinc ion binding)
GO:0009908 (flower development)
GO:0048577 (negative regulation of short-day photoperiodism, flowering)
GO:0009909 (regulation of flower development)
GO:0005634 (nucleus)

Transcription factor bHLH52 [UniProtKB/Swiss-Prot: Q9SA82]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor 9 [UniProtKB/Swiss-Prot: Q9FE67]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0006952 (defense response)
GO:0009873 (ethylene-activated signaling pathway)
GO:0019760 (glucosinolate metabolic process)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor 9 [UniProtKB/Swiss-Prot: Q9FE67]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0006952 (defense response)
GO:0009873 (ethylene-activated signaling pathway)
GO:0019760 (glucosinolate metabolic process)
GO:0005634 (nucleus)

Putative transcription factor bHLH107 [UniProtKB/Swiss-Prot: Q9LET0]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Dof zinc finger protein MNB1A [UniProtKB/Swiss-Prot: P38564]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0000976 (transcription regulatory region sequence-specific DNA binding)
GO:0008270 (zinc ion binding)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

Methyl-CpG-binding domain-containing protein 2 [UniProtKB/Swiss-Prot: Q8LA53]

GO:0003677 (DNA binding)
GO:0019899 (enzyme binding)
GO:0008270 (zinc ion binding)
GO:0080111 (DNA demethylation)
GO:0042025 (host cell nucleus)
GO:0005634 (nucleus)

bZIP transcription factor 27 [UniProtKB/Swiss-Prot: Q7PCC6]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0043621 (protein self-association)
GO:0045893 (positive regulation of transcription, DNA-templated)
GO:2000028 (regulation of photoperiodism, flowering)
GO:0010200 (response to chitin)
GO:0005634 (nucleus)

Protein SUPPRESSOR OF FRI 4 [UniProtKB/Swiss-Prot: Q9C5G0]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046872 (metal ion binding)
GO:0030154 (cell differentiation)
GO:0009908 (flower development)
GO:0009910 (negative regulation of flower development)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

DNA (cytosine-5)-methyltransferase CMT3 [UniProtKB/Swiss-Prot: C0SQ89]

GO:0003682 (chromatin binding)
GO:0003886 (DNA (cytosine-5-)-methyltransferase activity)
GO:0003677 (DNA binding)
GO:0032776 (DNA methylation on cytosine)
GO:0010424 (DNA methylation on cytosine within a CG sequence)
GO:0010216 (maintenance of DNA methylation)
GO:0005634 (nucleus)

ATP-dependent DNA helicase PIF1 [UniProtKB/Swiss-Prot: Q0R4F1]

GO:0043139 (5'-3' DNA helicase activity)
GO:0005524 (ATP binding)
GO:0003677 (DNA binding)
GO:0006310 (DNA recombination)
GO:0006281 (DNA repair)
GO:0000002 (mitochondrial genome maintenance)
GO:0000723 (telomere maintenance)
GO:0005739 (mitochondrion)
GO:0005634 (nucleus)

AT-hook motif nuclear-localized protein 21 [UniProtKB/Swiss-Prot: O82166]

GO:0003680 (minor groove of adenine-thymine-rich DNA binding)
GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0048653 (anther development)
GO:0048440 (carpel development)
GO:0045892 (negative regulation of transcription, DNA-templated)
GO:0005654 (nucleoplasm)
GO:0005634 (nucleus)

AP2-like ethylene-responsive transcription factor CRL5 [UniProtKB/Swiss-Prot: Q84Z02]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0048830 (adventitious root development)
GO:0080037 (negative regulation of cytokinin-activated signaling pathway)
GO:0005634 (nucleus)

DNA polymerase I A, chloroplastic [UniProtKB/Swiss-Prot: Q6Z4T5]

GO:0008408 (3'-5' exonuclease activity)
GO:0008409 (5'-3' exonuclease activity)
GO:0003677 (DNA binding)
GO:0003887 (DNA-directed DNA polymerase activity)
GO:0006281 (DNA repair)
GO:0006261 (DNA-dependent DNA replication)
GO:0009507 (chloroplast)
GO:0005737 (cytoplasm)

Chromatin modification-related protein EAF1 A [UniProtKB/Swiss-Prot: F4J7T3]

GO:0003677 (DNA binding)
GO:0043981 (histone H4-K5 acetylation)
GO:0009909 (regulation of flower development)
GO:0048510 (regulation of timing of transition from vegetative to reproductive phase)
GO:0035267 (NuA4 histone acetyltransferase complex)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor CRF3 [UniProtKB/Swiss-Prot: Q9FK12]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0048825 (cotyledon development)
GO:0009736 (cytokinin-activated signaling pathway)
GO:0009873 (ethylene-activated signaling pathway)
GO:0048366 (leaf development)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

Zinc finger CCCH domain-containing protein 19 [UniProtKB/Swiss-Prot: Q9SIV5]

GO:0003677 (DNA binding)
GO:0042393 (histone binding)
GO:0046872 (metal ion binding)
GO:0032776 (DNA methylation on cytosine)
GO:0031047 (gene silencing by RNA)
GO:0010964 (regulation of heterochromatin assembly by small RNA)
GO:0005829 (cytosol)
GO:0005634 (nucleus)

Histone H4 [UniProtKB/Swiss-Prot: P0CG89]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006334 (nucleosome assembly)
GO:0042025 (host cell nucleus)
GO:0000786 (nucleosome)
GO:0005634 (nucleus)

Histone H4 [UniProtKB/Swiss-Prot: P0CG89]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006334 (nucleosome assembly)
GO:0042025 (host cell nucleus)
GO:0000786 (nucleosome)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor CRF4 [UniProtKB/Swiss-Prot: Q9SUE3]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009736 (cytokinin-activated signaling pathway)
GO:0009873 (ethylene-activated signaling pathway)
GO:0048366 (leaf development)
GO:0005737 (cytoplasm)
GO:0005634 (nucleus)

Replication termination factor 2 [UniProtKB/Swiss-Prot: A5GFW7]

GO:0003677 (DNA binding)
GO:0072711 (cellular response to hydroxyurea)
GO:1902979 (mitotic DNA replication termination)
GO:0097752 (regulation of DNA stability)
GO:0071171 (site-specific DNA replication termination at RTS1 barrier)
GO:0005634 (nucleus)
GO:0005657 (replication fork)

Probable histone H2A.6 [UniProtKB/Swiss-Prot: Q75L11]

GO:0003677 (DNA binding)
GO:0046982 (protein heterodimerization activity)
GO:0006325 (chromatin organization)
GO:0006342 (chromatin silencing)
GO:0000790 (nuclear chromatin)
GO:0000786 (nucleosome)

DNA polymerase epsilon subunit B [UniProtKB/Swiss-Prot: Q500V9]

GO:0003677 (DNA binding)
GO:0070182 (DNA polymerase binding)
GO:0007049 (cell cycle)
GO:0006261 (DNA-dependent DNA replication)
GO:0009793 (embryo development ending in seed dormancy)
GO:0042276 (error-prone translesion synthesis)
GO:0051781 (positive regulation of cell division)
GO:0008622 (epsilon DNA polymerase complex)

Transcription factor bHLH68 [UniProtKB/Swiss-Prot: Q8S3D1]

GO:0003677 (DNA binding)
GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0006355 (regulation of transcription, DNA-templated)
GO:0005634 (nucleus)

DNA-directed RNA polymerase subunit beta [UniProtKB/Swiss-Prot: P0C503]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0032549 (ribonucleoside binding)
GO:0006351 (transcription, DNA-templated)
GO:0009507 (chloroplast)
GO:0009536 (plastid)

DNA-directed RNA polymerase subunit beta [UniProtKB/Swiss-Prot: P0C503]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0032549 (ribonucleoside binding)
GO:0006351 (transcription, DNA-templated)
GO:0009507 (chloroplast)
GO:0009536 (plastid)

Homeobox-DDT domain protein RLT2 [UniProtKB/Swiss-Prot: Q9FFH1]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0009908 (flower development)
GO:0045892 (negative regulation of transcription, DNA-templated)
GO:0006351 (transcription, DNA-templated)
GO:0010228 (vegetative to reproductive phase transition of meristem)
GO:0005634 (nucleus)

Genome polyprotein [UniProtKB/Swiss-Prot: Q6XKE6]

GO:0004190 (aspartic-type endopeptidase activity)
GO:0003677 (DNA binding)
GO:0003887 (DNA-directed DNA polymerase activity)
GO:0004519 (endonuclease activity)
GO:0003964 (RNA-directed DNA polymerase activity)
GO:0008270 (zinc ion binding)
GO:0046740 (transport of virus in host, cell to cell)

Zinc finger CCCH domain-containing protein 43 [UniProtKB/Swiss-Prot: Q5Z5Q3]

GO:0003677 (DNA binding)
GO:0046872 (metal ion binding)
GO:0003729 (mRNA binding)
GO:0003743 (translation initiation factor activity)
GO:0016281 (eukaryotic translation initiation factor 4F complex)

Transcription factor TCP20 [UniProtKB/Swiss-Prot: Q9LSD5]

GO:0000987 (cis-regulatory region sequence-specific DNA binding)
GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0043565 (sequence-specific DNA binding)
GO:0009653 (anatomical structure morphogenesis)
GO:1900056 (negative regulation of leaf senescence)
GO:0008361 (regulation of cell size)
GO:0005634 (nucleus)

Ethylene-responsive transcription factor ERF025 [UniProtKB/Swiss-Prot: Q9FJ90]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0050832 (defense response to fungus)
GO:0009873 (ethylene-activated signaling pathway)
GO:0019760 (glucosinolate metabolic process)
GO:0005634 (nucleus)

AP2-like ethylene-responsive transcription factor CRL5 [UniProtKB/Swiss-Prot: Q84Z02]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0048830 (adventitious root development)
GO:0080037 (negative regulation of cytokinin-activated signaling pathway)
GO:0005634 (nucleus)

DNA-directed RNA polymerases I and III subunit rpac1 [UniProtKB/Swiss-Prot: Q54SN4]

GO:0003677 (DNA binding)
GO:0003899 (DNA-directed 5'-3' RNA polymerase activity)
GO:0046983 (protein dimerization activity)
GO:0006360 (transcription by RNA polymerase I)
GO:0006383 (transcription by RNA polymerase III)
GO:0005736 (RNA polymerase I complex)
GO:0005666 (RNA polymerase III complex)

Transcription factor IBH1-like 1 [UniProtKB/Swiss-Prot: Q9M0B9]

GO:0003677 (DNA binding)
GO:0003700 (DNA-binding transcription factor activity)
GO:0046983 (protein dimerization activity)
GO:0009742 (brassinosteroid mediated signaling pathway)
GO:0009740 (gibberellic acid mediated signaling pathway)
GO:0040008 (regulation of growth)
GO:0005634 (nucleus)