Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_12G0399300 | OGI:12070100 | 13/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr12:26836217-26841937 | ||||||||
| Gene Symbol | WAHD1, OsWAHD1 | ||||||||||
| DNA seq | CCTAACTAGAAGGAAGCAGGTGTTGCCATCCTCAACATGAGGGGCCTGAGAAACAAGGCAACTGACATGAACATGAACTCAAGTTTATTTTCACCCAGCTGAGCTGTAGTGCTCCACAACAAAAACAACAGAACTTAACGCAAATCTGCATAACTTGCTGGACACAGCAAGTTTTCAGCTCCACTTACACGTGTAAAAGAATGACAGAAAAGCTCTAATAGTAGTGTGAGAGTGTATAATTGGACAGCCCTAAGTAACCATTACTTTACAATATGGTGCTCAAATCACAAGCTTTTACACGTATATATATATATATATAGTAATGATGGATTTTATCTTTACATATGATTCTTTACCCTATCACCCCCACCATCTAACCTTATATTACATTTCCTGCTATACCTCCTCTTCTGTATTAAATGGCAACTACAAAGCTACAAATCCCATGCCCTTTCAGGCATGTTATTCTCCCACTAGGTGTTACAAATGCTGCCCCCCAATTCTCTCTCTTAATGTCCATGGTCCTGATTATTTCTCTGCTGTCTTCAGGCCACAAAATCATGCAGAAGAGGTGAATGCTCAAACCGTTGCCGTTGATCCATCTGATTCATCGAATCATAGTCCGAAGATGCGACGGTGACACCAAGAGGAGCAGTAGCATTGTAGATGTCATCCTCATTAACACCAGGGAAACCTGGCTGAGCATTAGGAACGAGGTTGCTGCTGGAGTGCTGCAAGCCCAGTGTCAGCGACACATTGCCATTGCCGTATCTCCCAAGCTCTGCCAAGTGATAGGCCATGAACCGGGCGTTCTCGTCTGAGTGCTGCGCGACAGTGTTGTGGAGAAGGAGGCCGCCATCCACTTCGTTCGATCGCTGGTCCTTCAGCATCAGGTTCATGAAACTGTCATCAGGATTGGGCTCATTCTGGAAGCCAACAGGCGCTCCACCAACATTCATTGCTCCAATGCTGGTTCTCGACTCGCTCAATTGGCTTGTTTCGCAAATCCGTGCCCTGGAGTTTTTGAGATCCTCCTTGTCTTCTGAAGATGCCATTTTATCCTTACTTCTTGGTGCATTGTCAGAGGAAGAGTTGGAGTCTTGCTCTAAATCACCAATCTCTTCTTTGTACATGTCTTCAATCATTGGTTTCCAAAGGCGGACACGGGCATTTATGAACCAATTCGAAATCTGGAGAACAGGAGAAGCATGAAGCAGTCAACATGTTGAACTCTTGAAGAAACACAAAATGCTTCTAGGATAAGAAGTTAAAAACATCAAATGTGGATCAATGGTCCAGTGCACAAAAAAGATAAACAATATTTACCTGACTCCTAGTCAGGCCAGTCTGCCTAGCAAGCATTAACTTCTCGGAATCTTTTGGGTACCTGCAAAATTGTTGTGGAGGATGATAAGAGAAAAGAAAAGAGGGAATGCTGGAAAGAACAGCATAAAGGATGAAACTTACGGATGGAGGAAGTGTTCAAACAGCCAAGCGCGAAGAATTGTAACAGAGTTTTCAGGCAGTCCCCTCTGTGGTCTCCAGGCGTTTTGTGGAATCATACCGTACTGTTGGAAAGCACGTTGTTGCCTTAGCTGCTGATCAATGTACCGGAGGCGGGTTAATTTTCCCTCCTTGCCAGATGAGTTCTCTTCCTCGCCAAGCTTTTTCCTGATAACATTGATCTGATCATTGATAGCATCCTTCAGGCACCGAAAGTGCCGTGAGATTGTCTGAAGAGCAACTGCTGTGTAAGGCTTCGCAGATCCTGGTCCAGCTACCACATCAAACGATGAAACCACGGTTTGCATTTGGTGGTAATAATGCTTGTATTTCCGGTCCACCTGAAATATATATTTTTTTGAGTTAAAATGATTTGCCAATCAATTAACTAAGATTACTGTGCTATAAGTAAACTGTATATCTACTCTTGTATACATATACCAAGGATCAGTCCTATAAAACTATTGATACTGTAATCTCAACTCAAAGAAATTGGGGTTGCACTTCTGTTTAAAAAGAAAGAGAAGTACAAAACAATAGACTCCTAGAGTACTCACCTCATCCAACATTGCCATCAGTTTTGCCATTTTGTTCTGAAGCTCTTGCTTCTCAGCAGTGGAAAGCTCAGGTGCTGCATTAGCGCCAGATTCTTGTGGATTAGAAGATACACCCTCACTTTTTGGCCCTCCATCAGTCTCTTTGCCATCTGCTTTTCCTGATTCAACCTTCTCTTTCTGAGCCTTTTGTTTTATGCTCTTCCAAACACTCACGACCTCATCAAGCAGTTCTTGTGCTGCCTTGAGATACCTTGAGTTCCGGATTGCGCGTGAAGCTTCGGACTGCAAATTCTTCATCCGCATGTCTTCCCCTCTAAGGTTGTCATGGTAAGACTGCGGCGTTAACATGTCTGGCTTTATAGACCAGTACGGTAAGGAAGGCGCCATGATTTGTGTGTTCAAGCTCAGAGATAGCCCTTGGCTTTGCATTGATGGAACACTTGATGAGTTGTGATTATTCAGAACACCAAACTCAAGCTGTGAACCAGTGTGGGCATCATCATGGATGAGCTCAGAGCCACTACCCTGTGCTCCATCCATCATATGCATCAACATCTCATTTTTCATATCTTTGACATGGCTGAAAGAGCGTTGACCCTGGTGCGAAGCAAGCATGTCGGACTCCCTTGAAGAGGGGTCTTGTGACATTGCTGACGCATGCCCAGGGCCAGGCATCTCCATGCAATTCTGCTGAGGCTGCAGAATGCCGCTGAACTCCGTATAAGGTCCAGAAGATGGATTGTTCAGATAGAGCAAGTTCCCTAGAGCTGATGACATAGGATAGGATGCACTGCCTGGGTCTCTTGAGTACATGGTCTGCGAGTCTCTTTCGCTACCAGGGCTTGAATAGTAAGTAGCCATCTCGCAATTATAACTACTTATTGCTCGAGATTACTGCAAAAGCATATATGTATATGAAGAACCAGCTTTGACGTTGACTTGATTGATGATTCCAGCAGGACATCAATATTTTGTTATCCAGACTAAACTTGATCCCGTTCAACTTCCCTGCAATTGAGTACATGAAATGGACTGATAAGACACCCCCAAGGAAGTTCAAATATTGAATAAGGAGTTCTCTCCTCTGAGATTGTAAAATAACAGCACACCGATGCCAACAAAAATAACTGCAGGCAAGTGCTTGTAAAGCAGTTCAATGGAAAACTTCAAAACACTTTGCACAAAGACAAGAAAGTTTAATTGAGCAAACTGTTAATATAGATACAGCAGAAGCACACAAAGAATGCCAGTCATAAGTGAGTAATCAGAATTGGGGCTCAGGCTAAGTTTGGCAGGATTCTATCTGATAGAAATGCAGTCACCTGCAAAACTTTGCTCGAGAAGTGCGATAATATATGAACTGACAATGTGACATGCCGATTTGCAGGCTAAAGCCACAAGTGGTCCTCCATTTTTCAGATTGGATCAAAAAAGTTTTGGACTTTGTGGTCCTCCTTTGCTAACAAGATGTTATAAGAATATCTACTTGTGAATTCCTCTTGTTATATACCAAGATAAACAACCGGACAACACCATAAACCAAAATCAAATGACTGCCCAGTGTTTTCTTTTCTTTTCATAAAAGCAACATGGGGAAACCACAGTAGTATCATGAAAAGGAGAATTGCATTGGATAGATAAGGTTTGAACATATGACTCTTGAGTGAGTAATGATCATTTATCATGATGAGTACCTTGTTGAACTAATAGACTGCAACTTCTCAAAGATTCTCTGCCAGGCTGTTATTGCTACGAACACAGCTACCAATCAAAATCTGCAAGAGATGAACTTACTTAGCAGCCTGTTTGTCAGTCTAAACAAATTCTTTTTCATAGCTAGATTTTTAGAGAGTAGAGCCAAAGAGAAAACTCCAAGGCACATGTATAACCTACATACAGAACAAAGAAGCACAAGATTTTGATGAAAAACAAGCAAGATTTCCTTAGCATAAAGTGTCTGGAGTGCAGTAACTCAACAGAAGAACTACTGCAAAAAGGTAAAAGTAACAGGAAATTTGGCTTTTGAGAGCCCAGCTTCCATGAAAACATTTTTTGAAGACTGCTTCCATGTAAACGTCGAGGAAGAAAGGGAAAAAAAAGAAAGAAAGCTAGGACAATTTAGTCGGCAATCGCAAAGCCTGTTCGTACATAAGCTCAAATTATGGGCAAAGCCACAAAAAAGTGGGTTGCTTTACAATCCGAGAAGAAAACAAGAACTCATAATTCGGAGAAAACTAAGCATATGAGTTTTGAACACAAGAATTTCTCCACAAGAATCTATACACCAAAGAAAGGCAAGAACTTTGTTGAGGTTGAGGGCATGGAACCTCAAGGTCAGTCAAAAGAAACAATCTTTGCACCTGAGCTTTCGGTTCATCGAGAAAAACCAGCAGCAAGCAAAAAAAAAAAAATCCCCAAACATCAAAAGAAGCTGAAAAATTCAGATGGAAGGGAAGAGCAGTACCCTAGCTCTCTAACCCAACAAGGCAAGAAGAGCTCAGAAACCCAAGAGAGCCAGCGTTAAGCACCAACCACAAGAGCAAGAAACACACCATAATTCAGTGAAATTCCACCATCATCGAACTGAAGCCAAGAACCAAGAACAGAGGTCATGCATGCAGGTACTCTAATACGCAAGCAATCCGTTGCTGATGATGCTGCAATAAGGAGGAGGAGGAGGAGCAGATGGTACAAGAGAAGGCAATAAGAAAATGGAGGAGAGACCTGAGGGTGTGCTCCTGATGGGGCGCAGGGCAAAGGCAACAGGAACTGCAGCAGCGATTGACACCAAAGCAGCCAGCTGATCTTCTTCAAGATAGATAGATAGGGGAGAGGGGATGAGAGGAGAGGAGAGGAGGGGAGAAAGATAATCGATCCTCCCAATATGGGGACAAAATCAGATCCCAGGATTAAAATAAGTAACAATCCCAAAAGGAAAAGTGAGCAGCAGCCAGCAGCAGCAGCAAGAGAGAGCACAGAGCTCAGAGCTCCTCTCTCTCCTCTTCTTCTCCTCCTTCTCTCCTCTCTCTAGCAAGCAGCAGTTGTGCTAGCTTGCTCCTTGTTGCCTAAATAAAAAAAGCTCAGACCACCCACTAACAGCAGCACCAAATATGGAATAATGTTTGCCTCCTAAAGAAATAGTTTTGCTTGTTCCTTTATTAGTTGCTGTCGAGAAGGATTATACTGACGAGCTAGCTAACCTCCTCCTCCTCCTCCTCCTCTCAACTGTTGCTGCTGCTGCTGATGCTGCTGCTTGGAGTTATTTGCTGGTGTAACCACCACAAGTTTCGGCTACTTGTCGATCCCAGTTGTTTCTTTACGATAAAGCCTATGCCTCCATGCTCCTCCTGCTATATTTAATTAATTTATTATATCTGCATATAAAATTCAGTTTTTTTCTTCAGAAAAATGGAATTATATTAGCATGTACTGTCCTGCACTGCTCTTTATACTAGATCATGTTACCTTGTCTTCAGAGATGGCTATAGGTAGCAGAATAATTAAAAAGAAGATTATTTTTTTTCTTGGCGAAATTAAAAGGGTACTACTACTATATATATAAGAAACAGGAGGGTGATTGAGGCTAATAAGCTACCAGTATAATTCAGACACTGTACAATAGCAATGTAATGGTGCTGCTTAGTGCATGCATTTCGGAGTG
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| CDS seq | ATGGCTACTTACTATTCAAGCCCTGGTAGCGAAAGAGACTCGCAGACCATGTACTCAAGAGACCCAGGCAGTGCATCCTATCCTATGTCATCAGCTCTAGGGAACTTGCTCTATCTGAACAATCCATCTTCTGGACCTTATACGGAGTTCAGCGGCATTCTGCAGCCTCAGCAGAATTGCATGGAGATGCCTGGCCCTGGGCATGCGTCAGCAATGTCACAAGACCCCTCTTCAAGGGAGTCCGACATGCTTGCTTCGCACCAGGGTCAACGCTCTTTCAGCCATGTCAAAGATATGAAAAATGAGATGTTGATGCATATGATGGATGGAGCACAGGGTAGTGGCTCTGAGCTCATCCATGATGATGCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGTTCCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTCCTTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCTTAGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAACTCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAGCATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGACTGATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGCAGCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGATGGCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGTGGTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGCTCTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAATGTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAACCCGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTATGATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCTTCGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAATGCTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCGTGTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGAGCAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTCAGAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAGCGAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGTGGAGCGCCTGTTGGCTTCCAGAATGAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGAAGTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCGGTTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGACACTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGGTGTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTCGGACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCTGCATGATTTTGTGGCCTGA
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| Protein seq | MATYYSSPGSERDSQTMYSRDPGSASYPMSSALGNLLYLNNPSSGPYTEFSGILQPQQNCMEMPGPGHASAMSQDPSSRESDMLASHQGQRSFSHVKDMKNEMLMHMMDGAQGSGSELIHDDAHTGSQLEFGVLNNHNSSSVPSMQSQGLSLSLNTQIMAPSLPYWSIKPDMLTPQSYHDNLRGEDMRMKNLQSEASRAIRNSRYLKAAQELLDEVVSVWKSIKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESGANAAPELSTAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAKPYTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKDKMASSEDKEDLKNSRARICETSQLSESRTSIGAMNVGGAPVGFQNEPNPDDSFMNLMLKDQRSNEVDGGLLLHNTVAQHSDENARFMAYHLAELGRYGNGNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASSDYDSMNQMDQRQRFEHSPLLHDFVA |
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| Function | BEL1-like homeodomain protein 6 [UniProtKB/Swiss-Prot:O65685] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0399300 | OsZS97_12T0399300.1 | Chr12 | 26836217 | 26841937 | - | makerRMon | ||
| CDS seq | ATGGCTACTTACTATTCAAGCCCTGGTAGCGAAAGAGACTCGCAGACCATGTACTCAAGAGACCCAGGCAGTGCATCCTATCCTATGTCATCAGCTCTAGGGAACTTGCTCTATCTGAACAATCCATCTTCTGGACCTTATACGGAGTTCAGCGGCATTCTGCAGCCTCAGCAGAATTGCATGGAGATGCCTGGCCCTGGGCATGCGTCAGCAATGTCACAAGACCCCTCTTCAAGGGAGTCCGACATGCTTGCTTCGCACCAGGGTCAACGCTCTTTCAGCCATGTCAAAGATATGAAAAATGAGATGTTGATGCATATGATGGATGGAGCACAGGGTAGTGGCTCTGAGCTCATCCATGATGATGCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGTTCCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTCCTTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCTTAGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAACTCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAGCATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGACTGATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGCAGCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGATGGCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGTGGTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGCTCTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAATGTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAACCCGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTATGATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCTTCGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAATGCTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCGTGTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGAGCAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTCAGAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAGCGAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGTGGAGCGCCTGTTGGCTTCCAGAATGAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGAAGTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCGGTTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGACACTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGGTGTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTCGGACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCTGCATGATTTTGTGGCCTGA
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| Protein seq | MATYYSSPGSERDSQTMYSRDPGSASYPMSSALGNLLYLNNPSSGPYTEFSGILQPQQNCMEMPGPGHASAMSQDPSSRESDMLASHQGQRSFSHVKDMKNEMLMHMMDGAQGSGSELIHDDAHTGSQLEFGVLNNHNSSSVPSMQSQGLSLSLNTQIMAPSLPYWSIKPDMLTPQSYHDNLRGEDMRMKNLQSEASRAIRNSRYLKAAQELLDEVVSVWKSIKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESGANAAPELSTAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAKPYTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKDKMASSEDKEDLKNSRARICETSQLSESRTSIGAMNVGGAPVGFQNEPNPDDSFMNLMLKDQRSNEVDGGLLLHNTVAQHSDENARFMAYHLAELGRYGNGNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASSDYDSMNQMDQRQRFEHSPLLHDFVA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0399300 | OsZS97_12T0399300.2 | Chr12 | 26836217 | 26841937 | - | makerRMon | ||
| CDS seq | ATGGCTACTTACTATTCAAGCCCTGGTAGCGAAAGAGACTCGCAGACCATGTACTCAAGAGACCCAGGCAGTGCATCCTATCCTATGTCATCAGCTCTAGGGAACTTGCTCTATCTGAACAATCCATCTTCTGGACCTTATACGGAGTTCAGCGGCATTCTGCAGCCTCAGCAGAATTGCATGGAGATGCCTGGCCCTGGGCATGCGTCAGCAATGTCACAAGACCCCTCTTCAAGGGAGTCCGACATGCTTGCTTCGCACCAGGGTCAACGCTCTTTCAGCCATGTCAAAGATATGAAAAATGAGATGTTGATGCATATGATGGATGGAGCACAGGGTAGTGGCTCTGAGCTCATCCATGATGATGCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGTTCCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTCCTTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCTTAGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAACTCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAGCATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGACTGATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGCAGCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGATGGCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGTGGTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGCTCTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAATGTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAACCCGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTATGATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCTTCGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAATGCTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCGTGTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGAGCAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTCAGAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAGCGAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGTGGAGCGCCTGTTGGCTTCCAGAATGAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGAAGTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCGGTTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGACACTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGGTGTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTCGGACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCTGCATGATTTTGTGGCCTGA
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| Protein seq | MATYYSSPGSERDSQTMYSRDPGSASYPMSSALGNLLYLNNPSSGPYTEFSGILQPQQNCMEMPGPGHASAMSQDPSSRESDMLASHQGQRSFSHVKDMKNEMLMHMMDGAQGSGSELIHDDAHTGSQLEFGVLNNHNSSSVPSMQSQGLSLSLNTQIMAPSLPYWSIKPDMLTPQSYHDNLRGEDMRMKNLQSEASRAIRNSRYLKAAQELLDEVVSVWKSIKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESGANAAPELSTAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAKPYTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKDKMASSEDKEDLKNSRARICETSQLSESRTSIGAMNVGGAPVGFQNEPNPDDSFMNLMLKDQRSNEVDGGLLLHNTVAQHSDENARFMAYHLAELGRYGNGNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASSDYDSMNQMDQRQRFEHSPLLHDFVA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0399300 | OsZS97_12T0399300.3 | Chr12 | 26836217 | 26840836 | - | makerRMon | ||
| CDS seq | ATGGCTACTTACTATTCAAGCCCTGGTAGCGAAAGAGACTCGCAGACCATGTACTCAAGAGACCCAGGCAGTGCATCCTATCCTATGTCATCAGCTCTAGGGAACTTGCTCTATCTGAACAATCCATCTTCTGGACCTTATACGGAGTTCAGCGGCATTCTGCAGCCTCAGCAGAATTGCATGGAGATGCCTGGCCCTGGGCATGCGTCAGCAATGTCACAAGACCCCTCTTCAAGGGAGTCCGACATGCTTGCTTCGCACCAGGGTCAACGCTCTTTCAGCCATGTCAAAGATATGAAAAATGAGATGTTGATGCATATGATGGATGGAGCACAGGGTAGTGGCTCTGAGCTCATCCATGATGATGCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGTTCCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTCCTTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCTTAGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAACTCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAGCATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGACTGATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGCAGCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGATGGCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGTGGTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGCTCTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAATGTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAACCCGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTATGATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCTTCGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAATGCTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCGTGTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGAGCAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTCAGAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAGCGAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGTGGAGCGCCTGTTGGCTTCCAGAATGAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGAAGTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCGGTTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGACACTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGGTGTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTCGGACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCTGCATGATTTTGTGGCCTGA
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| Protein seq | MATYYSSPGSERDSQTMYSRDPGSASYPMSSALGNLLYLNNPSSGPYTEFSGILQPQQNCMEMPGPGHASAMSQDPSSRESDMLASHQGQRSFSHVKDMKNEMLMHMMDGAQGSGSELIHDDAHTGSQLEFGVLNNHNSSSVPSMQSQGLSLSLNTQIMAPSLPYWSIKPDMLTPQSYHDNLRGEDMRMKNLQSEASRAIRNSRYLKAAQELLDEVVSVWKSIKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESGANAAPELSTAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAKPYTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKDKMASSEDKEDLKNSRARICETSQLSESRTSIGAMNVGGAPVGFQNEPNPDDSFMNLMLKDQRSNEVDGGLLLHNTVAQHSDENARFMAYHLAELGRYGNGNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASSDYDSMNQMDQRQRFEHSPLLHDFVA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0399300 | OsZS97_12T0399300.4 | Chr12 | 26836217 | 26841937 | - | makerRMon | ||
| CDS seq | ATGGCTACTTACTATTCAAGCCCTGGTAGCGAAAGAGACTCGCAGACCATGTACTCAAGAGACCCAGGCAGTGCATCCTATCCTATGTCATCAGCTCTAGGGAACTTGCTCTATCTGAACAATCCATCTTCTGGACCTTATACGGAGTTCAGCGGCATTCTGCAGCCTCAGCAGAATTGCATGGAGATGCCTGGCCCTGGGCATGCGTCAGCAATGTCACAAGACCCCTCTTCAAGGGAGTCCGACATGCTTGCTTCGCACCAGGGTCAACGCTCTTTCAGCCATGTCAAAGATATGAAAAATGAGATGTTGATGCATATGATGGATGGAGCACAGGGTAGTGGCTCTGAGCTCATCCATGATGATGCCCACACTGGTTCACAGCTTGAGTTTGGTGTTCTGAATAATCACAACTCATCAAGTGTTCCATCAATGCAAAGCCAAGGGCTATCTCTGAGCTTGAACACACAAATCATGGCGCCTTCCTTACCGTACTGGTCTATAAAGCCAGACATGTTAACGCCGCAGTCTTACCATGACAACCTTAGAGGGGAAGACATGCGGATGAAGAATTTGCAGTCCGAAGCTTCACGCGCAATCCGGAACTCAAGGTATCTCAAGGCAGCACAAGAACTGCTTGATGAGGTCGTGAGTGTTTGGAAGAGCATAAAACAAAAGGCTCAGAAAGAGAAGGTTGAATCAGGAAAAGCAGATGGCAAAGAGACTGATGGAGGGCCAAAAAGTGAGGGTGTATCTTCTAATCCACAAGAATCTGGCGCTAATGCAGCACCTGAGCTTTCCACTGCTGAGAAGCAAGAGCTTCAGAACAAAATGGCAAAACTGATGGCAATGTTGGATGAGGTGGACCGGAAATACAAGCATTATTACCACCAAATGCAAACCGTGGTTTCATCGTTTGATGTGGTAGCTGGACCAGGATCTGCGAAGCCTTACACAGCAGTTGCTCTTCAGACAATCTCACGGCACTTTCGGTGCCTGAAGGATGCTATCAATGATCAGATCAATGTTATCAGGAAAAAGCTTGGCGAGGAAGAGAACTCATCTGGCAAGGAGGGAAAATTAACCCGCCTCCGGTACATTGATCAGCAGCTAAGGCAACAACGTGCTTTCCAACAGTACGGTATGATTCCACAAAACGCCTGGAGACCACAGAGGGGACTGCCTGAAAACTCTGTTACAATTCTTCGCGCTTGGCTGTTTGAACACTTCCTCCATCCGTACCCAAAAGATTCCGAGAAGTTAATGCTTGCTAGGCAGACTGGCCTGACTAGGAGTCAGATTTCGAATTGGTTCATAAATGCCCGTGTCCGCCTTTGGAAACCAATGATTGAAGACATGTACAAAGAAGAGATTGGTGATTTAGAGCAAGACTCCAACTCTTCCTCTGACAATGCACCAAGAAGTAAGGATAAAATGGCATCTTCAGAAGACAAGGAGGATCTCAAAAACTCCAGGGCACGGATTTGCGAAACAAGCCAATTGAGCGAGTCGAGAACCAGCATTGGAGCAATGAATGTTGGTGGAGCGCCTGTTGGCTTCCAGAATGAGCCCAATCCTGATGACAGTTTCATGAACCTGATGCTGAAGGACCAGCGATCGAACGAAGTGGATGGCGGCCTCCTTCTCCACAACACTGTCGCGCAGCACTCAGACGAGAACGCCCGGTTCATGGCCTATCACTTGGCAGAGCTTGGGAGATACGGCAATGGCAATGTGTCGCTGACACTGGGCTTGCAGCACTCCAGCAGCAACCTCGTTCCTAATGCTCAGCCAGGTTTCCCTGGTGTTAATGAGGATGACATCTACAATGCTACTGCTCCTCTTGGTGTCACCGTCGCATCTTCGGACTATGATTCGATGAATCAGATGGATCAACGGCAACGGTTTGAGCATTCACCTCTTCTGCATGATTTTGTGGCCTGA
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| Protein seq | MATYYSSPGSERDSQTMYSRDPGSASYPMSSALGNLLYLNNPSSGPYTEFSGILQPQQNCMEMPGPGHASAMSQDPSSRESDMLASHQGQRSFSHVKDMKNEMLMHMMDGAQGSGSELIHDDAHTGSQLEFGVLNNHNSSSVPSMQSQGLSLSLNTQIMAPSLPYWSIKPDMLTPQSYHDNLRGEDMRMKNLQSEASRAIRNSRYLKAAQELLDEVVSVWKSIKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESGANAAPELSTAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAKPYTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKDKMASSEDKEDLKNSRARICETSQLSESRTSIGAMNVGGAPVGFQNEPNPDDSFMNLMLKDQRSNEVDGGLLLHNTVAQHSDENARFMAYHLAELGRYGNGNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASSDYDSMNQMDQRQRFEHSPLLHDFVA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 25.1034165 | 24.5108335 | 5.590181 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0636200 | RBH | 7.146090 | 4.843379 | 5.749708 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g43950 | RBH | 3.456223 | 3.113528 | 1.425117 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0636200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0022140 | RBH | 2.245269 | 78.337639 | 8.570960 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0022220 | RBH | 1.115447 | 23.705503 | 2.925121 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0022580 | RBH | 4.869380 | 94.296974 | 9.399547 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0021550 | RBH | 19.491468 | 52.033257 | 19.874893 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0367000 | RBH | 19.664505 | 60.9555015 | 3.05734 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0021680 | RBH | 1.699059 | 1.858356 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0021920 | RBH | 2.175261 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0021780 | RBH | 26.709549 | 129.799072 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0021880 | RBH | 2.490193 | 0.0 | 2.168118 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G021560 | RBH | 1.078527 | 7.317440 | 5.201275 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0021300 | RBH | 4.794959 | 101.616318 | 11.383911 |
