Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_12G0278000 OGI:12050630 | 15/16 Zhenshan 97 | ZS97RS3 | HZAU Chr12:18907046-18907948
Gene Symbol -
DNA seq

CTAGACAGAACCAACAGCGGAGGGGATCTCTGCAGTCTTGCACCCTATGCTTTGTACTTGGCAATGGAAGCATTTACCTTCCATATGGGTGAGGAACCTCAATCTTCTTGAATGCTCATCTGAGGGGTTGTTGCAGGGATTGAAGGCATGGGGAATTGGAGATTCGCATTTCCTCCACCAGTACTTGGGTTTTACCAAATGCCAATCTGTTGATGGTTGGGAGGCGCTCTGCTCAGAGAGCCGCTGTGCAGTAACTCTTTCAACCCGCCTCTCCTCCCCCAACCTGGAGAACACCGGGGGTTTAAGGCGAGCCTGCAGCGGTAGACGAGATGTAACTGGTGGTTGAACGTCTCTCAACTGGTTAGTCGCTCGAGGAGCTTGACTTTGCAAGATCTTGCTTGGGGGCTGGGAGATTCGAAATGACGGCCGATGCGAAATTGCAGCTGGCTGGGGATCTTTCCTCAGTACAGTGGAGTAAAGCGAGCGATCCATTCTTGAGAGGTCTAGATTTGCAGCTTGACCTGTAGGCTTGGGCAAAAGATTTTGAACTGGAGAAGAAGATGTGGCTTCTCCCAGCTTCAACTGTGAAGTTGATTTTGAAAAGACCAGACGCTGAGCACCCAAATCTGCTGCAAAGGCTTCAGCAGAAGGGGGGATTCTTGTCCCTCGAGCAGGTTGAGCAGCATCAGCTTTGGATTGCTTAGGGAGGAGAGCCCCCATTGAATCGATCAGATCTGAGCTTCCATTGGCGACAAACTCTCCTTCTTCCAACTGGGGAAAACCTGGGACAGCTTGGCAGGTTGGCTGGGGGACACCAAGGTAGAGGAGAAACGCTCGAGGATGGGAGTGGAGAGCGGCAGGAGACGGGCGGCGGCGCGGGTGGGTATCGGGGCCGAGACTCAT

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CDS seq

ATGAGTCTCGGCCCCGATACCCACCCGCGCCGCCGCCCGTCTCCTGCCGCTCTCCACTCCCATCCTCGAGCGTTTCTCCTCTACCTTGGTGTCCCCCAGCCAACCTGCCAAGCTGTCCCAGGTTTTCCCCAGTTGGAAGAAGGAGAGTTTGTCGCCAATGGAAGCTCAGATCTGATCGATTCAATGGGGGCTCTCCTCCCTAAGCAATCCAAAGCTGATGCTGCTCAACCTGCTCGAGGGACAAGAATCCCCCCTTCTGCTGAAGCCTTTGCAGCAGATTTGGGTGCTCAGCGTCTGGTCTTTTCAAAATCAACTTCACAGTTGAAGCTGGGAGAAGCCACATCTTCTTCTCCAGTTCAAAATCTTTTGCCCAAGCCTACAGGTCAAGCTGCAAATCTAGACCTCTCAAGAATGGATCGCTCGCTTTACTCCACTGTACTGAGGAAAGATCCCCAGCCAGCTGCAATTTCGCATCGGCCGTCATTTCGAATCTCCCAGCCCCCAAGCAAGATCTTGCAAAGTCAAGCTCCTCGAGCGACTAACCAGTTGAGAGACGTTCAACCACCAGTTACATCTCGTCTACCGCTGCAGGCTCGCCTTAAACCCCCGGTGTTCTCCAGGTTGGGGGAGGAGAGGCGGGTTGAAAGAGTTACTGCACAGCGGCTCTCTGAGCAGAGCGCCTCCCAACCATCAACAGATTGGCATTTGGTAAAACCCAAGTACTGGTGGAGGAAATGCGAATCTCCAATTCCCCATGCCTTCAATCCCTGCAACAACCCCTCAGATGAGCATTCAAGAAGATTGAGGTTCCTCACCCATATGGAAGGTAAATGCTTCCATTGCCAAGTACAAAGCATAGGGTGCAAGACTGCAGAGATCCCCTCCGCTGTTGGTTCTGTCTAG

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Protein seq

MSLGPDTHPRRRPSPAALHSHPRAFLLYLGVPQPTCQAVPGFPQLEEGEFVANGSSDLIDSMGALLPKQSKADAAQPARGTRIPPSAEAFAADLGAQRLVFSKSTSQLKLGEATSSSPVQNLLPKPTGQAANLDLSRMDRSLYSTVLRKDPQPAAISHRPSFRISQPPSKILQSQAPRATNQLRDVQPPVTSRLPLQARLKPPVFSRLGEERRVERVTAQRLSEQSASQPSTDWHLVKPKYWWRKCESPIPHAFNPCNNPSDEHSRRLRFLTHMEGKCFHCQVQSIGCKTAEIPSAVGSV

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_12G0278000 OsZS97_12T0278000.1 Chr12 18907046 18907948 - makerRMon
CDS seq

ATGAGTCTCGGCCCCGATACCCACCCGCGCCGCCGCCCGTCTCCTGCCGCTCTCCACTCCCATCCTCGAGCGTTTCTCCTCTACCTTGGTGTCCCCCAGCCAACCTGCCAAGCTGTCCCAGGTTTTCCCCAGTTGGAAGAAGGAGAGTTTGTCGCCAATGGAAGCTCAGATCTGATCGATTCAATGGGGGCTCTCCTCCCTAAGCAATCCAAAGCTGATGCTGCTCAACCTGCTCGAGGGACAAGAATCCCCCCTTCTGCTGAAGCCTTTGCAGCAGATTTGGGTGCTCAGCGTCTGGTCTTTTCAAAATCAACTTCACAGTTGAAGCTGGGAGAAGCCACATCTTCTTCTCCAGTTCAAAATCTTTTGCCCAAGCCTACAGGTCAAGCTGCAAATCTAGACCTCTCAAGAATGGATCGCTCGCTTTACTCCACTGTACTGAGGAAAGATCCCCAGCCAGCTGCAATTTCGCATCGGCCGTCATTTCGAATCTCCCAGCCCCCAAGCAAGATCTTGCAAAGTCAAGCTCCTCGAGCGACTAACCAGTTGAGAGACGTTCAACCACCAGTTACATCTCGTCTACCGCTGCAGGCTCGCCTTAAACCCCCGGTGTTCTCCAGGTTGGGGGAGGAGAGGCGGGTTGAAAGAGTTACTGCACAGCGGCTCTCTGAGCAGAGCGCCTCCCAACCATCAACAGATTGGCATTTGGTAAAACCCAAGTACTGGTGGAGGAAATGCGAATCTCCAATTCCCCATGCCTTCAATCCCTGCAACAACCCCTCAGATGAGCATTCAAGAAGATTGAGGTTCCTCACCCATATGGAAGGTAAATGCTTCCATTGCCAAGTACAAAGCATAGGGTGCAAGACTGCAGAGATCCCCTCCGCTGTTGGTTCTGTCTAG

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Protein seq

MSLGPDTHPRRRPSPAALHSHPRAFLLYLGVPQPTCQAVPGFPQLEEGEFVANGSSDLIDSMGALLPKQSKADAAQPARGTRIPPSAEAFAADLGAQRLVFSKSTSQLKLGEATSSSPVQNLLPKPTGQAANLDLSRMDRSLYSTVLRKDPQPAAISHRPSFRISQPPSKILQSQAPRATNQLRDVQPPVTSRLPLQARLKPPVFSRLGEERRVERVTAQRLSEQSASQPSTDWHLVKPKYWWRKCESPIPHAFNPCNNPSDEHSRRLRFLTHMEGKCFHCQVQSIGCKTAEIPSAVGSV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.014451 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g31130 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0013920 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0014090 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0013970 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0013790 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0013440 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0254500 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0013600 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0013920 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0013760 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0013970 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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